Pregenerated sensors for KLHDC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063576Ensembl transcript IDs: ENSMUST00000071841.7, ENSMUST00000165007.9, ENSMUST00000232776.2, ENSMUST00000233524.2, ENSMUST00000233733.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCGCGGGTTGGGGAGGGGGTTTCATGCCAACAGCCGAGGCTCCTCTCAGCTCCCCCAGCACACACAGCCTaGCTACCCAGCCAGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: PRVGEGVSCQQPRLLSAPPAHTA*LPSQTG Trigger: CCCAGTCTGGCTGGGTAGCCAGGCTGTGTGTGCTGG...GGGAGCTGAGAGGAGCCTCGGCTGTTGGCATGAAACCCCCTCCCCAACCCGCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTCAGCTCCCGGGCGATGCTCAAGCAGGGAGAGGGTGGTCATGGGGAGAGGCTACCCAGCCAGACTaGGGCAGAGCAAAGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SSQLPGDAQAGRGWSWGEATQPD*GRAKAQ Trigger: CTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGC...CTCTCCCCATGACCACCCTCTCCCTGCTTGAGCATCGCCCGGGAGCTGAGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCACACACAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGAGCGGTGGAGGGAGGTaGATGGGGACAGAGCACCAA | + |
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Preference number: 2 (lower is better) Translates to: SSTHSLATQPDWGRAKAQSGGGR*MGTEHQ Trigger: TTGGTGCTCTGTCCCCATCCACCTCCCTCCACCGCT...CTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTGTGTGTGCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAGCACACACAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCGAAGGGCAGGGGCAATaGAGACAAGAGAGGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: FPAHTAWLPSQTGAEQRPEGQGQ*RQERAQ Trigger: CTGAGCCCTCTCTTGTCTTCATTGCCCCTGCCCTTC...GGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTGTGTGTGCTGGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| 3UTR-3UTR TCA 90 bp | CACACGCCTTTAATCCCAGCATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAGGGCAGCAGAGCTTCTaGGCGTGGCTCGAACAATCC | + |
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Preference number: 2 (lower is better) Translates to: HTPLIPAFGRRGQPGLYRGQQSF*AWLEQS Trigger: GGATTGTTCGAGCCACGCTCAGAAGCTCTGCTGCCC...TCTGTATAGACCTGGCTGGCCTCTCCTTCCAAATGCTGGGATTAAAGGCGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAGAAACCCTGTCTCGGGACCTCTCTCCATTCCTaGCCTAAGGGAGTCCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: QHLEGEASQVYTEKPCLGTSLHS*PKGVQK Trigger: TTTCTGGACTCCCTTAGGTCAGGAATGGAGAGAGGT...CCCGAGACAGGGTTTCTCTGTATAGACCTGGCTGGCCTCTCCTTCCAAATGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| 3UTR-3UTR TCA 90 bp | AAACTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGAAGGGCAGGGGCAATaGAGACAAGAGAGGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: KLPTEFTAQKTPLVHQLHEGQGQ*RQERAQ Trigger: CTGAGCCCTCTCTTGTCTTCATTGCCCCTGCCCTTC...GTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| 3UTR-3UTR TCA 90 bp | GTGGCACACGCCTTTAATCCCAGCATTTGGAAGGAGAGGCCAGCCAGGTCTATATTTTGGTGCTCAATTTaGACTCAATACGGGCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: VAHAFNPSIWKERPARSIFWCSI*TQYGQE Trigger: TTCTTGCCCGTATTGAGTTCAAATTGAGCACCAAAA...TATAGACCTGGCTGGCCTCTCCTTCCAAATGCTGGGATTAAAGGCGTGTGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| 3UTR TCA 72 bp | CAATACGGGCAAGAAATAGGAACCTCTCTCCATTCCTaGCCTAAGGGAGTCCAGAAACTCTTCAACCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: QYGQEIGTSLHS*PKGVQKLFNLL Trigger: AAGAAGGTTGAAGAGTTTCTGGACTCCCTTAGGTCAGGAATGGAGAGAGGTTCCTATTTCTTGCCCGTATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| 3UTR TCA 72 bp | GGCAATGTCTCATGGAGTGACTTTTGGTGCTCAATTTaGACTCAATACGGGCAAGAAATAGGAACCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: GNVSWSDFWCSI*TQYGQEIGTSL Trigger: GAGAGAGGTTCCTATTTCTTGCCCGTATTGAGTTCAAATTGAGCACCAAAAGTCACTCCATGAGACATTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| 3UTR TCA 72 bp | CTTAGAATGACCAAGAGGAGGCAATGTCTCATGGAGTaGCTTTTGGTGCTCAATTTGAACTCAATACGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LRMTKRRQCLME*LLVLNLNSIRA Trigger: TGCCCGTATTGAGTTCAAATTGAGCACCAAAAGTCACTCCATGAGACATTGCCTCCTCTTGGTCATTCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| 3UTR TCA 72 bp | GTCCAGAAACTCTTCAACCTTCTTTGTAGTCAACCCTaGAATTTAGTCAAAATACATCACGAAAACAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: VQKLFNLLCSQP*NLVKIHHENKQ Trigger: TTGTTTGTTTTCGTGATGTATTTTGACTAAATTTCAGGGTTGACTACAAAGAAGGTTGAAGAGTTTCTGGAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| CDS-3UTR GCA 90 bp | CACCGCGGGTTGGGGAGGGGGTTTCATGCCAACAGCCGAGGCTCCTCTCAGCTCAGGCTGAATGGCTCCTaGGCCCCTCAGGCAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: HRGLGRGFHANSRGSSQLRLNGS*APQAAP Trigger: CGGTGCTGCCTGAGGGGCGCAGGAGCCATTCAGCCT...GAGCTGAGAGGAGCCTCGGCTGTTGGCATGAAACCCCCTCCCCAACCCGCGGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGGAGCGGTGGAGATGGTTCACCCTGCGTaGCCCGCCCTCCAGATGCAC | + |
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Preference number: 4 (lower is better) Translates to: QPGYPARLGQSKGPGAVEMVHPA*PALQMH Trigger: GTGCATCTGGAGGGCGGGCCACGCAGGGTGAACCAT...CTCCACCGCTCCTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR GCA 90 bp | CACCGCGGGTTGGGGAGGGGGTTTCATGCCAACAGCCGAGGCTCCTCTCAGCTCCAGCATGGTTCACCCTaGGTGGCCCGCCCTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HRGLGRGFHANSRGSSQLQHGSP*VARPPD Trigger: ATCTGGAGGGCGGGCCACGCAGGGTGAACCATGCTG...GAGCTGAGAGGAGCCTCGGCTGTTGGCATGAAACCCCCTCCCCAACCCGCGGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR TCA 90 bp | TCCAGCACACACAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGCCCAGGAACTGCCCCTaGCACTCGGGGTGTAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTHSLATQPDWGRAKAQPRNCP*HSGCRP Trigger: TGGTCTACACCCCGAGTGTCAGGGGCAGTTCCTGGG...CTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTGTGTGTGCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR GCA 90 bp | CAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGGAGCGGTGGAGTGGCCCAAAGCGGTCTaGACGGCCCCCAAAGACATA | + |
|
Preference number: 4 (lower is better) Translates to: QPGYPARLGQSKGPGAVEWPKAV*TAPKDI Trigger: TATGTCTTTGGGGGCCGTGCAGACCGCTTTGGGCCA...CTCCACCGCTCCTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CCA 90 bp | TCCTCTCAGCTCCCGGGCGATGCTCAAGCAGGGAGAGGGTGGTCATGGGGAGAGATGGTTCACCCTGCGTaGCCCGCCCTCCAGATGCAC | + |
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Preference number: 4 (lower is better) Translates to: SSQLPGDAQAGRGWSWGEMVHPA*PALQMH Trigger: GTGCATCTGGAGGGCGGGCCACGCAGGGTGAACCAT...CTCTCCCCATGACCACCCTCTCCCTGCTTGAGCATCGCCCGGGAGCTGAGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CCA 90 bp | TCCTCTCAGCTCCCGGGCGATGCTCAAGCAGGGAGAGGGTGGTCATGGGGAGAGACAGCCACTGCAGCATaGTTCACCCTGCGTGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: SSQLPGDAQAGRGWSWGETATAA*FTLRGP Trigger: CGGGCCACGCAGGGTGAACCATGCTGCAGTGGCTGT...CTCTCCCCATGACCACCCTCTCCCTGCTTGAGCATCGCCCGGGAGCTGAGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR GCA 90 bp | TTTCCAGCACACACAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCGTGCCCGACAGCCACTaGAGCATGGTTCACCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FPAHTAWLPSQTGAEQRPVPDSH*SMVHPA Trigger: CGCAGGGTGAACCATGCTGCAGTGGCTGTCGGGCAC...GGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTGTGTGTGCTGGAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR GCA 90 bp | TCCATCAACTCCACGTGGAGGTATACCGAGTCCAGGGTCCAAAGGGGCAGGCGGAGGCTGAATGGCTCCTaGGCCCCTCAGGCAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SINSTWRYTESRVQRGRRRLNGS*APQAAP Trigger: CGGTGCTGCCTGAGGGGCGCAGGAGCCATTCAGCCT...CCGCCTGCCCCTTTGGACCCTGGACTCGGTATACCTCCACGTGGAGTTGATGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR GCA 90 bp | AACAGCTCAAGGAAGGGTGAAGCTGTCTGTTGGTCCCCACCACCGCGGGTTGGGGTGCCCGACAGCCACTaGAGCATGGTTCACCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: NSSRKGEAVCWSPPPRVGVPDSH*SMVHPA Trigger: CGCAGGGTGAACCATGCTGCAGTGGCTGTCGGGCAC...CCCAACCCGCGGTGGTGGGGACCAACAGACAGCTTCACCCTTCCTTGAGCTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR GCA 90 bp | CACCGCGGGTTGGGGAGGGGGTTTCATGCCAACAGCCGAGGCTCCTCTCAGCTCCCCCTTCAGTGTCATTaGGCCCACCCCAAAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRGLGRGFHANSRGSSQLPLQCH*AHPKGR Trigger: TCTTCCTTTGGGGTGGGCGCAATGACACTGAAGGGG...GAGCTGAGAGGAGCCTCGGCTGTTGGCATGAAACCCCCTCCCCAACCCGCGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CCA 90 bp | TTTCCAGCACACACAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCACAATACAGCAACACTaGCGGCGGCGGGGACACGGT | + |
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Preference number: 4 (lower is better) Translates to: FPAHTAWLPSQTGAEQRPTIQQH*RRRGHG Trigger: ACCGTGTCCCCGCCGCCGCCAGTGTTGCTGTATTGT...GGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTGTGTGTGCTGGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR TCA 90 bp | AACAGCTCAAGGAAGGGTGAAGCTGTCTGTTGGTCCCCACCACCGCGGGTTGGGGCCCAGCATTGTGGCTaGGTGGAAGTCCCTCCAACG | + |
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Preference number: 4 (lower is better) Translates to: NSSRKGEAVCWSPPPRVGAQHCG*VEVPPT Trigger: CGTTGGAGGGACTTCCACTCAGCCACAATGCTGGGC...CCCAACCCGCGGTGGTGGGGACCAACAGACAGCTTCACCCTTCCTTGAGCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR GCA 90 bp | AGTCCATCAACTCCACGTGGAGGTATACCGAGTCCAGGGTCCAAAGGGGCAGGCCAGCATGGTTCACCCTaGGTGGCCCGCCCTCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SPSTPRGGIPSPGSKGAGQHGSP*VARPPD Trigger: ATCTGGAGGGCGGGCCACGCAGGGTGAACCATGCTG...GCCTGCCCCTTTGGACCCTGGACTCGGTATACCTCCACGTGGAGTTGATGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR GCA 90 bp | TCCTCTCAGCTCCCGGGCGATGCTCAAGCAGGGAGAGGGTGGTCATGGGGAGAGCCCCTTCAGTGTCATTaGGCCCACCCCAAAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SSQLPGDAQAGRGWSWGEPLQCH*AHPKGR Trigger: TCTTCCTTTGGGGTGGGCGCAATGACACTGAAGGGG...CTCTCCCCATGACCACCCTCTCCCTGCTTGAGCATCGCCCGGGAGCTGAGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CCA 90 bp | CACCGCGGGTTGGGGAGGGGGTTTCATGCCAACAGCCGAGGCTCCTCTCAGCTCAGCATTGTGGCTGAGTaGAAGTCCCTCCAACGTGCA | + |
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Preference number: 4 (lower is better) Translates to: HRGLGRGFHANSRGSSQLSIVAE*KSLQRA Trigger: TGCACGTTGGAGGGACTTCCACTCAGCCACAATGCT...GAGCTGAGAGGAGCCTCGGCTGTTGGCATGAAACCCCCTCCCCAACCCGCGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR TCA 90 bp | CAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGGAGCGGTGGAGCCCCAAAAATGTACATaGTCTTGCCCAGGACACAAG | + |
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Preference number: 4 (lower is better) Translates to: QPGYPARLGQSKGPGAVEPQKCT*SCPGHK Trigger: CTTGTGTCCTGGGCAAGATCATGTACATTTTTGGGG...CTCCACCGCTCCTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR GCA 90 bp | CCGCGGGTTGGGGAGGGGGTTTCATGCCAACAGCCGAGGCTCCTCTCAGCTCCCCAGAGGTCATGGAAATaGCGATTCAGCCTTGCATTG | + |
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Preference number: 4 (lower is better) Translates to: PRVGEGVSCQQPRLLSAPQRSWK*RFSLAL Trigger: CAATGCAAGGCTGAATCGGCATTTCCATGACCTCTG...GGGAGCTGAGAGGAGCCTCGGCTGTTGGCATGAAACCCCCTCCCCAACCCGCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR GCA 90 bp | CAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGGAGCGGTGGAGCAGAGGTCATGGAAATaGCGATTCAGCCTTGCATTG | + |
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Preference number: 4 (lower is better) Translates to: QPGYPARLGQSKGPGAVEQRSWK*RFSLAL Trigger: CAATGCAAGGCTGAATCGGCATTTCCATGACCTCTG...CTCCACCGCTCCTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGGAGCGGTGGAGTCCATGTCATGGTGCTaGTATCCAGCTTGTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: QPGYPARLGQSKGPGAVESMSWC*YPACGC Trigger: ACATCCACAAGCTGGATACCAGCACCATGACATGGA...CTCCACCGCTCCTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CCA 90 bp | TCCTCTCAGCTCCCGGGCGATGCTCAAGCAGGGAGAGGGTGGTCATGGGGAGAGAGCATTGTGGCTGAGTaGAAGTCCCTCCAACGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SSQLPGDAQAGRGWSWGESIVAE*KSLQRA Trigger: TGCACGTTGGAGGGACTTCCACTCAGCCACAATGCT...CTCTCCCCATGACCACCCTCTCCCTGCTTGAGCATCGCCCGGGAGCTGAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGGAGCGGTGGAGCGGTCCTTTCCCCTTTaGTTCAATCTTCTTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: QPGYPARLGQSKGPGAVERSFPL*FNLLPG Trigger: ACCTGGAAGAAGATTGAACCAAAGGGGAAAGGACCG...CTCCACCGCTCCTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CCA 90 bp | TCCATCAACTCCACGTGGAGGTATACCGAGTCCAGGGTCCAAAGGGGCAGGCGGTCCCACCTGATGTCATaGGGCAGACAGGACTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SINSTWRYTESRVQRGRRSHLMS*GRQDWS Trigger: GGACCAGTCCTGTCTGCCCCATGACATCAGGTGGGA...CCGCCTGCCCCTTTGGACCCTGGACTCGGTATACCTCCACGTGGAGTTGATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR TCA 90 bp | TCCTCTCAGCTCCCGGGCGATGCTCAAGCAGGGAGAGGGTGGTCATGGGGAGAGATCAATGAGGACGGTTaGGTGCCCATAGCGCATGTA | + |
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Preference number: 4 (lower is better) Translates to: SSQLPGDAQAGRGWSWGEINEDG*VPIAHV Trigger: TACATGCGCTATGGGCACTCAACCGTCCTCATTGAT...CTCTCCCCATGACCACCCTCTCCCTGCTTGAGCATCGCCCGGGAGCTGAGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR TCA 90 bp | CCCAGCATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAGAAACCCTGTCTCGCCCAGGAACTGCCCCTaGCACTCGGGGTGTAGACCA | + |
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Preference number: 4 (lower is better) Translates to: PSIWKERPARSIQRNPVSPRNCP*HSGCRP Trigger: TGGTCTACACCCCGAGTGTCAGGGGCAGTTCCTGGG...CGAGACAGGGTTTCTCTGTATAGACCTGGCTGGCCTCTCCTTCCAAATGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| CDS-3UTR TCA 90 bp | CAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGGAGCGGTGGAGATCTCATTGTTGGAATaGAATGGCCCAAAGCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QPGYPARLGQSKGPGAVEISLLE*NGPKRS Trigger: AGACCGCTTTGGGCCATTTCATTCCAACAATGAGAT...CTCCACCGCTCCTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR GCA 90 bp | CCCAGCATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAGAAACCCTGTCTCGCAGCATGGTTCACCCTaGGTGGCCCGCCCTCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: PSIWKERPARSIQRNPVSQHGSP*VARPPD Trigger: ATCTGGAGGGCGGGCCACGCAGGGTGAACCATGCTG...CGAGACAGGGTTTCTCTGTATAGACCTGGCTGGCCTCTCCTTCCAAATGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| CDS-3UTR GCA 90 bp | CCGCGGGTTGGGGAGGGGGTTTCATGCCAACAGCCGAGGCTCCTCTCAGCTCCCATGCCGATTCAGCCTTaGATTGTAGCCACCAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: PRVGEGVSCQQPRLLSAPMPIQP*IVATKD Trigger: ATCTTTGGTGGCTACAATGCAAGGCTGAATCGGCAT...GGGAGCTGAGAGGAGCCTCGGCTGTTGGCATGAAACCCCCTCCCCAACCCGCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CCA 90 bp | AACAGCTCAAGGAAGGGTGAAGCTGTCTGTTGGTCCCCACCACCGCGGGTTGGGGATTGCCCAGCATTGTaGCTGAGTGGAAGTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: NSSRKGEAVCWSPPPRVGDCPAL*LSGSPS Trigger: GGAGGGACTTCCACTCAGCCACAATGCTGGGCAATC...CCCAACCCGCGGTGGTGGGGACCAACAGACAGCTTCACCCTTCCTTGAGCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGGAGCGGTGGAGAACTTCCAGAGGTCATaGAAATGCCGATTCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: QPGYPARLGQSKGPGAVENFQRS*KCRFSL Trigger: AAGGCTGAATCGGCATTTCCATGACCTCTGGAAGTT...CTCCACCGCTCCTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR TCA 90 bp | AACAGCTCAAGGAAGGGTGAAGCTGTCTGTTGGTCCCCACCACCGCGGGTTGGGAGACGGTGTCATCAATaGGGACGGTTGAGTGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: NSSRKGEAVCWSPPPRVGRRCHQ*GRLSAH Trigger: ATGGGCACTCAACCGTCCTCATTGATGACACCGTCT...CCCAACCCGCGGTGGTGGGGACCAACAGACAGCTTCACCCTTCCTTGAGCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR TCA 90 bp | CCAGCATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAGAAACCCTGTCTCGGGCCCAGCATTGTGGCTaGGTGGAAGTCCCTCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: PAFGRRGQPGLYRETLSRAQHCG*VEVPPT Trigger: CGTTGGAGGGACTTCCACTCAGCCACAATGCTGGGC...CCGAGACAGGGTTTCTCTGTATAGACCTGGCTGGCCTCTCCTTCCAAATGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGCACACACAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGCCAAAGACATACATGTaGTTGCCCAGCATTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSTHSLATQPDWGRAKAQPKTYM*LPSIVA Trigger: AGCCACAATGCTGGGCAATCACATGTATGTCTTTGG...CTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTGTGTGTGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR TCA 90 bp | TCCATCAACTCCACGTGGAGGTATACCGAGTCCAGGGTCCAAAGGGGCAGGCGGAGACAATGGGGCGGCTaGTATTGCTGTTGGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SINSTWRYTESRVQRGRRRQWGG*YCCWWS Trigger: TGACCACCAACAGCAATATCAGCCGCCCCATTGTCT...CCGCCTGCCCCTTTGGACCCTGGACTCGGTATACCTCCACGTGGAGTTGATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGCACACACAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGTCCATGTCATGGTGCTaGTATCCAGCTTGTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTHSLATQPDWGRAKAQSMSWC*YPACGC Trigger: ACATCCACAAGCTGGATACCAGCACCATGACATGGA...CTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTGTGTGTGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGCACACACAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGCGGTCCTTTCCCCTTTaGTTCAATCTTCTTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTHSLATQPDWGRAKAQRSFPL*FNLLPG Trigger: ACCTGGAAGAAGATTGAACCAAAGGGGAAAGGACCG...CTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTGTGTGTGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCATCAACTCCACGTGGAGGTATACCGAGTCCAGGGTCCAAAGGGGCAGGCAGACGGTGTCATCAATaGGGACGGTTGAGTGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPSTPRGGIPSPGSKGAGRRCHQ*GRLSAH Trigger: ATGGGCACTCAACCGTCCTCATTGATGACACCGTCT...GCCTGCCCCTTTGGACCCTGGACTCGGTATACCTCCACGTGGAGTTGATGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCATCAACTCCACGTGGAGGTATACCGAGTCCAGGGTCCAAAGGGGCAGGCAGACAATGGGGCGGCTaGTATTGCTGTTGGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPSTPRGGIPSPGSKGAGRQWGG*YCCWWS Trigger: TGACCACCAACAGCAATATCAGCCGCCCCATTGTCT...GCCTGCCCCTTTGGACCCTGGACTCGGTATACCTCCACGTGGAGTTGATGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR GCA 90 bp | GGCTCAAGGAGGCAGGAATGTCTTAGAATGACCAAGAGGAGGCAATGTCTCATGAGGCTGAATGGCTCCTaGGCCCCTCAGGCAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: GSRRQECLRMTKRRQCLMRLNGS*APQAAP Trigger: CGGTGCTGCCTGAGGGGCGCAGGAGCCATTCAGCCT...CATGAGACATTGCCTCCTCTTGGTCATTCTAAGACATTCCTGCCTCCTTGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCTCAGCTCCCGGGCGATGCTCAAGCAGGGAGAGGGTGGTCATGGGGAGAGATGCCGATTCAGCCTTaGATTGTAGCCACCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSQLPGDAQAGRGWSWGEMPIQP*IVATKD Trigger: ATCTTTGGTGGCTACAATGCAAGGCTGAATCGGCAT...CTCTCCCCATGACCACCCTCTCCCTGCTTGAGCATCGCCCGGGAGCTGAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR TCA 90 bp | TCCAGCACACACAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGGCAAGGACACAGCATTaGAAATGTGCACATCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SSTHSLATQPDWGRAKAQARTQH*KCAHLS Trigger: AGATAGATGTGCACATTTTCAATGCTGTGTCCTTGC...CTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTGTGTGTGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR TCA 90 bp | TCCAGCACACACAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGAGTCAGAATGATCTATaGGGTCAAATTCATCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTHSLATQPDWGRAKAQSQNDL*GQIHPP Trigger: TGGGGGATGAATTTGACCTCATAGATCATTCTGACT...CTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTGTGTGTGCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCATCAACTCCACGTGGAGGTATACCGAGTCCAGGGTCCAAAGGGGCAGGCGAGTCCATGTCATGGTaGTGGTATCCAGCTTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPSTPRGGIPSPGSKGAGESMSW*WYPACG Trigger: TCCACAAGCTGGATACCAGCACCATGACATGGACTC...GCCTGCCCCTTTGGACCCTGGACTCGGTATACCTCCACGTGGAGTTGATGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGCTTCTGAGCGTGGCTCGAACAATCCAGAATGTTTTCTTCCAGAGCTGATGGTTCACCCTGCGTaGCCCGCCCTCCAGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRASERGSNNPECFLPELMVHPA*PALQMH Trigger: GTGCATCTGGAGGGCGGGCCACGCAGGGTGAACCAT...CAGCTCTGGAAGAAAACATTCTGGATTGTTCGAGCCACGCTCAGAAGCTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR CCA 90 bp | AACAGCTCAAGGAAGGGTGAAGCTGTCTGTTGGTCCCCACCACCGCGGGTTGGGCAAGAGTCCATGTCATaGTGCTGGTATCCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSSRKGEAVCWSPPPRVGQESMS*CWYPAC Trigger: ACAAGCTGGATACCAGCACCATGACATGGACTCTTG...CCCAACCCGCGGTGGTGGGGACCAACAGACAGCTTCACCCTTCCTTGAGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCATCAACTCCACGTGGAGGTATACCGAGTCCAGGGTCCAAAGGGGCAGGCGCCAGGCCTCCGTTCTaGTATCAAAGACTCGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: SPSTPRGGIPSPGSKGAGARPPF*YQRLEF Trigger: GAATTCGAGTCTTTGATACCAGAACGGAGGCCTGGC...GCCTGCCCCTTTGGACCCTGGACTCGGTATACCTCCACGTGGAGTTGATGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR TCA 90 bp | TTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGTGGAGGTATACCGACCCAGGAACTGCCCCTaGCACTCGGGGTGTAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: FTAQKTPLVHQLHVEVYRPRNCP*HSGCRP Trigger: TGGTCTACACCCCGAGTGTCAGGGGCAGTTCCTGGG...TCGGTATACCTCCACGTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGTGGCCCAGCATTGTGGCTaGGTGGAAGTCCCTCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: LPTEFTAQKTPLVHQLHVAQHCG*VEVPPT Trigger: CGTTGGAGGGACTTCCACTCAGCCACAATGCTGGGC...CACGTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCATCAACTCCACGTGGAGGTATACCGAGTCCAGGGTCCAAAGGGGCAGGCCCAAAGACATACATGTaGTTGCCCAGCATTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPSTPRGGIPSPGSKGAGPKTYM*LPSIVA Trigger: AGCCACAATGCTGGGCAATCACATGTATGTCTTTGG...GCCTGCCCCTTTGGACCCTGGACTCGGTATACCTCCACGTGGAGTTGATGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR TCA 90 bp | AACAGCTCAAGGAAGGGTGAAGCTGTCTGTTGGTCCCCACCACCGCGGGTTGGGATCTCATTGTTGGAATaGAATGGCCCAAAGCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSSRKGEAVCWSPPPRVGISLLE*NGPKRS Trigger: AGACCGCTTTGGGCCATTTCATTCCAACAATGAGAT...CCCAACCCGCGGTGGTGGGGACCAACAGACAGCTTCACCCTTCCTTGAGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGCACACACAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGAGTAGATCTCATTGTTaGAATGAAATGGCCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSTHSLATQPDWGRAKAQSRSHC*NEMAQS Trigger: GCTTTGGGCCATTTCATTCCAACAATGAGATCTACT...CTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTGTGTGTGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGCTTCTGAGCGTGGCTCGAACAATCCAGAATGTTTTCTTCCAGAGCTGCCGCTGCTGATGTCATaGGGCAGACAGGACTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRASERGSNNPECFLPELPLLMS*GRQDWS Trigger: GGACCAGTCCTGTCTGCCCCATGACATCAGCAGCGG...CAGCTCTGGAAGAAAACATTCTGGATTGTTCGAGCCACGCTCAGAAGCTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR TCA 90 bp | TCCATCAACTCCACGTGGAGGTATACCGAGTCCAGGGTCCAAAGGGGCAGGCGGGCAAGGACACAGCATTaGAAATGTGCACATCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SINSTWRYTESRVQRGRRARTQH*KCAHLS Trigger: AGATAGATGTGCACATTTTCAATGCTGTGTCCTTGC...CCGCCTGCCCCTTTGGACCCTGGACTCGGTATACCTCCACGTGGAGTTGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCATCAACTCCACGTGGAGGTATACCGAGTCCAGGGTCCAAAGGGGCAGGCAGACATACATGTGATTaGCCAGCATTGTGGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPSTPRGGIPSPGSKGAGRHTCD*PALWLS Trigger: ACTCAGCCACAATGCTGGGCAATCACATGTATGTCT...GCCTGCCCCTTTGGACCCTGGACTCGGTATACCTCCACGTGGAGTTGATGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR CCA 90 bp | AAACTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACACAGCCACTGCAGCATaGTTCACCCTGCGTGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KLPTEFTAQKTPLVHQLHTATAA*FTLRGP Trigger: CGGGCCACGCAGGGTGAACCATGCTGCAGTGGCTGT...GTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGAGCTTCTGAGCGTGGCTCGAACAATCCAGAATGTTTTCTTCCAGAGCGATTGCCCAGCATTGTaGCTGAGTGGAAGTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAELLSVARTIQNVFFQSDCPAL*LSGSPS Trigger: GGAGGGACTTCCACTCAGCCACAATGCTGGGCAATC...GCTCTGGAAGAAAACATTCTGGATTGTTCGAGCCACGCTCAGAAGCTCTGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGTGTCCCACCTGATGTCATaGGGCAGACAGGACTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPTEFTAQKTPLVHQLHVSHLMS*GRQDWS Trigger: GGACCAGTCCTGTCTGCCCCATGACATCAGGTGGGA...CACGTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR TCA 90 bp | GCAGCAGAGCTTCTGAGCGTGGCTCGAACAATCCAGAATGTTTTCTTCCAGAGCAGACGGTGTCATCAATaGGGACGGTTGAGTGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AAELLSVARTIQNVFFQSRRCHQ*GRLSAH Trigger: ATGGGCACTCAACCGTCCTCATTGATGACACCGTCT...GCTCTGGAAGAAAACATTCTGGATTGTTCGAGCCACGCTCAGAAGCTCTGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR GCA 90 bp | CACACGCCTTTAATCCCAGCATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAAAGGAATATACTCGGTaGCCGACAGCCACTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTPLIPAFGRRGQPGLYRKEYTR*PTATAA Trigger: TGCTGCAGTGGCTGTCGGGCACCGAGTATATTCCTT...TCTGTATAGACCTGGCTGGCCTCTCCTTCCAAATGCTGGGATTAAAGGCGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR GCA 90 bp | TTAATCCCAGCATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAGAAACCCTGCCCCTTCAGTGTCATTaGGCCCACCCCAAAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIPAFGRRGQPGLYRETLPLQCH*AHPKGR Trigger: TCTTCCTTTGGGGTGGGCGCAATGACACTGAAGGGG...CAGGGTTTCTCTGTATAGACCTGGCTGGCCTCTCCTTCCAAATGCTGGGATTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR CCA 90 bp | AACAGCTCAAGGAAGGGTGAAGCTGTCTGTTGGTCCCCACCACCGCGGGTTGGGAGTAGATCTCATTGTTaGAATGAAATGGCCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSSRKGEAVCWSPPPRVGSRSHC*NEMAQS Trigger: GCTTTGGGCCATTTCATTCCAACAATGAGATCTACT...CCCAACCCGCGGTGGTGGGGACCAACAGACAGCTTCACCCTTCCTTGAGCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR CCA 90 bp | AAACTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACACAATACAGCAACACTaGCGGCGGCGGGGACACGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLPTEFTAQKTPLVHQLHTIQQH*RRRGHG Trigger: ACCGTGTCCCCGCCGCCGCCAGTGTTGCTGTATTGT...GTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR GCA 90 bp | CTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGTGAAGGAATATACTCGGTaGCCGACAGCCACTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPTEFTAQKTPLVHQLHVKEYTR*PTATAA Trigger: TGCTGCAGTGGCTGTCGGGCACCGAGTATATTCCTT...CACGTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR CCA 90 bp | TTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGTGGAGGTATACCGAGATTGCCCAGCATTGTaGCTGAGTGGAAGTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTAQKTPLVHQLHVEVYRDCPAL*LSGSPS Trigger: GGAGGGACTTCCACTCAGCCACAATGCTGGGCAATC...TCGGTATACCTCCACGTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR CCA 90 bp | CACACGCCTTTAATCCCAGCATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAGCCAGGCCTCCGTTCTaGTATCAAAGACTCGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: HTPLIPAFGRRGQPGLYRARPPF*YQRLEF Trigger: GAATTCGAGTCTTTGATACCAGAACGGAGGCCTGGC...TCTGTATAGACCTGGCTGGCCTCTCCTTCCAAATGCTGGGATTAAAGGCGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR CCA 90 bp | AATCCAGAATGTTTTCTTCCAGAGCTGATTGATAGCTGTCACGTGATGGCAGCAACAATACAGCAACACTaGCGGCGGCGGGGACACGGT | + |
|
Preference number: 4 (lower is better) Translates to: NPECFLPELIDSCHVMAATIQQH*RRRGHG Trigger: ACCGTGTCCCCGCCGCCGCCAGTGTTGCTGTATTGT...TGCTGCCATCACGTGACAGCTATCAATCAGCTCTGGAAGAAAACATTCTGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGTGATCAATGAGGACGGTTaGGTGCCCATAGCGCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPTEFTAQKTPLVHQLHVINEDG*VPIAHV Trigger: TACATGCGCTATGGGCACTCAACCGTCCTCATTGAT...CACGTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR TCA 90 bp | AATCCCAGCATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAGAAACCCTGTCCCCCAAAAATGTACATaGTCTTGCCCAGGACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: NPSIWKERPARSIQRNPVPQKCT*SCPGHK Trigger: CTTGTGTCCTGGGCAAGATCATGTACATTTTTGGGG...GACAGGGTTTCTCTGTATAGACCTGGCTGGCCTCTCCTTCCAAATGCTGGGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGCATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAGAAACCCTGTCTCGAGTCAGAATGATCTATaGGGTCAAATTCATCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSIWKERPARSIQRNPVSSQNDL*GQIHPP Trigger: TGGGGGATGAATTTGACCTCATAGATCATTCTGACT...CGAGACAGGGTTTCTCTGTATAGACCTGGCTGGCCTCTCCTTCCAAATGCTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGTGGAGTCCATGTCATGGTaGTGGTATCCAGCTTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPTEFTAQKTPLVHQLHVESMSW*WYPACG Trigger: TCCACAAGCTGGATACCAGCACCATGACATGGACTC...CACGTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR GCA 90 bp | AATCCAGAATGTTTTCTTCCAGAGCTGATTGATAGCTGTCACGTGATGGCAGCATGGCCCAAAGCGGTCTaGACGGCCCCCAAAGACATA | + |
|
Preference number: 4 (lower is better) Translates to: NPECFLPELIDSCHVMAAWPKAV*TAPKDI Trigger: TATGTCTTTGGGGGCCGTGCAGACCGCTTTGGGCCA...TGCTGCCATCACGTGACAGCTATCAATCAGCTCTGGAAGAAAACATTCTGGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGCAGAGCTTCTGAGCGTGGCTCGAACAATCCAGAATGTTTTCTTCCAGCAGAGGTCATGGAAATaGCGATTCAGCCTTGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RAAELLSVARTIQNVFFQQRSWK*RFSLAL Trigger: CAATGCAAGGCTGAATCGGCATTTCCATGACCTCTG...CTGGAAGAAAACATTCTGGATTGTTCGAGCCACGCTCAGAAGCTCTGCTGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR CCA 90 bp | ATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAGAAACCCTGTCTCGGGAAACTCCATGTCATGGTGCTaGTATCCAGCTTGTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: IWKERPARSIQRNPVSGNSMSWC*YPACGC Trigger: ACATCCACAAGCTGGATACCAGCACCATGACATGGA...GTTTCCCGAGACAGGGTTTCTCTGTATAGACCTGGCTGGCCTCTCCTTCCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGCAGAGCTTCTGAGCGTGGCTCGAACAATCCAGAATGTTTTCTTCCAGCAAGAGTCCATGTCATaGTGCTGGTATCCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RAAELLSVARTIQNVFFQQESMS*CWYPAC Trigger: ACAAGCTGGATACCAGCACCATGACATGGACTCTTG...CTGGAAGAAAACATTCTGGATTGTTCGAGCCACGCTCAGAAGCTCTGCTGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR CCA 90 bp | AAACCTGGCTCAAGGAGGCAGGAATGTCTTAGAATGACCAAGAGGAGGCAATGTAGCATTGTGGCTGAGTaGAAGTCCCTCCAACGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPGSRRQECLRMTKRRQCSIVAE*KSLQRA Trigger: TGCACGTTGGAGGGACTTCCACTCAGCCACAATGCT...ACATTGCCTCCTCTTGGTCATTCTAAGACATTCCTGCCTCCTTGAGCCAGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGTGGCCAGGCCTCCGTTCTaGTATCAAAGACTCGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LPTEFTAQKTPLVHQLHVARPPF*YQRLEF Trigger: GAATTCGAGTCTTTGATACCAGAACGGAGGCCTGGC...CACGTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGCTTCTGAGCGTGGCTCGAACAATCCAGAATGTTTTCTTCCAGAGCTGCCAAAGACATACATGTaGTTGCCCAGCATTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRASERGSNNPECFLPELPKTYM*LPSIVA Trigger: AGCCACAATGCTGGGCAATCACATGTATGTCTTTGG...CAGCTCTGGAAGAAAACATTCTGGATTGTTCGAGCCACGCTCAGAAGCTCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| CDS-3UTR TCA 90 bp | AATCCCAGCATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAGAAACCCTGTCATCTCATTGTTGGAATaGAATGGCCCAAAGCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NPSIWKERPARSIQRNPVISLLE*NGPKRS Trigger: AGACCGCTTTGGGCCATTTCATTCCAACAATGAGAT...GACAGGGTTTCTCTGTATAGACCTGGCTGGCCTCTCCTTCCAAATGCTGGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR GCA 90 bp | AAACTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACAAGGAATATACTCGGTaGCCGACAGCCACTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLPTEFTAQKTPLVHQLHKEYTR*PTATAA Trigger: TGCTGCAGTGGCTGTCGGGCACCGAGTATATTCCTT...GTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR CCA 90 bp | CTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGTGCAAGAGTCCATGTCATaGTGCTGGTATCCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPTEFTAQKTPLVHQLHVQESMS*CWYPAC Trigger: ACAAGCTGGATACCAGCACCATGACATGGACTCTTG...CACGTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR CCA 90 bp | AATCCCAGCATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAGAAACCCTGTCAACTTCCAGAGGTCATaGAAATGCCGATTCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NPSIWKERPARSIQRNPVNFQRS*KCRFSL Trigger: AAGGCTGAATCGGCATTTCCATGACCTCTGGAAGTT...GACAGGGTTTCTCTGTATAGACCTGGCTGGCCTCTCCTTCCAAATGCTGGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCAGCAGAGCTTCTGAGCGTGGCTCGAACAATCCAGAATGTTTTCTTCCAGGCAAGGACACAGCATTaGAAATGTGCACATCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: RAAELLSVARTIQNVFFQARTQH*KCAHLS Trigger: AGATAGATGTGCACATTTTCAATGCTGTGTCCTTGC...CTGGAAGAAAACATTCTGGATTGTTCGAGCCACGCTCAGAAGCTCTGCTGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR TCA 90 bp | TTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGTGGAGGTATACCGACCCCAAAAATGTACATaGTCTTGCCCAGGACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTAQKTPLVHQLHVEVYRPQKCT*SCPGHK Trigger: CTTGTGTCCTGGGCAAGATCATGTACATTTTTGGGG...TCGGTATACCTCCACGTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR GCA 90 bp | AAACAAACAAAACTATGTAGGGCAGCAGAGCTTCTGAGCGTGGCTCGAACAATCGAGTCCATGTCATGGTaGTGGTATCCAGCTTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQTKLCRAAELLSVARTIESMSW*WYPACG Trigger: TCCACAAGCTGGATACCAGCACCATGACATGGACTC...GATTGTTCGAGCCACGCTCAGAAGCTCTGCTGCCCTACATAGTTTTGTTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| CDS-3UTR GCA 90 bp | AGCAGAGCTTCTGAGCGTGGCTCGAACAATCCAGAATGTTTTCTTCCAGAGCTGAGACATACATGTGATTaGCCAGCATTGTGGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRASERGSNNPECFLPELRHTCD*PALWLS Trigger: ACTCAGCCACAATGCTGGGCAATCACATGTATGTCT...CAGCTCTGGAAGAAAACATTCTGGATTGTTCGAGCCACGCTCAGAAGCTCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGCTTCTGAGCGTGGCTCGAACAATCCAGAATGTTTTCTTCCAGAGCTGATGCCGATTCAGCCTTaGATTGTAGCCACCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRASERGSNNPECFLPELMPIQP*IVATKD Trigger: ATCTTTGGTGGCTACAATGCAAGGCTGAATCGGCAT...CAGCTCTGGAAGAAAACATTCTGGATTGTTCGAGCCACGCTCAGAAGCTCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGTGAGTCAGAATGATCTATaGGGTCAAATTCATCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPTEFTAQKTPLVHQLHVSQNDL*GQIHPP Trigger: TGGGGGATGAATTTGACCTCATAGATCATTCTGACT...CACGTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR GCA 90 bp | TTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGTGGAGGTATACCGAAGACATACATGTGATTaGCCAGCATTGTGGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTAQKTPLVHQLHVEVYRRHTCD*PALWLS Trigger: ACTCAGCCACAATGCTGGGCAATCACATGTATGTCT...TCGGTATACCTCCACGTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CCA 90 bp | CACACGCCTTTAATCCCAGCATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAAGTAGATCTCATTGTTaGAATGAAATGGCCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTPLIPAFGRRGQPGLYRSRSHC*NEMAQS Trigger: GCTTTGGGCCATTTCATTCCAACAATGAGATCTACT...TCTGTATAGACCTGGCTGGCCTCTCCTTCCAAATGCTGGGATTAAAGGCGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR CCA 90 bp | ACATCACGAAAACAAACAAAACTATGTAGGGCAGCAGAGCTTCTGAGCGTGGCTCGGTCCTTTCCCCTTTaGTTCAATCTTCTTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSRKQTKLCRAAELLSVARSFPL*FNLLPG Trigger: ACCTGGAAGAAGATTGAACCAAAGGGGAAAGGACCG...AGCCACGCTCAGAAGCTCTGCTGCCCTACATAGTTTTGTTTGTTTTCGTGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| CDS-3UTR CCA 90 bp | AAACTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACAACTTCCAGAGGTCATaGAAATGCCGATTCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLPTEFTAQKTPLVHQLHNFQRS*KCRFSL Trigger: AAGGCTGAATCGGCATTTCCATGACCTCTGGAAGTT...GTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CAA 90 bp | CAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGGAGCGGTGGAGATGGGGCGGCTGATATaGCTGTTGGTGGTCATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QPGYPARLGQSKGPGAVEMGRLI*LLVVMA Trigger: CGCCATGACCACCAACAGCAATATCAGCCGCCCCAT...CTCCACCGCTCCTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CAA 90 bp | CAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCAGGAGCGGTGGAGTTGGTGGTCATGGCGTaGAGCTCCCACCTGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QPGYPARLGQSKGPGAVELVVMA*SSHLMS Trigger: TGACATCAGGTGGGAGCTCAACGCCATGACCACCAA...CTCCACCGCTCCTGGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CAA 90 bp | CCGCGGGTTGGGGAGGGGGTTTCATGCCAACAGCCGAGGCTCCTCTCAGCTCCCCGGCTGATATTGCTGTaGGTGGTCATGGCGTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRVGEGVSCQQPRLLSAPRLILL*VVMALS Trigger: GCTCAACGCCATGACCACCAACAGCAATATCAGCCG...GGGAGCTGAGAGGAGCCTCGGCTGTTGGCATGAAACCCCCTCCCCAACCCGCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CAA 90 bp | TCCTCTCAGCTCCCGGGCGATGCTCAAGCAGGGAGAGGGTGGTCATGGGGAGAGATGGGGCGGCTGATATaGCTGTTGGTGGTCATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSQLPGDAQAGRGWSWGEMGRLI*LLVVMA Trigger: CGCCATGACCACCAACAGCAATATCAGCCGCCCCAT...CTCTCCCCATGACCACCCTCTCCCTGCTTGAGCATCGCCCGGGAGCTGAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS GCA 90 bp | AGAGCAGTAACCCCCGAAGGAATATACTCGGTGCCCGACAGCCACTaGAGCATGGTTCACCCTGCGTGGCCCGCCCTCCAGATGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: RAVTPEGIYSVPDSH*SMVHPAWPALQMHC Trigger: ACAGTGCATCTGGAGGGCGGGCCACGCAGGGTGAACCATGCTGCAGTGGCTGTCGGGCACCGAGTATATTCCTTCGGGGGTTACTGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS TCA 90 bp | ATTGCGCCCACCCCAAAGGAAGACGGTGTCATCAATGAGGACGGTTaGGTGCCCATAGCGCATGTAGGGAACGACAGGAGCCTGCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: IAPTPKEDGVINEDG*VPIAHVGNDRSLPS Trigger: CGAGGGCAGGCTCCTGTCGTTCCCTACATGCGCTATGGGCACTCAACCGTCCTCATTGATGACACCGTCTTCCTTTGGGGTGGGCGCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233524.2 ENSMUST00000233733.2 |
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| CDS-3UTR CAA 90 bp | TCCTCTCAGCTCCCGGGCGATGCTCAAGCAGGGAGAGGGTGGTCATGGGGAGAGGTGCTGGTATCCAGCTaGTGGATGTCGTTGGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSQLPGDAQAGRGWSWGEVLVSS*WMSLEK Trigger: CTTTTCCAACGACATCCACAAGCTGGATACCAGCAC...CTCTCCCCATGACCACCCTCTCCCTGCTTGAGCATCGCCCGGGAGCTGAGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CAA 90 bp | CACCGCGGGTTGGGGAGGGGGTTTCATGCCAACAGCCGAGGCTCCTCTCAGCTCGTGCAGGATTGCCCTTaGTACAAACAAGAGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: HRGLGRGFHANSRGSSQLVQDCP*YKQESM Trigger: CATGGACTCTTGTTTGTACAAAGGGCAATCCTGCAC...GAGCTGAGAGGAGCCTCGGCTGTTGGCATGAAACCCCCTCCCCAACCCGCGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CAA 90 bp | TCCTCTCAGCTCCCGGGCGATGCTCAAGCAGGGAGAGGGTGGTCATGGGGAGAGACGGTCCTTTCCCCTTaGGTTCAATCTTCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSQLPGDAQAGRGWSWGETVLSP*VQSSSR Trigger: CCTGGAAGAAGATTGAACCAAAGGGGAAAGGACCGT...CTCTCCCCATGACCACCCTCTCCCTGCTTGAGCATCGCCCGGGAGCTGAGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CAA 90 bp | CACCGCGGGTTGGGGAGGGGGTTTCATGCCAACAGCCGAGGCTCCTCTCAGCTCCGCAAGGACACAGCATaGAAAATGTGCACATCTATC | + |
|
Preference number: 5 (lower is better) Translates to: HRGLGRGFHANSRGSSQLRKDTA*KMCTSI Trigger: GATAGATGTGCACATTTTCAATGCTGTGTCCTTGCG...GAGCTGAGAGGAGCCTCGGCTGTTGGCATGAAACCCCCTCCCCAACCCGCGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CAA 90 bp | TCCTCTCAGCTCCCGGGCGATGCTCAAGCAGGGAGAGGGTGGTCATGGGGAGAGGTGCAGGATTGCCCTTaGTACAAACAAGAGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SSQLPGDAQAGRGWSWGEVQDCP*YKQESM Trigger: CATGGACTCTTGTTTGTACAAAGGGCAATCCTGCAC...CTCTCCCCATGACCACCCTCTCCCTGCTTGAGCATCGCCCGGGAGCTGAGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS TCA 90 bp | CCGCTGCTGATGTCATGGGGCAGACAGGACTGGTCCAGGCTATACTaGATCACCGCCAGCTTGCACAGAGTCTTCAGACTAGGGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLLMSWGRQDWSRLY*ITASLHRVFRLGLK Trigger: CTTCAGCCCTAGTCTGAAGACTCTGTGCAAGCTGGCGGTGATTCAGTATAGCCTGGACCAGTCCTGTCTGCCCCATGACATCAGCAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| CDS GCA 90 bp | ATGGCCCAAAGCGGTCTGCACGGCCCCCAAAGACATACATGTGATTaGCCAGCATTGTGGCTGAGTGGAAGTCCCTCCAACGTGCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: MAQSGLHGPQRHTCD*PALWLSGSPSNVQD Trigger: ATCCTGCACGTTGGAGGGACTTCCACTCAGCCACAATGCTGGGCAATCACATGTATGTCTTTGGGGGCCGTGCAGACCGCTTTGGGCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS TCA 90 bp | CTTCAGTGTCATTGCGCCCACCCCAAAGGAAGACGGTGTCATCAATaGGGACGGTTGAGTGCCCATAGCGCATGTAGGGAACGACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LQCHCAHPKGRRCHQ*GRLSAHSACRERQE Trigger: CTCCTGTCGTTCCCTACATGCGCTATGGGCACTCAACCGTCCTCATTGATGACACCGTCTTCCTTTGGGGTGGGCGCAATGACACTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233524.2 ENSMUST00000233733.2 |
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| CDS TCA 90 bp | TCCCACCTGATGTCATGGGGCAGACAGGACTGGTCCAGGCTATACTaGATCACCGCCAGCTTGCACAGAGTCTTCAGACTAGGGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SHLMSWGRQDWSRLY*ITASLHRVFRLGLK Trigger: CTTCAGCCCTAGTCTGAAGACTCTGTGCAAGCTGGCGGTGATTCAGTATAGCCTGGACCAGTCCTGTCTGCCCCATGACATCAGGTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS CCA 90 bp | GGTCTGCACGGCCCCCAAAGACATACATGTGATTGCCCAGCATTGTaGCTGAGTGGAAGTCCCTCCAACGTGCAGGATTGCCCTTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GLHGPQRHTCDCPAL*LSGSPSNVQDCPLY Trigger: GTACAAAGGGCAATCCTGCACGTTGGAGGGACTTCCACTCAGCCACAATGCTGGGCAATCACATGTATGTCTTTGGGGGCCGTGCAGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS-3UTR CAA 90 bp | TTTCCAGCACACACAGCCTGGCTACCCAGCCAGACTGGGGCAGAGCAAAGGCCCCGCAAGGACACAGCATaGAAAATGTGCACATCTATC | + |
|
Preference number: 5 (lower is better) Translates to: FPAHTAWLPSQTGAEQRPRKDTA*KMCTSI Trigger: GATAGATGTGCACATTTTCAATGCTGTGTCCTTGCG...GGGCCTTTGCTCTGCCCCAGTCTGGCTGGGTAGCCAGGCTGTGTGTGCTGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CAA 90 bp | AACAGCTCAAGGAAGGGTGAAGCTGTCTGTTGGTCCCCACCACCGCGGGTTGGGAATGCCGATTCAGCCTaGCATTGTAGCCACCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NSSRKGEAVCWSPPPRVGNADSA*HCSHQR Trigger: TCTTTGGTGGCTACAATGCAAGGCTGAATCGGCATT...CCCAACCCGCGGTGGTGGGGACCAACAGACAGCTTCACCCTTCCTTGAGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CAA 90 bp | AGTCCATCAACTCCACGTGGAGGTATACCGAGTCCAGGGTCCAAAGGGGCAGGCACGGTCCTTTCCCCTTaGGTTCAATCTTCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSTPRGGIPSPGSKGAGTVLSP*VQSSSR Trigger: CCTGGAAGAAGATTGAACCAAAGGGGAAAGGACCGT...GCCTGCCCCTTTGGACCCTGGACTCGGTATACCTCCACGTGGAGTTGATGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS CCA 90 bp | CAGGCAGCACCGGCGTGTGAGGACAGTCGAGCCAGGCCTCCGTTCTaGTATCAAAGACTCGAATTCGATTACAGTAGATCTCATTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QAAPACEDSRARPPF*YQRLEFDYSRSHCW Trigger: CCAACAATGAGATCTACTGTAATCGAATTCGAGTCTTTGATACCAGAACGGAGGCCTGGCTCGACTGTCCTCACACGCCGGTGCTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
||
| CDS-3UTR CAA 90 bp | CAGCATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAGAAACCCTGTCTCGGGACGGTCCTTTCCCCTTaGGTTCAATCTTCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QHLEGEASQVYTEKPCLGTVLSP*VQSSSR Trigger: CCTGGAAGAAGATTGAACCAAAGGGGAAAGGACCGT...CCCGAGACAGGGTTTCTCTGTATAGACCTGGCTGGCCTCTCCTTCCAAATGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
||
| CDS-3UTR CAA 90 bp | TTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGTGGAGGTATACCGATCACTGGGGGCAGCTTaGTCCAACGCAAGGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: FTAQKTPLVHQLHVEVYRSLGAA*SNARTQ Trigger: CTGTGTCCTTGCGTTGGACAAAGCTGCCCCCAGTGA...TCGGTATACCTCCACGTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS-3UTR CAA 90 bp | CTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGTGTTGGTGGTCATGGCGTaGAGCTCCCACCTGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPTEFTAQKTPLVHQLHVLVVMA*SSHLMS Trigger: TGACATCAGGTGGGAGCTCAACGCCATGACCACCAA...CACGTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS CCA 90 bp | GTGCAGGATTGCCCTTTGTACAAACAAGAGTCCATGTCATGGTGCTaGTATCCAGCTTGTGGATGTCGTTGGAAAAGCAGTCGGCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VQDCPLYKQESMSWC*YPACGCRWKSSRPA Trigger: AGCTGGCCGACTGCTTTTCCAACGACATCCACAAGCTGGATACCAGCACCATGACATGGACTCTTGTTTGTACAAAGGGCAATCCTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
||
| CDS-3UTR CAA 90 bp | AAACTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACTCACTGGGGGCAGCTTaGTCCAACGCAAGGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: KLPTEFTAQKTPLVHQLHSLGAA*SNARTQ Trigger: CTGTGTCCTTGCGTTGGACAAAGCTGCCCCCAGTGA...GTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
||
| CDS GCA 90 bp | AACGTGCAGGATTGCCCTTTGTACAAACAAGAGTCCATGTCATGGTaGTGGTATCCAGCTTGTGGATGTCGTTGGAAAAGCAGTCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NVQDCPLYKQESMSW*WYPACGCRWKSSRP Trigger: TGGCCGACTGCTTTTCCAACGACATCCACAAGCTGGATACCAGCACCATGACATGGACTCTTGTTTGTACAAAGGGCAATCCTGCACGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
||
| CDS CCA 90 bp | TCCAACGTGCAGGATTGCCCTTTGTACAAACAAGAGTCCATGTCATaGTGCTGGTATCCAGCTTGTGGATGTCGTTGGAAAAGCAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SNVQDCPLYKQESMS*CWYPACGCRWKSSR Trigger: CCGACTGCTTTTCCAACGACATCCACAAGCTGGATACCAGCACCATGACATGGACTCTTGTTTGTACAAAGGGCAATCCTGCACGTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCAGAGCTTCTGAGCGTGGCTCGAACAATCCAGAATGTTTTCTTCCAGAGCGTGCAGGATTGCCCTTaGTACAAACAAGAGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: AAELLSVARTIQNVFFQSVQDCP*YKQESM Trigger: CATGGACTCTTGTTTGTACAAAGGGCAATCCTGCAC...GCTCTGGAAGAAAACATTCTGGATTGTTCGAGCCACGCTCAGAAGCTCTGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| CDS-3UTR CAA 90 bp | ATTTGGAAGGAGAGGCCAGCCAGGTCTATACAGAGAAACCCTGTCTCGGGAAACAATGCCGATTCAGCCTaGCATTGTAGCCACCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: IWKERPARSIQRNPVSGNNADSA*HCSHQR Trigger: TCTTTGGTGGCTACAATGCAAGGCTGAATCGGCATT...GTTTCCCGAGACAGGGTTTCTCTGTATAGACCTGGCTGGCCTCTCCTTCCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| CDS-3UTR CAA 90 bp | AAACTCCCCACTGAATTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACCGGCTGATATTGCTGTaGGTGGTCATGGCGTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: KLPTEFTAQKTPLVHQLHRLILL*VVMALS Trigger: GCTCAACGCCATGACCACCAACAGCAATATCAGCCG...GTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAATTCAGTGGGGAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS TCA 90 bp | AGAGTCTTCAGACTAGGGCTGAAGTCCAAGATGTGTAAGTCAGAATaGTCTATGAGGTCAAATTCATCCCCCAGGCCTTCCTCGGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: RVFRLGLKSKMCKSE*SMRSNSSPRPSSGE Trigger: CTCTCCCGAGGAAGGCCTGGGGGATGAATTTGACCTCATAGATCATTCTGACTTACACATCTTGGACTTCAGCCCTAGTCTGAAGACTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000233733.2 |
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| CDS GCA 90 bp | ATTACAGTAGATCTCATTGTTGGAATGAAATGGCCCAAAGCGGTCTaGACGGCCCCCAAAGACATACATGTGATTGCCCAGCATTGTGGC | + |
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Preference number: 5 (lower is better) Translates to: ITVDLIVGMKWPKAV*TAPKDIHVIAQHCG Trigger: GCCACAATGCTGGGCAATCACATGTATGTCTTTGGGGGCCGTGCAGACCGCTTTGGGCCATTTCATTCCAACAATGAGATCTACTGTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS CCA 90 bp | TTTGTACAAACAAGAGTCCATGTCATGGTGCTGGTATCCAGCTTGTaGATGTCGTTGGAAAAGCAGTCGGCCAGCTGTTCATATCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: FVQTRVHVMVLVSSL*MSLEKQSASCSYPP Trigger: TGGGGGATATGAACAGCTGGCCGACTGCTTTTCCAACGACATCCACAAGCTGGATACCAGCACCATGACATGGACTCTTGTTTGTACAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS-3UTR CAA 90 bp | TTCACAGCACAGAAAACACCTCTAGTCCATCAACTCCACGTGGAGGTATACCGAGTGCTGGTATCCAGCTaGTGGATGTCGTTGGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: FTAQKTPLVHQLHVEVYRVLVSS*WMSLEK Trigger: CTTTTCCAACGACATCCACAAGCTGGATACCAGCAC...TCGGTATACCTCCACGTGGAGTTGATGGACTAGAGGTGTTTTCTGTGCTGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 |
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| CDS-3UTR CAA 90 bp | GGCTCAAGGAGGCAGGAATGTCTTAGAATGACCAAGAGGAGGCAATGTCTCATGCGCAAGGACACAGCATaGAAAATGTGCACATCTATC | + |
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Preference number: 5 (lower is better) Translates to: GSRRQECLRMTKRRQCLMRKDTA*KMCTSI Trigger: GATAGATGTGCACATTTTCAATGCTGTGTCCTTGCG...CATGAGACATTGCCTCCTCTTGGTCATTCTAAGACATTCCTGCCTCCTTGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| CDS GCA 90 bp | CCCAGGATTAAACTTCCAGAGGTCATGGAAATGCCGATTCAGCCTTaGATTGTAGCCACCAAAGATGTACAGCTCTCCATTGTAGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: PRIKLPEVMEMPIQP*IVATKDVQLSIVAK Trigger: TTTGGCTACAATGGAGAGCTGTACATCTTTGGTGGCTACAATGCAAGGCTGAATCGGCATTTCCATGACCTCTGGAAGTTTAATCCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000233733.2 |
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| CDS-3UTR CAA 90 bp | AATCCAGAATGTTTTCTTCCAGAGCTGATTGATAGCTGTCACGTGATGGCAGCAGTGCTGGTATCCAGCTaGTGGATGTCGTTGGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: NPECFLPELIDSCHVMAAVLVSS*WMSLEK Trigger: CTTTTCCAACGACATCCACAAGCTGGATACCAGCAC...TGCTGCCATCACGTGACAGCTATCAATCAGCTCTGGAAGAAAACATTCTGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233733.2 |
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| CDS CCA 90 bp | AAAGACTCGAATTCGATTACAGTAGATCTCATTGTTGGAATGAAATaGCCCAAAGCGGTCTGCACGGCCCCCAAAGACATACATGTGATT | + |
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Preference number: 5 (lower is better) Translates to: KDSNSITVDLIVGMK*PKAVCTAPKDIHVI Trigger: AATCACATGTATGTCTTTGGGGGCCGTGCAGACCGCTTTGGGCCATTTCATTCCAACAATGAGATCTACTGTAATCGAATTCGAGTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS GCA 72 bp | CTCGGTGCCCGACAGCCACTGCAGCATGGTTCACCCTaGGTGGCCCGCCCTCCAGATGCACTGTCCACCGTA | + |
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Preference number: 6 (lower is better) Translates to: LGARQPLQHGSP*VARPPDALSTV Trigger: TACGGTGGACAGTGCATCTGGAGGGCGGGCCACGCAGGGTGAACCATGCTGCAGTGGCTGTCGGGCACCGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS TCA 72 bp | GAATGGCTCCTGCGCCCCTCAGGCAGCACCGGCGTGTaGGGACAGTCGAGCCAGGCCTCCGTTCTGGTATCA | + |
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Preference number: 6 (lower is better) Translates to: EWLLRPSGSTGV*GQSSQASVLVS Trigger: TGATACCAGAACGGAGGCCTGGCTCGACTGTCCTCACACGCCGGTGCTGCCTGAGGGGCGCAGGAGCCATTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000233733.2 |
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| CDS GCA 72 bp | ACCCCCGAAGGAATATACTCGGTGCCCGACAGCCACTaGAGCATGGTTCACCCTGCGTGGCCCGCCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: TPEGIYSVPDSH*SMVHPAWPALQ Trigger: CTGGAGGGCGGGCCACGCAGGGTGAACCATGCTGCAGTGGCTGTCGGGCACCGAGTATATTCCTTCGGGGGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS CAA 72 bp | CCTGCCCTCGGACGGCAGGCCTCACTGGGGGCAGCTTaGTCCAACGCAAGGACACTAGGACAGGGAACTCCA | + |
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Preference number: 6 (lower is better) Translates to: PALGRQASLGAA*SNARTLGQGTP Trigger: TGGAGTTCCCTGTCCTAGTGTCCTTGCGTTGGACAAAGCTGCCCCCAGTGAGGCCTGCCGTCCGAGGGCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233524.2 |
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| CDS GCA 72 bp | ACAGCTCTCCATTGTAGCCAAAGGCTGAATGGCTCCTaGGCCCCTCAGGCAGCACCGGCGTGTGAGGACAGT | + |
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Preference number: 6 (lower is better) Translates to: TALHCSQRLNGS*APQAAPACEDS Trigger: ACTGTCCTCACACGCCGGTGCTGCCTGAGGGGCGCAGGAGCCATTCAGCCTTTGGCTACAATGGAGAGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000233733.2 |
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| CDS CCA 72 bp | AAGGAATATACTCGGTGCCCGACAGCCACTGCAGCATaGTTCACCCTGCGTGGCCCGCCCTCCAGATGCACT | + |
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Preference number: 6 (lower is better) Translates to: KEYTRCPTATAA*FTLRGPPSRCT Trigger: AGTGCATCTGGAGGGCGGGCCACGCAGGGTGAACCATGCTGCAGTGGCTGTCGGGCACCGAGTATATTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS CAA 90 bp | AGCGGTCTGCACGGCCCCCAAAGACATACATGTGATTGCCCAGCATaGTGGCTGAGTGGAAGTCCCTCCAACGTGCAGGATTGCCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SGLHGPQRHTCDCPA*WLSGSPSNVQDCPL Trigger: CAAAGGGCAATCCTGCACGTTGGAGGGACTTCCACTCAGCCACAATGCTGGGCAATCACATGTATGTCTTTGGGGGCCGTGCAGACCGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS GCA 72 bp | AGCGGTCTGCACGGCCCCCAAAGACATACATGTGATTaGCCAGCATTGTGGCTGAGTGGAAGTCCCTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: SGLHGPQRHTCD*PALWLSGSPSN Trigger: GTTGGAGGGACTTCCACTCAGCCACAATGCTGGGCAATCACATGTATGTCTTTGGGGGCCGTGCAGACCGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS TCA 72 bp | ACCCCAAAGGAAGACGGTGTCATCAATGAGGACGGTTaGGTGCCCATAGCGCATGTAGGGAACGACAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: TPKEDGVINEDG*VPIAHVGNDRS Trigger: GCTCCTGTCGTTCCCTACATGCGCTATGGGCACTCAACCGTCCTCATTGATGACACCGTCTTCCTTTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233524.2 ENSMUST00000233733.2 |
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| CDS TCA 72 bp | CATTGCGCCCACCCCAAAGGAAGACGGTGTCATCAATaGGGACGGTTGAGTGCCCATAGCGCATGTAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: HCAHPKGRRCHQ*GRLSAHSACRE Trigger: TTCCCTACATGCGCTATGGGCACTCAACCGTCCTCATTGATGACACCGTCTTCCTTTGGGGTGGGCGCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233524.2 ENSMUST00000233733.2 |
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| CDS CCA 72 bp | GGCCCCCAAAGACATACATGTGATTGCCCAGCATTGTaGCTGAGTGGAAGTCCCTCCAACGTGCAGGATTGC | + |
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Preference number: 6 (lower is better) Translates to: GPQRHTCDCPAL*LSGSPSNVQDC Trigger: GCAATCCTGCACGTTGGAGGGACTTCCACTCAGCCACAATGCTGGGCAATCACATGTATGTCTTTGGGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS CAA 72 bp | CACGGCCCCCAAAGACATACATGTGATTGCCCAGCATaGTGGCTGAGTGGAAGTCCCTCCAACGTGCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: HGPQRHTCDCPA*WLSGSPSNVQD Trigger: ATCCTGCACGTTGGAGGGACTTCCACTCAGCCACAATGCTGGGCAATCACATGTATGTCTTTGGGGGCCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS TCA 72 bp | ATGTCATGGGGCAGACAGGACTGGTCCAGGCTATACTaGATCACCGCCAGCTTGCACAGAGTCTTCAGACTA | + |
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Preference number: 6 (lower is better) Translates to: MSWGRQDWSRLY*ITASLHRVFRL Trigger: TAGTCTGAAGACTCTGTGCAAGCTGGCGGTGATTCAGTATAGCCTGGACCAGTCCTGTCTGCCCCATGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000233733.2 |
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| CDS CCA 72 bp | CCGGCGTGTGAGGACAGTCGAGCCAGGCCTCCGTTCTaGTATCAAAGACTCGAATTCGATTACAGTAGATCT | + |
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Preference number: 6 (lower is better) Translates to: PACEDSRARPPF*YQRLEFDYSRS Trigger: AGATCTACTGTAATCGAATTCGAGTCTTTGATACCAGAACGGAGGCCTGGCTCGACTGTCCTCACACGCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS CAA 72 bp | GCCAGCTGTTCATATCCCCCAAAAATGTACATGATCTaGCCCAGGACACAAGCTGAATGTCCGTCCCGTGCC | + |
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Preference number: 6 (lower is better) Translates to: ASCSYPPKMYMI*PRTQAECPSRA Trigger: GGCACGGGACGGACATTCAGCTTGTGTCCTGGGCAAGATCATGTACATTTTTGGGGGATATGAACAGCTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS CAA 72 bp | CATGTCATGGTGCTGGTATCCAGCTTGTGGATGTCGTaGGAAAAGCAGTCGGCCAGCTGTTCATATCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: HVMVLVSSLWMS*EKQSASCSYPP Trigger: TGGGGGATATGAACAGCTGGCCGACTGCTTTTCCAACGACATCCACAAGCTGGATACCAGCACCATGACATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS TCA 72 bp | AGTCGGCCAGCTGTTCATATCCCCCAAAAATGTACATaGTCTTGCCCAGGACACAAGCTGAATGTCCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SRPAVHIPQKCT*SCPGHKLNVRP Trigger: GGGACGGACATTCAGCTTGTGTCCTGGGCAAGATCATGTACATTTTTGGGGGATATGAACAGCTGGCCGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS GCA 72 bp | GATCTCATTGTTGGAATGAAATGGCCCAAAGCGGTCTaGACGGCCCCCAAAGACATACATGTGATTGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: DLIVGMKWPKAV*TAPKDIHVIAQ Trigger: CTGGGCAATCACATGTATGTCTTTGGGGGCCGTGCAGACCGCTTTGGGCCATTTCATTCCAACAATGAGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS CCA 72 bp | ATGTCATGGTGCTGGTATCCAGCTTGTGGATGTCGTTaGAAAAGCAGTCGGCCAGCTGTTCATATCCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: MSWCWYPACGCR*KSSRPAVHIPQ Trigger: TTGGGGGATATGAACAGCTGGCCGACTGCTTTTCCAACGACATCCACAAGCTGGATACCAGCACCATGACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS CCA 72 bp | ACAAGAGTCCATGTCATGGTGCTGGTATCCAGCTTGTaGATGTCGTTGGAAAAGCAGTCGGCCAGCTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: TRVHVMVLVSSL*MSLEKQSASCS Trigger: TGAACAGCTGGCCGACTGCTTTTCCAACGACATCCACAAGCTGGATACCAGCACCATGACATGGACTCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS CAA 72 bp | CAAACAAGAGTCCATGTCATGGTGCTGGTATCCAGCTaGTGGATGTCGTTGGAAAAGCAGTCGGCCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: QTRVHVMVLVSS*WMSLEKQSASC Trigger: ACAGCTGGCCGACTGCTTTTCCAACGACATCCACAAGCTGGATACCAGCACCATGACATGGACTCTTGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS CAA 90 bp | CCCTTTGTACAAACAAGAGTCCATGTCATGGTGCTGGTATCCAGCTaGTGGATGTCGTTGGAAAAGCAGTCGGCCAGCTGTTCATATCCC | + |
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Preference number: 6 (lower is better) Translates to: PFVQTRVHVMVLVSS*WMSLEKQSASCSYP Trigger: GGGATATGAACAGCTGGCCGACTGCTTTTCCAACGACATCCACAAGCTGGATACCAGCACCATGACATGGACTCTTGTTTGTACAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS TCA 72 bp | AGACTAGGGCTGAAGTCCAAGATGTGTAAGTCAGAATaGTCTATGAGGTCAAATTCATCCCCCAGGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RLGLKSKMCKSE*SMRSNSSPRPS Trigger: GGAAGGCCTGGGGGATGAATTTGACCTCATAGATCATTCTGACTTACACATCTTGGACTTCAGCCCTAGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000233733.2 |
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| CDS GCA 72 bp | GATTGCCCTTTGTACAAACAAGAGTCCATGTCATGGTaGTGGTATCCAGCTTGTGGATGTCGTTGGAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: DCPLYKQESMSW*WYPACGCRWKS Trigger: GCTTTTCCAACGACATCCACAAGCTGGATACCAGCACCATGACATGGACTCTTGTTTGTACAAAGGGCAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS CCA 72 bp | TGCCCTTTGTACAAACAAGAGTCCATGTCATGGTGCTaGTATCCAGCTTGTGGATGTCGTTGGAAAAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: CPLYKQESMSWC*YPACGCRWKSS Trigger: ACTGCTTTTCCAACGACATCCACAAGCTGGATACCAGCACCATGACATGGACTCTTGTTTGTACAAAGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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| CDS CCA 72 bp | CAGGATTGCCCTTTGTACAAACAAGAGTCCATGTCATaGTGCTGGTATCCAGCTTGTGGATGTCGTTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: QDCPLYKQESMS*CWYPACGCRWK Trigger: TTTCCAACGACATCCACAAGCTGGATACCAGCACCATGACATGGACTCTTGTTTGTACAAAGGGCAATCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071841.7 ENSMUST00000165007.9 ENSMUST00000232776.2 ENSMUST00000233733.2 |
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