Pregenerated sensors for KLHDC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040263Ensembl transcript IDs: ENSMUST00000045884.17, ENSMUST00000174192.2, ENSMUST00000174255.2, ENSMUST00000174665.8, ENSMUST00000174717.8
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTCCGGGACAGGTACTCTTCGAATTGCTCCCCACGGGCCACCTCTaGGTGCTGCGGATCTGCTCCCTCCTCAGCACTGTCCTCCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: SPGQVLFELLPTGHL*VLRICSLLSTVLLV Trigger: GACCAGGAGGACAGTGCTGAGGAGGGAGCAGATCCGCAGCACCCAGAGGTGGCCCGTGGGGAGCAATTCGAAGAGTACCTGTCCCGGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR GCA 90 bp | CGGGACAGGTACTCTTCGAATTGCTCCCCACGGGCCACCTCTGGGTaGTGCGGATCTGCTCCCTCCTCAGCACTGTCCTCCTGGTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: RDRYSSNCSPRATSG*CGSAPSSALSSWSS Trigger: TGAAGACCAGGAGGACAGTGCTGAGGAGGGAGCAGATCCGCAGCACCCAGAGGTGGCCCGTGGGGAGCAATTCGAAGAGTACCTGTCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR GCA 90 bp | TCCTTTGCTTCAGGCCCCACATGGCTCCGGGCCAGCTTCAGCCAGTaGTGCTCAGTCCGGGACAGGTACTCTTCGAATTGCTCCCCACGG | + |
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Preference number: 1 (lower is better) Translates to: SFASGPTWLRASFSQ*CSVRDRYSSNCSPR Trigger: CCGTGGGGAGCAATTCGAAGAGTACCTGTCCCGGACTGAGCAGCACTGGCTGAAGCTGGCCCGGAGCCATGTGGGGCCTGAAGCAAAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR GCA 90 bp | CTCTTCGAATTGCTCCCCACGGGCCACCTCTGGGTGCTGCGGATCTaGTCCCTCCTCAGCACTGTCCTCCTGGTCTTCATCCTCTCCATC | + |
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Preference number: 1 (lower is better) Translates to: LFELLPTGHLWVLRI*SLLSTVLLVFILSI Trigger: GATGGAGAGGATGAAGACCAGGAGGACAGTGCTGAGGAGGGAGCAGATCCGCAGCACCCAGAGGTGGCCCGTGGGGAGCAATTCGAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR GCA 90 bp | GACAGGTACTCTTCGAATTGCTCCCCACGGGCCACCTCTGGGTGCTaGGGATCTGCTCCCTCCTCAGCACTGTCCTCCTGGTCTTCATCC | + |
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Preference number: 1 (lower is better) Translates to: DRYSSNCSPRATSGC*GSAPSSALSSWSSS Trigger: GGATGAAGACCAGGAGGACAGTGCTGAGGAGGGAGCAGATCCGCAGCACCCAGAGGTGGCCCGTGGGGAGCAATTCGAAGAGTACCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR CCA 90 bp | GTGGACAGAAGCCACTGTGAAGTCAGGCTAGCCCCCGTCAGACTGTaGGCACCCAAGGCTCACAGAAGACCACTCTGCAGGGCCTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: VDRSHCEVRLAPVRL*APKAHRRPLCRASS Trigger: TGAGGAGGCCCTGCAGAGTGGTCTTCTGTGAGCCTTGGGTGCCCACAGTCTGACGGGGGCTAGCCTGACTTCACAGTGGCTTCTGTCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| 3UTR GCA 90 bp | GTGCTGCTGGCCTCTGAGGCACTGTCATCAGCCTTAGGTGAGGGCTaGACCCCCAACCCTGAGGGAGTGAGTACTTGCTTAATGGTGACC | + |
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Preference number: 1 (lower is better) Translates to: VLLASEALSSALGEG*TPNPEGVSTCLMVT Trigger: GGTCACCATTAAGCAAGTACTCACTCCCTCAGGGTTGGGGGTGCAGCCCTCACCTAAGGCTGATGACAGTGCCTCAGAGGCCAGCAGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR CCA 90 bp | TGGGCTACTTTCAACACTTTCTTCTCCTTTGCTTCAGGCCCCACATaGCTCCGGGCCAGCTTCAGCCAGTGCTGCTCAGTCCGGGACAGG | + |
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Preference number: 1 (lower is better) Translates to: WATFNTFFSFASGPT*LRASFSQCCSVRDR Trigger: CCTGTCCCGGACTGAGCAGCACTGGCTGAAGCTGGCCCGGAGCCATGTGGGGCCTGAAGCAAAGGAGAAGAAAGTGTTGAAAGTAGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR TCA 90 bp | CACCAGCTTCAAACATGCCGCCATAGACGTACAGCAGTCCATGCTTaGCAGCCAGCATGGCGTTGGAACGAGGGCATGGCTCCTGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: HQLQTCRHRRTAVHA*QPAWRWNEGMAPVQ Trigger: CTGGACAGGAGCCATGCCCTCGTTCCAACGCCATGCTGGCTGTCAAGCATGGACTGCTGTACGTCTATGGCGGCATGTTTGAAGCTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR GCA 90 bp | GCCCCGCCTCCGTTTCTTCTTCTCAGACTTGGGGCCCTTCAGCTGTaGTGCAAACCAGCGACTCTTGGCCGAATCATAGATATACAGGTC | + |
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Preference number: 1 (lower is better) Translates to: APPPFLLLRLGALQL*CKPATLGRIIDIQV Trigger: GACCTGTATATCTATGATTCGGCCAAGAGTCGCTGGTTTGCAGCACAGCTGAAGGGCCCCAAGTCTGAGAAGAAGAAACGGAGGCGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR GCA 90 bp | GCCTTAGGTGAGGGCTGCACCCCCAACCCTGAGGGAGTGAGTACTTaGTTAATGGTGACCACTGTCCCGTCTTCAGACACCACCTCTTTT | + |
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Preference number: 1 (lower is better) Translates to: ALGEGCTPNPEGVST*LMVTTVPSSDTTSF Trigger: AAAAGAGGTGGTGTCTGAAGACGGGACAGTGGTCACCATTAAGCAAGTACTCACTCCCTCAGGGTTGGGGGTGCAGCCCTCACCTAAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR GCA 90 bp | CAGTATCTGATGATTTGGAGCCACAGCCACAGAAAAGCCAGACCTTaGAGTAGGCTTGACCCCCGAAGGGTTAATCCTGGTCCAAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: QYLMIWSHSHRKARP*SRLDPRRVNPGPSP Trigger: TGGGCTTGGACCAGGATTAACCCTTCGGGGGTCAAGCCTACTGCAAGGTCTGGCTTTTCTGTGGCTGTGGCTCCAAATCATCAGATACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR GCA 90 bp | CCGCCTCCGTTTCTTCTTCTCAGACTTGGGGCCCTTCAGCTGTGCTaGAAACCAGCGACTCTTGGCCGAATCATAGATATACAGGTCACT | + |
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Preference number: 1 (lower is better) Translates to: PPPFLLLRLGALQLC*KPATLGRIIDIQVT Trigger: AGTGACCTGTATATCTATGATTCGGCCAAGAGTCGCTGGTTTGCAGCACAGCTGAAGGGCCCCAAGTCTGAGAAGAAGAAACGGAGGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR CCA 90 bp | CTCTTCCTCATCACACACGCCCCCGAAGACCAGTATCTGATGATTTaGAGCCACAGCCACAGAAAAGCCAGACCTTGCAGTAGGCTTGAC | + |
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Preference number: 1 (lower is better) Translates to: LFLITHAPEDQYLMI*SHSHRKARPCSRLD Trigger: GTCAAGCCTACTGCAAGGTCTGGCTTTTCTGTGGCTGTGGCTCCAAATCATCAGATACTGGTCTTCGGGGGCGTGTGTGATGAGGAAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR TCA 90 bp | CTAGTGTCTGGCCTGTGCAATGTCTTGAACTGCATCATCAAAGCATaGTTTTGCCATGGCCTGGGCTACTTTCAACACTTTCTTCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: LVSGLCNVLNCIIKA*FCHGLGYFQHFLLL Trigger: AAGGAGAAGAAAGTGTTGAAAGTAGCCCAGGCCATGGCAAAATCATGCTTTGATGATGCAGTTCAAGACATTGCACAGGCCAGACACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGAGTGAGTACTTGCTTAATGGTGACCACTGTCCCGTCTTCAGACACCACCTCAGGCAGCCTGACCTaGGCGTGGGCCCGGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: EGVSTCLMVTTVPSSDTTSGSLT*AWARGL Trigger: CAGGCCCCGGGCCCACGCCCAGGTCAGGCTGCCTGA...GGTGGTGTCTGAAGACGGGACAGTGGTCACCATTAAGCAAGTACTCACTCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCCGGGCCAGCTTCAGCCAGTGCTGCTCAGTCCGGGACAGGTACTCTTCGAAAGTGCTGCTGGCCTCTaGGGCACTGTCATCAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: APGQLQPVLLSPGQVLFESAAGL*GTVISL Trigger: AAGGCTGATGACAGTGCCTCAGAGGCCAGCAGCACT...TTCGAAGAGTACCTGTCCCGGACTGAGCAGCACTGGCTGAAGCTGGCCCGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR GCA 90 bp | CCACCTCTGGGTGCTGCGGATCTGCTCCCTCCTCAGCACTGTCCTCCTGGTCTTGCCCTTCAGCTGTGCTaGAAACCAGCGACTCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: PPLGAADLLPPQHCPPGLALQLC*KPATLG Trigger: GCCAAGAGTCGCTGGTTTGCAGCACAGCTGAAGGGC...AAGACCAGGAGGACAGTGCTGAGGAGGGAGCAGATCCGCAGCACCCAGAGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCCGGGACAGGTACTCTTCGAATTGCTCCCCACGGGCCACCTCTGGGTGCTGCCTGTCCAGTGCTGCTaGCCTCTGAGGCACTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: SPGQVLFELLPTGHLWVLPVQCC*PLRHCH Trigger: ATGACAGTGCCTCAGAGGCCAGCAGCACTGGACAGG...CAGCACCCAGAGGTGGCCCGTGGGGAGCAATTCGAAGAGTACCTGTCCCGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR TCA 90 bp | GCCACTCCTGGGATTTCGGATCCATCTCCACCAAGGTTTTCCACTCTTCCATCTCGTGGGCCCGGGGCCTaGTGGGGACAGCTTGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: ATPGISDPSPPRFSTLPSRGPGA*WGQLAP Trigger: TGGAGCAAGCTGTCCCCATCAGGCCCCGGGCCCACG...AGATGGAAGAGTGGAAAACCTTGGTGGAGATGGATCCGAAATCCCAGGAGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR CCA 90 bp | CCACCTCTGGGTGCTGCGGATCTGCTCCCTCCTCAGCACTGTCCTCCTGGTCTTGACAGCTTGCTCCACTaGAAGGTGTCCAGGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: PPLGAADLLPPQHCPPGLDSLLH*KVSRLK Trigger: CTTCAGCCTGGACACCTTCCAGTGGAGCAAGCTGTC...AAGACCAGGAGGACAGTGCTGAGGAGGGAGCAGATCCGCAGCACCCAGAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCCGGGACAGGTACTCTTCGAATTGCTCCCCACGGGCCACCTCTGGGTGCTGGGAAGGTGTCCAGGCTaGAGGTGTACACATCACTGT | + |
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Preference number: 2 (lower is better) Translates to: SPGQVLFELLPTGHLWVLGRCPG*RCTHHC Trigger: ACAGTGATGTGTACACCTTCAGCCTGGACACCTTCC...CAGCACCCAGAGGTGGCCCGTGGGGAGCAATTCGAAGAGTACCTGTCCCGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCCGGGACAGGTACTCTTCGAATTGCTCCCCACGGGCCACCTCTGGGTGCTGAGATATACAGGTCACTaGAGAAGGAGCCCTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SPGQVLFELLPTGHLWVLRYTGH*RRSPPG Trigger: GCCTGGAGGGCTCCTTCTTCAGTGACCTGTATATCT...CAGCACCCAGAGGTGGCCCGTGGGGAGCAATTCGAAGAGTACCTGTCCCGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCCGGGACAGGTACTCTTCGAATTGCTCCCCACGGGCCACCTCTGGGTGCTGCAGTCTCCTGTTCAGTaGTGCCTTCAGGATCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SPGQVLFELLPTGHLWVLQSPVQ*CLQDPL Trigger: CAGAGGATCCTGAAGGCACCACTGAACAGGAGACTG...CAGCACCCAGAGGTGGCCCGTGGGGAGCAATTCGAAGAGTACCTGTCCCGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR GCA 90 bp | CCGCCTCCGTTTCTTCTTCTCAGACTTGGGGCCCTTCAGCTGTGCTGCAAACCATGGTCCAAGCCCATTTaGCTTCTCCCCCTTCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: PPPFLLLRLGALQLCCKPWSKPI*LLPLPQ Trigger: CTGCGGAAGGGGGAGAAGGCAAATGGGCTTGGACCA...TGGTTTGCAGCACAGCTGAAGGGCCCCAAGTCTGAGAAGAAGAAACGGAGGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR GCA 90 bp | CCACCTCTGGGTGCTGCGGATCTGCTCCCTCCTCAGCACTGTCCTCCTGGTCTTGTAGATGTAGTCCCTTaGACTTTCATGGAAGCCACC | + |
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Preference number: 2 (lower is better) Translates to: PPLGAADLLPPQHCPPGLVDVVP*TFMEAT Trigger: GGTGGCTTCCATGAAAGTGCAAGGGACTACATCTAC...AAGACCAGGAGGACAGTGCTGAGGAGGGAGCAGATCCGCAGCACCCAGAGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGACGTACAGCAGTCCATGCTTGACAGCCAGCATGGCGTTGGAACGAGGGCATGTCTGAGTGCTGGGTaGCTTTGTCCACATCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: IDVQQSMLDSQHGVGTRACLSAG*LCPHLS Trigger: AGAAAGATGTGGACAAAGGCACCCAGCACTCAGACA...TGCCCTCGTTCCAACGCCATGCTGGCTGTCAAGCATGGACTGCTGTACGTCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR TCA 90 bp | CCGCCTCCGTTTCTTCTTCTCAGACTTGGGGCCCTTCAGCTGTGCTGCAAACCATGTCCACATCTTTCTTaGCTCTCTGCTTTGAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: PPPFLLLRLGALQLCCKPCPHLS*LSALSN Trigger: GTTACTCAAAGCAGAGAGTCAAGAAAGATGTGGACA...TGGTTTGCAGCACAGCTGAAGGGCCCCAAGTCTGAGAAGAAGAAACGGAGGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR CCA 90 bp | GCGACTCTTGGCCGAATCATAGATATACAGGTCACTGAAGAAGGAGCCCTCCAGAACATGTCTGAGTGCTaGGTGCCTTTGTCCACATCT | + |
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Preference number: 2 (lower is better) Translates to: ATLGRIIDIQVTEEGALQNMSEC*VPLSTS Trigger: AGATGTGGACAAAGGCACCCAGCACTCAGACATGTT...CTGGAGGGCTCCTTCTTCAGTGACCTGTATATCTATGATTCGGCCAAGAGTCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGTCCCGTCTTCAGACACCACCTCTTTTATCACCTCCAGTGGCTCTGGGGCACAGTATCTGATGATTTaGAGCCACAGCCACAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: TVPSSDTTSFITSSGSGAQYLMI*SHSHRK Trigger: TTTTCTGTGGCTGTGGCTCCAAATCATCAGATACTG...TGCCCCAGAGCCACTGGAGGTGATAAAAGAGGTGGTGTCTGAAGACGGGACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR GCA 72 bp | TTGCTCCCCACGGGCCACCTCTGGGTGCTGCGGATCTaGTCCCTCCTCAGCACTGTCCTCCTGGTCTTCATC | + |
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Preference number: 3 (lower is better) Translates to: LLPTGHLWVLRI*SLLSTVLLVFI Trigger: GATGAAGACCAGGAGGACAGTGCTGAGGAGGGAGCAGATCCGCAGCACCCAGAGGTGGCCCGTGGGGAGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR GCA 72 bp | GGCCCCACATGGCTCCGGGCCAGCTTCAGCCAGTGCTaGTCAGTCCGGGACAGGTACTCTTCGAATTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: GPTWLRASFSQC*SVRDRYSSNCS Trigger: GGAGCAATTCGAAGAGTACCTGTCCCGGACTGAGCAGCACTGGCTGAAGCTGGCCCGGAGCCATGTGGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR GCA 72 bp | TCAGGCCCCACATGGCTCCGGGCCAGCTTCAGCCAGTaGTGCTCAGTCCGGGACAGGTACTCTTCGAATTGC | + |
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Preference number: 3 (lower is better) Translates to: SGPTWLRASFSQ*CSVRDRYSSNC Trigger: GCAATTCGAAGAGTACCTGTCCCGGACTGAGCAGCACTGGCTGAAGCTGGCCCGGAGCCATGTGGGGCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR CCA 72 bp | CAGGTACTCTTCGAATTGCTCCCCACGGGCCACCTCTaGGTGCTGCGGATCTGCTCCCTCCTCAGCACTGTC | + |
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Preference number: 3 (lower is better) Translates to: QVLFELLPTGHL*VLRICSLLSTV Trigger: GACAGTGCTGAGGAGGGAGCAGATCCGCAGCACCCAGAGGTGGCCCGTGGGGAGCAATTCGAAGAGTACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR CCA 72 bp | AGCCACTGTGAAGTCAGGCTAGCCCCCGTCAGACTGTaGGCACCCAAGGCTCACAGAAGACCACTCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SHCEVRLAPVRL*APKAHRRPLCR Trigger: CCTGCAGAGTGGTCTTCTGTGAGCCTTGGGTGCCCACAGTCTGACGGGGGCTAGCCTGACTTCACAGTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| 3UTR-3UTR CAA 90 bp | CCACCTCTGGGTGCTGCGGATCTGCTCCCTCCTCAGCACTGTCCTCCTGGTCTTTACAGCAGTCCATGCTaGACAGCCAGCATGGCGTTG | + |
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Preference number: 3 (lower is better) Translates to: PPLGAADLLPPQHCPPGLYSSPC*TASMAL Trigger: CAACGCCATGCTGGCTGTCAAGCATGGACTGCTGTA...AAGACCAGGAGGACAGTGCTGAGGAGGGAGCAGATCCGCAGCACCCAGAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR CAA 90 bp | CCACCTCTGGGTGCTGCGGATCTGCTCCCTCCTCAGCACTGTCCTCCTGGTCTTTTCTTCTTCTCAGACTaGGGGCCCTTCAGCTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: PPLGAADLLPPQHCPPGLFFFSD*GPFSCA Trigger: AGCACAGCTGAAGGGCCCCAAGTCTGAGAAGAAGAA...AAGACCAGGAGGACAGTGCTGAGGAGGGAGCAGATCCGCAGCACCCAGAGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR GCA 72 bp | TCTCCTGTTCAGTGGTGCCTTCAGGATCCTCTGCCTTaGCCCGCCTCCGTTTCTTCTTCTCAGACTTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: SPVQWCLQDPLP*PASVSSSQTWG Trigger: GCCCCAAGTCTGAGAAGAAGAAACGGAGGCGGGGCAAGGCAGAGGATCCTGAAGGCACCACTGAACAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR GCA 72 bp | GCCTCTGAGGCACTGTCATCAGCCTTAGGTGAGGGCTaGACCCCCAACCCTGAGGGAGTGAGTACTTGCTTA | + |
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Preference number: 3 (lower is better) Translates to: ASEALSSALGEG*TPNPEGVSTCL Trigger: TAAGCAAGTACTCACTCCCTCAGGGTTGGGGGTGCAGCCCTCACCTAAGGCTGATGACAGTGCCTCAGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR CCA 72 bp | CTCACAGAAGACCACTCTGCAGGGCCTCCTCACTCCTaGCTCGACACCAGTGATGGTGAAACCATTGCGCAG | + |
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Preference number: 3 (lower is better) Translates to: LTEDHSAGPPHS*LDTSDGETIAQ Trigger: CTGCGCAATGGTTTCACCATCACTGGTGTCGAGCCAGGAGTGAGGAGGCCCTGCAGAGTGGTCTTCTGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| 3UTR TCA 72 bp | CAAACATGCCGCCATAGACGTACAGCAGTCCATGCTTaGCAGCCAGCATGGCGTTGGAACGAGGGCATGGCT | + |
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Preference number: 3 (lower is better) Translates to: QTCRHRRTAVHA*QPAWRWNEGMA Trigger: AGCCATGCCCTCGTTCCAACGCCATGCTGGCTGTCAAGCATGGACTGCTGTACGTCTATGGCGGCATGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR CCA 72 bp | TTCAACACTTTCTTCTCCTTTGCTTCAGGCCCCACATaGCTCCGGGCCAGCTTCAGCCAGTGCTGCTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: FNTFFSFASGPT*LRASFSQCCSV Trigger: GACTGAGCAGCACTGGCTGAAGCTGGCCCGGAGCCATGTGGGGCCTGAAGCAAAGGAGAAGAAAGTGTTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR CAA 90 bp | ACTGTCCCGTCTTCAGACACCACCTCTTTTATCACCTCCAGTGGCTCTGGGGCAGACCTTGCAGTAGGCTaGACCCCCGAAGGGTTAATC | + |
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Preference number: 3 (lower is better) Translates to: TVPSSDTTSFITSSGSGADLAVG*TPEGLI Trigger: GATTAACCCTTCGGGGGTCAAGCCTACTGCAAGGTC...TGCCCCAGAGCCACTGGAGGTGATAAAAGAGGTGGTGTCTGAAGACGGGACAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR GCA 72 bp | CCCCCTTCCGCAGGCTTCAGCAGGAACATGTCTGAGTaGTGGGTGCCTTTGTCCACATCTTTCTTGACTCTC | + |
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Preference number: 3 (lower is better) Translates to: PPSAGFSRNMSE*WVPLSTSFLTL Trigger: GAGAGTCAAGAAAGATGTGGACAAAGGCACCCAGCACTCAGACATGTTCCTGCTGAAGCCTGCGGAAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR CCA 72 bp | CCTTCCGCAGGCTTCAGCAGGAACATGTCTGAGTGCTaGGTGCCTTTGTCCACATCTTTCTTGACTCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: PSAGFSRNMSEC*VPLSTSFLTLC Trigger: GCAGAGAGTCAAGAAAGATGTGGACAAAGGCACCCAGCACTCAGACATGTTCCTGCTGAAGCCTGCGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR TCA 72 bp | ATGGGGACAGCTTGCTCCACTGGAAGGTGTCCAGGCTaGAGGTGTACACATCACTGTAGTAGATGTAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: MGTACSTGRCPG*RCTHHCSRCSP Trigger: GGGACTACATCTACTACAGTGATGTGTACACCTTCAGCCTGGACACCTTCCAGTGGAGCAAGCTGTCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR CCA 72 bp | ATCACACACGCCCCCGAAGACCAGTATCTGATGATTTaGAGCCACAGCCACAGAAAAGCCAGACCTTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: ITHAPEDQYLMI*SHSHRKARPCS Trigger: ACTGCAAGGTCTGGCTTTTCTGTGGCTGTGGCTCCAAATCATCAGATACTGGTCTTCGGGGGCGTGTGTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| 3UTR-3UTR CAA 90 bp | ATAGACGTACAGCAGTCCATGCTTGACAGCCAGCATGGCGTTGGAACGAGGGCACCAGTATCTGATGATTaGGAGCCACAGCCACAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: IDVQQSMLDSQHGVGTRAPVSDD*EPQPQK Trigger: TTTCTGTGGCTGTGGCTCCAAATCATCAGATACTGG...TGCCCTCGTTCCAACGCCATGCTGGCTGTCAAGCATGGACTGCTGTACGTCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGCATGATTTTGCCATGGCCTGGGCTACTTTCAACACTTTCTTCTCCTTTGTCAGGATCCTCTGCCTaGCCCCGCCTCCGTTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QSMILPWPGLLSTLSSPLSGSSA*PRLRFF Trigger: GAAGAAACGGAGGCGGGGCAAGGCAGAGGATCCTGA...CAAAGGAGAAGAAAGTGTTGAAAGTAGCCCAGGCCATGGCAAAATCATGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
||
| 3UTR TCA 72 bp | TTAACCGTGGGGAGGGTGGAGGACATGGTGTTTCTGTaGCCTGGGTCTTTTTGGCATCCAAGGTCTGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LTVGRVEDMVFL*PGSFWHPRSGN Trigger: ATTTCCAGACCTTGGATGCCAAAAAGACCCAGGTCACAGAAACACCATGTCCTCCACCCTCCCCACGGTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174255.2 |
||
| 3UTR TCA 72 bp | GGTGCCTTTGTCCACATCTTTCTTGACTCTCTGCTTTaGGTAACCTCCATAGATGGCTATGCTGCCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GAFVHIFLDSLL*VTSIDGYAALG Trigger: CCCCAGGGCAGCATAGCCATCTATGGAGGTTACTCAAAGCAGAGAGTCAAGAAAGATGTGGACAAAGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
||
| 3UTR CCA 72 bp | CAGCCCAGTTTTATTATGACAGAAGCACACAGCCTGTaGGCCTCAAATTCACATCCCACTCTAACCCTCGTT | + |
|
Preference number: 3 (lower is better) Translates to: QPSFIMTEAHSL*ASNSHPTLTLV Trigger: AACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGCTTCTGTCATAATAAAACTGGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| 3UTR TCA 72 bp | GGCCTGTGCAATGTCTTGAACTGCATCATCAAAGCATaGTTTTGCCATGGCCTGGGCTACTTTCAACACTTT | + |
|
Preference number: 3 (lower is better) Translates to: GLCNVLNCIIKA*FCHGLGYFQHF Trigger: AAAGTGTTGAAAGTAGCCCAGGCCATGGCAAAATCATGCTTTGATGATGCAGTTCAAGACATTGCACAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
||
| 3UTR TCA 72 bp | AAAGAAAACCTTAGAGCACACAGCCCAGTTTTATTATaGCAGAAGCACACAGCCTGTGGGCCTCAAATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: KENLRAHSPVLL*QKHTACGPQIH Trigger: GTGAATTTGAGGCCCACAGGCTGTGTGCTTCTGTCATAATAAAACTGGGCTGTGTGCTCTAAGGTTTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR TCA 90 bp | CCATCAGGCAGCCTGACCTGGGCGTGGGCCCGGGGCCTGATGGGGACAGCTTGCTCTGGAAATGGGCTATaGGGGCCTCCAGGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSGSLTWAWARGLMGTACSGNGL*GPPGLP Trigger: AGGAAGACCTGGAGGCCCTCATAGCCCATTTCCAGA...GCAAGCTGTCCCCATCAGGCCCCGGGCCCACGCCCAGGTCAGGCTGCCTGATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
||
| CDS-3UTR TCA 90 bp | CACGTGGACAGAAGCCACTGTGAAGTCAGGCTAGCCCCCGTCAGACTGTGGGCACGTGGGCCCGGGGCCTaGTGGGGACAGCTTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HVDRSHCEVRLAPVRLWARGPGA*WGQLAP Trigger: TGGAGCAAGCTGTCCCCATCAGGCCCCGGGCCCACG...TGCCCACAGTCTGACGGGGGCTAGCCTGACTTCACAGTGGCTTCTGTCCACGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR GCA 90 bp | AGCCCCCGTCAGACTGTGGGCACCCAAGGCTCACAGAAGACCACTCTGCAGGGCGCCACCTCTGGGTGCTaGGGATCTGCTCCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPRQTVGTQGSQKTTLQGATSGC*GSAPSS Trigger: TGAGGAGGGAGCAGATCCGCAGCACCCAGAGGTGGC...GCCCTGCAGAGTGGTCTTCTGTGAGCCTTGGGTGCCCACAGTCTGACGGGGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR CCA 90 bp | CCCTCGTTCCACGTGGACAGAAGCCACTGTGAAGTCAGGCTAGCCCCCGTCAGACCCACGGGCCACCTCTaGGTGCTGCGGATCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSFHVDRSHCEVRLAPVRPTGHL*VLRICS Trigger: GGAGCAGATCCGCAGCACCCAGAGGTGGCCCGTGGG...TCTGACGGGGGCTAGCCTGACTTCACAGTGGCTTCTGTCCACGTGGAACGAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| 3UTR CAA 72 bp | CCAGTGCTGCTCAGTCCGGGACAGGTACTCTTCGAATaGCTCCCCACGGGCCACCTCTGGGTGCTGCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PVLLSPGQVLFE*LPTGHLWVLRI Trigger: GATCCGCAGCACCCAGAGGTGGCCCGTGGGGAGCAATTCGAAGAGTACCTGTCCCGGACTGAGCAGCACTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGGCCTCAAATTCACATCCCACTCTAACCCTCGTTCCACGTGGACAGAATCAGGCAGCCTGACCTaGGCGTGGGCCCGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVGLKFTSHSNPRSTWTESGSLT*AWARGL Trigger: CAGGCCCCGGGCCCACGCCCAGGTCAGGCTGCCTGA...TTCTGTCCACGTGGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR CCA 90 bp | AGCCCCCGTCAGACTGTGGGCACCCAAGGCTCACAGAAGACCACTCTGCAGGGCCCTGTCCAGTGCTGCTaGCCTCTGAGGCACTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPRQTVGTQGSQKTTLQGPVQCC*PLRHCH Trigger: ATGACAGTGCCTCAGAGGCCAGCAGCACTGGACAGG...GCCCTGCAGAGTGGTCTTCTGTGAGCCTTGGGTGCCCACAGTCTGACGGGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR GCA 90 bp | AGGCTAGCCCCCGTCAGACTGTGGGCACCCAAGGCTCACAGAAGACCACTCTGCGTCTTGGTGGCCAAGTaGAGGACCCAGAGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLAPVRLWAPKAHRRPLCVLVAK*RTQRSL Trigger: CAAGGACCTCTGGGTCCTGCACTTGGCCACCAAGAC...GCAGAGTGGTCTTCTGTGAGCCTTGGGTGCCCACAGTCTGACGGGGGCTAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR GCA 90 bp | CTAGCCCCCGTCAGACTGTGGGCACCCAAGGCTCACAGAAGACCACTCTGCAGGTGGTCCAAGCCCATTTaGCTTCTCCCCCTTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAPVRLWAPKAHRRPLCRWSKPI*LLPLPQ Trigger: CTGCGGAAGGGGGAGAAGGCAAATGGGCTTGGACCA...CCTGCAGAGTGGTCTTCTGTGAGCCTTGGGTGCCCACAGTCTGACGGGGGCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR GCA 90 bp | CCCTCGTTCCACGTGGACAGAAGCCACTGTGAAGTCAGGCTAGCCCCCGTCAGAGCCTTCAGGATCCTCTaGCTTGCCCCGCCTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSFHVDRSHCEVRLAPVRAFRIL*LAPPPF Trigger: AAACGGAGGCGGGGCAAGGCAGAGGATCCTGAAGGC...TCTGACGGGGGCTAGCCTGACTTCACAGTGGCTTCTGTCCACGTGGAACGAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR CCA 90 bp | CAGGCTAGCCCCCGTCAGACTGTGGGCACCCAAGGCTCACAGAAGACCACTCTGGTTCCCAGGTCTTGGTaGCCAAGTGCAGGACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QASPRQTVGTQGSQKTTLVPRSW*PSAGPR Trigger: TCTGGGTCCTGCACTTGGCCACCAAGACCTGGGAAC...CAGAGTGGTCTTCTGTGAGCCTTGGGTGCCCACAGTCTGACGGGGGCTAGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR TCA 90 bp | AGGCTAGCCCCCGTCAGACTGTGGGCACCCAAGGCTCACAGAAGACCACTCTGCTCTGGAAATGGGCTATaGGGGCCTCCAGGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLAPVRLWAPKAHRRPLCSGNGL*GPPGLP Trigger: AGGAAGACCTGGAGGCCCTCATAGCCCATTTCCAGA...GCAGAGTGGTCTTCTGTGAGCCTTGGGTGCCCACAGTCTGACGGGGGCTAGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR TCA 90 bp | GCACACAGCCTGTGGGCCTCAAATTCACATCCCACTCTAACCCTCGTTCCACGTTGCTGCCCTGGGGAGTaGCAGCCATCAGGCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AHSLWASNSHPTLTLVPRCCPGE*QPSGSL Trigger: CAGGCTGCCTGATGGCTGTCACTCCCCAGGGCAGCA...ACGTGGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR GCA 90 bp | AGCACACAGCCTGTGGGCCTCAAATTCACATCCCACTCTAACCCTCGTTCCACGCCGAAGACCCACAGCTaGCCACCACCCTGGGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: STQPVGLKFTSHSNPRSTPKTHS*PPPWGT Trigger: GGTACCCCAGGGTGGTGGGCAGCTGTGGGTCTTCGG...CGTGGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR GCA 90 bp | CCGCAGGCTTCAGCAGGAACATGTCTGAGTGCTGGGTGCCTTTGTCCACATCTTCCGAAGACCCACAGCTaGCCACCACCCTGGGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: PQASAGTCLSAGCLCPHLPKTHS*PPPWGT Trigger: GGTACCCCAGGGTGGTGGGCAGCTGTGGGTCTTCGG...AAGATGTGGACAAAGGCACCCAGCACTCAGACATGTTCCTGCTGAAGCCTGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
||
| CDS-3UTR CCA 90 bp | CACGTGGACAGAAGCCACTGTGAAGTCAGGCTAGCCCCCGTCAGACTGTGGGCAACAGCGCCTGGGAGGTaGGCCAGGGATGTCAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: HVDRSHCEVRLAPVRLWATAPGR*ARDVNF Trigger: AAAGTTGACATCCCTGGCCCACCTCCCAGGCGCTGT...TGCCCACAGTCTGACGGGGGCTAGCCTGACTTCACAGTGGCTTCTGTCCACGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR CCA 90 bp | CACGTGGACAGAAGCCACTGTGAAGTCAGGCTAGCCCCCGTCAGACTGTGGGCATCTGTTCCCAGGTCTTaGTGGCCAAGTGCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: HVDRSHCEVRLAPVRLWASVPRS*WPSAGP Trigger: GGGTCCTGCACTTGGCCACCAAGACCTGGGAACAGA...TGCCCACAGTCTGACGGGGGCTAGCCTGACTTCACAGTGGCTTCTGTCCACGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| 3UTR CAA 72 bp | TCTGCCTTGCCCCGCCTCCGTTTCTTCTTCTCAGACTaGGGGCCCTTCAGCTGTGCTGCAAACCAGCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: SALPRLRFFFSD*GPFSCAANQRL Trigger: GAGTCGCTGGTTTGCAGCACAGCTGAAGGGCCCCAAGTCTGAGAAGAAGAAACGGAGGCGGGGCAAGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
||
| 3UTR CAA 72 bp | ACGTACAGCAGTCCATGCTTGACAGCCAGCATGGCGTaGGAACGAGGGCATGGCTCCTGTCCAGTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TYSSPCLTASMA*ERGHGSCPVLL Trigger: CAGCAGCACTGGACAGGAGCCATGCCCTCGTTCCAACGCCATGCTGGCTGTCAAGCATGGACTGCTGTACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| CDS-3UTR GCA 90 bp | CCTGTTCAGTGGTGCCTTCAGGATCCTCTGCCTTGCCCCGCCTCCGTTTCTTCTGTCTTGGTGGCCAAGTaGAGGACCCAGAGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PVQWCLQDPLPCPASVSSVLVAK*RTQRSL Trigger: CAAGGACCTCTGGGTCCTGCACTTGGCCACCAAGAC...AGAAGAAACGGAGGCGGGGCAAGGCAGAGGATCCTGAAGGCACCACTGAACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| CDS-3UTR GCA 90 bp | CACTCTGCAGGGCCTCCTCACTCCTGGCTCGACACCAGTGATGGTGAAACCATTCAGGCCACCATCCGATaGCCGCTTCGACCTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSAGPPHSWLDTSDGETIQATIR*PLRPEG Trigger: TCCTTCAGGTCGAAGCGGGCATCGGATGGTGGCCTG...AATGGTTTCACCATCACTGGTGTCGAGCCAGGAGTGAGGAGGCCCTGCAGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR GCA 90 bp | GGCTCACAGAAGACCACTCTGCAGGGCCTCCTCACTCCTGGCTCGACACCAGTGTCTCCTGTTCAGTGGTaGCTTCAGGATCCTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSQKTTLQGLLTPGSTPVSPVQW*LQDPLP Trigger: AGGCAGAGGATCCTGAAGGCACCACTGAACAGGAGA...CACTGGTGTCGAGCCAGGAGTGAGGAGGCCCTGCAGAGTGGTCTTCTGTGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CCA 90 bp | CACTCTGCAGGGCCTCCTCACTCCTGGCTCGACACCAGTGATGGTGAAACCATTCCTTCTTCTCCATCTTaGCGGCCGTCTTCTCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HSAGPPHSWLDTSDGETIPSSPS*RPSSPR Trigger: GCGCGGAGAAGACGGCCGCCAAGATGGAGAAGAAGG...AATGGTTTCACCATCACTGGTGTCGAGCCAGGAGTGAGGAGGCCCTGCAGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR CCA 90 bp | CACGTGGACAGAAGCCACTGTGAAGTCAGGCTAGCCCCCGTCAGACTGTGGGCACCTTCCGCGAGCGCTTaGACACCTTCTTCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HVDRSHCEVRLAPVRLWAPSASA*TPSSPS Trigger: AGATGGAGAAGAAGGTGTCCAAGCGCTCGCGGAAGG...TGCCCACAGTCTGACGGGGGCTAGCCTGACTTCACAGTGGCTTCTGTCCACGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CCA 90 bp | GCCCCCGTCAGACTGTGGGCACCCAAGGCTCACAGAAGACCACTCTGCAGGGCCGGTGTTTCTGTGACCTaGGTCTTTTTGGCATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: APVRLWAPKAHRRPLCRAGVSVT*VFLASK Trigger: CTTGGATGCCAAAAAGACCCAGGTCACAGAAACACC...GGCCCTGCAGAGTGGTCTTCTGTGAGCCTTGGGTGCCCACAGTCTGACGGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR GCA 90 bp | CACTCTGCAGGGCCTCCTCACTCCTGGCTCGACACCAGTGATGGTGAAACCATTAGCTTCAGCCAGTGCTaGTCAGTCCGGGACAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HSAGPPHSWLDTSDGETISFSQC*SVRDRY Trigger: GTACCTGTCCCGGACTGAGCAGCACTGGCTGAAGCT...AATGGTTTCACCATCACTGGTGTCGAGCCAGGAGTGAGGAGGCCCTGCAGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCTTTTTGGCATCCAAGGTCTGGAAATGGGCTATGAGGGCCTCCAGGTCCCTTCTTCTCCATCTTaGCGGCCGTCTTCTCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLFGIQGLEMGYEGLQVPSSPS*RPSSPR Trigger: GCGCGGAGAAGACGGCCGCCAAGATGGAGAAGAAGG...GACCTGGAGGCCCTCATAGCCCATTTCCAGACCTTGGATGCCAAAAAGACCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174255.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTTCAGTGGTGCCTTCAGGATCCTCTGCCTTGCCCCGCCTCCGTTTCTTCTGGAGGGTGGAGGACATaGTGTTTCTGTGACCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVQWCLQDPLPCPASVSSGGWRT*CFCDLG Trigger: ACCCAGGTCACAGAAACACCATGTCCTCCACCCTCC...AGAAGAAACGGAGGCGGGGCAAGGCAGAGGATCCTGAAGGCACCACTGAACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
||
| CDS-3UTR CCA 90 bp | AGCACACAGCCTGTGGGCCTCAAATTCACATCCCACTCTAACCCTCGTTCCACGCAGCCAGCATGGCGTTaGAACGAGGGCATGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STQPVGLKFTSHSNPRSTQPAWR*NEGMAP Trigger: AGGAGCCATGCCCTCGTTCCAACGCCATGCTGGCTG...CGTGGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR TCA 90 bp | AGGCTAGCCCCCGTCAGACTGTGGGCACCCAAGGCTCACAGAAGACCACTCTGCGACATGGTGTTTCTGTaGCCTGGGTCTTTTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLAPVRLWAPKAHRRPLCDMVFL*PGSFWH Trigger: ATGCCAAAAAGACCCAGGTCACAGAAACACCATGTC...GCAGAGTGGTCTTCTGTGAGCCTTGGGTGCCCACAGTCTGACGGGGGCTAGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR TCA 90 bp | ACATCCCACTCTAACCCTCGTTCCACGTGGACAGAAGCCACTGTGAAGTCAGGCAGTGCTGCTGGCCTCTaGGGCACTGTCATCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSHSNPRSTWTEATVKSGSAAGL*GTVISL Trigger: AAGGCTGATGACAGTGCCTCAGAGGCCAGCAGCACT...GCCTGACTTCACAGTGGCTTCTGTCCACGTGGAACGAGGGTTAGAGTGGGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR TCA 90 bp | CCTGTGGGCCTCAAATTCACATCCCACTCTAACCCTCGTTCCACGTGGACAGAAGCTGCTGTCCTCTTCTaGGTCCGACTCCTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVGLKFTSHSNPRSTWTEAAVLF*VRLLQP Trigger: TGGCTGGAGGAGTCGGACTCAGAAGAGGACAGCAGC...TTCTGTCCACGTGGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR GCA 90 bp | AGAAGCACACAGCCTGTGGGCCTCAAATTCACATCCCACTCTAACCCTCGTTCCATGGCTCCTGTCCAGTaGTGCTGGCCTCTGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSTQPVGLKFTSHSNPRSMAPVQ*CWPLRH Trigger: GTGCCTCAGAGGCCAGCAGCACTGGACAGGAGCCAT...GGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR CCA 90 bp | ATAGACGTACAGCAGTCCATGCTTGACAGCCAGCATGGCGTTGGAACGAGGGCAGTTCCCAGGTCTTGGTaGCCAAGTGCAGGACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IDVQQSMLDSQHGVGTRAVPRSW*PSAGPR Trigger: TCTGGGTCCTGCACTTGGCCACCAAGACCTGGGAAC...TGCCCTCGTTCCAACGCCATGCTGGCTGTCAAGCATGGACTGCTGTACGTCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCCGCAGGCTTCAGCAGGAACATGTCTGAGTGCTGGGTGCCTTTGTCCACAAGGTCGTGGGGAGGGTaGAGGACATGGTGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSAGFSRNMSECWVPLSTRSWGG*RTWCFC Trigger: ACAGAAACACCATGTCCTCCACCCTCCCCACGACCT...TGTGGACAAAGGCACCCAGCACTCAGACATGTTCCTGCTGAAGCCTGCGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
||
| CDS-3UTR TCA 90 bp | CACTCTGCAGGGCCTCCTCACTCCTGGCTCGACACCAGTGATGGTGAAACCATTGGAAGGTGTCCAGGCTaGAGGTGTACACATCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSAGPPHSWLDTSDGETIGRCPG*RCTHHC Trigger: ACAGTGATGTGTACACCTTCAGCCTGGACACCTTCC...AATGGTTTCACCATCACTGGTGTCGAGCCAGGAGTGAGGAGGCCCTGCAGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR TCA 90 bp | GCACACAGCCTGTGGGCCTCAAATTCACATCCCACTCTAACCCTCGTTCCACGTCAGCAGGAACATGTCTaGGTGCTGGGTGCCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AHSLWASNSHPTLTLVPRQQEHV*VLGAFV Trigger: GACAAAGGCACCCAGCACTCAGACATGTTCCTGCTG...ACGTGGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR GCA 90 bp | AGAAGCACACAGCCTGTGGGCCTCAAATTCACATCCCACTCTAACCCTCGTTCCGCCCTTCAGCTGTGCTaGAAACCAGCGACTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSTQPVGLKFTSHSNPRSALQLC*KPATLG Trigger: GCCAAGAGTCGCTGGTTTGCAGCACAGCTGAAGGGC...GGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR GCA 90 bp | TTAGAGCACACAGCCCAGTTTTATTATGACAGAAGCACACAGCCTGTGGGCCTCGCCTTAGGTGAGGGCTaGACCCCCAACCCTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LEHTAQFYYDRSTQPVGLALGEG*TPNPEG Trigger: TCCCTCAGGGTTGGGGGTGCAGCCCTCACCTAAGGC...GAGGCCCACAGGCTGTGTGCTTCTGTCATAATAAAACTGGGCTGTGTGCTCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGTCTTTTTGGCATCCAAGGTCTGGAAATGGGCTATGAGGGCCTCCAGGCCTTCCGCGAGCGCTTaGACACCTTCTTCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TWVFLASKVWKWAMRASRPSASA*TPSSPS Trigger: AGATGGAGAAGAAGGTGTCCAAGCGCTCGCGGAAGG...CCTGGAGGCCCTCATAGCCCATTTCCAGACCTTGGATGCCAAAAAGACCCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174255.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCGCAGGCTTCAGCAGGAACATGTCTGAGTGCTGGGTGCCTTTGTCCACATTGGCATCCAAGGTCTaGAAATGGGCTATGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSAGFSRNMSECWVPLSTLASKV*KWAMRA Trigger: GGCCCTCATAGCCCATTTCCAGACCTTGGATGCCAA...TGTGGACAAAGGCACCCAGCACTCAGACATGTTCCTGCTGAAGCCTGCGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| CDS-3UTR CCA 90 bp | AGACCTTGCAGTAGGCTTGACCCCCGAAGGGTTAATCCTGGTCCAAGCCCATTTTCTGTTCCCAGGTCTTaGTGGCCAAGTGCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: RPCSRLDPRRVNPGPSPFSVPRS*WPSAGP Trigger: GGGTCCTGCACTTGGCCACCAAGACCTGGGAACAGA...AAATGGGCTTGGACCAGGATTAACCCTTCGGGGGTCAAGCCTACTGCAAGGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| CDS-3UTR CCA 90 bp | ACATCCCACTCTAACCCTCGTTCCACGTGGACAGAAGCCACTGTGAAGTCAGGCGACAGCTTGCTCCACTaGAAGGTGTCCAGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSHSNPRSTWTEATVKSGDSLLH*KVSRLK Trigger: CTTCAGCCTGGACACCTTCCAGTGGAGCAAGCTGTC...GCCTGACTTCACAGTGGCTTCTGTCCACGTGGAACGAGGGTTAGAGTGGGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR TCA 90 bp | CCACCTCTGGGTGCTGCGGATCTGCTCCCTCCTCAGCACTGTCCTCCTGGTCTTTCCAGGTGTCCTTTCTaGTACTGTAGATGTAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPLGAADLLPPQHCPPGLSRCPF*YCRCRV Trigger: AACTCTACATCTACAGTATCAGAAAGGACACCTGGA...AAGACCAGGAGGACAGTGCTGAGGAGGGAGCAGATCCGCAGCACCCAGAGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| CDS-3UTR TCA 90 bp | GACAGAAGCCACTGTGAAGTCAGGCTAGCCCCCGTCAGACTGTGGGCACCCAAGGCCTGTGCAATGTCTTaGACTGCATCATCAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DRSHCEVRLAPVRLWAPKACAMS*TASSKH Trigger: ATGCTTTGATGATGCAGTTCAAGACATTGCACAGGC...CTTGGGTGCCCACAGTCTGACGGGGGCTAGCCTGACTTCACAGTGGCTTCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CCA 90 bp | AGGCTAGCCCCCGTCAGACTGTGGGCACCCAAGGCTCACAGAAGACCACTCTGCCAGTATCTGATGATTTaGAGCCACAGCCACAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLAPVRLWAPKAHRRPLCQYLMI*SHSHRK Trigger: TTTTCTGTGGCTGTGGCTCCAAATCATCAGATACTG...GCAGAGTGGTCTTCTGTGAGCCTTGGGTGCCCACAGTCTGACGGGGGCTAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CCA 90 bp | ACATCCCACTCTAACCCTCGTTCCACGTGGACAGAAGCCACTGTGAAGTCAGGCCAGTCTCCTGTTCAGTaGTGCCTTCAGGATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSHSNPRSTWTEATVKSGQSPVQ*CLQDPL Trigger: CAGAGGATCCTGAAGGCACCACTGAACAGGAGACTG...GCCTGACTTCACAGTGGCTTCTGTCCACGTGGAACGAGGGTTAGAGTGGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CCA 90 bp | GACAGAAGCCACTGTGAAGTCAGGCTAGCCCCCGTCAGACTGTGGGCACCCAAGAGCATGATTTTGCCATaGCCTGGGCTACTTTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: DRSHCEVRLAPVRLWAPKSMILP*PGLLST Trigger: TGTTGAAAGTAGCCCAGGCCATGGCAAAATCATGCT...CTTGGGTGCCCACAGTCTGACGGGGGCTAGCCTGACTTCACAGTGGCTTCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR TCA 90 bp | CCCTCGTTCCACGTGGACAGAAGCCACTGTGAAGTCAGGCTAGCCCCCGTCAGATCCAGGTGTCCTTTCTaGTACTGTAGATGTAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSFHVDRSHCEVRLAPVRSRCPF*YCRCRV Trigger: AACTCTACATCTACAGTATCAGAAAGGACACCTGGA...TCTGACGGGGGCTAGCCTGACTTCACAGTGGCTTCTGTCCACGTGGAACGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR TCA 90 bp | ACATCCCACTCTAACCCTCGTTCCACGTGGACAGAAGCCACTGTGAAGTCAGGCTGCATCATCAAAGCATaGTTTTGCCATGGCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSHSNPRSTWTEATVKSGCIIKA*FCHGLG Trigger: GCCCAGGCCATGGCAAAATCATGCTTTGATGATGCA...GCCTGACTTCACAGTGGCTTCTGTCCACGTGGAACGAGGGTTAGAGTGGGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR GCA 90 bp | CCTGTGGGCCTCAAATTCACATCCCACTCTAACCCTCGTTCCACGTGGACAGAAAGAAAAGCCAGACCTTaGAGTAGGCTTGACCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PVGLKFTSHSNPRSTWTERKARP*SRLDPR Trigger: TCGGGGGTCAAGCCTACTGCAAGGTCTGGCTTTTCT...TTCTGTCCACGTGGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CCA 90 bp | GTCCAGGCTGAAGGTGTACACATCACTGTAGTAGATGTAGTCCCTTGCACTTTCCCTTCTTCTCCATCTTaGCGGCCGTCTTCTCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VQAEGVHITVVDVVPCTFPSSPS*RPSSPR Trigger: GCGCGGAGAAGACGGCCGCCAAGATGGAGAAGAAGG...GAAAGTGCAAGGGACTACATCTACTACAGTGATGTGTACACCTTCAGCCTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| CDS-3UTR GCA 90 bp | CCTGTGGGCCTCAAATTCACATCCCACTCTAACCCTCGTTCCACGTGGACAGAACACTTTCTTCTCCTTTaGTTCAGGCCCCACATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVGLKFTSHSNPRSTWTEHFLLL*FRPHMA Trigger: AGCCATGTGGGGCCTGAAGCAAAGGAGAAGAAAGTG...TTCTGTCCACGTGGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CCA 90 bp | CCGCAGGCTTCAGCAGGAACATGTCTGAGTGCTGGGTGCCTTTGTCCACATCTTGGTGTTTCTGTGACCTaGGTCTTTTTGGCATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQASAGTCLSAGCLCPHLGVSVT*VFLASK Trigger: CTTGGATGCCAAAAAGACCCAGGTCACAGAAACACC...AAGATGTGGACAAAGGCACCCAGCACTCAGACATGTTCCTGCTGAAGCCTGCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| CDS-3UTR GCA 90 bp | TTCACATCCCACTCTAACCCTCGTTCCACGTGGACAGAAGCCACTGTGAAGTCACACCAGCTTCAAACATaGCGCCATAGACGTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FTSHSNPRSTWTEATVKSHQLQT*RHRRTA Trigger: TGCTGTACGTCTATGGCGGCATGTTTGAAGCTGGTG...TGACTTCACAGTGGCTTCTGTCCACGTGGAACGAGGGTTAGAGTGGGATGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CCA 90 bp | AGAAGCACACAGCCTGTGGGCCTCAAATTCACATCCCACTCTAACCCTCGTTCCAACATGTCTGAGTGCTaGGTGCCTTTGTCCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: RSTQPVGLKFTSHSNPRSNMSEC*VPLSTS Trigger: AGATGTGGACAAAGGCACCCAGCACTCAGACATGTT...GGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR TCA 90 bp | GCCACTCCTGGGATTTCGGATCCATCTCCACCAAGGTTTTCCACTCTTCCATCTGACATGGTGTTTCTGTaGCCTGGGTCTTTTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ATPGISDPSPPRFSTLPSDMVFL*PGSFWH Trigger: ATGCCAAAAAGACCCAGGTCACAGAAACACCATGTC...AGATGGAAGAGTGGAAAACCTTGGTGGAGATGGATCCGAAATCCCAGGAGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| CDS-3UTR TCA 90 bp | TTTTATTATGACAGAAGCACACAGCCTGTGGGCCTCAAATTCACATCCCACTCTCTGCACCCCCAACCCTaGGGGAGTGAGTACTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FYYDRSTQPVGLKFTSHSLHPQP*GSEYLL Trigger: AAGCAAGTACTCACTCCCTCAGGGTTGGGGGTGCAG...AGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGCTTCTGTCATAATAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR GCA 90 bp | TTCACATCCCACTCTAACCCTCGTTCCACGTGGACAGAAGCCACTGTGAAGTCATGTCTGAGTGCTGGGTaGCTTTGTCCACATCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTSHSNPRSTWTEATVKSCLSAG*LCPHLS Trigger: AGAAAGATGTGGACAAAGGCACCCAGCACTCAGACA...TGACTTCACAGTGGCTTCTGTCCACGTGGAACGAGGGTTAGAGTGGGATGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR GCA 90 bp | TTAGAGCACACAGCCCAGTTTTATTATGACAGAAGCACACAGCCTGTGGGCCTCAGGAACATGTCTGAGTaGTGGGTGCCTTTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LEHTAQFYYDRSTQPVGLRNMSE*WVPLST Trigger: TGTGGACAAAGGCACCCAGCACTCAGACATGTTCCT...GAGGCCCACAGGCTGTGTGCTTCTGTCATAATAAAACTGGGCTGTGTGCTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CCA 90 bp | GCCCAGTTTTATTATGACAGAAGCACACAGCCTGTGGGCCTCAAATTCACATCCTTGGCATCCAAGGTCTaGAAATGGGCTATGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQFYYDRSTQPVGLKFTSLASKV*KWAMRA Trigger: GGCCCTCATAGCCCATTTCCAGACCTTGGATGCCAA...GGATGTGAATTTGAGGCCCACAGGCTGTGTGCTTCTGTCATAATAAAACTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CCA 90 bp | CAAAGCATGATTTTGCCATGGCCTGGGCTACTTTCAACACTTTCTTCTCCTTTGACAGCGCCTGGGAGGTaGGCCAGGGATGTCAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QSMILPWPGLLSTLSSPLTAPGR*ARDVNF Trigger: AAAGTTGACATCCCTGGCCCACCTCCCAGGCGCTGT...CAAAGGAGAAGAAAGTGTTGAAAGTAGCCCAGGCCATGGCAAAATCATGCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| CDS-3UTR GCA 90 bp | TTTTATTATGACAGAAGCACACAGCCTGTGGGCCTCAAATTCACATCCCACTCTACGTACAGCAGTCCATaGTTGACAGCCAGCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FYYDRSTQPVGLKFTSHSTYSSP*LTASMA Trigger: CGCCATGCTGGCTGTCAAGCATGGACTGCTGTACGT...AGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGCTTCTGTCATAATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CCA 90 bp | TTTTATTATGACAGAAGCACACAGCCTGTGGGCCTCAAATTCACATCCCACTCTGGAGGGTGGAGGACATaGTGTTTCTGTGACCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FYYDRSTQPVGLKFTSHSGGWRT*CFCDLG Trigger: ACCCAGGTCACAGAAACACCATGTCCTCCACCCTCC...AGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGCTTCTGTCATAATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CCA 90 bp | GCCCAGTTTTATTATGACAGAAGCACACAGCCTGTGGGCCTCAAATTCACATCCTCAGCACTGTCCTCCTaGTCTTCATCCTCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: AQFYYDRSTQPVGLKFTSSALSS*SSSSPS Trigger: AGATGGAGAGGATGAAGACCAGGAGGACAGTGCTGA...GGATGTGAATTTGAGGCCCACAGGCTGTGTGCTTCTGTCATAATAAAACTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR TCA 90 bp | TTCACATCCCACTCTAACCCTCGTTCCACGTGGACAGAAGCCACTGTGAAGTCATGTCCACATCTTTCTTaGCTCTCTGCTTTGAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FTSHSNPRSTWTEATVKSCPHLS*LSALSN Trigger: GTTACTCAAAGCAGAGAGTCAAGAAAGATGTGGACA...TGACTTCACAGTGGCTTCTGTCCACGTGGAACGAGGGTTAGAGTGGGATGTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR TCA 90 bp | TTTTATTATGACAGAAGCACACAGCCTGTGGGCCTCAAATTCACATCCCACTCTAGATATACAGGTCACTaGAGAAGGAGCCCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FYYDRSTQPVGLKFTSHSRYTGH*RRSPPG Trigger: GCCTGGAGGGCTCCTTCTTCAGTGACCTGTATATCT...AGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGCTTCTGTCATAATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR GCA 90 bp | GCCCAGTTTTATTATGACAGAAGCACACAGCCTGTGGGCCTCAAATTCACATCCGTAGATGTAGTCCCTTaGACTTTCATGGAAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AQFYYDRSTQPVGLKFTSVDVVP*TFMEAT Trigger: GGTGGCTTCCATGAAAGTGCAAGGGACTACATCTAC...GGATGTGAATTTGAGGCCCACAGGCTGTGTGCTTCTGTCATAATAAAACTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR TCA 90 bp | TTTTATTATGACAGAAGCACACAGCCTGTGGGCCTCAAATTCACATCCCACTCTTCATCTTTCTCAGGATaGGCAGACAGGGAGGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FYYDRSTQPVGLKFTSHSSSFSG*ADREAF Trigger: AAACGCCTCCCTGTCTGCTCATCCTGAGAAAGATGA...AGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGCTTCTGTCATAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR TCA 90 bp | GCTGAAGGTGTACACATCACTGTAGTAGATGTAGTCCCTTGCACTTTCATGGAAAGAGTTCATTATACATaGAGGTCGTGGGGAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AEGVHITVVDVVPCTFMERVHYT*RSWGGW Trigger: CCACCCTCCCCACGACCTTCATGTATAATGAACTCT...TTCCATGAAAGTGCAAGGGACTACATCTACTACAGTGATGTGTACACCTTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| CDS-3UTR CAA 90 bp | CCATCAGGCAGCCTGACCTGGGCGTGGGCCCGGGGCCTGATGGGGACAGCTTGCATCTGTTCCCAGGTCTaGGTGGCCAAGTGCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: PSGSLTWAWARGLMGTACICSQV*VAKCRT Trigger: GGTCCTGCACTTGGCCACCAAGACCTGGGAACAGAT...GCAAGCTGTCCCCATCAGGCCCCGGGCCCACGCCCAGGTCAGGCTGCCTGATGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| CDS CCA 90 bp | CTTCCTCCTCCTTCCGCGAGCGCTTGGACACCTTCTTCTCCATCTTaGCGGCCGTCTTCTCCGCGCCGCGGCCCTTCTTCTCCTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPPPSASAWTPSSPS*RPSSPRRGPSSPSF Trigger: GAAAGAAGGAGAAGAAGGGCCGCGGCGCGGAGAAGACGGCCGCCAAGATGGAGAAGAAGGTGTCCAAGCGCTCGCGGAAGGAGGAGGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045884.17 ENSMUST00000174665.8 ENSMUST00000174717.8 |
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| CDS CCA 90 bp | AGGTCTCCTCCTTCCGCGAGCGCTTGGACACCTTCTTCTCCATCTTaGCGGCCGTCTTCTCCGCGCCGCGGCCCTTCTTCTCCTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSPPSASAWTPSSPS*RPSSPRRGPSSPSF Trigger: GAAAGAAGGAGAAGAAGGGCCGCGGCGCGGAGAAGACGGCCGCCAAGATGGAGAAGAAGGTGTCCAAGCGCTCGCGGAAGGAGGAGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174192.2 |
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| CDS CCA 90 bp | GGATCTCCTCCTTCCGCGAGCGCTTGGACACCTTCTTCTCCATCTTaGCGGCCGTCTTCTCCGCGCCGCGGCCCTTCTTCTCCTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSPPSASAWTPSSPS*RPSSPRRGPSSPSF Trigger: GAAAGAAGGAGAAGAAGGGCCGCGGCGCGGAGAAGACGGCCGCCAAGATGGAGAAGAAGGTGTCCAAGCGCTCGCGGAAGGAGGAGATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174255.2 |
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| CDS-3UTR CAA 90 bp | CTAGCCCCCGTCAGACTGTGGGCACCCAAGGCTCACAGAAGACCACTCTGCAGGACCTTCTTCTCCATCTaGGCGGCCGTCTTCTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LAPVRLWAPKAHRRPLCRTFFSI*AAVFSA Trigger: CGCGGAGAAGACGGCCGCCAAGATGGAGAAGAAGGT...CCTGCAGAGTGGTCTTCTGTGAGCCTTGGGTGCCCACAGTCTGACGGGGGCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CAA 90 bp | CAGGCTAGCCCCCGTCAGACTGTGGGCACCCAAGGCTCACAGAAGACCACTCTGTCCTTCCGCGAGCGCTaGGACACCTTCTTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: QASPRQTVGTQGSQKTTLSFRER*DTFFSI Trigger: GATGGAGAAGAAGGTGTCCAAGCGCTCGCGGAAGGA...CAGAGTGGTCTTCTGTGAGCCTTGGGTGCCCACAGTCTGACGGGGGCTAGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CAA 90 bp | CCCTCGTTCCACGTGGACAGAAGCCACTGTGAAGTCAGGCTAGCCCCCGTCAGAATCTGTTCCCAGGTCTaGGTGGCCAAGTGCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: PSFHVDRSHCEVRLAPVRICSQV*VAKCRT Trigger: GGTCCTGCACTTGGCCACCAAGACCTGGGAACAGAT...TCTGACGGGGGCTAGCCTGACTTCACAGTGGCTTCTGTCCACGTGGAACGAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CAA 90 bp | TTCCACGTGGACAGAAGCCACTGTGAAGTCAGGCTAGCCCCCGTCAGACTGTGGTCAGGATCCTCTGCCTaGCCCCGCCTCCGTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FHVDRSHCEVRLAPVRLWSGSSA*PRLRFF Trigger: GAAGAAACGGAGGCGGGGCAAGGCAGAGGATCCTGA...CCACAGTCTGACGGGGGCTAGCCTGACTTCACAGTGGCTTCTGTCCACGTGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CAA 90 bp | GCTCATCTTTCTCAGGATGAGCAGACAGGGAGGCGTTTAACCGTGGGGAGGGTGACCTTCTTCTCCATCTaGGCGGCCGTCTTCTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: AHLSQDEQTGRRLTVGRVTFFSI*AAVFSA Trigger: CGCGGAGAAGACGGCCGCCAAGATGGAGAAGAAGGT...CACCCTCCCCACGGTTAAACGCCTCCCTGTCTGCTCATCCTGAGAAAGATGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174255.2 |
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| CDS-3UTR CAA 90 bp | ACATCCCACTCTAACCCTCGTTCCACGTGGACAGAAGCCACTGTGAAGTCAGGCACAGCCAGCATGGCGTaGGAACGAGGGCATGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSHSNPRSTWTEATVKSGTASMA*ERGHGS Trigger: GGAGCCATGCCCTCGTTCCAACGCCATGCTGGCTGT...GCCTGACTTCACAGTGGCTTCTGTCCACGTGGAACGAGGGTTAGAGTGGGATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS CCA 90 bp | GGTGTTTCTGTGACCTGGGTCTTTTTGGCATCCAAGGTCTGGAAATaGGCTATGAGGGCCTCCAGGTCTTCCTCCTCCTTCCGCGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GVSVTWVFLASKVWK*AMRASRSSSSFRER Trigger: GCGCTCGCGGAAGGAGGAGGAAGACCTGGAGGCCCTCATAGCCCATTTCCAGACCTTGGATGCCAAAAAGACCCAGGTCACAGAAACACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045884.17 ENSMUST00000174665.8 ENSMUST00000174717.8 |
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| CDS-3UTR CAA 90 bp | AGTCCGGGACAGGTACTCTTCGAATTGCTCCCCACGGGCCACCTCTGGGTGCTGGTGACCTGGGTCTTTTaGGCATCCAAGGTCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPGQVLFELLPTGHLWVLVTWVF*ASKVWK Trigger: TTTCCAGACCTTGGATGCCAAAAAGACCCAGGTCAC...CAGCACCCAGAGGTGGCCCGTGGGGAGCAATTCGAAGAGTACCTGTCCCGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
||
| CDS-3UTR CAA 90 bp | GACCTGGGTCTTTTTGGCATCCAAGGTCTGGAAATGGGCTATGAGGGCCTCCAGTCCTTCCGCGAGCGCTaGGACACCTTCTTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: DLGLFGIQGLEMGYEGLQSFRER*DTFFSI Trigger: GATGGAGAAGAAGGTGTCCAAGCGCTCGCGGAAGGA...CTGGAGGCCCTCATAGCCCATTTCCAGACCTTGGATGCCAAAAAGACCCAGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174255.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCTAGCCCCCGTCAGACTGTGGGCACCCAAGGCTCACAGAAGACCACTCTGCCAGTATCTGATGATTaGGAGCCACAGCCACAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QASPRQTVGTQGSQKTTLPVSDD*EPQPQK Trigger: TTTCTGTGGCTGTGGCTCCAAATCATCAGATACTGG...CAGAGTGGTCTTCTGTGAGCCTTGGGTGCCCACAGTCTGACGGGGGCTAGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR CAA 90 bp | CACTCTGCAGGGCCTCCTCACTCCTGGCTCGACACCAGTGATGGTGAAACCATTTACAGCAGTCCATGCTaGACAGCCAGCATGGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HSAGPPHSWLDTSDGETIYSSPC*TASMAL Trigger: CAACGCCATGCTGGCTGTCAAGCATGGACTGCTGTA...AATGGTTTCACCATCACTGGTGTCGAGCCAGGAGTGAGGAGGCCCTGCAGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
||
| CDS-3UTR CAA 90 bp | CAGGCTAGCCCCCGTCAGACTGTGGGCACCCAAGGCTCACAGAAGACCACTCTGGGCCTGTGCAATGTCTaGAACTGCATCATCAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QASPRQTVGTQGSQKTTLGLCNV*NCIIKA Trigger: TGCTTTGATGATGCAGTTCAAGACATTGCACAGGCC...CAGAGTGGTCTTCTGTGAGCCTTGGGTGCCCACAGTCTGACGGGGGCTAGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CAA 90 bp | GCGACTCTTGGCCGAATCATAGATATACAGGTCACTGAAGAAGGAGCCCTCCAGACCTTCTTCTCCATCTaGGCGGCCGTCTTCTCCGCG | + |
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Preference number: 5 (lower is better) Translates to: ATLGRIIDIQVTEEGALQTFFSI*AAVFSA Trigger: CGCGGAGAAGACGGCCGCCAAGATGGAGAAGAAGGT...CTGGAGGGCTCCTTCTTCAGTGACCTGTATATCTATGATTCGGCCAAGAGTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| CDS-3UTR CAA 90 bp | AGCACACAGCCTGTGGGCCTCAAATTCACATCCCACTCTAACCCTCGTTCCACGGACCTTGCAGTAGGCTaGACCCCCGAAGGGTTAATC | + |
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Preference number: 5 (lower is better) Translates to: STQPVGLKFTSHSNPRSTDLAVG*TPEGLI Trigger: GATTAACCCTTCGGGGGTCAAGCCTACTGCAAGGTC...CGTGGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CAA 90 bp | CACTCTGCAGGGCCTCCTCACTCCTGGCTCGACACCAGTGATGGTGAAACCATTGAGTGCTGGGTGCCTTaGTCCACATCTTTCTTGACT | + |
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Preference number: 5 (lower is better) Translates to: HSAGPPHSWLDTSDGETIECWVP*STSFLT Trigger: AGTCAAGAAAGATGTGGACAAAGGCACCCAGCACTC...AATGGTTTCACCATCACTGGTGTCGAGCCAGGAGTGAGGAGGCCCTGCAGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CAA 90 bp | AGCACACAGCCTGTGGGCCTCAAATTCACATCCCACTCTAACCCTCGTTCCACGACACTTTCTTCTCCTTaGCTTCAGGCCCCACATGGC | + |
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Preference number: 5 (lower is better) Translates to: STQPVGLKFTSHSNPRSTTLSSP*LQAPHG Trigger: GCCATGTGGGGCCTGAAGCAAAGGAGAAGAAAGTGT...CGTGGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CAA 90 bp | AGAAGCACACAGCCTGTGGGCCTCAAATTCACATCCCACTCTAACCCTCGTTCCTTCTTCTTCTCAGACTaGGGGCCCTTCAGCTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: RSTQPVGLKFTSHSNPRSFFFSD*GPFSCA Trigger: AGCACAGCTGAAGGGCCCCAAGTCTGAGAAGAAGAA...GGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGGCTGTGTGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS-3UTR CAA 90 bp | CCTGTGGGCCTCAAATTCACATCCCACTCTAACCCTCGTTCCACGTGGACAGAAGTGACCTGGGTCTTTTaGGCATCCAAGGTCTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: PVGLKFTSHSNPRSTWTEVTWVF*ASKVWK Trigger: TTTCCAGACCTTGGATGCCAAAAAGACCCAGGTCAC...TTCTGTCCACGTGGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS TCA 90 bp | TTGAAATATTCACCTCCGAAAAGGATCAGCTCATCTTTCTCAGGATaGGCAGACAGGGAGGCGTTTAACCGTGGGGAGGGTGGAGGACAT | + |
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Preference number: 5 (lower is better) Translates to: LKYSPPKRISSSFSG*ADREAFNRGEGGGH Trigger: ATGTCCTCCACCCTCCCCACGGTTAAACGCCTCCCTGTCTGCTCATCCTGAGAAAGATGAGCTGATCCTTTTCGGAGGTGAATATTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045884.17 ENSMUST00000174717.8 |
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| CDS-3UTR CAA 90 bp | CACACAGCCCAGTTTTATTATGACAGAAGCACACAGCCTGTGGGCCTCAAATTCCATCAAAGCATGATTTaGCCATGGCCTGGGCTACTT | + |
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Preference number: 5 (lower is better) Translates to: HTAQFYYDRSTQPVGLKFHQSMI*PWPGLL Trigger: AAGTAGCCCAGGCCATGGCAAAATCATGCTTTGATG...GAATTTGAGGCCCACAGGCTGTGTGCTTCTGTCATAATAAAACTGGGCTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045884.17 |
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| CDS CCA 72 bp | CCTTCCGCGAGCGCTTGGACACCTTCTTCTCCATCTTaGCGGCCGTCTTCTCCGCGCCGCGGCCCTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PSASAWTPSSPS*RPSSPRRGPSS Trigger: AGAAGAAGGGCCGCGGCGCGGAGAAGACGGCCGCCAAGATGGAGAAGAAGGTGTCCAAGCGCTCGCGGAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045884.17 ENSMUST00000174192.2 ENSMUST00000174255.2 ENSMUST00000174665.8 ENSMUST00000174717.8 |
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| CDS CAA 72 bp | TCCTTCCGCGAGCGCTTGGACACCTTCTTCTCCATCTaGGCGGCCGTCTTCTCCGCGCCGCGGCCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SFRERLDTFFSI*AAVFSAPRPFF Trigger: GAAGAAGGGCCGCGGCGCGGAGAAGACGGCCGCCAAGATGGAGAAGAAGGTGTCCAAGCGCTCGCGGAAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045884.17 ENSMUST00000174192.2 ENSMUST00000174255.2 ENSMUST00000174665.8 ENSMUST00000174717.8 |
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| CDS CAA 90 bp | CGGATCTCCTCCTTCCGCGAGCGCTTGGACACCTTCTTCTCCATCTaGGCGGCCGTCTTCTCCGCGCCGCGGCCCTTCTTCTCCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RISSFRERLDTFFSI*AAVFSAPRPFFSFF Trigger: AAAGAAGGAGAAGAAGGGCCGCGGCGCGGAGAAGACGGCCGCCAAGATGGAGAAGAAGGTGTCCAAGCGCTCGCGGAAGGAGGAGATCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174255.2 |
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| CDS CAA 72 bp | AGGGCCTCCAGGTCTTCCTCCTCCTTCCGCGAGCGCTaGGACACCTTCTTCTCCATCTTGGCGGCCGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RASRSSSSFRER*DTFFSILAAVF Trigger: GAAGACGGCCGCCAAGATGGAGAAGAAGGTGTCCAAGCGCTCGCGGAAGGAGGAGGAAGACCTGGAGGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045884.17 ENSMUST00000174665.8 ENSMUST00000174717.8 |
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| CDS CAA 90 bp | TCTTCCTCCTCCTTCCGCGAGCGCTTGGACACCTTCTTCTCCATCTaGGCGGCCGTCTTCTCCGCGCCGCGGCCCTTCTTCTCCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SSSSFRERLDTFFSI*AAVFSAPRPFFSFF Trigger: AAAGAAGGAGAAGAAGGGCCGCGGCGCGGAGAAGACGGCCGCCAAGATGGAGAAGAAGGTGTCCAAGCGCTCGCGGAAGGAGGAGGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045884.17 ENSMUST00000174665.8 ENSMUST00000174717.8 |
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| CDS CAA 90 bp | AAGGTCTCCTCCTTCCGCGAGCGCTTGGACACCTTCTTCTCCATCTaGGCGGCCGTCTTCTCCGCGCCGCGGCCCTTCTTCTCCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: KVSSFRERLDTFFSI*AAVFSAPRPFFSFF Trigger: AAAGAAGGAGAAGAAGGGCCGCGGCGCGGAGAAGACGGCCGCCAAGATGGAGAAGAAGGTGTCCAAGCGCTCGCGGAAGGAGGAGACCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174192.2 |
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| CDS CAA 72 bp | CCATCCGATGCCCGCTTCGACCTGAAGGACCCCCTGTaGATCGAATCTGTTCCCAGGTCTTGGTGGCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: PSDARFDLKDPL*IESVPRSWWPS Trigger: ACTTGGCCACCAAGACCTGGGAACAGATTCGATCAACAGGGGGTCCTTCAGGTCGAAGCGGGCATCGGATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045884.17 ENSMUST00000174192.2 ENSMUST00000174665.8 |
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| CDS CAA 72 bp | CGAGTACTAACACGGATCTCCTCCTTCCGCGAGCGCTaGGACACCTTCTTCTCCATCTTGGCGGCCGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RVLTRISSFRER*DTFFSILAAVF Trigger: GAAGACGGCCGCCAAGATGGAGAAGAAGGTGTCCAAGCGCTCGCGGAAGGAGGAGATCCGTGTTAGTACTCG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174255.2 |
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| CDS TCA 72 bp | TCACCTCCGAAAAGGATCAGCTCATCTTTCTCAGGATaGGCAGACAGGGAGGCGTTTAACCGTGGGGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: SPPKRISSSFSG*ADREAFNRGEG Trigger: ACCCTCCCCACGGTTAAACGCCTCCCTGTCTGCTCATCCTGAGAAAGATGAGCTGATCCTTTTCGGAGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045884.17 ENSMUST00000174717.8 |
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| CDS CCA 72 bp | GTTTCTGTGACCTGGGTCTTTTTGGCATCCAAGGTCTaGAAATGGGCTATGAGGGCCTCCAGGTCTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VSVTWVFLASKV*KWAMRASRSSS Trigger: GGAGGAAGACCTGGAGGCCCTCATAGCCCATTTCCAGACCTTGGATGCCAAAAAGACCCAGGTCACAGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045884.17 ENSMUST00000174665.8 ENSMUST00000174717.8 |
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| CDS CAA 72 bp | TCATTATACATGAAGGTCTCCTCCTTCCGCGAGCGCTaGGACACCTTCTTCTCCATCTTGGCGGCCGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLYMKVSSFRER*DTFFSILAAVF Trigger: GAAGACGGCCGCCAAGATGGAGAAGAAGGTGTCCAAGCGCTCGCGGAAGGAGGAGACCTTCATGTATAATGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174192.2 |
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| CDS TCA 72 bp | AAGGTCGTGGGGAGGGTGGAGGACATGGTGTTTCTGTaGCCTGGGTCTTTTTGGCATCCAAGGTCTGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: KVVGRVEDMVFL*PGSFWHPRSGN Trigger: ATTTCCAGACCTTGGATGCCAAAAAGACCCAGGTCACAGAAACACCATGTCCTCCACCCTCCCCACGACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174665.8 |
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| CDS CCA 72 bp | AGTAGATGTAGTCCCGAATCTGTTCCCAGGTCTTGGTaGCCAAGTGCAGGACCCAGAGGTCCTTGTAATGGT | + |
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Preference number: 6 (lower is better) Translates to: SRCSPESVPRSW*PSAGPRGPCNG Trigger: ACCATTACAAGGACCTCTGGGTCCTGCACTTGGCCACCAAGACCTGGGAACAGATTCGGGACTACATCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174717.8 |
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| CDS CCA 72 bp | TGTAGTAGATGTAGTCCCGAATCTGTTCCCAGGTCTTaGTGGCCAAGTGCAGGACCCAGAGGTCCTTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: CSRCSPESVPRS*WPSAGPRGPCN Trigger: ATTACAAGGACCTCTGGGTCCTGCACTTGGCCACCAAGACCTGGGAACAGATTCGGGACTACATCTACTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174717.8 |
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| CDS CAA 90 bp | CTTTCTGATACTGTAGATGTAGAGTTCATTATACATGAAGGTTTTTaGGCCATTGAAATATTCACCTCCGAAAAGGATCAGCTCATCTTT | + |
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Preference number: 6 (lower is better) Translates to: LSDTVDVEFIIHEGF*AIEIFTSEKDQLIF Trigger: AAAGATGAGCTGATCCTTTTCGGAGGTGAATATTTCAATGGCCAAAAAACCTTCATGTATAATGAACTCTACATCTACAGTATCAGAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045884.17 ENSMUST00000174717.8 |
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| CDS CAA 72 bp | ACTGTAGATGTAGAGTTCATTATACATGAAGGTTTTTaGGCCATTGAAATATTCACCTCCGAAAAGGATCAG | + |
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Preference number: 6 (lower is better) Translates to: TVDVEFIIHEGF*AIEIFTSEKDQ Trigger: CTGATCCTTTTCGGAGGTGAATATTTCAATGGCCAAAAAACCTTCATGTATAATGAACTCTACATCTACAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045884.17 ENSMUST00000174717.8 |
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