Pregenerated sensors for KLF9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033863Ensembl transcript IDs: ENSMUST00000036884.3
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCTGTCGTATTGGAAGTCGGAGTCAGCTGTGCCCTGTGCCCACTaGAGGAGCAACCACGCTGAGATGGGGGTGAGCATGCGCTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: WLSYWKSESAVPCAH*RSNHAEMGVSMRWV Trigger: CACCCAGCGCATGCTCACCCCCATCTCAGCGTGGTTGCTCCTGCAGTGGGCACAGGGCACAGCTGACTCCGACTTCCAATACGACAGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR CCA 90 bp | GCAGGGAGATATCAGAATATTGGCCAAAGAAGCAGTGACCTCCTGTaGCCAGCGCGCCTCTGCTGTGGCAGATTTCCATGTGTCAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: AGRYQNIGQRSSDLL*PARLCCGRFPCVSL Trigger: CAGACTGACACATGGAAATCTGCCACAGCAGAGGCGCGCTGGCCACAGGAGGTCACTGCTTCTTTGGCCAATATTCTGATATCTCCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR TCA 90 bp | TGGAAACAGTGCAGGGAGATATCAGAATATTGGCCAAAGAAGCAGTaGCCTCCTGTGGCCAGCGCGCCTCTGCTGTGGCAGATTTCCATG | + |
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Preference number: 1 (lower is better) Translates to: WKQCREISEYWPKKQ*PPVASAPLLWQISM Trigger: CATGGAAATCTGCCACAGCAGAGGCGCGCTGGCCACAGGAGGTCACTGCTTCTTTGGCCAATATTCTGATATCTCCCTGCACTGTTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR GCA 90 bp | CACTCCCCTCCTCCTCCCCCTCGTCAGCATGTGTTTCATATGTTCTaGCCTCCCATCTTTGCCATAGGTTCTCAGGGAAATGTGTATACT | + |
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Preference number: 1 (lower is better) Translates to: HSPPPPPRQHVFHMF*PPIFAIGSQGNVYT Trigger: AGTATACACATTTCCCTGAGAACCTATGGCAAAGATGGGAGGGCAGAACATATGAAACACATGCTGACGAGGGGGAGGAGGAGGGGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR GCA 90 bp | TTCACGTGCGTTTCTTTGACCTATGTTCACCAGAAGGGACTGTTCTaGAGAGTGGCCTCTGAAGTCATTCATTGTGGCGTCTTCCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: FTCVSLTYVHQKGLF*RVASEVIHCGVFLP Trigger: GGGAAGGAAGACGCCACAATGAATGACTTCAGAGGCCACTCTGCAGAACAGTCCCTTCTGGTGAACATAGGTCAAAGAAACGCACGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR TCA 90 bp | TTTGACCTATGTTCACCAGAAGGGACTGTTCTGCAGAGTGGCCTCTaGAGTCATTCATTGTGGCGTCTTCCTTCCCTAGACACTTACTAC | + |
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Preference number: 1 (lower is better) Translates to: FDLCSPEGTVLQSGL*SHSLWRLPSLDTYY Trigger: GTAGTAAGTGTCTAGGGAAGGAAGACGCCACAATGAATGACTTCAGAGGCCACTCTGCAGAACAGTCCCTTCTGGTGAACATAGGTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR GCA 90 bp | ATGTGGAGCTCACTGCAGGTGGGAACCCCGAGTTTACACACCATGTaGAAACTAGAGTGCACCATAGCTCCCTGTTTTAAATATCAGATA | + |
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Preference number: 1 (lower is better) Translates to: MWSSLQVGTPSLHTM*KLECTIAPCFKYQI Trigger: TATCTGATATTTAAAACAGGGAGCTATGGTGCACTCTAGTTTGCACATGGTGTGTAAACTCGGGGTTCCCACCTGCAGTGAGCTCCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR GCA 90 bp | CTGAGAGAACTACTGATACAACTACATTGGTTAAACAGAAAACACTaGGCTAGTGATGGCTGTCGTATTGGAAGTCGGAGTCAGCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: LRELLIQLHWLNRKH*ASDGCRIGSRSQLC Trigger: GCACAGCTGACTCCGACTTCCAATACGACAGCCATCACTAGCGCAGTGTTTTCTGTTTAACCAATGTAGTTGTATCAGTAGTTCTCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR CCA 90 bp | GGGGACCAAATGTTGACTTTGACCTTAGGGCTACCATGTGCTTTTTaGAAACAGTGCAGGGAGATATCAGAATATTGGCCAAAGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: GDQMLTLTLGLPCAF*KQCREISEYWPKKQ Trigger: CTGCTTCTTTGGCCAATATTCTGATATCTCCCTGCACTGTTTCCAAAAAGCACATGGTAGCCCTAAGGTCAAAGTCAACATTTGGTCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR CCA 90 bp | TGTCCTAGTCCCGAGCGTGGAACGAGACGGCGTTATCAGAAAGCATaGGGGAATTCAAACAAATTCATGAAGTTAAAATTGTTTGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: CPSPERGTRRRYQKA*GNSNKFMKLKLFAH Trigger: ATGAGCAAACAATTTTAACTTCATGAATTTGTTTGAATTCCCCCATGCTTTCTGATAACGCCGTCTCGTTCCACGCTCGGGACTAGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR TCA 90 bp | AGTGCAGTTTATGTTCAGATAGTACAATTCATACGAAGCAAGGTTTaGAAGTTCCGGACTTATCGTGACCCCTCGAAGGTCTGTCTTGAT | + |
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Preference number: 1 (lower is better) Translates to: SAVYVQIVQFIRSKV*KFRTYRDPSKVCLD Trigger: ATCAAGACAGACCTTCGAGGGGTCACGATAAGTCCGGAACTTTCAAACCTTGCTTCGTATGAATTGTACTATCTGAACATAAACTGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR TCA 90 bp | TGTAAAGATCAGTATCTTACAGTGTTCCAGACCATTCATCCGCTGTaGAAGAACATCTTATCTACCCAGAGTGATGAGTACTGTGCTAAA | + |
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Preference number: 1 (lower is better) Translates to: CKDQYLTVFQTIHPL*KNILSTQSDEYCAK Trigger: TTTAGCACAGTACTCATCACTCTGGGTAGATAAGATGTTCTTTCACAGCGGATGAATGGTCTGGAACACTGTAAGATACTGATCTTTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR-3UTR GCA 90 bp | GTTAATGTGATTCAAGAGAGTGGTTCTGCTAAACAAACTGAAGCACACCGGTCGCCGGGGACCCATCTCTaGCTGGCTGCCATGGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: VNVIQESGSAKQTEAHRSPGTHL*LAAMGS Trigger: GCTCCCCATGGCAGCCAGGCAGAGATGGGTCCCCGG...CGACCGGTGTGCTTCAGTTTGTTTAGCAGAACCACTCTCTTGAATCACATTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTGCAAGGGGACCAAATGTTGACTTTGACCTTAGGGCTACCATGTGCTTTTGTCAGTCTGTTTCCTaGGAGCTCTGTCCTTCCGGG | + |
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Preference number: 2 (lower is better) Translates to: ASARGPNVDFDLRATMCFCQSVS*ELCPSG Trigger: CCCGGAAGGACAGAGCTCCCAGGAAACAGACTGACA...AAAGCACATGGTAGCCCTAAGGTCAAAGTCAACATTTGGTCCCCTTGCAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR CAA 90 bp | AGAGACGGTTCAGAGTTGCCTCTGCAAGGGGACCAAATGTTGACTTaGACCTTAGGGCTACCATGTGCTTTTTGGAAACAGTGCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: RDGSELPLQGDQMLT*TLGLPCAFWKQCRE Trigger: CTCCCTGCACTGTTTCCAAAAAGCACATGGTAGCCCTAAGGTCAAAGTCAACATTTGGTCCCCTTGCAGAGGCAACTCTGAACCGTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR-3UTR TCA 90 bp | TTACACACCATGTGCAAACTAGAGTGCACCATAGCTCCCTGTTTTAAATATCAGTGGCCAAAGAAGCAGTaGCCTCCTGTGGCCAGCGCG | + |
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Preference number: 2 (lower is better) Translates to: LHTMCKLECTIAPCFKYQWPKKQ*PPVASA Trigger: CGCGCTGGCCACAGGAGGTCACTGCTTCTTTGGCCA...CTGATATTTAAAACAGGGAGCTATGGTGCACTCTAGTTTGCACATGGTGTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTTCCGGGAGGTTAATTGTGCATCTTTTCAAACAAGTTGCTGCGTTTATATCAGTCGGAGTCAGCTGTaGCCTGTGCCCACTGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LFREVNCASFQTSCCVYISRSQL*PVPTAG Trigger: TCCTGCAGTGGGCACAGGGCACAGCTGACTCCGACT...GATATAAACGCAGCAACTTGTTTGAAAAGATGCACAATTAACCTCCCGGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAAAGGCAAGTAGCAACTCTTCCGGGAGGTTAATTGTGCATCTTTTCAAAGATCCAGAGTCACTGTaGGAGGCCAGGGGTCAACTC | + |
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Preference number: 2 (lower is better) Translates to: LEKASSNSSGRLIVHLFKDPESL*EARGQL Trigger: GAGTTGACCCCTGGCCTCCCACAGTGACTCTGGATC...TTTGAAAAGATGCACAATTAACCTCCCGGAAGAGTTGCTACTTGCCTTTTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR-3UTR CCA 90 bp | GCCAAACAGACCGTCGGCTTCTACCCTCAAAGCATGTATTTACCGTATTCACCCGATGACAAATCATGCTaGAGTAGGTGTGCTCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: AKQTVGFYPQSMYLPYSPDDKSC*SRCALA Trigger: AGCAAGAGCACACCTACTCCAGCATGATTTGTCATC...GGGTGAATACGGTAAATACATGCTTTGAGGGTAGAAGCCGACGGTCTGTTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR-3UTR GCA 90 bp | TTACACACCATGTGCAAACTAGAGTGCACCATAGCTCCCTGTTTTAAATATCAGCAGAAGGGACTGTTCTaGAGAGTGGCCTCTGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: LHTMCKLECTIAPCFKYQQKGLF*RVASEV Trigger: GACTTCAGAGGCCACTCTGCAGAACAGTCCCTTCTG...CTGATATTTAAAACAGGGAGCTATGGTGCACTCTAGTTTGCACATGGTGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR CAA 90 bp | AGGGGACCAAATGTTGACTTTGACCTTAGGGCTACCATGTGCTTTTaGGAAACAGTGCAGGGAGATATCAGAATATTGGCCAAAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: RGPNVDFDLRATMCF*ETVQGDIRILAKEA Trigger: TGCTTCTTTGGCCAATATTCTGATATCTCCCTGCACTGTTTCCAAAAAGCACATGGTAGCCCTAAGGTCAAAGTCAACATTTGGTCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR-3UTR GCA 90 bp | AATTCTCAAAAGAAGCGTGATGTGGAGCTTAAAGCCAGGGTGTCATTCCACAATCTTAGGGCTACCATGTaGTTTTTGGAAACAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: NSQKKRDVELKARVSFHNLRATM*FLETVQ Trigger: CTGCACTGTTTCCAAAAAGCACATGGTAGCCCTAAG...ATTGTGGAATGACACCCTGGCTTTAAGCTCCACATCACGCTTCTTTTGAGAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR CAA 90 bp | AGGTTTGAAAGTTCCGGACTTATCGTGACCCCTCGAAGGTCTGTCTaGATTAGTGTAAATTCGGACTCTGCTTATCCATTGACTATAAGT | + |
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Preference number: 2 (lower is better) Translates to: RFESSGLIVTPRRSV*ISVNSDSAYPLTIS Trigger: ACTTATAGTCAATGGATAAGCAGAGTCCGAATTTACACTAATCAAGACAGACCTTCGAGGGGTCACGATAAGTCCGGAACTTTCAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR-3UTR GCA 90 bp | AATTCTCAAAAGAAGCGTGATGTGGAGCTTAAAGCCAGGGTGTCATTCCACAATTTAGATGACAAATCATaGTGGAGTAGGTGTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: NSQKKRDVELKARVSFHNLDDKS*WSRCAL Trigger: AAGAGCACACCTACTCCAGCATGATTTGTCATCTAA...ATTGTGGAATGACACCCTGGCTTTAAGCTCCACATCACGCTTCTTTTGAGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCAAAGCATGTATTTACCGTATTCACCCTCGGTATTAGAAAATAAAAGTGCAAAGCATTTATTTGCCTaGCCTCCAACAGTCAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: PQSMYLPYSPSVLENKSAKHLFA*PPTVRD Trigger: GTCTCTGACTGTTGGAGGGCAGGCAAATAAATGCTT...TGCACTTTTATTTTCTAATACCGAGGGTGAATACGGTAAATACATGCTTTGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGAAAAGGCAAGTAGCAACTCTTCCGGGAGGTTAATTGTGCATCTTTTCAAATATTTCAGCTTCCTTTaGTATAACTCTTGCACCTCA | + |
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Preference number: 2 (lower is better) Translates to: LEKASSNSSGRLIVHLFKYFSFL*YNSCTS Trigger: TGAGGTGCAAGAGTTATATCAAAGGAAGCTGAAATA...TTTGAAAAGATGCACAATTAACCTCCCGGAAGAGTTGCTACTTGCCTTTTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCAAAGCATGTATTTACCGTATTCACCCTCGGTATTAGAAAATAAAAGTGCATGTAAATTCGGACTCTaGTTATCCATTGACTATAAG | + |
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Preference number: 2 (lower is better) Translates to: PQSMYLPYSPSVLENKSACKFGL*LSIDYK Trigger: CTTATAGTCAATGGATAAGCAGAGTCCGAATTTACA...TGCACTTTTATTTTCTAATACCGAGGGTGAATACGGTAAATACATGCTTTGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR CCA 72 bp | AGGAGCAACCACGCTGAGATGGGGGTGAGCATGCGCTaGGTGAAATGTGGAGCTCACTGCAGGTGGGAACCC | + |
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Preference number: 3 (lower is better) Translates to: RSNHAEMGVSMR*VKCGAHCRWEP Trigger: GGGTTCCCACCTGCAGTGAGCTCCACATTTCACCCAGCGCATGCTCACCCCCATCTCAGCGTGGTTGCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR-3UTR CAA 90 bp | GTGGGAGGCCAGGGGTCAACTCACCCAGTCAGACGTATGTACACCACCAGTCTGCAAGGGGACCAAATGTaGACTTTGACCTTAGGGCTA | + |
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Preference number: 3 (lower is better) Translates to: VGGQGSTHPVRRMYTTSLQGDQM*TLTLGL Trigger: TAGCCCTAAGGTCAAAGTCAACATTTGGTCCCCTTG...CAGACTGGTGGTGTACATACGTCTGACTGGGTGAGTTGACCCCTGGCCTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR CCA 72 bp | TATCAGAATATTGGCCAAAGAAGCAGTGACCTCCTGTaGCCAGCGCGCCTCTGCTGTGGCAGATTTCCATGT | + |
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Preference number: 3 (lower is better) Translates to: YQNIGQRSSDLL*PARLCCGRFPC Trigger: ACATGGAAATCTGCCACAGCAGAGGCGCGCTGGCCACAGGAGGTCACTGCTTCTTTGGCCAATATTCTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR TCA 72 bp | CAACTCACCCAGTCAGACGTATGTACACCACCAGTCTaGATCTTCAGAATCCTACCCCTCGTCTTGGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: QLTQSDVCTPPV*IFRILPLVLAL Trigger: CAAGGCCAAGACGAGGGGTAGGATTCTGAAGATTCAGACTGGTGGTGTACATACGTCTGACTGGGTGAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR TCA 72 bp | TGTTCACCAGAAGGGACTGTTCTGCAGAGTGGCCTCTaGAGTCATTCATTGTGGCGTCTTCCTTCCCTAGAC | + |
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Preference number: 3 (lower is better) Translates to: CSPEGTVLQSGL*SHSLWRLPSLD Trigger: GTCTAGGGAAGGAAGACGCCACAATGAATGACTTCAGAGGCCACTCTGCAGAACAGTCCCTTCTGGTGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR GCA 72 bp | CCTCCTCCCCCTCGTCAGCATGTGTTTCATATGTTCTaGCCTCCCATCTTTGCCATAGGTTCTCAGGGAAAT | + |
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Preference number: 3 (lower is better) Translates to: PPPPRQHVFHMF*PPIFAIGSQGN Trigger: ATTTCCCTGAGAACCTATGGCAAAGATGGGAGGGCAGAACATATGAAACACATGCTGACGAGGGGGAGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR GCA 72 bp | GTTTCTTTGACCTATGTTCACCAGAAGGGACTGTTCTaGAGAGTGGCCTCTGAAGTCATTCATTGTGGCGTC | + |
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Preference number: 3 (lower is better) Translates to: VSLTYVHQKGLF*RVASEVIHCGV Trigger: GACGCCACAATGAATGACTTCAGAGGCCACTCTGCAGAACAGTCCCTTCTGGTGAACATAGGTCAAAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR GCA 72 bp | TCACTGCAGGTGGGAACCCCGAGTTTACACACCATGTaGAAACTAGAGTGCACCATAGCTCCCTGTTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: SLQVGTPSLHTM*KLECTIAPCFK Trigger: TTTAAAACAGGGAGCTATGGTGCACTCTAGTTTGCACATGGTGTGTAAACTCGGGGTTCCCACCTGCAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR GCA 72 bp | GATACTGATGCAGACAGTGATGTGATGCCATTCACGTaGGTTTCTTTGACCTATGTTCACCAGAAGGGACTG | + |
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Preference number: 3 (lower is better) Translates to: DTDADSDVMPFT*VSLTYVHQKGL Trigger: CAGTCCCTTCTGGTGAACATAGGTCAAAGAAACGCACGTGAATGGCATCACATCACTGTCTGCATCAGTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR-3UTR CAA 90 bp | CTCTTCCGGGAGGTTAATTGTGCATCTTTTCAAACAAGTTGCTGCGTTTATATCGTGATGGCTGTCGTATaGGAAGTCGGAGTCAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: LFREVNCASFQTSCCVYIVMAVV*EVGVSC Trigger: ACAGCTGACTCCGACTTCCAATACGACAGCCATCAC...GATATAAACGCAGCAACTTGTTTGAAAAGATGCACAATTAACCTCCCGGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR TCA 72 bp | TATGTTCAGATAGTACAATTCATACGAAGCAAGGTTTaGAAGTTCCGGACTTATCGTGACCCCTCGAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: YVQIVQFIRSKV*KFRTYRDPSKV Trigger: GACCTTCGAGGGGTCACGATAAGTCCGGAACTTTCAAACCTTGCTTCGTATGAATTGTACTATCTGAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR TCA 72 bp | CAGTATCTTACAGTGTTCCAGACCATTCATCCGCTGTaGAAGAACATCTTATCTACCCAGAGTGATGAGTAC | + |
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Preference number: 3 (lower is better) Translates to: QYLTVFQTIHPL*KNILSTQSDEY Trigger: GTACTCATCACTCTGGGTAGATAAGATGTTCTTTCACAGCGGATGAATGGTCTGGAACACTGTAAGATACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR GCA 72 bp | CTACTGATACAACTACATTGGTTAAACAGAAAACACTaGGCTAGTGATGGCTGTCGTATTGGAAGTCGGAGT | + |
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Preference number: 3 (lower is better) Translates to: LLIQLHWLNRKH*ASDGCRIGSRS Trigger: ACTCCGACTTCCAATACGACAGCCATCACTAGCGCAGTGTTTTCTGTTTAACCAATGTAGTTGTATCAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR-3UTR CAA 90 bp | CTTGAAAAGGCAAGTAGCAACTCTTCCGGGAGGTTAATTGTGCATCTTTTCAAAGACCAAATGTTGACTTaGACCTTAGGGCTACCATGT | + |
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Preference number: 3 (lower is better) Translates to: LEKASSNSSGRLIVHLFKDQMLT*TLGLPC Trigger: ACATGGTAGCCCTAAGGTCAAAGTCAACATTTGGTC...TTTGAAAAGATGCACAATTAACCTCCCGGAAGAGTTGCTACTTGCCTTTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR GCA 72 bp | GGAACCCCGAGTTTACACACCATGTGCAAACTAGAGTaGACCATAGCTCCCTGTTTTAAATATCAGATAAAA | + |
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Preference number: 3 (lower is better) Translates to: GTPSLHTMCKLE*TIAPCFKYQIK Trigger: TTTTATCTGATATTTAAAACAGGGAGCTATGGTGCACTCTAGTTTGCACATGGTGTGTAAACTCGGGGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR GCA 90 bp | CCATGTGTCAGTCTGTTTCCTGGGAGCTCTGTCCTTCCGGGGACCCATCTCTGCTCTCCAGACTGTCGCTaGACACCGAGGGGGTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PCVSLFPGSSVLPGTHLCSPDCR*TPRGSG Trigger: TCCAGACCCCCTCGGTGTGCAGCGACAGTCTGGAGA...GCAGAGATGGGTCCCCGGAAGGACAGAGCTCCCAGGAAACAGACTGACACATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CCA 90 bp | CTGTGGCAGATTTCCATGTGTCAGTCTGTTTCCTGGGAGCTCTGTCCTTCCGGGGAAGCCACTCCAGAGTaGAGGAGGGAGAGTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LWQISMCQSVSWELCPSGEATPE*RRESGL Trigger: CAGCCCACTCTCCCTCCTCCACTCTGGAGTGGCTTC...CCCGGAAGGACAGAGCTCCCAGGAAACAGACTGACACATGGAAATCTGCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CCA 90 bp | GCCAAACAGACCGTCGGCTTCTACCCTCAAAGCATGTATTTACCGTATTCACCCGGAGGGAGAGTGGGCTaGGCGCGCTGCCAGAATCCT | + |
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Preference number: 4 (lower is better) Translates to: AKQTVGFYPQSMYLPYSPGGRVG*ARCQNP Trigger: AGGATTCTGGCAGCGCGCCCAGCCCACTCTCCCTCC...GGGTGAATACGGTAAATACATGCTTTGAGGGTAGAAGCCGACGGTCTGTTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR GCA 90 bp | GCCTCTGCAAGGGGACCAAATGTTGACTTTGACCTTAGGGCTACCATGTGCTTTGGCAGTCTGGCCACGTaGAGGGAAAGGGCCGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: ASARGPNVDFDLRATMCFGSLAT*RERAVH Trigger: GTGAACGGCCCTTTCCCTGCACGTGGCCAGACTGCC...AAAGCACATGGTAGCCCTAAGGTCAAAGTCAACATTTGGTCCCCTTGCAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CCA 90 bp | GCCAAACAGACCGTCGGCTTCTACCCTCAAAGCATGTATTTACCGTATTCACCCCGGCGCGGTTGGAGATaGAAACCAGACACTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: AKQTVGFYPQSMYLPYSPRRGWR*KPDTGQ Trigger: CTGCCCAGTGTCTGGTTTCCATCTCCAACCGCGCCG...GGGTGAATACGGTAAATACATGCTTTGAGGGTAGAAGCCGACGGTCTGTTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CCA 90 bp | GCCTCTGCAAGGGGACCAAATGTTGACTTTGACCTTAGGGCTACCATGTGCTTTGGTCACCGTGTTCCTTaGTCACCTCGCGCTCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ASARGPNVDFDLRATMCFGHRVP*SPRAQV Trigger: TACCTGAGCGCGAGGTGACCAAGGAACACGGTGACC...AAAGCACATGGTAGCCCTAAGGTCAAAGTCAACATTTGGTCCCCTTGCAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CCA 90 bp | GCCAAACAGACCGTCGGCTTCTACCCTCAAAGCATGTATTTACCGTATTCACCCTCGACCCAGATTCGGTaGTCACGTCGCTGTCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: AKQTVGFYPQSMYLPYSPSTQIR*SRRCRI Trigger: GATCCGACAGCGACGTGACCACCGAATCTGGGTCGA...GGGTGAATACGGTAAATACATGCTTTGAGGGTAGAAGCCGACGGTCTGTTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR GCA 90 bp | GTTAATGTGATTCAAGAGAGTGGTTCTGCTAAACAAACTGAAGCACACCGGTCGGTGGGCTGGGCGCGCTaGCAGAATCCTGTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VNVIQESGSAKQTEAHRSVGWAR*QNPVSP Trigger: AGGAGAGACAGGATTCTGGCAGCGCGCCCAGCCCAC...CGACCGGTGTGCTTCAGTTTGTTTAGCAGAACCACTCTCTTGAATCACATTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CCA 90 bp | GCCAAACAGACCGTCGGCTTCTACCCTCAAAGCATGTATTTACCGTATTCACCCCACACCGAGGGGGTCTaGATGGGTCGGTATTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AKQTVGFYPQSMYLPYSPHTEGV*MGRYLL Trigger: CAACAAATACCGACCCATCCAGACCCCCTCGGTGTG...GGGTGAATACGGTAAATACATGCTTTGAGGGTAGAAGCCGACGGTCTGTTTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CCA 90 bp | CTGTGGCAGATTTCCATGTGTCAGTCTGTTTCCTGGGAGCTCTGTCCTTCCGGGTCTCTTCTCACACAGTaGGCAACGGAACTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWQISMCQSVSWELCPSGSLLTQ*ATELLF Trigger: GAAAAGCAGTTCCGTTGCCCACTGTGTGAGAAGAGA...CCCGGAAGGACAGAGCTCCCAGGAAACAGACTGACACATGGAAATCTGCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR TCA 90 bp | GCCTCTGCAAGGGGACCAAATGTTGACTTTGACCTTAGGGCTACCATGTGCTTTTGGGTCGGTATTTGTTaGGGTCCAACAAGCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASARGPNVDFDLRATMCFWVGIC*GPTSSW Trigger: CCAAGAGCTTGTTGGACCTCAACAAATACCGACCCA...AAAGCACATGGTAGCCCTAAGGTCAAAGTCAACATTTGGTCCCCTTGCAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CCA 90 bp | CCTCAAAGCATGTATTTACCGTATTCACCCTCGGTATTAGAAAATAAAAGTGCAGTGGAGGAGGGAGAGTaGGCTGGGCGCGCTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PQSMYLPYSPSVLENKSAVEEGE*AGRAAR Trigger: TCTGGCAGCGCGCCCAGCCCACTCTCCCTCCTCCAC...TGCACTTTTATTTTCTAATACCGAGGGTGAATACGGTAAATACATGCTTTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR CAA 72 bp | TGCTTTTTGGAAACAGTGCAGGGAGATATCAGAATATaGGCCAAAGAAGCAGTGACCTCCTGTGGCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: CFLETVQGDIRI*AKEAVTSCGQR Trigger: GCGCTGGCCACAGGAGGTCACTGCTTCTTTGGCCAATATTCTGATATCTCCCTGCACTGTTTCCAAAAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR TCA 90 bp | GCCAAACAGACCGTCGGCTTCTACCCTCAAAGCATGTATTTACCGTATTCACCCGATGGTCACTCCTCATaGATCTCTTCTCACACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AKQTVGFYPQSMYLPYSPDGHSS*ISSHTV Trigger: CACTGTGTGAGAAGAGATTCATGAGGAGTGACCATC...GGGTGAATACGGTAAATACATGCTTTGAGGGTAGAAGCCGACGGTCTGTTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CCA 90 bp | CTTGAAAAGGCAAGTAGCAACTCTTCCGGGAGGTTAATTGTGCATCTTTTCAAAGCACGGCGGCGCGGTTaGAGATGGAAACCAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: LEKASSNSSGRLIVHLFKARRRG*RWKPDT Trigger: AGTGTCTGGTTTCCATCTCCAACCGCGCCGCCGTGC...TTTGAAAAGATGCACAATTAACCTCCCGGAAGAGTTGCTACTTGCCTTTTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CCA 90 bp | TTACACACCATGTGCAAACTAGAGTGCACCATAGCTCCCTGTTTTAAATATCAGCTCTCCTCCGGGCTGTaGGAAGGACTCGACCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LHTMCKLECTIAPCFKYQLSSGL*EGLDPD Trigger: ATCTGGGTCGAGTCCTTCCCACAGCCCGGAGGAGAG...CTGATATTTAAAACAGGGAGCTATGGTGCACTCTAGTTTGCACATGGTGTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR CAA 72 bp | GCAGACAGTGATGTGATGCCATTCACGTGCGTTTCTTaGACCTATGTTCACCAGAAGGGACTGTTCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ADSDVMPFTCVS*TYVHQKGLFCR Trigger: TCTGCAGAACAGTCCCTTCTGGTGAACATAGGTCAAAGAAACGCACGTGAATGGCATCACATCACTGTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR TCA 90 bp | CCTCAAAGCATGTATTTACCGTATTCACCCTCGGTATTAGAAAATAAAAGTGCAGGATGGAACTCGGTGTaGCGCCGGGCATGCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PQSMYLPYSPSVLENKSAGWNSV*RRACLV Trigger: CACCAAGCATGCCCGGCGTCACACCGAGTTCCATCC...TGCACTTTTATTTTCTAATACCGAGGGTGAATACGGTAAATACATGCTTTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR GCA 90 bp | AATTCTCAAAAGAAGCGTGATGTGGAGCTTAAAGCCAGGGTGTCATTCCACAATAGTGGGCAACGGAACTaGTTTTCCCCAGTGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NSQKKRDVELKARVSFHNSGQRN*FSPVWV Trigger: GACCCACACTGGGGAAAAGCAGTTCCGTTGCCCACT...ATTGTGGAATGACACCCTGGCTTTAAGCTCCACATCACGCTTCTTTTGAGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR CAA 72 bp | TCAGAGTTGCCTCTGCAAGGGGACCAAATGTTGACTTaGACCTTAGGGCTACCATGTGCTTTTTGGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SELPLQGDQMLT*TLGLPCAFWKQ Trigger: CTGTTTCCAAAAAGCACATGGTAGCCCTAAGGTCAAAGTCAACATTTGGTCCCCTTGCAGAGGCAACTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CCA 90 bp | TTACACACCATGTGCAAACTAGAGTGCACCATAGCTCCCTGTTTTAAATATCAGATGGAAACCAGACACTaGGCAGCCACGAAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LHTMCKLECTIAPCFKYQMETRH*AATKSM Trigger: CATGGACTTCGTGGCTGCCCAGTGTCTGGTTTCCAT...CTGATATTTAAAACAGGGAGCTATGGTGCACTCTAGTTTGCACATGGTGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CCA 90 bp | TTACACACCATGTGCAAACTAGAGTGCACCATAGCTCCCTGTTTTAAATATCAGCTTTTTAAGGCAGTCTaGCCACGTGCAGGGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHTMCKLECTIAPCFKYQLFKAV*PRAGKG Trigger: CCCTTTCCCTGCACGTGGCCAGACTGCCTTAAAAAG...CTGATATTTAAAACAGGGAGCTATGGTGCACTCTAGTTTGCACATGGTGTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| 3UTR CAA 72 bp | AGTTCCGGACTTATCGTGACCCCTCGAAGGTCTGTCTaGATTAGTGTAAATTCGGACTCTGCTTATCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGLIVTPRRSV*ISVNSDSAYPL Trigger: CAATGGATAAGCAGAGTCCGAATTTACACTAATCAAGACAGACCTTCGAGGGGTCACGATAAGTCCGGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CCA 90 bp | CTTCCGGAGCGCCCCCGTGCTCCGGCACGGCGGCGCGGTTGGAGATaGAAACCAGACACTGGGCAGCCACGAAGTCCATGTAGGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LPERPRAPARRRGWR*KPDTGQPRSPCRRP Trigger: CGGCCGCCTACATGGACTTCGTGGCTGCCCAGTGTCTGGTTTCCATCTCCAACCGCGCCGCCGTGCCGGAGCACGGGGGCGCTCCGGAAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CCA 90 bp | GCTCGGCTTCCGGAGCGCCCCCGTGCTCCGGCACGGCGGCGCGGTTaGAGATGGAAACCAGACACTGGGCAGCCACGAAGTCCATGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ARLPERPRAPARRRG*RWKPDTGQPRSPCR Trigger: CCTACATGGACTTCGTGGCTGCCCAGTGTCTGGTTTCCATCTCCAACCGCGCCGCCGTGCCGGAGCACGGGGGCGCTCCGGAAGCCGAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CCA 90 bp | GCGTGCAATAATCCTTCCAGGTGTCCCCCGGGTCACCGTGTTCCTTaGTCACCTCGCGCTCAGGTAGTCGCAGCCGCTCGGCTTCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ACNNPSRCPPGHRVP*SPRAQVVAAARLPE Trigger: CTCCGGAAGCCGAGCGGCTGCGACTACCTGAGCGCGAGGTGACCAAGGAACACGGTGACCCGGGGGACACCTGGAAGGATTATTGCACGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CCA 90 bp | GTTTCCCCTTCGAAGCCACTCCAGAGTGGAGGAGGGAGAGTGGGCTaGGCGCGCTGCCAGAATCCTGTCTCTCCTCCGGGCTGTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSPSKPLQSGGGRVG*ARCQNPVSPPGCGK Trigger: CTTCCCACAGCCCGGAGGAGAGACAGGATTCTGGCAGCGCGCCCAGCCCACTCTCCCTCCTCCACTCTGGAGTGGCTTCGAAGGGGAAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CCA 90 bp | CCTGTCTCTCCTCCGGGCTGTGGGAAGGACTCGACCCAGATTCGGTaGTCACGTCGCTGTCGGATCCTATATCCTCATCGGGACTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PVSPPGCGKDSTQIR*SRRCRILYPHRDSP Trigger: TGGAGAGTCCCGATGAGGATATAGGATCCGACAGCGACGTGACCACCGAATCTGGGTCGAGTCCTTCCCACAGCCCGGAGGAGAGACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CCA 90 bp | TCCTCATCGGGACTCTCCAGACTGTCGCTGCACACCGAGGGGGTCTaGATGGGTCGGTATTTGTTGAGGTCCAACAAGCTCTTGGCGATA | + |
|
Preference number: 5 (lower is better) Translates to: SSSGLSRLSLHTEGV*MGRYLLRSNKLLAI Trigger: TATCGCCAAGAGCTTGTTGGACCTCAACAAATACCGACCCATCCAGACCCCCTCGGTGTGCAGCGACAGTCTGGAGAGTCCCGATGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CAA 90 bp | GCCTCTGCAAGGGGACCAAATGTTGACTTTGACCTTAGGGCTACCATGTGCTTTAGGTCCAACAAGCTCTaGGCGATAGTGACCAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASARGPNVDFDLRATMCFRSNKL*AIVTSV Trigger: CACGCTGGTCACTATCGCCAAGAGCTTGTTGGACCT...AAAGCACATGGTAGCCCTAAGGTCAAAGTCAACATTTGGTCCCCTTGCAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CAA 90 bp | AATTCTCAAAAGAAGCGTGATGTGGAGCTTAAAGCCAGGGTGTCATTCCACAATGGGTCACCGTGTTCCTaGGTCACCTCGCGCTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NSQKKRDVELKARVSFHNGSPCS*VTSRSG Trigger: ACCTGAGCGCGAGGTGACCAAGGAACACGGTGACCC...ATTGTGGAATGACACCCTGGCTTTAAGCTCCACATCACGCTTCTTTTGAGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CAA 90 bp | GCCAAACAGACCGTCGGCTTCTACCCTCAAAGCATGTATTTACCGTATTCACCCTGGATGGGTCGGTATTaGTTGAGGTCCAACAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AKQTVGFYPQSMYLPYSPWMGRY*LRSNKL Trigger: GAGCTTGTTGGACCTCAACAAATACCGACCCATCCA...GGGTGAATACGGTAAATACATGCTTTGAGGGTAGAAGCCGACGGTCTGTTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CAA 90 bp | CCTCAAAGCATGTATTTACCGTATTCACCCTCGGTATTAGAAAATAAAAGTGCAGGCACGGCGGCGCGGTaGGAGATGGAAACCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: PQSMYLPYSPSVLENKSAGTAAR*EMETRH Trigger: GTGTCTGGTTTCCATCTCCAACCGCGCCGCCGTGCC...TGCACTTTTATTTTCTAATACCGAGGGTGAATACGGTAAATACATGCTTTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS-3UTR CAA 90 bp | CTTGAAAAGGCAAGTAGCAACTCTTCCGGGAGGTTAATTGTGCATCTTTTCAAAATGGGTCGGTATTTGTaGAGGTCCAACAAGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LEKASSNSSGRLIVHLFKMGRYL*RSNKLL Trigger: CAAGAGCTTGTTGGACCTCAACAAATACCGACCCAT...TTTGAAAAGATGCACAATTAACCTCCCGGAAGAGTTGCTACTTGCCTTTTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CCA 72 bp | CCGGAGCGCCCCCGTGCTCCGGCACGGCGGCGCGGTTaGAGATGGAAACCAGACACTGGGCAGCCACGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PERPRAPARRRG*RWKPDTGQPRS Trigger: ACTTCGTGGCTGCCCAGTGTCTGGTTTCCATCTCCAACCGCGCCGCCGTGCCGGAGCACGGGGGCGCTCCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CAA 72 bp | TCCGGAGCGCCCCCGTGCTCCGGCACGGCGGCGCGGTaGGAGATGGAAACCAGACACTGGGCAGCCACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SGAPPCSGTAAR*EMETRHWAATK Trigger: CTTCGTGGCTGCCCAGTGTCTGGTTTCCATCTCCAACCGCGCCGCCGTGCCGGAGCACGGGGGCGCTCCGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CCA 72 bp | CGCCCCCGTGCTCCGGCACGGCGGCGCGGTTGGAGATaGAAACCAGACACTGGGCAGCCACGAAGTCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: RPRAPARRRGWR*KPDTGQPRSPC Trigger: ACATGGACTTCGTGGCTGCCCAGTGTCTGGTTTCCATCTCCAACCGCGCCGCCGTGCCGGAGCACGGGGGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CCA 72 bp | TCGAAGCCACTCCAGAGTGGAGGAGGGAGAGTGGGCTaGGCGCGCTGCCAGAATCCTGTCTCTCCTCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SKPLQSGGGRVG*ARCQNPVSPPG Trigger: GCCCGGAGGAGAGACAGGATTCTGGCAGCGCGCCCAGCCCACTCTCCCTCCTCCACTCTGGAGTGGCTTCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CCA 72 bp | AATCCTTCCAGGTGTCCCCCGGGTCACCGTGTTCCTTaGTCACCTCGCGCTCAGGTAGTCGCAGCCGCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: NPSRCPPGHRVP*SPRAQVVAAAR Trigger: CCGAGCGGCTGCGACTACCTGAGCGCGAGGTGACCAAGGAACACGGTGACCCGGGGGACACCTGGAAGGATT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CCA 72 bp | CCTCCGGGCTGTGGGAAGGACTCGACCCAGATTCGGTaGTCACGTCGCTGTCGGATCCTATATCCTCATCGG | + |
|
Preference number: 6 (lower is better) Translates to: PPGCGKDSTQIR*SRRCRILYPHR Trigger: CCGATGAGGATATAGGATCCGACAGCGACGTGACCACCGAATCTGGGTCGAGTCCTTCCCACAGCCCGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CCA 72 bp | GGACTCTCCAGACTGTCGCTGCACACCGAGGGGGTCTaGATGGGTCGGTATTTGTTGAGGTCCAACAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GLSRLSLHTEGV*MGRYLLRSNKL Trigger: GAGCTTGTTGGACCTCAACAAATACCGACCCATCCAGACCCCCTCGGTGTGCAGCGACAGTCTGGAGAGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CAA 90 bp | TCCAGACTGTCGCTGCACACCGAGGGGGTCTGGATGGGTCGGTATTaGTTGAGGTCCAACAAGCTCTTGGCGATAGTGACCAGCGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SRLSLHTEGVWMGRY*LRSNKLLAIVTSVQ Trigger: TTGCACGCTGGTCACTATCGCCAAGAGCTTGTTGGACCTCAACAAATACCGACCCATCCAGACCCCCTCGGTGTGCAGCGACAGTCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CAA 72 bp | CTGCACACCGAGGGGGTCTGGATGGGTCGGTATTTGTaGAGGTCCAACAAGCTCTTGGCGATAGTGACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LHTEGVWMGRYL*RSNKLLAIVTS Trigger: GCTGGTCACTATCGCCAAGAGCTTGTTGGACCTCAACAAATACCGACCCATCCAGACCCCCTCGGTGTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS CAA 72 bp | TCGCTGCACACCGAGGGGGTCTGGATGGGTCGGTATTaGTTGAGGTCCAACAAGCTCTTGGCGATAGTGACC | + |
|
Preference number: 6 (lower is better) Translates to: SLHTEGVWMGRY*LRSNKLLAIVT Trigger: GGTCACTATCGCCAAGAGCTTGTTGGACCTCAACAAATACCGACCCATCCAGACCCCCTCGGTGTGCAGCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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| CDS GCA 72 bp | ATCCTATATCCTCATCGGGACTCTCCAGACTGTCGCTaGACACCGAGGGGGTCTGGATGGGTCGGTATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ILYPHRDSPDCR*TPRGSGWVGIC Trigger: ACAAATACCGACCCATCCAGACCCCCTCGGTGTGCAGCGACAGTCTGGAGAGTCCCGATGAGGATATAGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036884.3 |
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