Pregenerated sensors for KLF8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041649Ensembl transcript IDs: ENSMUST00000039545.5, ENSMUST00000112574.9
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTACAGTGGAGCCCATCGAAAGTGATGTTTCAACAGGCTGCCCTCTaGACGAGGCTTGGGATTAACAGCAGTTCTAACACCTTATCCAAG | + |
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Preference number: 1 (lower is better) Translates to: VQWSPSKVMFQQAAL*TRLGINSSSNTLSK Trigger: CTTGGATAAGGTGTTAGAACTGCTGTTAATCCCAAGCCTCGTTCAGAGGGCAGCCTGTTGAAACATCACTTTCGATGGGCTCCACTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR CCA 90 bp | CCAGTCTCATTAACCTGGCTCAGTAGGCTGTTCGGACCCCAATCATaGGGGCAAGTTGTAGTCAAAGAGGCAAACGTAGTTACAACTTCA | + |
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Preference number: 1 (lower is better) Translates to: PVSLTWLSRLFGPQS*GQVVVKEANVVTTS Trigger: TGAAGTTGTAACTACGTTTGCCTCTTTGACTACAACTTGCCCCCATGATTGGGGTCCGAACAGCCTACTGAGCCAGGTTAATGAGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR GCA 90 bp | AGTAATTGTTCACAGGGTGCTCCCAGGTCTGCTCTTGCCTGTCACTaGCCACGTATTTTCCTAGAATACTTCTCCCTACTGATCTATCTT | + |
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Preference number: 1 (lower is better) Translates to: SNCSQGAPRSALACH*PRIFLEYFSLLIYL Trigger: AAGATAGATCAGTAGGGAGAAGTATTCTAGGAAAATACGTGGGCAGTGACAGGCAAGAGCAGACCTGGGAGCACCCTGTGAACAATTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR GCA 90 bp | CGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATaGCCCAGAGAATATTATGAACAGTCTGATTGGGCAACCAAATGT | + |
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Preference number: 1 (lower is better) Translates to: RRGRYEVQGQEQKVL*PREYYEQSDWATKC Trigger: ACATTTGGTTGCCCAATCAGACTGTTCATAATATTCTCTGGGGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR TCA 90 bp | TTATGTAAACAAAAGAATCAACAGTACAGTGGAGCCCATCGAAAGTaGTGTTTCAACAGGCTGCCCTCTGAACGAGGCTTGGGATTAACA | + |
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Preference number: 1 (lower is better) Translates to: LCKQKNQQYSGAHRK*CFNRLPSERGLGLT Trigger: TGTTAATCCCAAGCCTCGTTCAGAGGGCAGCCTGTTGAAACATCACTTTCGATGGGCTCCACTGTACTGTTGATTCTTTTGTTTACATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR GCA 90 bp | GGTTTCCTTTATATCCCACTATGTAGCAAACGTATGTGCTTTTGGTaGAGTAATTCTGCACTGTACTGTTTGAGTTCATTTACTCTGCGA | + |
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Preference number: 1 (lower is better) Translates to: GFLYIPLCSKRMCFW*SNSALYCLSSFTLR Trigger: TCGCAGAGTAAATGAACTCAAACAGTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGATATAAAGGAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR TCA 90 bp | GCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACTGTTTaGGTTCATTTACTCTGCGAAGTTCTCTTAATCATGACACATTTG | + |
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Preference number: 1 (lower is better) Translates to: ANVCAFGAVILHCTV*VHLLCEVLLIMTHL Trigger: CAAATGTGTCATGATTAAGAGAACTTCGCAGAGTAAATGAACTCAAACAGTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR GCA 90 bp | AAGTGGAATGGTTTCCTTTATATCCCACTATGTAGCAAACGTATGTaGTTTTGGTGCAGTAATTCTGCACTGTACTGTTTGAGTTCATTT | + |
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Preference number: 1 (lower is better) Translates to: KWNGFLYIPLCSKRM*FWCSNSALYCLSSF Trigger: AAATGAACTCAAACAGTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGATATAAAGGAAACCATTCCACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR CCA 90 bp | AATGGTTTCCTTTATATCCCACTATGTAGCAAACGTATGTGCTTTTaGTGCAGTAATTCTGCACTGTACTGTTTGAGTTCATTTACTCTG | + |
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Preference number: 1 (lower is better) Translates to: NGFLYIPLCSKRMCF*CSNSALYCLSSFTL Trigger: CAGAGTAAATGAACTCAAACAGTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGATATAAAGGAAACCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR GCA 90 bp | GCAACCCCTCACCTCTCTATAACGTGCTCAGTGTGCAATTTCTCATCAGGTAATCACTCAGGAGGCCATTaGAGCGTGCCTGCTGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: ATPHLSITCSVCNFSSGNHSGGH*SVPAVA Trigger: GGCCACAGCAGGCACGCTGCAATGGCCTCCTGAGTG...ATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR GCA 90 bp | GCAACCCCTCACCTCTCTATAACGTGCTCAGTGTGCAATTTCTCATCAGGTAATGAGGCCATTGCAGCGTaGCTGCTGTGGCCTGTGATA | + |
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Preference number: 2 (lower is better) Translates to: ATPHLSITCSVCNFSSGNEAIAA*LLWPVI Trigger: TATCACAGGCCACAGCAGGCACGCTGCAATGGCCTC...ATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR CCA 90 bp | TGCCACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCCCAGTCTCATTAACCTaGCTCAGTAGGCTGTTCGGA | + |
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Preference number: 2 (lower is better) Translates to: CHEEVDMRSRARNRRFYAPVSLT*LSRLFG Trigger: TCCGAACAGCCTACTGAGCCAGGTTAATGAGACTGG...GGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR GCA 90 bp | GCAACCCCTCACCTCTCTATAACGTGCTCAGTGTGCAATTTCTCATCAGGTAATTCCCAGGTCTGCTCTTaGCTGTCACTGCCCACGTAT | + |
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Preference number: 2 (lower is better) Translates to: ATPHLSITCSVCNFSSGNSQVCS*LSLPTY Trigger: ATACGTGGGCAGTGACAGGCAAGAGCAGACCTGGGA...ATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR TCA 90 bp | CACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCCCAAGAGGTTGCAAAAACTaGAGTCTGGACAGTGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: HEEVDMRSRARNRRFYAPRGCKN*SLDSEE Trigger: CTCTTCACTGTCCAGACTTCAGTTTTTGCAACCTCT...TGGGGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR TCA 90 bp | GCAACCCCTCACCTCTCTATAACGTGCTCAGTGTGCAATTTCTCATCAGGTAATGTCTATAATGTAGCATaGGGGATCAGGGAGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: ATPHLSITCSVCNFSSGNVYNVA*GIREGS Trigger: GCTGCCCTCCCTGATCCCTCATGCTACATTATAGAC...ATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGAAAAACATACTCCAAGGTCCTTGAGAACAAAGAACTCCAAGAAGCTATCACACTCAGGAGGCCATTaGAGCGTGCCTGCTGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: TEKHTPRSLRTKNSKKLSHSGGH*SVPAVA Trigger: GGCCACAGCAGGCACGCTGCAATGGCCTCCTGAGTG...TGATAGCTTCTTGGAGTTCTTTGTTCTCAAGGACCTTGGAGTATGTTTTTCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112574.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCCACCTCTCTATAACGTaGTCAGTGTGCAATTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: CHEEVDMRSRARNRRFYAHLSIT*SVCNFS Trigger: TGAGAAATTGCACACTGAGCACGTTATAGAGAGGTG...GGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR CCA 90 bp | GCAACCCCTCACCTCTCTATAACGTGCTCAGTGTGCAATTTCTCATCAGGTAATCCAGTCTCATTAACCTaGCTCAGTAGGCTGTTCGGA | + |
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Preference number: 2 (lower is better) Translates to: ATPHLSITCSVCNFSSGNPVSLT*LSRLFG Trigger: TCCGAACAGCCTACTGAGCCAGGTTAATGAGACTGG...ATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGAAAAACATACTCCAAGGTCCTTGAGAACAAAGAACTCCAAGAAGCTATCATCCCAGGTCTGCTCTTaGCTGTCACTGCCCACGTAT | + |
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Preference number: 2 (lower is better) Translates to: TEKHTPRSLRTKNSKKLSSQVCS*LSLPTY Trigger: ATACGTGGGCAGTGACAGGCAAGAGCAGACCTGGGA...TGATAGCTTCTTGGAGTTCTTTGTTCTCAAGGACCTTGGAGTATGTTTTTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112574.9 |
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| 3UTR-3UTR TCA 90 bp | ATATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTTATGTCTCAATATCCTaGAGTCTAAGGGGCACATGC | + |
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Preference number: 2 (lower is better) Translates to: ISHYVANVCAFGAVILHCYVSIS*SLRGTC Trigger: GCATGTGCCCCTTAGACTTCAGGATATTGAGACATA...ACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR GCA 90 bp | ATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACATAACGTGCTCAGTGTaGAATTTCTCATCAGGTAAT | + |
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Preference number: 2 (lower is better) Translates to: IPLCSKRMCFWCSNSALYITCSV*NFSSGN Trigger: ATTACCTGATGAGAAATTGCACACTGAGCACGTTAT...GTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR CCA 90 bp | ATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACGTAGGCCTTAACTTATaGAGAATTTATGCTCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: IPLCSKRMCFWCSNSALYVGLNL*RIYALQ Trigger: TTGCAGAGCATAAATTCTCCATAAGTTAAGGCCTAC...GTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR CCA 90 bp | ATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACAGAGCAAAGAGAATATaGTTAGAATTGGTTCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: IPLCSKRMCFWCSNSALYRAKRI*LELVLG Trigger: GCCAAGAACCAATTCTAACCATATTCTCTTTGCTCT...GTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR TCA 90 bp | TTACACTTAGTTAAACCTCAGATGTTAACCAAGAGAAGTGGAATGGTTTCCTTTTATGTCTCAATATCCTaGAGTCTAAGGGGCACATGC | + |
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Preference number: 2 (lower is better) Translates to: LHLVKPQMLTKRSGMVSFYVSIS*SLRGTC Trigger: GCATGTGCCCCTTAGACTTCAGGATATTGAGACATA...AAAGGAAACCATTCCACTTCTCTTGGTTAACATCTGAGGTTTAACTAAGTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR CCA 90 bp | ATATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTGCCAATTCCAATCTCTaGAAAACAAATTTAGGATCC | + |
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Preference number: 2 (lower is better) Translates to: ISHYVANVCAFGAVILHCANSNL*KTNLGS Trigger: GGATCCTAAATTTGTTTTCCAGAGATTGGAATTGGC...ACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR CCA 90 bp | ATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACGACTATGCTTGTAACTaGAAAGATTTTTGCCATTTG | + |
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Preference number: 2 (lower is better) Translates to: IPLCSKRMCFWCSNSALYDYACN*KDFCHL Trigger: CAAATGGCAAAAATCTTTCCAGTTACAAGCATAGTC...GTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR CAA 90 bp | AGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACTGTTaGAGTTCATTTACTCTGCGAAGTTCTCTTAATCATGACACATTT | + |
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Preference number: 2 (lower is better) Translates to: SKRMCFWCSNSALYC*SSFTLRSSLNHDTF Trigger: AAATGTGTCATGATTAAGAGAACTTCGCAGAGTAAATGAACTCAAACAGTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGAAAAACATACTCCAAGGTCCTTGAGAACAAAGAACTCCAAGAAGCTATCAAGAGCAAAGAGAATATaGTTAGAATTGGTTCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: TEKHTPRSLRTKNSKKLSRAKRI*LELVLG Trigger: GCCAAGAACCAATTCTAACCATATTCTCTTTGCTCT...TGATAGCTTCTTGGAGTTCTTTGTTCTCAAGGACCTTGGAGTATGTTTTTCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112574.9 |
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| 3UTR CAA 90 bp | ACAGCCACAGGAGGTAGTAACCTAAATTGTTCAAGCCAGAACATTTaGAATATCTGCCAAGAAATAAAGGTTTCATATGAAGAAAACCTT | + |
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Preference number: 2 (lower is better) Translates to: TATGGSNLNCSSQNI*NICQEIKVSYEENL Trigger: AAGGTTTTCTTCATATGAAACCTTTATTTCTTGGCAGATATTCAAAATGTTCTGGCTTGAACAATTTAGGTTACTACCTCCTGTGGCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR TCA 90 bp | TTACACTTAGTTAAACCTCAGATGTTAACCAAGAGAAGTGGAATGGTTTCCTTTGCTCTGCAAAGACATTaGAACTTGAAACAAGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: LHLVKPQMLTKRSGMVSFALQRH*NLKQGK Trigger: TTTACCTTGTTTCAAGTTTCAATGTCTTTGCAGAGC...AAAGGAAACCATTCCACTTCTCTTGGTTAACATCTGAGGTTTAACTAAGTGTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR CCA 90 bp | TTACACTTAGTTAAACCTCAGATGTTAACCAAGAGAAGTGGAATGGTTTCCTTTGTAGGCCTTAACTTATaGAGAATTTATGCTCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: LHLVKPQMLTKRSGMVSFVGLNL*RIYALQ Trigger: TTGCAGAGCATAAATTCTCCATAAGTTAAGGCCTAC...AAAGGAAACCATTCCACTTCTCTTGGTTAACATCTGAGGTTTAACTAAGTGTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR CAA 90 bp | CACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCCCAACACTCAGGAGGCCATaGCAGCGTGCCTGCTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: HEEVDMRSRARNRRFYAPTLRRP*QRACCG Trigger: GCCACAGCAGGCACGCTGCAATGGCCTCCTGAGTGT...TGGGGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR GCA 72 bp | TCACAGGGTGCTCCCAGGTCTGCTCTTGCCTGTCACTaGCCACGTATTTTCCTAGAATACTTCTCCCTACTG | + |
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Preference number: 3 (lower is better) Translates to: SQGAPRSALACH*PRIFLEYFSLL Trigger: CAGTAGGGAGAAGTATTCTAGGAAAATACGTGGGCAGTGACAGGCAAGAGCAGACCTGGGAGCACCCTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR CAA 90 bp | CACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCCCACAACCCAGGAAGAGGTaGCAAAAACTGAAGTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: HEEVDMRSRARNRRFYAPQPRKR*QKLKSG Trigger: TCCAGACTTCAGTTTTTGCAACCTCTTCCTGGGTTG...TGGGGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR TCA 72 bp | AGCCCATCGAAAGTGATGTTTCAACAGGCTGCCCTCTaGACGAGGCTTGGGATTAACAGCAGTTCTAACACC | + |
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Preference number: 3 (lower is better) Translates to: SPSKVMFQQAAL*TRLGINSSSNT Trigger: GGTGTTAGAACTGCTGTTAATCCCAAGCCTCGTTCAGAGGGCAGCCTGTTGAAACATCACTTTCGATGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR CCA 72 bp | TTAACCTGGCTCAGTAGGCTGTTCGGACCCCAATCATaGGGGCAAGTTGTAGTCAAAGAGGCAAACGTAGTT | + |
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Preference number: 3 (lower is better) Translates to: LTWLSRLFGPQS*GQVVVKEANVV Trigger: AACTACGTTTGCCTCTTTGACTACAACTTGCCCCCATGATTGGGGTCCGAACAGCCTACTGAGCCAGGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR CAA 90 bp | TGCCACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCGGGAGACCAGCTAACTaGTTTTCCAGTCTCATTAAC | + |
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Preference number: 3 (lower is better) Translates to: CHEEVDMRSRARNRRFYAGRPAN*FSSLIN Trigger: GTTAATGAGACTGGAAAACAAGTTAGCTGGTCTCCC...GGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR CAA 90 bp | TGCCACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCCAAGGAATCCCTTCATaGCTCTTGATGAACTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: CHEEVDMRSRARNRRFYAQGIPS*LLMNFK Trigger: TTTGAAGTTCATCAAGAGCAATGAAGGGATTCCTTG...GGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR GCA 72 bp | AGTGCAACCCCTCACCTCTCTATAACGTGCTCAGTGTaGAATTTCTCATCAGGTAATACGCTGAATGGTTGC | + |
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Preference number: 3 (lower is better) Translates to: SATPHLSITCSV*NFSSGNTLNGC Trigger: GCAACCATTCAGCGTATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR CAA 90 bp | GCAACCCCTCACCTCTCTATAACGTGCTCAGTGTGCAATTTCTCATCAGGTAATGGGAGACCAGCTAACTaGTTTTCCAGTCTCATTAAC | + |
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Preference number: 3 (lower is better) Translates to: ATPHLSITCSVCNFSSGNGRPAN*FSSLIN Trigger: GTTAATGAGACTGGAAAACAAGTTAGCTGGTCTCCC...ATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGAACAGAAGGTTTTATGCCCCAGAGAATATTATGAACAGTCTGATTGGGCAACCCAGGAAGAGGTaGCAAAAACTGAAGTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: ARNRRFYAPENIMNSLIGQPRKR*QKLKSG Trigger: TCCAGACTTCAGTTTTTGCAACCTCTTCCTGGGTTG...CCCAATCAGACTGTTCATAATATTCTCTGGGGCATAAAACCTTCTGTTCCTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR GCA 72 bp | AGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATaGCCCAGAGAATATTATGAACAGTCTGATTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: RYEVQGQEQKVL*PREYYEQSDWA Trigger: TGCCCAATCAGACTGTTCATAATATTCTCTGGGGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR-3UTR CAA 90 bp | GCAACCCCTCACCTCTCTATAACGTGCTCAGTGTGCAATTTCTCATCAGGTAATATCCCTTCATTGCTCTaGATGAACTTCAAAAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: ATPHLSITCSVCNFSSGNIPSLL*MNFKRR Trigger: CCTCCTTTTGAAGTTCATCAAGAGCAATGAAGGGAT...ATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR GCA 72 bp | AATTCCTTTAGTGCAACCCCTCACCTCTCTATAACGTaGTCAGTGTGCAATTTCTCATCAGGTAATACGCTG | + |
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Preference number: 3 (lower is better) Translates to: NSFSATPHLSIT*SVCNFSSGNTL Trigger: CAGCGTATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGCACTAAAGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR CCA 72 bp | GGTGTATACAGGTCTGTAAGGCCTCAAGGAATTATCTaGAGAAAGAATCTGACCCGTATTTGCCTCATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GVYRSVRPQGII*RKNLTRICLIC Trigger: ACAGATGAGGCAAATACGGGTCAGATTCTTTCTCCAGATAATTCCTTGAGGCCTTACAGACCTGTATACACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACAACCTACATGCCACGTaGAAAAGTACAAGTAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: IPLCSKRMCFWCSNSALYNLHAT*KSTSRP Trigger: AGGCCTACTTGTACTTTTCAACGTGGCATGTAGGTT...GTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| 3UTR TCA 72 bp | AATACACCCCAACTGAAAAACATACTCCAAGGTCCTTaGGAACAAAGAACTCCAAGAAGCTATCACAACGAG | + |
|
Preference number: 3 (lower is better) Translates to: NTPQLKNILQGP*EQRTPRSYHNE Trigger: CTCGTTGTGATAGCTTCTTGGAGTTCTTTGTTCTCAAGGACCTTGGAGTATGTTTTTCAGTTGGGGTGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112574.9 |
||
| 3UTR-3UTR CAA 90 bp | TTACACTTAGTTAAACCTCAGATGTTAACCAAGAGAAGTGGAATGGTTTCCTTTTATACAGCCTGGAACTaGTACACCCAGAGTCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LHLVKPQMLTKRSGMVSFYTAWN*YTQSQD Trigger: GTCCTGACTCTGGGTGTACAAGTTCCAGGCTGTATA...AAAGGAAACCATTCCACTTCTCTTGGTTAACATCTGAGGTTTAACTAAGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACTCTGCAGAAACATACTaGAATAAAGGCTCAGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: IPLCSKRMCFWCSNSALYSAETY*NKGSEM Trigger: CATCTCTGAGCCTTTATTCAAGTATGTTTCTGCAGA...GTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| 3UTR TCA 72 bp | CGTGCTCAGTGTGCAATTTCTCATCAGGTAATACGCTaGATGGTTGCCTTATGTAAACAAAAGAATCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: RAQCAISHQVIR*MVALCKQKNQQ Trigger: CTGTTGATTCTTTTGTTTACATAAGGCAACCATTCAGCGTATTACCTGATGAGAAATTGCACACTGAGCACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| 3UTR TCA 72 bp | TGTGCTTTTGGTGCAGTAATTCTGCACTGTACTGTTTaGGTTCATTTACTCTGCGAAGTTCTCTTAATCATG | + |
|
Preference number: 3 (lower is better) Translates to: CAFGAVILHCTV*VHLLCEVLLIM Trigger: CATGATTAAGAGAACTTCGCAGAGTAAATGAACTCAAACAGTACAGTGCAGAATTACTGCACCAAAAGCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| 3UTR GCA 72 bp | ACTTTACAATGGCAATTACCAACAATTATGTTCAGCTaGCAGATGTCTACAGAGGGAGAAACTTCACTACAA | + |
|
Preference number: 3 (lower is better) Translates to: TLQWQLPTIMFS*QMSTEGETSLQ Trigger: TTGTAGTGAAGTTTCTCCCTCTGTAGACATCTGGCAGCTGAACATAATTGTTGGTAATTGCCATTGTAAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| 3UTR CCA 72 bp | CTTTATATCCCACTATGTAGCAAACGTATGTGCTTTTaGTGCAGTAATTCTGCACTGTACTGTTTGAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LYIPLCSKRMCF*CSNSALYCLSS Trigger: TGAACTCAAACAGTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGATATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| 3UTR-3UTR CAA 90 bp | TTACACTTAGTTAAACCTCAGATGTTAACCAAGAGAAGTGGAATGGTTTCCTTTTCTGCACTGTACTGTTaGAGTTCATTTACTCTGCGA | + |
|
Preference number: 3 (lower is better) Translates to: LHLVKPQMLTKRSGMVSFSALYC*SSFTLR Trigger: TCGCAGAGTAAATGAACTCAAACAGTACAGTGCAGA...AAAGGAAACCATTCCACTTCTCTTGGTTAACATCTGAGGTTTAACTAAGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| 3UTR TCA 72 bp | TACCAAAGCAGTAACAGTAAAACCTACATGCCACGTTaGAAAGTACAAGTAGGCCTTAACTTATGGAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: YQSSNSKTYMPR*KVQVGLNLWRI Trigger: AATTCTCCATAAGTTAAGGCCTACTTGTACTTTTCAACGTGGCATGTAGGTTTTACTGTTACTGCTTTGGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| 3UTR GCA 72 bp | TATATCCCACTATGTAGCAAACGTATGTGCTTTTGGTaGAGTAATTCTGCACTGTACTGTTTGAGTTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: YIPLCSKRMCFW*SNSALYCLSSF Trigger: AAATGAACTCAAACAGTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| 3UTR CCA 72 bp | TTAGGATCCAAAGTGGAACAGAAGTACATAACCCTTTaGACTCTGTTCTATAGTATTGTACCAACTACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LGSKVEQKYITL*TLFYSIVPTTQ Trigger: TTGAGTAGTTGGTACAATACTATAGAACAGAGTCCAAAGGGTTATGTACTTCTGTTCCACTTTGGATCCTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| 3UTR CCA 72 bp | TCCATCAAACCAGTTTACATTTCTTACACTTTACAATaGCAATTACCAACAATTATGTTCAGCTGCCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: SIKPVYISYTLQ*QLPTIMFSCQM Trigger: CATCTGGCAGCTGAACATAATTGTTGGTAATTGCCATTGTAAAGTGTAAGAAATGTAAACTGGTTTGATGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| 3UTR TCA 72 bp | AGTAAAACTGGATCTACAAAACCTTCACGGTTAGCATaGGACTCTGTATTTCAGACTCAATTCTATGTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SKTGSTKPSRLA*DSVFQTQFYVN Trigger: ATTTACATAGAATTGAGTCTGAAATACAGAGTCTCATGCTAACCGTGAAGGTTTTGTAGATCCAGTTTTACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| 3UTR CCA 72 bp | GTTTTATGCCCCAGAGAATATTATGAACAGTCTGATTaGGCAACCAAATGTATATTAAGCATCTTGTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: VLCPREYYEQSD*ATKCILSILLL Trigger: TAACAACAAGATGCTTAATATACATTTGGTTGCCCAATCAGACTGTTCATAATATTCTCTGGGGCATAAAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR CCA 90 bp | TGCCACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCTCTTCTCCCTGCATGTaGACCATTGTCGCTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CHEEVDMRSRARNRRFYASSPCM*TIVAGS Trigger: TGAGCCAGCGACAATGGTCCACATGCAGGGAGAAGA...GGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR TCA 90 bp | CACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCCCAGGAGCCTTCGGTTTGTaGAAGGAGAGATCAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HEEVDMRSRARNRRFYAPGAFGL*KERSTG Trigger: ACCTGTTGATCTCTCCTTTCACAAACCGAAGGCTCC...TGGGGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR TCA 90 bp | ATATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTTGGCCACCGGTCCCCTaGGACGAGGCCAGGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISHYVANVCAFGAVILHCWPPVP*DEARIE Trigger: CTCTATCCTGGCCTCGTCTCAGGGGACCGGTGGCCA...ACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR TCA 90 bp | CACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCCCATCTTATTTGGCAAACTaGCTGAGGGGATGGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HEEVDMRSRARNRRFYAPSYLAN*LRGWCG Trigger: TCCACACCATCCCCTCAGTCAGTTTGCCAAATAAGA...TGGGGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR TCA 90 bp | GCAACCCCTCACCTCTCTATAACGTGCTCAGTGTGCAATTTCTCATCAGGTAATAGGCGGGGTCAACTTTaGCCGATCCAGCACTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ATPHLSITCSVCNFSSGNRRGQL*PIQHFC Trigger: GCAAAAGTGCTGGATCGGTCAAAGTTGACCCCGCCT...ATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGGAACAGAAGGTTTTATGCCCCAGAGAATATTATGAACAGTCTGATTGGGGGACGGATTGGAGCTTaGAGCATGCTAGCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARNRRFYAPENIMNSLIGGRIGA*SMLAGW Trigger: CCAGCCTGCTAGCATGCTGCAAGCTCCAATCCGTCC...CCCAATCAGACTGTTCATAATATTCTCTGGGGCATAAAACCTTCTGTTCCTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR CCA 90 bp | CACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCCCATCAACAGGTTCCACCTaGGGCATGTTGAAATCACTC | + |
|
Preference number: 4 (lower is better) Translates to: HEEVDMRSRARNRRFYAPSTGST*GMLKSL Trigger: GAGTGATTTCAACATGCCCCAGGTGGAACCTGTTGA...TGGGGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| 3UTR CAA 72 bp | GGAGGAAAAGGAGGTCAAGGAATCCCTTCATTGCTCTaGATGAACTTCAAAAGGAGGGCTGGCACTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGKGGQGIPSLL*MNFKRRAGTAC Trigger: ACAGGCAGTGCCAGCCCTCCTTTTGAAGTTCATCAAGAGCAATGAAGGGATTCCTTGACCTCCTTTTCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTTGTAGTCAAAGAGGCAAACGTAGTTACAACTTCAGCACACACTCAGGAGCCACCTGGGGCATGTTaGAATCACTCTCCAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVVVKEANVVTTSAHTQEPPGAC*NHSPGA Trigger: AGCTCCTGGAGAGTGATTTCAACATGCCCCAGGTGG...CTCCTGAGTGTGTGCTGAAGTTGTAACTACGTTTGCCTCTTTGACTACAACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTTGTAGTCAAAGAGGCAAACGTAGTTACAACTTCAGCACACACTCAGGAGAGGCGGGGTCAACTTTaGCCGATCCAGCACTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QVVVKEANVVTTSAHTQERRGQL*PIQHFC Trigger: GCAAAAGTGCTGGATCGGTCAAAGTTGACCCCGCCT...CTCCTGAGTGTGTGCTGAAGTTGTAACTACGTTTGCCTCTTTGACTACAACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR CCA 90 bp | CACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCCCACTCATCACTATCACTTaGAAACTCCAGTGGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: HEEVDMRSRARNRRFYAPLITIT*KLQWAH Trigger: ATGTGCCCACTGGAGTTTCCAAGTGATAGTGATGAG...TGGGGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGGAACAGAAGGTTTTATGCCCCAGAGAATATTATGAACAGTCTGATTGGGGTCTGTGCACCGGAATaGCTTGATGCCCGTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ARNRRFYAPENIMNSLIGVCAPE*LDARVL Trigger: AAGCACACGGGCATCAAGCCATTCCGGTGCACAGAC...CCCAATCAGACTGTTCATAATATTCTCTGGGGCATAAAACCTTCTGTTCCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTTGTAGTCAAAGAGGCAAACGTAGTTACAACTTCAGCACACACTCAGGAGGTCTGTGCACCGGAATaGCTTGATGCCCGTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVVVKEANVVTTSAHTQEVCAPE*LDARVL Trigger: AAGCACACGGGCATCAAGCCATTCCGGTGCACAGAC...CTCCTGAGTGTGTGCTGAAGTTGTAACTACGTTTGCCTCTTTGACTACAACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR TCA 90 bp | ATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACCCACCTGGGGCATGTTaGAATCACTCTCCAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPLCSKRMCFWCSNSALYPPGAC*NHSPGA Trigger: AGCTCCTGGAGAGTGATTTCAACATGCCCCAGGTGG...GTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR TCA 90 bp | GCAACCCCTCACCTCTCTATAACGTGCTCAGTGTGCAATTTCTCATCAGGTAATGGAGCCTTCGGTTTGTaGAAGGAGAGATCAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ATPHLSITCSVCNFSSGNGAFGL*KERSTG Trigger: ACCTGTTGATCTCTCCTTTCACAAACCGAAGGCTCC...ATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR GCA 90 bp | GCAACCCCTCACCTCTCTATAACGTGCTCAGTGTGCAATTTCTCATCAGGTAATAGAGACTCTTCTCCCTaGATGTGGACCATTGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATPHLSITCSVCNFSSGNRDSSP*MWTIVA Trigger: AGCGACAATGGTCCACATGCAGGGAGAAGAGTCTCT...ATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR GCA 90 bp | GCAACCCCTCACCTCTCTATAACGTGCTCAGTGTGCAATTTCTCATCAGGTAATCAGATCGAGAAAAACTaGGGTTGCAGTCTGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ATPHLSITCSVCNFSSGNQIEKN*GCSLCT Trigger: GGTGCACAGACTGCAACCGCAGTTTTTCTCGATCTG...ATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR CCA 90 bp | ATATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTAGCATGCTAGCAGGCTaGAGCGGAGCCTTCGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISHYVANVCAFGAVILHCSMLAG*SGAFGL Trigger: CAAACCGAAGGCTCCGCTCCAGCCTGCTAGCATGCT...ACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR CCA 90 bp | GCAACCCCTCACCTCTCTATAACGTGCTCAGTGTGCAATTTCTCATCAGGTAATGTGGACCATTGTCGCTaGCTCATGATGAAATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ATPHLSITCSVCNFSSGNVDHCR*LMMKSL Trigger: CAGGGATTTCATCATGAGCCAGCGACAATGGTCCAC...ATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR GCA 90 bp | TGCCACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCAGAGCCACTTTCAATTaGACTCTCATCACTATCACT | + |
|
Preference number: 4 (lower is better) Translates to: CHEEVDMRSRARNRRFYARATFN*TLITIT Trigger: AGTGATAGTGATGAGAGTGCAATTGAAAGTGGCTCT...GGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR GCA 90 bp | CACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCCCAAGAGCCACTTTCAATTaGACTCTCATCACTATCACT | + |
|
Preference number: 4 (lower is better) Translates to: HEEVDMRSRARNRRFYAPRATFN*TLITIT Trigger: AGTGATAGTGATGAGAGTGCAATTGAAAGTGGCTCT...TGGGGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGGAACAGAAGGTTTTATGCCCCAGAGAATATTATGAACAGTCTGATTGGGAGAGACTCTTCTCCCTaGATGTGGACCATTGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARNRRFYAPENIMNSLIGRDSSP*MWTIVA Trigger: AGCGACAATGGTCCACATGCAGGGAGAAGAGTCTCT...CCCAATCAGACTGTTCATAATATTCTCTGGGGCATAAAACCTTCTGTTCCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR GCA 90 bp | CAAGTTGTAGTCAAAGAGGCAAACGTAGTTACAACTTCAGCACACACTCAGGAGCAGATCGAGAAAAACTaGGGTTGCAGTCTGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: QVVVKEANVVTTSAHTQEQIEKN*GCSLCT Trigger: GGTGCACAGACTGCAACCGCAGTTTTTCTCGATCTG...CTCCTGAGTGTGTGCTGAAGTTGTAACTACGTTTGCCTCTTTGACTACAACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR CCA 90 bp | GCAACCCCTCACCTCTCTATAACGTGCTCAGTGTGCAATTTCTCATCAGGTAATATCATTAAACAGAGCTaGGTTCTCCATTGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ATPHLSITCSVCNFSSGNIIKQS*VLHWAG Trigger: GCCAGCCCAATGGAGAACCCAGCTCTGTTTAATGAT...ATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTTGTAGTCAAAGAGGCAAACGTAGTTACAACTTCAGCACACACTCAGGAGGTGTGCTTACGGAAATaGCGAGTAAGCTCATCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVVVKEANVVTTSAHTQEVCLRK*RVSSSE Trigger: CTCGGATGAGCTTACTCGCCATTTCCGTAAGCACAC...CTCCTGAGTGTGTGCTGAAGTTGTAACTACGTTTGCCTCTTTGACTACAACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR TCA 90 bp | GCCAGGAACAGAAGGTTTTATGCCCCAGAGAATATTATGAACAGTCTGATTGGGTCTTATTTGGCAAACTaGCTGAGGGGATGGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ARNRRFYAPENIMNSLIGSYLAN*LRGWCG Trigger: TCCACACCATCCCCTCAGTCAGTTTGCCAAATAAGA...CCCAATCAGACTGTTCATAATATTCTCTGGGGCATAAAACCTTCTGTTCCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR CCA 90 bp | ATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACACCATAGGCAAAGACTaGACCACCAGTGGGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IPLCSKRMCFWCSNSALYTIGKD*TTSGIV Trigger: GACAATCCCACTGGTGGTCCAGTCTTTGCCTATGGT...GTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR CCA 90 bp | GCAACCCCTCACCTCTCTATAACGTGCTCAGTGTGCAATTTCTCATCAGGTAATCTCATCACTATCACTTaGAAACTCCAGTGGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: ATPHLSITCSVCNFSSGNLITIT*KLQWAH Trigger: ATGTGCCCACTGGAGTTTCCAAGTGATAGTGATGAG...ATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR TCA 90 bp | ATATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTATTTGGCAAACTGACTaGGGGGATGGTGTGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISHYVANVCAFGAVILHCIWQTD*GDGVDH Trigger: GTGATCCACACCATCCCCTCAGTCAGTTTGCCAAAT...ACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
||
| CDS-3UTR GCA 90 bp | ACTGAAAAACATACTCCAAGGTCCTTGAGAACAAAGAACTCCAAGAAGCTATCAGGCTTGATGCCCGTGTaGTTACGGAAATGGCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TEKHTPRSLRTKNSKKLSGLMPV*LRKWRV Trigger: TACTCGCCATTTCCGTAAGCACACGGGCATCAAGCC...TGATAGCTTCTTGGAGTTCTTTGTTCTCAAGGACCTTGGAGTATGTTTTTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112574.9 |
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| CDS-3UTR CCA 90 bp | ATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACATCATTAAACAGAGCTaGGTTCTCCATTGGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: IPLCSKRMCFWCSNSALYIIKQS*VLHWAG Trigger: GCCAGCCCAATGGAGAACCCAGCTCTGTTTAATGAT...GTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CCA 90 bp | ATATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACCATAGGCAAAGACTaGACCACCAGTGGGATTGTC | + |
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Preference number: 4 (lower is better) Translates to: ISHYVANVCAFGAVILHCTIGKD*TTSGIV Trigger: GACAATCCCACTGGTGGTCCAGTCTTTGCCTATGGT...ACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CCA 90 bp | ACTGAAAAACATACTCCAAGGTCCTTGAGAACAAAGAACTCCAAGAAGCTATCAGTGGACCATTGTCGCTaGCTCATGATGAAATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEKHTPRSLRTKNSKKLSVDHCR*LMMKSL Trigger: CAGGGATTTCATCATGAGCCAGCGACAATGGTCCAC...TGATAGCTTCTTGGAGTTCTTTGTTCTCAAGGACCTTGGAGTATGTTTTTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112574.9 |
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| CDS-3UTR CCA 90 bp | ACTGAAAAACATACTCCAAGGTCCTTGAGAACAAAGAACTCCAAGAAGCTATCAGTGTGCTTACGGAAATaGCGAGTAAGCTCATCCGAG | + |
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Preference number: 4 (lower is better) Translates to: TEKHTPRSLRTKNSKKLSVCLRK*RVSSSE Trigger: CTCGGATGAGCTTACTCGCCATTTCCGTAAGCACAC...TGATAGCTTCTTGGAGTTCTTTGTTCTCAAGGACCTTGGAGTATGTTTTTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112574.9 |
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| CDS-3UTR GCA 90 bp | TTACACTTAGTTAAACCTCAGATGTTAACCAAGAGAAGTGGAATGGTTTCCTTTGGCTTGATGCCCGTGTaGTTACGGAAATGGCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LHLVKPQMLTKRSGMVSFGLMPV*LRKWRV Trigger: TACTCGCCATTTCCGTAAGCACACGGGCATCAAGCC...AAAGGAAACCATTCCACTTCTCTTGGTTAACATCTGAGGTTTAACTAAGTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CCA 90 bp | ACTGAAAAACATACTCCAAGGTCCTTGAGAACAAAGAACTCCAAGAAGCTATCATCAACAGGTTCCACCTaGGGCATGTTGAAATCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TEKHTPRSLRTKNSKKLSSTGST*GMLKSL Trigger: GAGTGATTTCAACATGCCCCAGGTGGAACCTGTTGA...TGATAGCTTCTTGGAGTTCTTTGTTCTCAAGGACCTTGGAGTATGTTTTTCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112574.9 |
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| CDS-3UTR TCA 90 bp | TTACACTTAGTTAAACCTCAGATGTTAACCAAGAGAAGTGGAATGGTTTCCTTTATTTGGCAAACTGACTaGGGGGATGGTGTGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHLVKPQMLTKRSGMVSFIWQTD*GDGVDH Trigger: GTGATCCACACCATCCCCTCAGTCAGTTTGCCAAAT...AAAGGAAACCATTCCACTTCTCTTGGTTAACATCTGAGGTTTAACTAAGTGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| 3UTR CAA 72 bp | AAATACACCCCAACTGAAAAACATACTCCAAGGTCCTaGAGAACAAAGAACTCCAAGAAGCTATCACAACGA | + |
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Preference number: 4 (lower is better) Translates to: KYTPTEKHTPRS*RTKNSKKLSQR Trigger: TCGTTGTGATAGCTTCTTGGAGTTCTTTGTTCTCAAGGACCTTGGAGTATGTTTTTCAGTTGGGGTGTATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112574.9 |
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| 3UTR CAA 72 bp | ATGTGCTTTTGGTGCAGTAATTCTGCACTGTACTGTTaGAGTTCATTTACTCTGCGAAGTTCTCTTAATCAT | + |
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Preference number: 4 (lower is better) Translates to: MCFWCSNSALYC*SSFTLRSSLNH Trigger: ATGATTAAGAGAACTTCGCAGAGTAAATGAACTCAAACAGTACAGTGCAGAATTACTGCACCAAAAGCACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS TCA 90 bp | GGGATGGTGTGGATCACATGTAAAATCGGCTGGCCACCGGTCCCCTaGGACGAGGCCAGGATAGAGCCCGGAGTGAGAACAGTAGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: GMVWITCKIGWPPVP*DEARIEPGVRTVGM Trigger: CATTCCTACTGTTCTCACTCCGGGCTCTATCCTGGCCTCGTCTCAGGGGACCGGTGGCCAGCCGATTTTACATGTGATCCACACCATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS TCA 90 bp | CGGAGTGAGAACAGTAGGAATGGCTGCCGAAGTGACTGTGTCAGCTaGAGTAGGCACCATAATGGCTTGAGGTGCAGTCGGTGGCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: RSENSRNGCRSDCVS*SRHHNGLRCSRWLG Trigger: CCCAAGCCACCGACTGCACCTCAAGCCATTATGGTGCCTACTTCAGCTGACACAGTCACTTCGGCAGCCATTCCTACTGTTCTCACTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | TGCCACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCGTGCACCGGAATGGCTaGATGCCCGTGTGCTTACGG | + |
|
Preference number: 5 (lower is better) Translates to: CHEEVDMRSRARNRRFYAVHRNG*MPVCLR Trigger: CCGTAAGCACACGGGCATCAAGCCATTCCGGTGCAC...GGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | CACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCCCAAGGACGGATTGGAGCTaGCAGCATGCTAGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HEEVDMRSRARNRRFYAPRTDWS*QHASRL Trigger: CAGCCTGCTAGCATGCTGCAAGCTCCAATCCGTCCT...TGGGGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | GCAACCCCTCACCTCTCTATAACGTGCTCAGTGTGCAATTTCTCATCAGGTAATGGTGCAGTCGGTGGCTaGGGAGGACGGATTGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATPHLSITCSVCNFSSGNGAVGG*GGRIGA Trigger: AGCTCCAATCCGTCCTCCCAAGCCACCGACTGCACC...ATTACCTGATGAGAAATTGCACACTGAGCACGTTATAGAGAGGTGAGGGGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | TGCCACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCAGGCACCATAATGGCTaGAGGTGCAGTCGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CHEEVDMRSRARNRRFYARHHNG*RCSRWL Trigger: AAGCCACCGACTGCACCTCAAGCCATTATGGTGCCT...GGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | CACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCCCAGAGGCGGGGTCAACTTaGACCGATCCAGCACTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HEEVDMRSRARNRRFYAPEAGST*TDPALL Trigger: CAAAAGTGCTGGATCGGTCAAAGTTGACCCCGCCTC...TGGGGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | TGCCACGAAGAGGTAGATATGAGGTCCAGGGCCAGGAACAGAAGGTTTTATGCCCGAGAAAAACTGCGGTaGCAGTCTGTGCACCGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: CHEEVDMRSRARNRRFYAREKLR*QSVHRN Trigger: ATTCCGGTGCACAGACTGCAACCGCAGTTTTTCTCG...GGCATAAAACCTTCTGTTCCTGGCCCTGGACCTCATATCTACCTCTTCGTGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | ATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACGGTGCAGTCGGTGGCTaGGGAGGACGGATTGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPLCSKRMCFWCSNSALYGAVGG*GGRIGA Trigger: AGCTCCAATCCGTCCTCCCAAGCCACCGACTGCACC...GTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | ATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACGTGCACCGGAATGGCTaGATGCCCGTGTGCTTACGG | + |
|
Preference number: 5 (lower is better) Translates to: IPLCSKRMCFWCSNSALYVHRNG*MPVCLR Trigger: CCGTAAGCACACGGGCATCAAGCCATTCCGGTGCAC...GTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | GCCAGGAACAGAAGGTTTTATGCCCCAGAGAATATTATGAACAGTCTGATTGGGAGGCACCATAATGGCTaGAGGTGCAGTCGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ARNRRFYAPENIMNSLIGRHHNG*RCSRWL Trigger: AAGCCACCGACTGCACCTCAAGCCATTATGGTGCCT...CCCAATCAGACTGTTCATAATATTCTCTGGGGCATAAAACCTTCTGTTCCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | GCCAGGAACAGAAGGTTTTATGCCCCAGAGAATATTATGAACAGTCTGATTGGGGGGCCAGTGACCTGTTaGAATACCTGCATCGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: ARNRRFYAPENIMNSLIGGPVTC*NTCIEP Trigger: TGGTTCGATGCAGGTATTCAAACAGGTCACTGGCCC...CCCAATCAGACTGTTCATAATATTCTCTGGGGCATAAAACCTTCTGTTCCTGGC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | ATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACTCCACCTGGGGCATGTaGAAATCACTCTCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IPLCSKRMCFWCSNSALYSTWGM*KSLSRS Trigger: GCTCCTGGAGAGTGATTTCAACATGCCCCAGGTGGA...GTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | GCCAGGAACAGAAGGTTTTATGCCCCAGAGAATATTATGAACAGTCTGATTGGGCGAGAAAAACTGCGGTaGCAGTCTGTGCACCGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ARNRRFYAPENIMNSLIGREKLR*QSVHRN Trigger: ATTCCGGTGCACAGACTGCAACCGCAGTTTTTCTCG...CCCAATCAGACTGTTCATAATATTCTCTGGGGCATAAAACCTTCTGTTCCTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS GCA 90 bp | GAAGGATCTCTGGTCGGAACAGGGCCAGTGACCTGTTTGAATACCTaGATCGAACCACTTTCTGATTTAATTCGGACATCCATGTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EGSLVGTGPVTCLNT*IEPLSDLIRTSMLS Trigger: AGACAACATGGATGTCCGAATTAAATCAGAAAGTGGTTCGATGCAGGTATTCAAACAGGTCACTGGCCCTGTTCCGACCAGAGATCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | ACTGAAAAACATACTCCAAGGTCCTTGAGAACAAAGAACTCCAAGAAGCTATCAGGGCCAGTGACCTGTTaGAATACCTGCATCGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: TEKHTPRSLRTKNSKKLSGPVTC*NTCIEP Trigger: TGGTTCGATGCAGGTATTCAAACAGGTCACTGGCCC...TGATAGCTTCTTGGAGTTCTTTGTTCTCAAGGACCTTGGAGTATGTTTTTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | TTACACTTAGTTAAACCTCAGATGTTAACCAAGAGAAGTGGAATGGTTTCCTTTAGGACGGATTGGAGCTaGCAGCATGCTAGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHLVKPQMLTKRSGMVSFRTDWS*QHASRL Trigger: CAGCCTGCTAGCATGCTGCAAGCTCCAATCCGTCCT...AAAGGAAACCATTCCACTTCTCTTGGTTAACATCTGAGGTTTAACTAAGTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | ATCCCACTATGTAGCAAACGTATGTGCTTTTGGTGCAGTAATTCTGCACTGTACTCTGGGGGCTCGATCTaGATATCATTAAACAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPLCSKRMCFWCSNSALYSGGSI*ISLNRA Trigger: AGCTCTGTTTAATGATATCAAGATCGAGCCCCCAGA...GTACAGTGCAGAATTACTGCACCAAAAGCACATACGTTTGCTACATAGTGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | TTACACTTAGTTAAACCTCAGATGTTAACCAAGAGAAGTGGAATGGTTTCCTTTGAGGCGGGGTCAACTTaGACCGATCCAGCACTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LHLVKPQMLTKRSGMVSFEAGST*TDPALL Trigger: CAAAAGTGCTGGATCGGTCAAAGTTGACCCCGCCTC...AAAGGAAACCATTCCACTTCTCTTGGTTAACATCTGAGGTTTAACTAAGTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | GCCAGGAACAGAAGGTTTTATGCCCCAGAGAATATTATGAACAGTCTGATTGGGAAGAGCCACTTTCAATaGCACTCTCATCACTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: ARNRRFYAPENIMNSLIGKSHFQ*HSHHYH Trigger: GTGATAGTGATGAGAGTGCAATTGAAAGTGGCTCTT...CCCAATCAGACTGTTCATAATATTCTCTGGGGCATAAAACCTTCTGTTCCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | TTACACTTAGTTAAACCTCAGATGTTAACCAAGAGAAGTGGAATGGTTTCCTTTTCTGGGGGCTCGATCTaGATATCATTAAACAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LHLVKPQMLTKRSGMVSFSGGSI*ISLNRA Trigger: AGCTCTGTTTAATGATATCAAGATCGAGCCCCCAGA...AAAGGAAACCATTCCACTTCTCTTGGTTAACATCTGAGGTTTAACTAAGTGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS-3UTR CAA 90 bp | TTACACTTAGTTAAACCTCAGATGTTAACCAAGAGAAGTGGAATGGTTTCCTTTAAGAGCCACTTTCAATaGCACTCTCATCACTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LHLVKPQMLTKRSGMVSFKSHFQ*HSHHYH Trigger: GTGATAGTGATGAGAGTGCAATTGAAAGTGGCTCTT...AAAGGAAACCATTCCACTTCTCTTGGTTAACATCTGAGGTTTAACTAAGTGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS TCA 72 bp | AGCATGCTAGCAGGCTGGAGCGGAGCCTTCGGTTTGTaGAAGGAGAGATCAACAGGTTCCACCTGGGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: SMLAGWSGAFGL*KERSTGSTWGM Trigger: CATGCCCCAGGTGGAACCTGTTGATCTCTCCTTTCACAAACCGAAGGCTCCGCTCCAGCCTGCTAGCATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS TCA 72 bp | GTGACTGTGTCAGCTGAAGTAGGCACCATAATGGCTTaGGGTGCAGTCGGTGGCTTGGGAGGACGGATTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VTVSAEVGTIMA*GAVGGLGGRIG Trigger: TCCAATCCGTCCTCCCAAGCCACCGACTGCACCTCAAGCCATTATGGTGCCTACTTCAGCTGACACAGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS TCA 72 bp | GAAAGGAGAGATCAACAGGTTCCACCTGGGGCATGTTaGAATCACTCTCCAGGAGCTCTTCTGGGGGCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: ERRDQQVPPGAC*NHSPGALLGAR Trigger: TCGAGCCCCCAGAAGAGCTCCTGGAGAGTGATTTCAACATGCCCCAGGTGGAACCTGTTGATCTCTCCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS CCA 72 bp | AGAGCCACTTTCAATTGCACTCTCATCACTATCACTTaGAAACTCCAGTGGGCACATGGAGGCGGGGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: RATFNCTLITIT*KLQWAHGGGVN Trigger: GTTGACCCCGCCTCCATGTGCCCACTGGAGTTTCCAAGTGATAGTGATGAGAGTGCAATTGAAAGTGGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS CAA 72 bp | AAGAGCCACTTTCAATTGCACTCTCATCACTATCACTaGGAAACTCCAGTGGGCACATGGAGGCGGGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: KSHFQLHSHHYH*ETPVGTWRRGQ Trigger: TTGACCCCGCCTCCATGTGCCCACTGGAGTTTCCAAGTGATAGTGATGAGAGTGCAATTGAAAGTGGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS CAA 90 bp | GTCTTCTCTTTAAGTCAAGAGACTCTTCTCCCTGCATGTGGACCATaGTCGCTGGCTCATGATGAAATCCCTGGAGACTCTGTAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VFSLSQETLLPACGP*SLAHDEIPGDSVRL Trigger: CAGCCTTACAGAGTCTCCAGGGATTTCATCATGAGCCAGCGACAATGGTCCACATGCAGGGAGAAGAGTCTCTTGACTTAAAGAGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS GCA 72 bp | CTGGTCGGAACAGGGCCAGTGACCTGTTTGAATACCTaGATCGAACCACTTTCTGATTTAATTCGGACATCC | + |
|
Preference number: 6 (lower is better) Translates to: LVGTGPVTCLNT*IEPLSDLIRTS Trigger: GGATGTCCGAATTAAATCAGAAAGTGGTTCGATGCAGGTATTCAAACAGGTCACTGGCCCTGTTCCGACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS CAA 72 bp | TTAAGTCAAGAGACTCTTCTCCCTGCATGTGGACCATaGTCGCTGGCTCATGATGAAATCCCTGGAGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSQETLLPACGP*SLAHDEIPGDS Trigger: AGAGTCTCCAGGGATTTCATCATGAGCCAGCGACAATGGTCCACATGCAGGGAGAAGAGTCTCTTGACTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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| CDS CAA 72 bp | CCTGGAGACTCTGTAAGGCTGAAGAGCCACTTTCAATaGCACTCTCATCACTATCACTTGGAAACTCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PGDSVRLKSHFQ*HSHHYHLETPV Trigger: CACTGGAGTTTCCAAGTGATAGTGATGAGAGTGCAATTGAAAGTGGCTCTTCAGCCTTACAGAGTCTCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039545.5 ENSMUST00000112574.9 |
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