Pregenerated sensors for KLF7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025959Ensembl transcript IDs: ENSMUST00000055001.10, ENSMUST00000114086.8, ENSMUST00000135075.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GCCATCAGGAAGGCAGCAATGGACACTCAGGCTGGGCCCTCCGGTTaGAAATTAAGCATCACCATGTTTCCCGAAATGCAACCCAGACAC | + |
Preference number: 1 (lower is better) Translates to: AIRKAAMDTQAGPSG*KLSITMFPEMQPRH Trigger: GTGTCTGGGTTGCATTTCGGGAAACATGGTGATGCTTAATTTGCAACCGGAGGGCCCAGCCTGAGTGTCCATTGCTGCCTTCCTGATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR TCA 90 bp | ACCCACCAAATTCTCAGGCCAATTCCCACAGCCAACAAAGGACTCTaGAGCAAGCAAGCACCATCATGGTATCTCAGTGCGCCCTGCTCC | + |
Preference number: 1 (lower is better) Translates to: THQILRPIPTANKGL*SKQAPSWYLSAPCS Trigger: GGAGCAGGGCGCACTGAGATACCATGATGGTGCTTGCTTGCTTCAGAGTCCTTTGTTGGCTGTGGGAATTGGCCTGAGAATTTGGTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR TCA 90 bp | ACACCCAGTCCTCTTGGGAGCAAAGGACACGTTGAGGTTATTTCTTaGAAAACCTGCTCCCTCCAGAGGCATCAAGCAACTGCCTCTGCA | + |
Preference number: 1 (lower is better) Translates to: TPSPLGSKGHVEVIS*KTCSLQRHQATASA Trigger: TGCAGAGGCAGTTGCTTGATGCCTCTGGAGGGAGCAGGTTTTTCAAGAAATAACCTCAACGTGTCCTTTGCTCCCAAGAGGACTGGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR GCA 90 bp | CAACAAAGGACTCTGAAGCAAGCAAGCACCATCATGGTATCTCAGTaGGCCCTGCTCCAAGAGAGATCAGGAGCAGATCACAAAGACCTC | + |
Preference number: 1 (lower is better) Translates to: QQRTLKQASTIMVSQ*ALLQERSGADHKDL Trigger: GAGGTCTTTGTGATCTGCTCCTGATCTCTCTTGGAGCAGGGCGCACTGAGATACCATGATGGTGCTTGCTTGCTTCAGAGTCCTTTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CCA 90 bp | CTAGAGAGTAAAAAGGAAAGTCATGGTGGCTGGGAAGTCATGTGTTaGGAGCAGGAAGGGGAGAGGGTTGTGGGTAGCTGGGAAGTATGT | + |
Preference number: 1 (lower is better) Translates to: LESKKESHGGWEVMC*EQEGERVVGSWEVC Trigger: ACATACTTCCCAGCTACCCACAACCCTCTCCCCTTCCTGCTCCCAACACATGACTTCCCAGCCACCATGACTTTCCTTTTTACTCTCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR TCA 90 bp | GACACCATTCTAGACACCCAGTCCTCTTGGGAGCAAAGGACACGTTaGGGTTATTTCTTGAAAAACCTGCTCCCTCCAGAGGCATCAAGC | + |
Preference number: 1 (lower is better) Translates to: DTILDTQSSWEQRTR*GYFLKNLLPPEASS Trigger: GCTTGATGCCTCTGGAGGGAGCAGGTTTTTCAAGAAATAACCTCAACGTGTCCTTTGCTCCCAAGAGGACTGGGTGTCTAGAATGGTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CCA 90 bp | ACTGTGAAGAGGATACTAGAGAGTAAAAAGGAAAGTCATGGTGGCTaGGAAGTCATGTGTTGGGAGCAGGAAGGGGAGAGGGTTGTGGGT | + |
Preference number: 1 (lower is better) Translates to: TVKRILESKKESHGG*EVMCWEQEGERVVG Trigger: ACCCACAACCCTCTCCCCTTCCTGCTCCCAACACATGACTTCCCAGCCACCATGACTTTCCTTTTTACTCTCTAGTATCCTCTTCACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CCA 90 bp | GTGAAAATTAATCACACTGAGGTTTGCATTGGCAAACCATTTCTTTaGGCTTTCCCATGGGATGCAGGAGTGGAGGCTGCAGGCAGGACA | + |
Preference number: 1 (lower is better) Translates to: VKINHTEVCIGKPFL*AFPWDAGVEAAGRT Trigger: TGTCCTGCCTGCAGCCTCCACTCCTGCATCCCATGGGAAAGCCCAAAGAAATGGTTTGCCAATGCAAACCTCAGTGTGATTAATTTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR GCA 90 bp | TACCAAACATTTCAGACACCAAAGAGGACCAAGGGGCCTTTGTTCTaGCACATTCAAATGAAACCACAGATGGCGAGAGGGACAAACAGC | + |
Preference number: 1 (lower is better) Translates to: YQTFQTPKRTKGPLF*HIQMKPQMARGTNS Trigger: GCTGTTTGTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCAGAACAAAGGCCCCTTGGTCCTCTTTGGTGTCTGAAATGTTTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CCA 90 bp | AGGACAGCCTATGCCACATTTATGCCAGGCTTGCCCTTTCAAATCTaGGATCCCCTTGGAATGCTAGGAGGTAATGTCTTAAATTGTGAA | + |
Preference number: 1 (lower is better) Translates to: RTAYATFMPGLPFQI*DPLGMLGGNVLNCE Trigger: TTCACAATTTAAGACATTACCTCCTAGCATTCCAAGGGGATCCCAGATTTGAAAGGGCAAGCCTGGCATAAATGTGGCATAGGCTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR TCA 90 bp | CGCCCTGCTCCAAGAGAGATCAGGAGCAGATCACAAAGACCTCACTaGTACAAAAGAGAAATTACCAAACATTTCAGACACCAAAGAGGA | + |
Preference number: 1 (lower is better) Translates to: RPAPREIRSRSQRPH*YKREITKHFRHQRG Trigger: TCCTCTTTGGTGTCTGAAATGTTTGGTAATTTCTCTTTTGTATCAGTGAGGTCTTTGTGATCTGCTCCTGATCTCTCTTGGAGCAGGGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR GCA 90 bp | TGTGGTGGTTGGAGGGGAGGCTCCAAAAACATTAAACATTTAGTTTaGCTTTGTGTTAGCAAGGAGATCTTGGCCCTAACAGGTGTATTT | + |
Preference number: 1 (lower is better) Translates to: CGGWRGGSKNIKHLV*LCVSKEILALTGVF Trigger: AAATACACCTGTTAGGGCCAAGATCTCCTTGCTAACACAAAGGCAAACTAAATGTTTAATGTTTTTGGAGCCTCCCCTCCAACCACCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CCA 90 bp | CCTAACAGGTGTATTTTTCCTCCCTGGGATGAAGCAGAAGTGAGATaGAAGAAATCAAATTGTCTGAGCTTGAGTGAGCAAATGCATGCT | + |
Preference number: 1 (lower is better) Translates to: PNRCIFPPWDEAEVR*KKSNCLSLSEQMHA Trigger: AGCATGCATTTGCTCACTCAAGCTCAGACAATTTGATTTCTTCCATCTCACTTCTGCTTCATCCCAGGGAGGAAAAATACACCTGTTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR TCA 90 bp | AGAGGAACCAAGAGAGGAGATTTAAGTGTTAAAAACAAGAAACCCTaGAGCTCAGGCATTAGTCATGAGACACCACATTTCATAGGAGCA | + |
Preference number: 1 (lower is better) Translates to: RGTKRGDLSVKNKKP*SSGISHETPHFIGA Trigger: TGCTCCTATGAAATGTGGTGTCTCATGACTAATGCCTGAGCTTCAGGGTTTCTTGTTTTTAACACTTAAATCTCCTCTCTTGGTTCCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR GCA 90 bp | TCACTCCTGTTGTGGATACCTGTTTCCCGAGGACTTACTGGAAAATaGAGAACACCTGAAGAATACAGTACTATATTGAAAGATGCTCAT | + |
Preference number: 1 (lower is better) Translates to: SLLLWIPVSRGLTGK*RTPEEYSTILKDAH Trigger: ATGAGCATCTTTCAATATAGTACTGTATTCTTCAGGTGTTCTGCATTTTCCAGTAAGTCCTCGGGAAACAGGTATCCACAACAGGAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR GCA 90 bp | GAAGAATACAGTACTATATTGAAAGATGCTCATAAGAAAGTTAATTaGAGCTTAGCTATCCCCTTTCTGGGATCTGTTAGAGGAACCAAG | + |
Preference number: 1 (lower is better) Translates to: EEYSTILKDAHKKVN*SLAIPFLGSVRGTK Trigger: CTTGGTTCCTCTAACAGATCCCAGAAAGGGGATAGCTAAGCTGCAATTAACTTTCTTATGAGCATCTTTCAATATAGTACTGTATTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR TCA 90 bp | ATGCTCAAGAGGACAGCCTATGCCACATTTATGCCAGGCTTGCCCTTTCAAATCGCAGTTCTCCCCGCCTaGAGTCCAGCCCTCTGCCTC | + |
Preference number: 2 (lower is better) Translates to: MLKRTAYATFMPGLPFQIAVLPA*SPALCL Trigger: GAGGCAGAGGGCTGGACTTCAGGCGGGGAGAACTGC...GATTTGAAAGGGCAAGCCTGGCATAAATGTGGCATAGGCTGTCCTCTTGAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CCA 90 bp | CCATCTGATTGGCTGCTTCGAGAGCTAGACATCCAGGTGCCGAGAGAGTCCTGGCTTGCCGAGTTCACCTaGCTTCCTTCTTCCTTGTCT | + |
Preference number: 2 (lower is better) Translates to: PSDWLLRELDIQVPRESWLAEFT*LPSSLS Trigger: AGACAAGGAAGAAGGAAGCCAGGTGAACTCGGCAAG...CCAGGACTCTCTCGGCACCTGGATGTCTAGCTCTCGAAGCAGCCAATCAGATGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CAA 90 bp | TGCCATCAGGAAGGCAGCAATGGACACTCAGGCTGGGCCCTCCGGTaGCAAATTAAGCATCACCATGTTTCCCGAAATGCAACCCAGACA | + |
Preference number: 2 (lower is better) Translates to: CHQEGSNGHSGWALR*QIKHHHVSRNATQT Trigger: TGTCTGGGTTGCATTTCGGGAAACATGGTGATGCTTAATTTGCAACCGGAGGGCCCAGCCTGAGTGTCCATTGCTGCCTTCCTGATGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR TCA 90 bp | CAAGGGGCCTTTGTTCTGCCACATTCAAATGAAACCACAGATGGCGAGAGGGACCATGATCTCAGAGGGTaGGTGAGGGAAGGGATGGGA | + |
Preference number: 2 (lower is better) Translates to: QGAFVLPHSNETTDGERDHDLRG*VREGMG Trigger: TCCCATCCCTTCCCTCACTCACCCTCTGAGATCATG...GTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCAGAACAAAGGCCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR GCA 90 bp | CAAGGGGCCTTTGTTCTGCCACATTCAAATGAAACCACAGATGGCGAGAGGGACTCGGACATTGGCTGCTaGCATGGCAACTCTGGCCTT | + |
Preference number: 2 (lower is better) Translates to: QGAFVLPHSNETTDGERDSDIGC*HGNSGL Trigger: AAGGCCAGAGTTGCCATGGCAGCAGCCAATGTCCGA...GTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCAGAACAAAGGCCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR TCA 90 bp | CCCACCAAATTCTCAGGCCAATTCCCACAGCCAACAAAGGACTCTGAAGCAAGCCGCCTTAAGGAGGGATaGGAGAACTCTGATGTCCCA | + |
Preference number: 2 (lower is better) Translates to: PTKFSGQFPQPTKDSEASRLKEG*ENSDVP Trigger: TGGGACATCAGAGTTCTCTCATCCCTCCTTAAGGCG...GCTTGCTTCAGAGTCCTTTGTTGGCTGTGGGAATTGGCCTGAGAATTTGGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR TCA 90 bp | CAAAGCCATGCGCTTAGCACCCACCAAATTCTCAGGCCAATTCCCACAGCCAACAACAAGTGGGTACCATaGTCTCAGAGGGTGAGTGAG | + |
Preference number: 2 (lower is better) Translates to: QSHALSTHQILRPIPTANNKWVP*SQRVSE Trigger: CTCACTCACCCTCTGAGATCATGGTACCCACTTGTT...GTTGGCTGTGGGAATTGGCCTGAGAATTTGGTGGGTGCTAAGCGCATGGCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR TCA 90 bp | ACTCAGGCTGGGCCCTCCGGTTGCAAATTAAGCATCACCATGTTTCCCGAAATGAACTGCCTCTGCAGTTaGGGAAGAATGGAGGAGGAC | + |
Preference number: 2 (lower is better) Translates to: TQAGPSGCKLSITMFPEMNCLCS*GRMEED Trigger: GTCCTCCTCCATTCTTCCTCAACTGCAGAGGCAGTT...CATTTCGGGAAACATGGTGATGCTTAATTTGCAACCGGAGGGCCCAGCCTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR GCA 90 bp | GTGACGACTTTGATCTCACTCCTGTTGTGGATACCTGTTTCCCGAGGACTTACTGCGAGAACTTTCTTCTaGGAGGCAGTTCTCCCCGCC | + |
Preference number: 2 (lower is better) Translates to: VTTLISLLLWIPVSRGLTARTFF*EAVLPA Trigger: GGCGGGGAGAACTGCCTCGCAGAAGAAAGTTCTCGC...AGTAAGTCCTCGGGAAACAGGTATCCACAACAGGAGTGAGATCAAAGTCGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CCA 90 bp | GTGACGACTTTGATCTCACTCCTGTTGTGGATACCTGTTTCCCGAGGACTTACTCATTGGCTGCTGCCATaGCAACTCTGGCCTTTGCGG | + |
Preference number: 2 (lower is better) Translates to: VTTLISLLLWIPVSRGLTHWLLP*QLWPLR Trigger: CCGCAAAGGCCAGAGTTGCCATGGCAGCAGCCAATG...AGTAAGTCCTCGGGAAACAGGTATCCACAACAGGAGTGAGATCAAAGTCGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CCA 90 bp | CAAAGCCATGCGCTTAGCACCCACCAAATTCTCAGGCCAATTCCCACAGCCAACATTTCCTTCGGACATTaGCTGCTGCCATGGCAACTC | + |
Preference number: 2 (lower is better) Translates to: QSHALSTHQILRPIPTANISFGH*LLPWQL Trigger: GAGTTGCCATGGCAGCAGCCAATGTCCGAAGGAAAT...GTTGGCTGTGGGAATTGGCCTGAGAATTTGGTGGGTGCTAAGCGCATGGCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CCA 90 bp | CAAAGCCATGCGCTTAGCACCCACCAAATTCTCAGGCCAATTCCCACAGCCAACTGCGTGCATTCATGCTaGACACTGACTGCTACAGAC | + |
Preference number: 2 (lower is better) Translates to: QSHALSTHQILRPIPTANCVHSC*TLTATD Trigger: GTCTGTAGCAGTCAGTGTCCAGCATGAATGCACGCA...GTTGGCTGTGGGAATTGGCCTGAGAATTTGGTGGGTGCTAAGCGCATGGCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR GCA 90 bp | AGATTAGGCACTGGTGGCTACCCCTCTTATACCTCAGTAGCCTGTTTTCCTTCTGTAAGCCTCTTGGACTaGGGCCACCATGGAGACAGA | + |
Preference number: 2 (lower is better) Translates to: RLGTGGYPSYTSVACFPSVSLLD*GHHGDR Trigger: TCTGTCTCCATGGTGGCCGCAGTCCAAGAGGCTTAC...AGAAGGAAAACAGGCTACTGAGGTATAAGAGGGGTAGCCACCAGTGCCTAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR TCA 90 bp | GTGACGACTTTGATCTCACTCCTGTTGTGGATACCTGTTTCCCGAGGACTTACTCAACCGACAGTTCTGTaGGGAAGTCTGACGTACGGA | + |
Preference number: 2 (lower is better) Translates to: VTTLISLLLWIPVSRGLTQPTVL*GSLTYG Trigger: TCCGTACGTCAGACTTCCTCACAGAACTGTCGGTTG...AGTAAGTCCTCGGGAAACAGGTATCCACAACAGGAGTGAGATCAAAGTCGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR GCA 90 bp | GACACCAAAGAGGACCAAGGGGCCTTTGTTCTGCCACATTCAAATGAAACCACAAGCCCTCTGCCTCACTaGATTTCCTTCGGACATTGG | + |
Preference number: 2 (lower is better) Translates to: DTKEDQGAFVLPHSNETTSPLPH*ISFGHW Trigger: CCAATGTCCGAAGGAAATGCAGTGAGGCAGAGGGCT...TGTGGTTTCATTTGAATGTGGCAGAACAAAGGCCCCTTGGTCCTCTTTGGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR GCA 90 bp | GTGACGACTTTGATCTCACTCCTGTTGTGGATACCTGTTTCCCGAGGACTTACTGTGTGTATGCACCCGTaGGCACACGTGTGTGTTTAC | + |
Preference number: 2 (lower is better) Translates to: VTTLISLLLWIPVSRGLTVCMHP*AHVCVY Trigger: GTAAACACACACGTGTGCGCACGGGTGCATACACAC...AGTAAGTCCTCGGGAAACAGGTATCCACAACAGGAGTGAGATCAAAGTCGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR GCA 90 bp | ACTCAGGCTGGGCCCTCCGGTTGCAAATTAAGCATCACCATGTTTCCCGAAATGCCTAGGAATCCATCCTaGTCATCAGACATGAGGTTG | + |
Preference number: 2 (lower is better) Translates to: TQAGPSGCKLSITMFPEMPRNPS*SSDMRL Trigger: CAACCTCATGTCTGATGAGCAGGATGGATTCCTAGG...CATTTCGGGAAACATGGTGATGCTTAATTTGCAACCGGAGGGCCCAGCCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CCA 90 bp | TGCCACATTCAAATGAAACCACAGATGGCGAGAGGGACAAACAGCAATGATTACGGACTGCGGCCACCATaGAGACAGACATCCGTTTGC | + |
Preference number: 2 (lower is better) Translates to: CHIQMKPQMARGTNSNDYGLRPP*RQTSVC Trigger: GCAAACGGATGTCTGTCTCCATGGTGGCCGCAGTCC...GTAATCATTGCTGTTTGTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR TCA 90 bp | CTCATCAGACATGAGGTTGGCTCTCTTTTTACCCTGTTATCATCAGGCGATCAAGCACTGGCAAGAAGGTaGGGCTCAAGGGGTATACTG | + |
Preference number: 2 (lower is better) Translates to: LIRHEVGSLFTLLSSGDQALARR*GSRGIL Trigger: CAGTATACCCCTTGAGCCTCACCTTCTTGCCAGTGC...TTGATCGCCTGATGATAACAGGGTAAAAAGAGAGCCAACCTCATGTCTGATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR TCA 90 bp | CTCATCAGACATGAGGTTGGCTCTCTTTTTACCCTGTTATCATCAGGCGATCAATCCCATGGTATGCCCTaGTGGACTGGCTGCAGAATG | + |
Preference number: 2 (lower is better) Translates to: LIRHEVGSLFTLLSSGDQSHGMP*WTGCRM Trigger: CATTCTGCAGCCAGTCCATCAGGGCATACCATGGGA...TTGATCGCCTGATGATAACAGGGTAAAAAGAGAGCCAACCTCATGTCTGATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR GCA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTAGGCCCATAGAGCTGTaGACGAGACAGGCCTGCTTG | + |
Preference number: 2 (lower is better) Translates to: FSASSTTCVRNDILFVPSRPIEL*TRQACL Trigger: CAAGCAGGCCTGTCTCGTGCACAGCTCTATGGGCCT...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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3UTR-3UTR GCA 90 bp | CTCATCAGACATGAGGTTGGCTCTCTTTTTACCCTGTTATCATCAGGCGATCAAAAAAGGGTAGAGGTGTaGATGGGGAGGTGGCAGCAG | + |
Preference number: 2 (lower is better) Translates to: LIRHEVGSLFTLLSSGDQKRVEV*MGRWQQ Trigger: CTGCTGCCACCTCCCCATGCACACCTCTACCCTTTT...TTGATCGCCTGATGATAACAGGGTAAAAAGAGAGCCAACCTCATGTCTGATGAG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CAA 90 bp | GATAGAATGCTCAAGAGGACAGCCTATGCCACATTTATGCCAGGCTaGCCCTTTCAAATCTGGGATCCCCTTGGAATGCTAGGAGGTAAT | + |
Preference number: 2 (lower is better) Translates to: DRMLKRTAYATFMPG*PFQIWDPLGMLGGN Trigger: ATTACCTCCTAGCATTCCAAGGGGATCCCAGATTTGAAAGGGCAAGCCTGGCATAAATGTGGCATAGGCTGTCCTCTTGAGCATTCTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR TCA 90 bp | AGATTAGGCACTGGTGGCTACCCCTCTTATACCTCAGTAGCCTGTTTTCCTTCTAGGGAAGGGATGGGATaGTGTTTTGTGAAGCCTCTA | + |
Preference number: 2 (lower is better) Translates to: RLGTGGYPSYTSVACFPSREGMG*CFVKPL Trigger: TAGAGGCTTCACAAAACATCATCCCATCCCTTCCCT...AGAAGGAAAACAGGCTACTGAGGTATAAGAGGGGTAGCCACCAGTGCCTAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CCA 90 bp | GGATACCTGTTTCCCGAGGACTTACTGGAAAATGCAGAACACCTGAAGAATACAAAATCGTGGCAGCCATaGCTTAATGCCATCCCTGGC | + |
Preference number: 2 (lower is better) Translates to: GYLFPEDLLENAEHLKNTKSWQP*LNAIPG Trigger: GCCAGGGATGGCATTAAGCCATGGCTGCCACGATTT...TGTATTCTTCAGGTGTTCTGCATTTTCCAGTAAGTCCTCGGGAAACAGGTATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CCA 90 bp | CTCATCAGACATGAGGTTGGCTCTCTTTTTACCCTGTTATCATCAGGCGATCAAGTGGTTGAAGGGCTTTaGGAAGGAAACTGGGACAGG | + |
Preference number: 2 (lower is better) Translates to: LIRHEVGSLFTLLSSGDQVVEGL*EGNWDR Trigger: CCTGTCCCAGTTTCCTTCCCAAAGCCCTTCAACCAC...TTGATCGCCTGATGATAACAGGGTAAAAAGAGAGCCAACCTCATGTCTGATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CCA 90 bp | AGATTAGGCACTGGTGGCTACCCCTCTTATACCTCAGTAGCCTGTTTTCCTTCTATCTCACTCCTGTTGTaGATACCTGTTTCCCGAGGA | + |
Preference number: 2 (lower is better) Translates to: RLGTGGYPSYTSVACFPSISLLL*IPVSRG Trigger: TCCTCGGGAAACAGGTATCCACAACAGGAGTGAGAT...AGAAGGAAAACAGGCTACTGAGGTATAAGAGGGGTAGCCACCAGTGCCTAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CAA 90 bp | GAAAAACCTGCTCCCTCCAGAGGCATCAAGCAACTGCCTCTGCAGTaGAGGAAGAATGGAGGAGGACGTGTCATAAACCTATTTCTAAAA | + |
Preference number: 2 (lower is better) Translates to: EKPAPSRGIKQLPLQ*RKNGGGRVINLFLK Trigger: TTTTAGAAATAGGTTTATGACACGTCCTCCTCCATTCTTCCTCAACTGCAGAGGCAGTTGCTTGATGCCTCTGGAGGGAGCAGGTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR TCA 90 bp | CAAGGGGCCTTTGTTCTGCCACATTCAAATGAAACCACAGATGGCGAGAGGGACTTGGATGTGTGTGTGTaGTATGCAAGTGAGCAATAT | + |
Preference number: 2 (lower is better) Translates to: QGAFVLPHSNETTDGERDLDVCV*YASEQY Trigger: ATATTGCTCACTTGCATATCACACACACACATCCAA...GTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCAGAACAAAGGCCCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR TCA 90 bp | TGCCACATTCAAATGAAACCACAGATGGCGAGAGGGACAAACAGCAATGATTACATTCATGCTGGACACTaGCTGCTACAGACTGGGAAG | + |
Preference number: 2 (lower is better) Translates to: CHIQMKPQMARGTNSNDYIHAGH*LLQTGK Trigger: CTTCCCAGTCTGTAGCAGTCAGTGTCCAGCATGAAT...GTAATCATTGCTGTTTGTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR GCA 90 bp | AGATTAGGCACTGGTGGCTACCCCTCTTATACCTCAGTAGCCTGTTTTCCTTCTGTGCGTGTACATGTATaGACACAGAGGTTTGTAAGC | + |
Preference number: 2 (lower is better) Translates to: RLGTGGYPSYTSVACFPSVRVHV*TQRFVS Trigger: GCTTACAAACCTCTGTGTGCATACATGTACACGCAC...AGAAGGAAAACAGGCTACTGAGGTATAAGAGGGGTAGCCACCAGTGCCTAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR GCA 90 bp | GTGACGACTTTGATCTCACTCCTGTTGTGGATACCTGTTTCCCGAGGACTTACTATTGTCAGCAAGCAGTaGTCCAGAGCAGTTTCTAAG | + |
Preference number: 2 (lower is better) Translates to: VTTLISLLLWIPVSRGLTIVSKQ*SRAVSK Trigger: CTTAGAAACTGCTCTGGAGCACTGCTTGCTGACAAT...AGTAAGTCCTCGGGAAACAGGTATCCACAACAGGAGTGAGATCAAAGTCGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
||
3UTR-3UTR CCA 90 bp | TGCCACATTCAAATGAAACCACAGATGGCGAGAGGGACAAACAGCAATGATTACCTGCCATGGCAACTCTaGCCTTTGCGGTGTTTTGTT | + |
Preference number: 2 (lower is better) Translates to: CHIQMKPQMARGTNSNDYLPWQL*PLRCFV Trigger: AACAAAACACCGCAAAGGCCAGAGTTGCCATGGCAG...GTAATCATTGCTGTTTGTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
||
3UTR-3UTR CCA 90 bp | TATCTCAGTGCGCCCTGCTCCAAGAGAGATCAGGAGCAGATCACAAAGACCTCATGCTTTGTTTTCCATTaGCAACATTGGGAAGTGATC | + |
Preference number: 2 (lower is better) Translates to: YLSAPCSKRDQEQITKTSCFVFH*QHWEVI Trigger: GATCACTTCCCAATGTTGCCAATGGAAAACAAAGCA...TGAGGTCTTTGTGATCTGCTCCTGATCTCTCTTGGAGCAGGGCGCACTGAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
||
3UTR-3UTR CCA 90 bp | TGCCACATTCAAATGAAACCACAGATGGCGAGAGGGACAAACAGCAATGATTACGATGTCCCATCTGATTaGCTGCTTCGAGAGCTAGAC | + |
Preference number: 2 (lower is better) Translates to: CHIQMKPQMARGTNSNDYDVPSD*LLRELD Trigger: GTCTAGCTCTCGAAGCAGCCAATCAGATGGGACATC...GTAATCATTGCTGTTTGTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
||
3UTR-3UTR CCA 90 bp | GTGACGACTTTGATCTCACTCCTGTTGTGGATACCTGTTTCCCGAGGACTTACTGCAGTTGAGGAAGAATaGAGGAGGACGTGTCATAAA | + |
Preference number: 2 (lower is better) Translates to: VTTLISLLLWIPVSRGLTAVEEE*RRTCHK Trigger: TTTATGACACGTCCTCCTCCATTCTTCCTCAACTGC...AGTAAGTCCTCGGGAAACAGGTATCCACAACAGGAGTGAGATCAAAGTCGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
||
3UTR-3UTR GCA 90 bp | CTCATCAGACATGAGGTTGGCTCTCTTTTTACCCTGTTATCATCAGGCGATCAAGGCAACTCTGGCCTTTaGGGTGTTTTGTTCTTGTTG | + |
Preference number: 2 (lower is better) Translates to: LIRHEVGSLFTLLSSGDQGNSGL*GVLFLL Trigger: CAACAAGAACAAAACACCGCAAAGGCCAGAGTTGCC...TTGATCGCCTGATGATAACAGGGTAAAAAGAGAGCCAACCTCATGTCTGATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
||
3UTR-3UTR GCA 90 bp | CTCATCAGACATGAGGTTGGCTCTCTTTTTACCCTGTTATCATCAGGCGATCAAAATACCCACCCCGCTTaGTTGCATAGGCCAGTTAAT | + |
Preference number: 2 (lower is better) Translates to: LIRHEVGSLFTLLSSGDQNTHPA*LHRPVN Trigger: ATTAACTGGCCTATGCAAGCAAGCGGGGTGGGTATT...TTGATCGCCTGATGATAACAGGGTAAAAAGAGAGCCAACCTCATGTCTGATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
||
3UTR-3UTR GCA 90 bp | CTCATCAGACATGAGGTTGGCTCTCTTTTTACCCTGTTATCATCAGGCGATCAACAAGAGGACAGCCTATaGCACATTTATGCCAGGCTT | + |
Preference number: 2 (lower is better) Translates to: LIRHEVGSLFTLLSSGDQQEDSL*HIYARL Trigger: AAGCCTGGCATAAATGTGGCATAGGCTGTCCTCTTG...TTGATCGCCTGATGATAACAGGGTAAAAAGAGAGCCAACCTCATGTCTGATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
||
3UTR-3UTR CCA 90 bp | CAAGGGGCCTTTGTTCTGCCACATTCAAATGAAACCACAGATGGCGAGAGGGACCCTTCATTCCCACAATaGCATTTTGAAGTATGCATT | + |
Preference number: 2 (lower is better) Translates to: QGAFVLPHSNETTDGERDPSFPQ*HFEVCI Trigger: AATGCATACTTCAAAATGCCATTGTGGGAATGAAGG...GTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCAGAACAAAGGCCCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
||
3UTR-3UTR CCA 90 bp | AGATTAGGCACTGGTGGCTACCCCTCTTATACCTCAGTAGCCTGTTTTCCTTCTATTGCTTCTGGCAAATaGAGTATGTGTGTGTGTGTG | + |
Preference number: 2 (lower is better) Translates to: RLGTGGYPSYTSVACFPSIASGK*SMCVCV Trigger: CACACACACACACATACTCCATTTGCCAGAAGCAAT...AGAAGGAAAACAGGCTACTGAGGTATAAGAGGGGTAGCCACCAGTGCCTAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
||
3UTR-3UTR GCA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTCAGACCCCAACCTACTaGACTATTTCCCTCCTTAGT | + |
Preference number: 2 (lower is better) Translates to: FSASSTTCVRNDILFVPSQTPTY*TISLLS Trigger: ACTAAGGAGGGAAATAGTGCAGTAGGTTGGGGTCTG...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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3UTR-3UTR GCA 90 bp | GGATACCTGTTTCCCGAGGACTTACTGGAAAATGCAGAACACCTGAAGAATACACAAATGGGTTGTTCATaGTCCCTTCCTCTTTCCTTC | + |
Preference number: 2 (lower is better) Translates to: GYLFPEDLLENAEHLKNTQMGCS*SLPLSF Trigger: GAAGGAAAGAGGAAGGGAGCATGAACAACCCATTTG...TGTATTCTTCAGGTGTTCTGCATTTTCCAGTAAGTCCTCGGGAAACAGGTATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
||
3UTR-3UTR CCA 90 bp | GGATACCTGTTTCCCGAGGACTTACTGGAAAATGCAGAACACCTGAAGAATACACTGACTGCTACAGACTaGGAAGAGAGAAACAAACCA | + |
Preference number: 2 (lower is better) Translates to: GYLFPEDLLENAEHLKNTLTATD*EERNKP Trigger: TGGTTTGTTTCTCTCTTCCCAGTCTGTAGCAGTCAG...TGTATTCTTCAGGTGTTCTGCATTTTCCAGTAAGTCCTCGGGAAACAGGTATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CCA 90 bp | GGATACCTGTTTCCCGAGGACTTACTGGAAAATGCAGAACACCTGAAGAATACATTGCCCTTTCAAATCTaGGATCCCCTTGGAATGCTA | + |
Preference number: 2 (lower is better) Translates to: GYLFPEDLLENAEHLKNTLPFQI*DPLGML Trigger: TAGCATTCCAAGGGGATCCCAGATTTGAAAGGGCAA...TGTATTCTTCAGGTGTTCTGCATTTTCCAGTAAGTCCTCGGGAAACAGGTATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR GCA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTAGAAGTAAAATGTATTaGCAGGCCCATAGAGCTGTG | + |
Preference number: 2 (lower is better) Translates to: FSASSTTCVRNDILFVPSRSKMY*QAHRAV Trigger: CACAGCTCTATGGGCCTGGCAATACATTTTACTTCT...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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3UTR-3UTR GCA 90 bp | GTGACGACTTTGATCTCACTCCTGTTGTGGATACCTGTTTCCCGAGGACTTACTTTAAATATAGTTGAGTaGATGAGAGTGGATCTGTGT | + |
Preference number: 2 (lower is better) Translates to: VTTLISLLLWIPVSRGLTLNIVE*MRVDLC Trigger: ACACAGATCCACTCTCATGCACTCAACTATATTTAA...AGTAAGTCCTCGGGAAACAGGTATCCACAACAGGAGTGAGATCAAAGTCGTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CCA 90 bp | TGCCACATTCAAATGAAACCACAGATGGCGAGAGGGACAAACAGCAATGATTACGCAACCATAAGATGTTaGATTCTCTTATCACGTTGC | + |
Preference number: 2 (lower is better) Translates to: CHIQMKPQMARGTNSNDYATIRC*ILLSRC Trigger: GCAACGTGATAAGAGAATCCAACATCTTATGGTTGC...GTAATCATTGCTGTTTGTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
||
3UTR-3UTR TCA 90 bp | GGATACCTGTTTCCCGAGGACTTACTGGAAAATGCAGAACACCTGAAGAATACACCCACAATGGCATTTTaGAGTATGCATTTAACAAGT | + |
Preference number: 2 (lower is better) Translates to: GYLFPEDLLENAEHLKNTPTMAF*SMHLTS Trigger: ACTTGTTAAATGCATACTTCAAAATGCCATTGTGGG...TGTATTCTTCAGGTGTTCTGCATTTTCCAGTAAGTCCTCGGGAAACAGGTATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR GCA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTTACTACATAAGAGAGTaGATCTTTTCACCCTTGCAA | + |
Preference number: 2 (lower is better) Translates to: FSASSTTCVRNDILFVPSYYIRE*IFSPLQ Trigger: TTGCAAGGGTGAAAAGATGCACTCTCTTATGTAGTA...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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3UTR-3UTR CCA 90 bp | TGCCACATTCAAATGAAACCACAGATGGCGAGAGGGACAAACAGCAATGATTACATACATAATTGCTTCTaGCAAATGGAGTATGTGTGT | + |
Preference number: 2 (lower is better) Translates to: CHIQMKPQMARGTNSNDYIHNCF*QMEYVC Trigger: ACACACATACTCCATTTGCCAGAAGCAATTATGTAT...GTAATCATTGCTGTTTGTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR TCA 90 bp | AGTTTTCATGAATTTATTTCAGCCAAGTCTTTCTTAAGTTCCACCTGGGCAATATGTTTCAAATATCCATaGCACCATTCTAGACACCCA | + |
Preference number: 2 (lower is better) Translates to: SFHEFISAKSFLSSTWAICFKYP*HHSRHP Trigger: TGGGTGTCTAGAATGGTGTCATGGATATTTGAAACA...TATTGCCCAGGTGGAACTTAAGAAAGACTTGGCTGAAATAAATTCATGAAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR GCA 72 bp | AGTTCTCCCCGCCTGAAGTCCAGCCCTCTGCCTCACTaGATTTCCTTCGGACATTGGCTGCTGCCATGGCAA | + |
Preference number: 3 (lower is better) Translates to: SSPRLKSSPLPH*ISFGHWLLPWQ Trigger: TTGCCATGGCAGCAGCCAATGTCCGAAGGAAATGCAGTGAGGCAGAGGGCTGGACTTCAGGCGGGGAGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR TCA 72 bp | GGAGTGGAGGCTGCAGGCAGGACAGTTCTGAATGCTTaGGTTAGCCAACCCTCCCCCTCCCCCATTTGTTTT | + |
Preference number: 3 (lower is better) Translates to: GVEAAGRTVLNA*VSQPSPSPICF Trigger: AAAACAAATGGGGGAGGGGGAGGGTTGGCTAACTCAAGCATTCAGAACTGTCCTGCCTGCAGCCTCCACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR GCA 72 bp | AGCAAGCAAGCACCATCATGGTATCTCAGTGCGCCCTaGTCCAAGAGAGATCAGGAGCAGATCACAAAGACC | + |
Preference number: 3 (lower is better) Translates to: SKQAPSWYLSAP*SKRDQEQITKT Trigger: GGTCTTTGTGATCTGCTCCTGATCTCTCTTGGAGCAGGGCGCACTGAGATACCATGATGGTGCTTGCTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR GCA 72 bp | CATTGGCAAACCATTTCTTTGGGCTTTCCCATGGGATaGAGGAGTGGAGGCTGCAGGCAGGACAGTTCTGAA | + |
Preference number: 3 (lower is better) Translates to: HWQTISLGFPMG*RSGGCRQDSSE Trigger: TTCAGAACTGTCCTGCCTGCAGCCTCCACTCCTGCATCCCATGGGAAAGCCCAAAGAAATGGTTTGCCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CAA 90 bp | CCATCTGATTGGCTGCTTCGAGAGCTAGACATCCAGGTGCCGAGAGAGTCCTGGGAGACAGACATCCGTTaGCTTTGTTTTCCATTGGCA | + |
Preference number: 3 (lower is better) Translates to: PSDWLLRELDIQVPRESWETDIR*LCFPLA Trigger: TGCCAATGGAAAACAAAGCAAACGGATGTCTGTCTC...CCAGGACTCTCTCGGCACCTGGATGTCTAGCTCTCGAAGCAGCCAATCAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CAA 90 bp | ACTCAGGCTGGGCCCTCCGGTTGCAAATTAAGCATCACCATGTTTCCCGAAATGAGGCCTCTGTTGATCTaGGGTGCTCTAGGTCACAAG | + |
Preference number: 3 (lower is better) Translates to: TQAGPSGCKLSITMFPEMRPLLI*GALGHK Trigger: CTTGTGACCTAGAGCACCCAAGATCAACAGAGGCCT...CATTTCGGGAAACATGGTGATGCTTAATTTGCAACCGGAGGGCCCAGCCTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CAA 90 bp | GATGTCCCATCTGATTGGCTGCTTCGAGAGCTAGACATCCAGGTGCCGAGAGAGTGGCTTCCTTCTTCCTaGTCTTCTATCATCTGGCTA | + |
Preference number: 3 (lower is better) Translates to: DVPSDWLLRELDIQVPREWLPSS*SSIIWL Trigger: TAGCCAGATGATAGAAGACAAGGAAGAAGGAAGCCA...CTCTCTCGGCACCTGGATGTCTAGCTCTCGAAGCAGCCAATCAGATGGGACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CAA 90 bp | GACACCAAAGAGGACCAAGGGGCCTTTGTTCTGCCACATTCAAATGAAACCACAACCCACCCCGCTTGCTaGCATAGGCCAGTTAATGGT | + |
Preference number: 3 (lower is better) Translates to: DTKEDQGAFVLPHSNETTTHPAC*HRPVNG Trigger: ACCATTAACTGGCCTATGCAAGCAAGCGGGGTGGGT...TGTGGTTTCATTTGAATGTGGCAGAACAAAGGCCCCTTGGTCCTCTTTGGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR GCA 72 bp | CACGTTGCACTGAGAAGTTATGTAAGCCTCTTGGACTaGGGCCACCATGGAGACAGACATCCGTTTGCTTTG | + |
Preference number: 3 (lower is better) Translates to: HVALRSYVSLLD*GHHGDRHPFAL Trigger: CAAAGCAAACGGATGTCTGTCTCCATGGTGGCCGCAGTCCAAGAGGCTTACATAACTTCTCAGTGCAACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CAA 90 bp | CAAGGGGCCTTTGTTCTGCCACATTCAAATGAAACCACAGATGGCGAGAGGGACTGGCAACTCTGGCCTTaGCGGTGTTTTGTTCTTGTT | + |
Preference number: 3 (lower is better) Translates to: QGAFVLPHSNETTDGERDWQLWP*RCFVLV Trigger: AACAAGAACAAAACACCGCAAAGGCCAGAGTTGCCA...GTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCAGAACAAAGGCCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CAA 90 bp | ATGCTCAAGAGGACAGCCTATGCCACATTTATGCCAGGCTTGCCCTTTCAAATCCATTTCCTTCGGACATaGGCTGCTGCCATGGCAACT | + |
Preference number: 3 (lower is better) Translates to: MLKRTAYATFMPGLPFQIHFLRT*AAAMAT Trigger: AGTTGCCATGGCAGCAGCCAATGTCCGAAGGAAATG...GATTTGAAAGGGCAAGCCTGGCATAAATGTGGCATAGGCTGTCCTCTTGAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CAA 90 bp | TATCTCAGTGCGCCCTGCTCCAAGAGAGATCAGGAGCAGATCACAAAGACCTCAAATATGAGGCCTCTGTaGATCTTGGGTGCTCTAGGT | + |
Preference number: 3 (lower is better) Translates to: YLSAPCSKRDQEQITKTSNMRPL*ILGALG Trigger: ACCTAGAGCACCCAAGATCAACAGAGGCCTCATATT...TGAGGTCTTTGTGATCTGCTCCTGATCTCTCTTGGAGCAGGGCGCACTGAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR TCA 72 bp | AGAGGACCAAGGGGCCTTTGTTCTGCCACATTCAAATaGAACCACAGATGGCGAGAGGGACAAACAGCAATG | + |
Preference number: 3 (lower is better) Translates to: RGPRGLCSATFK*NHRWREGQTAM Trigger: CATTGCTGTTTGTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCAGAACAAAGGCCCCTTGGTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR TCA 72 bp | ATTCTCAGGCCAATTCCCACAGCCAACAAAGGACTCTaGAGCAAGCAAGCACCATCATGGTATCTCAGTGCG | + |
Preference number: 3 (lower is better) Translates to: ILRPIPTANKGL*SKQAPSWYLSA Trigger: CGCACTGAGATACCATGATGGTGCTTGCTTGCTTCAGAGTCCTTTGTTGGCTGTGGGAATTGGCCTGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR TCA 72 bp | CTAGACACCCAGTCCTCTTGGGAGCAAAGGACACGTTaGGGTTATTTCTTGAAAAACCTGCTCCCTCCAGAG | + |
Preference number: 3 (lower is better) Translates to: LDTQSSWEQRTR*GYFLKNLLPPE Trigger: CTCTGGAGGGAGCAGGTTTTTCAAGAAATAACCTCAACGTGTCCTTTGCTCCCAAGAGGACTGGGTGTCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR GCA 72 bp | AGAGAAGTAAAATGTATTGCCAGGCCCATAGAGCTGTaGACGAGACAGGCCTGCTTGCTACTAGACCCAGAT | + |
Preference number: 3 (lower is better) Translates to: REVKCIARPIEL*TRQACLLLDPD Trigger: ATCTGGGTCTAGTAGCAAGCAGGCCTGTCTCGTGCACAGCTCTATGGGCCTGGCAATACATTTTACTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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3UTR GCA 72 bp | TTTCAGACACCAAAGAGGACCAAGGGGCCTTTGTTCTaGCACATTCAAATGAAACCACAGATGGCGAGAGGG | + |
Preference number: 3 (lower is better) Translates to: FQTPKRTKGPLF*HIQMKPQMARG Trigger: CCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCAGAACAAAGGCCCCTTGGTCCTCTTTGGTGTCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CCA 72 bp | AATCACACTGAGGTTTGCATTGGCAAACCATTTCTTTaGGCTTTCCCATGGGATGCAGGAGTGGAGGCTGCA | + |
Preference number: 3 (lower is better) Translates to: NHTEVCIGKPFL*AFPWDAGVEAA Trigger: TGCAGCCTCCACTCCTGCATCCCATGGGAAAGCCCAAAGAAATGGTTTGCCAATGCAAACCTCAGTGTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR TCA 72 bp | CCTCTTGGGAGCAAAGGACACGTTGAGGTTATTTCTTaGAAAACCTGCTCCCTCCAGAGGCATCAAGCAACT | + |
Preference number: 3 (lower is better) Translates to: PLGSKGHVEVIS*KTCSLQRHQAT Trigger: AGTTGCTTGATGCCTCTGGAGGGAGCAGGTTTTTCAAGAAATAACCTCAACGTGTCCTTTGCTCCCAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CCA 72 bp | GAGAAGTTATGTAAGCCTCTTGGACTGCGGCCACCATaGAGACAGACATCCGTTTGCTTTGTTTTCCATTGG | + |
Preference number: 3 (lower is better) Translates to: EKLCKPLGLRPP*RQTSVCFVFHW Trigger: CCAATGGAAAACAAAGCAAACGGATGTCTGTCTCCATGGTGGCCGCAGTCCAAGAGGCTTACATAACTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CAA 90 bp | CCCACCAAATTCTCAGGCCAATTCCCACAGCCAACAAAGGACTCTGAAGCAAGCTGCAACCATAAGATGTaGGATTCTCTTATCACGTTG | + |
Preference number: 3 (lower is better) Translates to: PTKFSGQFPQPTKDSEASCNHKM*DSLITL Trigger: CAACGTGATAAGAGAATCCAACATCTTATGGTTGCA...GCTTGCTTCAGAGTCCTTTGTTGGCTGTGGGAATTGGCCTGAGAATTTGGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR GCA 72 bp | ACTAGACCCAGATCATACATACAGACCCCAACCTACTaGACTATTTCCCTCCTTAGTCCCGTAGCTTCTAAG | + |
Preference number: 3 (lower is better) Translates to: TRPRSYIQTPTY*TISLLSPVASK Trigger: CTTAGAAGCTACGGGACTAAGGAGGGAAATAGTGCAGTAGGTTGGGGTCTGTATGTATGATCTGGGTCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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3UTR-3UTR CAA 90 bp | CCCACCAAATTCTCAGGCCAATTCCCACAGCCAACAAAGGACTCTGAAGCAAGCTCCCACAATGGCATTTaGAAGTATGCATTTAACAAG | + |
Preference number: 3 (lower is better) Translates to: PTKFSGQFPQPTKDSEASSHNGI*KYAFNK Trigger: CTTGTTAAATGCATACTTCAAAATGCCATTGTGGGA...GCTTGCTTCAGAGTCCTTTGTTGGCTGTGGGAATTGGCCTGAGAATTTGGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CAA 90 bp | TGCCACATTCAAATGAAACCACAGATGGCGAGAGGGACAAACAGCAATGATTACGACCAAACGCCACTTTaGTTTGTTAGACGCGTCTTG | + |
Preference number: 3 (lower is better) Translates to: CHIQMKPQMARGTNSNDYDQTPL*FVRRVL Trigger: CAAGACGCGTCTAACAAACAAAAGTGGCGTTTGGTC...GTAATCATTGCTGTTTGTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CAA 90 bp | GTGACGACTTTGATCTCACTCCTGTTGTGGATACCTGTTTCCCGAGGACTTACTTTTGACATATTTCTGTaGTCCATCTCAAGTGCTCCC | + |
Preference number: 3 (lower is better) Translates to: VTTLISLLLWIPVSRGLTFDIFL*SISSAP Trigger: GGGAGCACTTGAGATGGACAACAGAAATATGTCAAA...AGTAAGTCCTCGGGAAACAGGTATCCACAACAGGAGTGAGATCAAAGTCGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CCA 72 bp | TATGCCACATTTATGCCAGGCTTGCCCTTTCAAATCTaGGATCCCCTTGGAATGCTAGGAGGTAATGTCTTA | + |
Preference number: 3 (lower is better) Translates to: YATFMPGLPFQI*DPLGMLGGNVL Trigger: TAAGACATTACCTCCTAGCATTCCAAGGGGATCCCAGATTTGAAAGGGCAAGCCTGGCATAAATGTGGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CAA 90 bp | GTGACGACTTTGATCTCACTCCTGTTGTGGATACCTGTTTCCCGAGGACTTACTTTGCTTTGTTTTCCATaGGCAACATTGGGAAGTGAT | + |
Preference number: 3 (lower is better) Translates to: VTTLISLLLWIPVSRGLTLLCFP*ATLGSD Trigger: ATCACTTCCCAATGTTGCCAATGGAAAACAAAGCAA...AGTAAGTCCTCGGGAAACAGGTATCCACAACAGGAGTGAGATCAAAGTCGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CAA 90 bp | GTGACGACTTTGATCTCACTCCTGTTGTGGATACCTGTTTCCCGAGGACTTACTAGCAATATAAATCCCTaGGAATCAGCTTTCAGGGTA | + |
Preference number: 3 (lower is better) Translates to: VTTLISLLLWIPVSRGLTSNINP*ESAFRV Trigger: TACCCTGAAAGCTGATTCCAAGGGATTTATATTGCT...AGTAAGTCCTCGGGAAACAGGTATCCACAACAGGAGTGAGATCAAAGTCGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CAA 90 bp | CTCATCAGACATGAGGTTGGCTCTCTTTTTACCCTGTTATCATCAGGCGATCAAACATTTATGCCAGGCTaGCCCTTTCAAATCTGGGAT | + |
Preference number: 3 (lower is better) Translates to: LIRHEVGSLFTLLSSGDQTFMPG*PFQIWD Trigger: ATCCCAGATTTGAAAGGGCAAGCCTGGCATAAATGT...TTGATCGCCTGATGATAACAGGGTAAAAAGAGAGCCAACCTCATGTCTGATGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR TCA 72 bp | CAAATGGGTTGTTCATGCTCCCTTCCTCTTTCCTTCTaGAGTAACACACGCAGAAGAGGAGATATAAGTAGT | + |
Preference number: 3 (lower is better) Translates to: QMGCSCSLPLSF*SNTRRRGDISS Trigger: ACTACTTATATCTCCTCTTCTGCGTGTGTTACTTCAGAAGGAAAGAGGAAGGGAGCATGAACAACCCATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR GCA 72 bp | TCACTCAGAACCGTGAAAATTAATCACACTGAGGTTTaGATTGGCAAACCATTTCTTTGGGCTTTCCCATGG | + |
Preference number: 3 (lower is better) Translates to: SLRTVKINHTEV*IGKPFLWAFPW Trigger: CCATGGGAAAGCCCAAAGAAATGGTTTGCCAATGCAAACCTCAGTGTGATTAATTTTCACGGTTCTGAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CAA 90 bp | CTCATCAGACATGAGGTTGGCTCTCTTTTTACCCTGTTATCATCAGGCGATCAACTTAGTAATGACAATTaGAGAGTAAGAGCAGCTCCA | + |
Preference number: 3 (lower is better) Translates to: LIRHEVGSLFTLLSSGDQLSNDN*RVRAAP Trigger: TGGAGCTGCTCTTACTCTCAAATTGTCATTACTAAG...TTGATCGCCTGATGATAACAGGGTAAAAAGAGAGCCAACCTCATGTCTGATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR TCA 72 bp | AGTGAGATGGAAGAAATCAAATTGTCTGAGCTTGAGTaGGCAAATGCATGCTGGGAAGCAAAAAGGAAACAA | + |
Preference number: 3 (lower is better) Translates to: SEMEEIKLSELE*ANACWEAKRKQ Trigger: TTGTTTCCTTTTTGCTTCCCAGCATGCATTTGCTCACTCAAGCTCAGACAATTTGATTTCTTCCATCTCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR-3UTR CAA 90 bp | AGTTTTCATGAATTTATTTCAGCCAAGTCTTTCTTAAGTTCCACCTGGGCAATACAAGTGCCAAGGATCTaGAAGGTTGCTGTCATATGT | + |
Preference number: 3 (lower is better) Translates to: SFHEFISAKSFLSSTWAIQVPRI*KVAVIC Trigger: ACATATGACAGCAACCTTCAAGATCCTTGGCACTTG...TATTGCCCAGGTGGAACTTAAGAAAGACTTGGCTGAAATAAATTCATGAAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR TCA 72 bp | AAGAGAGGAGATTTAAGTGTTAAAAACAAGAAACCCTaGAGCTCAGGCATTAGTCATGAGACACCACATTTC | + |
Preference number: 3 (lower is better) Translates to: KRGDLSVKNKKP*SSGISHETPHF Trigger: GAAATGTGGTGTCTCATGACTAATGCCTGAGCTTCAGGGTTTCTTGTTTTTAACACTTAAATCTCCTCTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS-3UTR GCA 90 bp | GGATACCTGTTTCCCGAGGACTTACTGGAAAATGCAGAACACCTGAAGAATACAAGCTGGTGTCACGGCTaGCGCCGCCGCCACCCCTCC | + |
Preference number: 4 (lower is better) Translates to: GYLFPEDLLENAEHLKNTSWCHG*RRRHPS Trigger: GGAGGGGTGGCGGCGGCGGCAGCCGTGACACCAGCT...TGTATTCTTCAGGTGTTCTGCATTTTCCAGTAAGTCCTCGGGAAACAGGTATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS-3UTR TCA 90 bp | CAAGGGGCCTTTGTTCTGCCACATTCAAATGAAACCACAGATGGCGAGAGGGACCCACCTTCACCGAGCTaGGGGAAGCCTTCTTGGCCA | + |
Preference number: 4 (lower is better) Translates to: QGAFVLPHSNETTDGERDPPSPS*GKPSWP Trigger: TGGCCAAGAAGGCTTCCCTCAGCTCGGTGAAGGTGG...GTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCAGAACAAAGGCCCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS-3UTR GCA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTAGCTGGTGTCACGGCTaGCGCCGCCGCCACCCCTCC | + |
Preference number: 4 (lower is better) Translates to: FSASSTTCVRNDILFVPSSWCHG*RRRHPS Trigger: GGAGGGGTGGCGGCGGCGGCAGCCGTGACACCAGCT...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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CDS-3UTR CCA 90 bp | CCCACCAAATTCTCAGGCCAATTCCCACAGCCAACAAAGGACTCTGAAGCAAGCAGCTCTTCTCGCAGATaGTGGCTTCCACTGGGAGCA | + |
Preference number: 4 (lower is better) Translates to: PTKFSGQFPQPTKDSEASSSSRR*WLPLGA Trigger: TGCTCCCAGTGGAAGCCACCATCTGCGAGAAGAGCT...GCTTGCTTCAGAGTCCTTTGTTGGCTGTGGGAATTGGCCTGAGAATTTGGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CAA 72 bp | GCTCCCTCCAGAGGCATCAAGCAACTGCCTCTGCAGTaGAGGAAGAATGGAGGAGGACGTGTCATAAACCTA | + |
Preference number: 4 (lower is better) Translates to: APSRGIKQLPLQ*RKNGGGRVINL Trigger: TAGGTTTATGACACGTCCTCCTCCATTCTTCCTCAACTGCAGAGGCAGTTGCTTGATGCCTCTGGAGGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS-3UTR GCA 90 bp | AGATTAGGCACTGGTGGCTACCCCTCTTATACCTCAGTAGCCTGTTTTCCTTCTTCAAGGCATGTCTGCTaGCAGGTCTCCTCCAGGGAT | + |
Preference number: 4 (lower is better) Translates to: RLGTGGYPSYTSVACFPSSRHVC*QVSSRD Trigger: ATCCCTGGAGGAGACCTGGCAGCAGACATGCCTTGA...AGAAGGAAAACAGGCTACTGAGGTATAAGAGGGGTAGCCACCAGTGCCTAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS-3UTR GCA 90 bp | AGATTAGGCACTGGTGGCTACCCCTCTTATACCTCAGTAGCCTGTTTTCCTTCTCTGTCCACTCTTAACTaGTCCAGCTGGTGTCACGGC | + |
Preference number: 4 (lower is better) Translates to: RLGTGGYPSYTSVACFPSLSTLN*SSWCHG Trigger: GCCGTGACACCAGCTGGAGCAGTTAAGAGTGGACAG...AGAAGGAAAACAGGCTACTGAGGTATAAGAGGGGTAGCCACCAGTGCCTAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS-3UTR TCA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTCCACCTTCACCGAGCTaGGGGAAGCCTTCTTGGCCA | + |
Preference number: 4 (lower is better) Translates to: FSASSTTCVRNDILFVPSPPSPS*GKPSWP Trigger: TGGCCAAGAAGGCTTCCCTCAGCTCGGTGAAGGTGG...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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CDS-3UTR CCA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTGTCACTGCGTTGAGCTaGGCCTGGTTGACGGCTGTG | + |
Preference number: 4 (lower is better) Translates to: FSASSTTCVRNDILFVPSVTALS*AWLTAV Trigger: CACAGCCGTCAACCAGGCCCAGCTCAACGCAGTGAC...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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3UTR CAA 72 bp | CTCAAGAGGACAGCCTATGCCACATTTATGCCAGGCTaGCCCTTTCAAATCTGGGATCCCCTTGGAATGCTA | + |
Preference number: 4 (lower is better) Translates to: LKRTAYATFMPG*PFQIWDPLGML Trigger: TAGCATTCCAAGGGGATCCCAGATTTGAAAGGGCAAGCCTGGCATAAATGTGGCATAGGCTGTCCTCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CAA 72 bp | ACACACACCACCCTCATTATTCTGACGTGGGGTCCTTaGTATGGCAGTAGACAGAAGCTGGGGTCAAAGCAA | + |
Preference number: 4 (lower is better) Translates to: THTTLIILTWGP*YGSRQKLGSKQ Trigger: TTGCTTTGACCCCAGCTTCTGTCTACTGCCATACAAAGGACCCCACGTCAGAATAATGAGGGTGGTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS-3UTR GCA 90 bp | GGATACCTGTTTCCCGAGGACTTACTGGAAAATGCAGAACACCTGAAGAATACAAACTCAAGGCATGTCTaGTGCCAGGTCTCCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: GYLFPEDLLENAEHLKNTNSRHV*CQVSSR Trigger: CCTGGAGGAGACCTGGCAGCAGACATGCCTTGAGTT...TGTATTCTTCAGGTGTTCTGCATTTTCCAGTAAGTCCTCGGGAAACAGGTATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CAA 72 bp | TCTTATCACGTTGCACTGAGAAGTTATGTAAGCCTCTaGGACTGCGGCCACCATGGAGACAGACATCCGTTT | + |
Preference number: 4 (lower is better) Translates to: SYHVALRSYVSL*DCGHHGDRHPF Trigger: AAACGGATGTCTGTCTCCATGGTGGCCGCAGTCCAAGAGGCTTACATAACTTCTCAGTGCAACGTGATAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CAA 72 bp | TCTAGACACCCAGTCCTCTTGGGAGCAAAGGACACGTaGAGGTTATTTCTTGAAAAACCTGCTCCCTCCAGA | + |
Preference number: 4 (lower is better) Translates to: SRHPVLLGAKDT*RLFLEKPAPSR Trigger: TCTGGAGGGAGCAGGTTTTTCAAGAAATAACCTCAACGTGTCCTTTGCTCCCAAGAGGACTGGGTGTCTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS-3UTR GCA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTTCAAGGCATGTCTGCTaGCAGGTCTCCTCCAGGGAT | + |
Preference number: 4 (lower is better) Translates to: FSASSTTCVRNDILFVPSSRHVC*QVSSRD Trigger: ATCCCTGGAGGAGACCTGGCAGCAGACATGCCTTGA...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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CDS-3UTR GCA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTAACTCAAGGCATGTCTaGTGCCAGGTCTCCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: FSASSTTCVRNDILFVPSNSRHV*CQVSSR Trigger: CCTGGAGGAGACCTGGCAGCAGACATGCCTTGAGTT...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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CDS-3UTR GCA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTGGAAGCTCTCCTCAATaGATGGGGGAGGAGAAGCGT | + |
Preference number: 4 (lower is better) Translates to: FSASSTTCVRNDILFVPSGSSPQ*MGEEKR Trigger: ACGCTTCTCCTCCCCCATGCATTGAGGAGAGCTTCC...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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CDS-3UTR GCA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTCTGTCCACTCTTAACTaGTCCAGCTGGTGTCACGGC | + |
Preference number: 4 (lower is better) Translates to: FSASSTTCVRNDILFVPSLSTLN*SSWCHG Trigger: GCCGTGACACCAGCTGGAGCAGTTAAGAGTGGACAG...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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CDS-3UTR GCA 90 bp | CCCACCAAATTCTCAGGCCAATTCCCACAGCCAACAAAGGACTCTGAAGCAAGCACACTTAAAGGGCTTTaGACCTGTGTGTTTCCTGTA | + |
Preference number: 4 (lower is better) Translates to: PTKFSGQFPQPTKDSEASTLKGL*TCVFPV Trigger: TACAGGAAACACACAGGTGCAAAGCCCTTTAAGTGT...GCTTGCTTCAGAGTCCTTTGTTGGCTGTGGGAATTGGCCTGAGAATTTGGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS-3UTR CCA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTAGCTCTTCTCGCAGATaGTGGCTTCCACTGGGAGCA | + |
Preference number: 4 (lower is better) Translates to: FSASSTTCVRNDILFVPSSSSRR*WLPLGA Trigger: TGCTCCCAGTGGAAGCCACCATCTGCGAGAAGAGCT...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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CDS-3UTR GCA 90 bp | GGATACCTGTTTCCCGAGGACTTACTGGAAAATGCAGAACACCTGAAGAATACAGAGCAAAATGTCCACTaGGGAGCTCTTCTCGCAGAT | + |
Preference number: 4 (lower is better) Translates to: GYLFPEDLLENAEHLKNTEQNVH*GALLAD Trigger: ATCTGCGAGAAGAGCTCCGCAGTGGACATTTTGCTC...TGTATTCTTCAGGTGTTCTGCATTTTCCAGTAAGTCCTCGGGAAACAGGTATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS-3UTR GCA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTGAGCAAAATGTCCACTaGGGAGCTCTTCTCGCAGAT | + |
Preference number: 4 (lower is better) Translates to: FSASSTTCVRNDILFVPSEQNVH*GALLAD Trigger: ATCTGCGAGAAGAGCTCCGCAGTGGACATTTTGCTC...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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CDS-3UTR CCA 90 bp | AGTTTTCATGAATTTATTTCAGCCAAGTCTTTCTTAAGTTCCACCTGGGCAATAGTCACTGCGTTGAGCTaGGCCTGGTTGACGGCTGTG | + |
Preference number: 4 (lower is better) Translates to: SFHEFISAKSFLSSTWAIVTALS*AWLTAV Trigger: CACAGCCGTCAACCAGGCCCAGCTCAACGCAGTGAC...TATTGCCCAGGTGGAACTTAAGAAAGACTTGGCTGAAATAAATTCATGAAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS-3UTR CCA 90 bp | GACACCAAAGAGGACCAAGGGGCCTTTGTTCTGCCACATTCAAATGAAACCACAAAACACCTGTCGCAGTaGTTACACTTAAAGGGCTTT | + |
Preference number: 4 (lower is better) Translates to: DTKEDQGAFVLPHSNETTKHLSQ*LHLKGF Trigger: AAAGCCCTTTAAGTGTAACCACTGCGACAGGTGTTT...TGTGGTTTCATTTGAATGTGGCAGAACAAAGGCCCCTTGGTCCTCTTTGGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS-3UTR CCA 90 bp | TGCCACATTCAAATGAAACCACAGATGGCGAGAGGGACAAACAGCAATGATTACATATGGAGCGCAAGATaGTCAGACCTGGAGAAACAC | + |
Preference number: 4 (lower is better) Translates to: CHIQMKPQMARGTNSNDYIWSAR*SDLEKH Trigger: GTGTTTCTCCAGGTCTGACCATCTTGCGCTCCATAT...GTAATCATTGCTGTTTGTCCCTCTCGCCATCTGTGGTTTCATTTGAATGTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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3UTR CAA 72 bp | CAACCTTCCCTCATGACCACAGAGAGGGAGCCCTATTaGAAAAAGAGTATCTTGTTTGGGATATTTGCTAAG | + |
Preference number: 4 (lower is better) Translates to: QPSLMTTEREPY*KKSILFGIFAK Trigger: CTTAGCAAATATCCCAAACAAGATACTCTTTTTCAAATAGGGCTCCCTCTCTGTGGTCATGAGGGAAGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS-3UTR GCA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTACACTTAAAGGGCTTTaGACCTGTGTGTTTCCTGTA | + |
Preference number: 4 (lower is better) Translates to: FSASSTTCVRNDILFVPSTLKGL*TCVFPV Trigger: TACAGGAAACACACAGGTGCAAAGCCCTTTAAGTGT...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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3UTR CAA 72 bp | TTTGTTTTCCCTTGGATGCAAATAGACACAGATCATTaGGAAGCATATCCCAAATTCAAGTCCCTAAATACA | + |
Preference number: 4 (lower is better) Translates to: FVFPWMQIDTDH*EAYPKFKSLNT Trigger: TGTATTTAGGGACTTGAATTTGGGATATGCTTCCAAATGATCTGTGTCTATTTGCATCCAAGGGAAAACAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS CCA 90 bp | CCCGAGAGAGCAAAATGTCCACTGCGGAGCTCTTCTCGCAGATGGTaGCTTCCACTGGGAGCAGCAAGGGGTCTAGGCGCCGGAAGCTCT | + |
Preference number: 5 (lower is better) Translates to: PERAKCPLRSSSRRW*LPLGAARGLGAGSS Trigger: AGAGCTTCCGGCGCCTAGACCCCTTGCTGCTCCCAGTGGAAGCCACCATCTGCGAGAAGAGCTCCGCAGTGGACATTTTGCTCTCTCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055001.10 ENSMUST00000114086.8 ENSMUST00000135075.2 |
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CDS CCA 90 bp | TGTCCCGAGAGAGCAAAATGTCCACTGCGGAGCTCTTCTCGCAGATaGTGGCTTCCACTGGGAGCAGCAAGGGGTCTAGGCGCCGGAAGC | + |
Preference number: 5 (lower is better) Translates to: CPERAKCPLRSSSRR*WLPLGAARGLGAGS Trigger: GCTTCCGGCGCCTAGACCCCTTGCTGCTCCCAGTGGAAGCCACCATCTGCGAGAAGAGCTCCGCAGTGGACATTTTGCTCTCTCGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055001.10 ENSMUST00000114086.8 ENSMUST00000135075.2 |
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CDS-3UTR CAA 90 bp | CCATCTGATTGGCTGCTTCGAGAGCTAGACATCCAGGTGCCGAGAGAGTCCTGGAATGAGGTCACTGCGTaGAGCTGGGCCTGGTTGACG | + |
Preference number: 5 (lower is better) Translates to: PSDWLLRELDIQVPRESWNEVTA*SWAWLT Trigger: CGTCAACCAGGCCCAGCTCAACGCAGTGACCTCATT...CCAGGACTCTCTCGGCACCTGGATGTCTAGCTCTCGAAGCAGCCAATCAGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS-3UTR CAA 90 bp | GACACCAAAGAGGACCAAGGGGCCTTTGTTCTGCCACATTCAAATGAAACCACAAGAGTCTGTGAGGTTTaGACCAGATGGCGGCTGAGC | + |
Preference number: 5 (lower is better) Translates to: DTKEDQGAFVLPHSNETTRVCEV*TRWRLS Trigger: GCTCAGCCGCCATCTGGTCAAAACCTCACAGACTCT...TGTGGTTTCATTTGAATGTGGCAGAACAAAGGCCCCTTGGTCCTCTTTGGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114086.8 |
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CDS-3UTR CAA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTAATGAGGTCACTGCGTaGAGCTGGGCCTGGTTGACG | + |
Preference number: 5 (lower is better) Translates to: FSASSTTCVRNDILFVPSNEVTA*SWAWLT Trigger: CGTCAACCAGGCCCAGCTCAACGCAGTGACCTCATT...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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CDS-3UTR CAA 90 bp | TTCTCTGCCTCATCAACTACCTGTGTGAGGAATGACATCTTGTTTGTACCTAGTAGAGTCTGTGAGGTTTaGACCAGATGGCGGCTGAGC | + |
Preference number: 5 (lower is better) Translates to: FSASSTTCVRNDILFVPSRVCEV*TRWRLS Trigger: GCTCAGCCGCCATCTGGTCAAAACCTCACAGACTCT...ACTAGGTACAAACAAGATGTCATTCCTCACACAGGTAGTTGATGAGGCAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055001.10 |
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CDS CCA 72 bp | GCAAAATGTCCACTGCGGAGCTCTTCTCGCAGATGGTaGCTTCCACTGGGAGCAGCAAGGGGTCTAGGCGCC | + |
Preference number: 6 (lower is better) Translates to: AKCPLRSSSRRW*LPLGAARGLGA Trigger: GGCGCCTAGACCCCTTGCTGCTCCCAGTGGAAGCCACCATCTGCGAGAAGAGCTCCGCAGTGGACATTTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055001.10 ENSMUST00000114086.8 ENSMUST00000135075.2 |
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CDS CCA 72 bp | AGAGCAAAATGTCCACTGCGGAGCTCTTCTCGCAGATaGTGGCTTCCACTGGGAGCAGCAAGGGGTCTAGGC | + |
Preference number: 6 (lower is better) Translates to: RAKCPLRSSSRR*WLPLGAARGLG Trigger: GCCTAGACCCCTTGCTGCTCCCAGTGGAAGCCACCATCTGCGAGAAGAGCTCCGCAGTGGACATTTTGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055001.10 ENSMUST00000114086.8 ENSMUST00000135075.2 |