Pregenerated sensors for KLF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000078Ensembl transcript IDs: ENSMUST00000000080.8, ENSMUST00000222857.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGCAGCCATTAAAGTGGCACCGATGTACCCGTCTTCTGCCATCTaGGGAGGCGTCGCCATTACCCTTGTCACCAGACTTCCCAGAGGT | + |
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Preference number: 1 (lower is better) Translates to: PAAIKVAPMYPSSAI*GGVAITLVTRLPRG Trigger: ACCTCTGGGAAGTCTGGTGACAAGGGTAATGGCGACGCCTCCCCAGATGGCAGAAGACGGGTACATCGGTGCCACTTTAATGGCTGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
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| 3UTR TCA 90 bp | CACGGCCAAAAGCTTAGAGCCTCTCAGAAGGTTAGGAACCAGTGGTaGGTCCGGGGTCACCCAAACACCATGCACCATGGGTGCTATGCC | + |
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Preference number: 1 (lower is better) Translates to: HGQKLRASQKVRNQW*VRGHPNTMHHGCYA Trigger: GGCATAGCACCCATGGTGCATGGTGTTTGGGTGACCCCGGACTCACCACTGGTTCCTAACCTTCTGAGAGGCTCTAAGCTTTTGGCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR TCA 90 bp | ACCTTCCCAGGTGAGGGCAGGTCTCCTGGCCCACAGCCCCATAGTTaGGAAGATTCCCTGTTCACTTCTGGAGAAGATGGAGGTGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: TFPGEGRSPGPQPHS*EDSLFTSGEDGGVE Trigger: TTCCACACCTCCATCTTCTCCAGAAGTGAACAGGGAATCTTCTCAACTATGGGGCTGTGGGCCAGGAGACCTGCCCTCACCTGGGAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
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| 3UTR TCA 90 bp | GCACCCAGCCCCAGCCAGTCCAGCAACGTCGCTGTGTTTCATAAGTaGGACGCGCCAGCACAAGTTTCCTCTCTCTTCTGTTTACCTTCT | + |
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Preference number: 1 (lower is better) Translates to: APSPSQSSNVAVFHK*DAPAQVSSLFCLPS Trigger: AGAAGGTAAACAGAAGAGAGAGGAAACTTGTGCTGGCGCGTCTCACTTATGAAACACAGCGACGTTGCTGGACTGGCTGGGGCTGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR GCA 90 bp | CAAAGAGAGGCCCCTGGAGGTAACTGGATAGGAAGCAAAATGGCATaGTTTGGCTGTTACAGGCATCCCTCCTTCCATGGCCGCCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: QREAPGGNWIGSKMA*FGCYRHPSFHGRLL Trigger: TAAGAGGCGGCCATGGAAGGAGGGATGCCTGTAACAGCCAAAGCATGCCATTTTGCTTCCTATCCAGTTACCTCCAGGGGCCTCTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR TCA 90 bp | TTTGGTCCACAGGTCTTCCTGGCTGTCAAATTTTATCTCAGAGGCTaGCACGTAGCAGGGCTCACTCTGAAGATAGCGTTCCAACTCCAG | + |
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Preference number: 1 (lower is better) Translates to: FGPQVFLAVKFYLRG*HVAGLTLKIAFQLQ Trigger: CTGGAGTTGGAACGCTATCTTCAGAGTGAGCCCTGCTACGTGTCAGCCTCTGAGATAAAATTTGACAGCCAGGAAGACCTGTGGACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
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| 3UTR TCA 90 bp | CGGTGTGTGTGTGTGTGTATGTGTGTGTGGGTGTGTGTGGGTATGTaGGATCTGTACAGTTGTGCAAGGTCTCTTAAAAGAGTCTCATGG | + |
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Preference number: 1 (lower is better) Translates to: RCVCVCMCVWVCVGM*DLYSCARSLKRVSW Trigger: CCATGAGACTCTTTTAAGAGACCTTGCACAACTGTACAGATCTCACATACCCACACACACCCACACACACATACACACACACACACACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR GCA 90 bp | GTAGCCAGTAAAACAAGCTACTTGACACACTGCACATTCTATAGCTaGACCAGACACCAGAAAGTCCTTTCACACAGGAAAGGGGCACAG | + |
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Preference number: 1 (lower is better) Translates to: VASKTSYLTHCTFYS*TRHQKVLSHRKGAQ Trigger: CTGTGCCCCTTTCCTGTGTGAAAGGACTTTCTGGTGTCTGGTGCAGCTATAGAATGTGCAGTGTGTCAAGTAGCTTGTTTTACTGGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR GCA 90 bp | ACAAATGAGCTCCATGTAGCCAGTAAAACAAGCTACTTGACACACTaGACATTCTATAGCTGCACCAGACACCAGAAAGTCCTTTCACAC | + |
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Preference number: 1 (lower is better) Translates to: TNELHVASKTSYLTH*TFYSCTRHQKVLSH Trigger: GTGTGAAAGGACTTTCTGGTGTCTGGTGCAGCTATAGAATGTGCAGTGTGTCAAGTAGCTTGTTTTACTGGCTACATGGAGCTCATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR GCA 90 bp | CAGCTGGATGAAATATCAGAAATATCAGCTGTCTACGCTGTGGTATaGCAAATTCCGGGAAAGTACTCCTTGAAAAAGCTGGAAGAATCT | + |
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Preference number: 1 (lower is better) Translates to: QLDEISEISAVYAVV*QIPGKYSLKKLEES Trigger: AGATTCTTCCAGCTTTTTCAAGGAGTACTTTCCCGGAATTTGGCATACCACAGCGTAGACAGCTGATATTTCTGATATTTCATCCAGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR CCA 90 bp | CATGTTGACATGTCAAAGGACTTTTCACCCGTTCGTTCATCACTGTaGAGGATCTTAAAGAGGTGTTCTTTTTGTTGTCGTTGTTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: HVDMSKDFSPVRSSL*RILKRCSFCCRCCS Trigger: AGAACAACAACGACAACAAAAAGAACACCTCTTTAAGATCCTCCACAGTGATGAACGAACGGGTGAAAAGTCCTTTGACATGTCAACATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR TCA 90 bp | TCTCATATATGTAAAGATCCACACCCAAAAAGCCAAGCAGCTGGATaGAATATCAGAAATATCAGCTGTCTACGCTGTGGTATGCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: SHICKDPHPKSQAAG*NIRNISCLRCGMPN Trigger: ATTTGGCATACCACAGCGTAGACAGCTGATATTTCTGATATTTCATCCAGCTGCTTGGCTTTTTGGGTGTGGATCTTTACATATATGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCGGGGTCACCCAAACACCATGCACCATGGGTGCTATGCCACTCCTGACATGGGCCGCCTCTTAGCCTaGAAGCCTCTTTTAGCCTAC | + |
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Preference number: 2 (lower is better) Translates to: VRGHPNTMHHGCYATPDMGRLLA*KPLLAY Trigger: GTAGGCTAAAAGAGGCTTCCAGGCTAAGAGGCGGCC...CATGTCAGGAGTGGCATAGCACCCATGGTGCATGGTGTTTGGGTGACCCCGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR CCA 90 bp | GATGTACCCGTCTTCTGCCATCTGGGGAGGCGTCGCCATTACCCTTGTCACCAGGATCAGAGAGTCCTCTaGGGGACTAGAAGAAATCTT | + |
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Preference number: 2 (lower is better) Translates to: DVPVFCHLGRRRHYPCHQDQRVL*GTRRNL Trigger: AAGATTTCTTCTAGTCCCCCAGAGGACTCTCTGATC...CTGGTGACAAGGGTAATGGCGACGCCTCCCCAGATGGCAGAAGACGGGTACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
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| 3UTR-3UTR TCA 90 bp | TACCCGTCTTCTGCCATCTGGGGAGGCGTCGCCATTACCCTTGTCACCAGACTTAGAAATCTTCAGTTCTaGTTCCTCCTTCTTCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: YPSSAIWGGVAITLVTRLRNLQF*FLLLLP Trigger: GGGGAGAAGAAGGAGGAATCAGAACTGAAGATTTCT...AAGTCTGGTGACAAGGGTAATGGCGACGCCTCCCCAGATGGCAGAAGACGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCACCCACTAACATTCTCAGTGCGCATGCTCACGGCCAAAAGCTTAGAGCCTGCCCCTGGAGGTAACTaGATAGGAAGCAAAATGGCA | + |
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Preference number: 2 (lower is better) Translates to: SHPLTFSVRMLTAKSLEPAPGGN*IGSKMA Trigger: TGCCATTTTGCTTCCTATCCAGTTACCTCCAGGGGC...AGGCTCTAAGCTTTTGGCCGTGAGCATGCGCACTGAGAATGTTAGTGGGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR TCA 90 bp | TATCAGAAATATCAGCTGTCTACGCTGTGGTATGCCAAATTCCGGGAAAGTACTCACCACAATGGGTCCTaGGTTCCCGCTCCCACCCTC | + |
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Preference number: 2 (lower is better) Translates to: YQKYQLSTLWYAKFRESTHHNGS*VPAPTL Trigger: GAGGGTGGGAGCGGGAACTCAGGACCCATTGTGGTG...AGTACTTTCCCGGAATTTGGCATACCACAGCGTAGACAGCTGATATTTCTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCACCCACTAACATTCTCAGTGCGCATGCTCACGGCCAAAAGCTTAGAGCCTCAAAATGGCATGCTTTaGCTGTTACAGGCATCCCTC | + |
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Preference number: 2 (lower is better) Translates to: SHPLTFSVRMLTAKSLEPQNGML*LLQASL Trigger: GAGGGATGCCTGTAACAGCCAAAGCATGCCATTTTG...AGGCTCTAAGCTTTTGGCCGTGAGCATGCGCACTGAGAATGTTAGTGGGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGCAGCCATTAAAGTGGCACCGATGTACCCGTCTTCTGCCATCTGGGGAGGTCCACAGGTCTTCCTaGCTGTCAAATTTTATCTCA | + |
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Preference number: 2 (lower is better) Translates to: FLQPLKWHRCTRLLPSGEVHRSS*LSNFIS Trigger: TGAGATAAAATTTGACAGCCAGGAAGACCTGTGGAC...CTCCCCAGATGGCAGAAGACGGGTACATCGGTGCCACTTTAATGGCTGCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCAAAAAGCCAAGCAGCTGGATGAAATATCAGAAATATCAGCTGTCTACGCTGTTAGGAACCAGTGGTaGGTCCGGGGTCACCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: TQKAKQLDEISEISAVYAVRNQW*VRGHPN Trigger: GTTTGGGTGACCCCGGACTCACCACTGGTTCCTAAC...AGCGTAGACAGCTGATATTTCTGATATTTCATCCAGCTGCTTGGCTTTTTGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR CCA 90 bp | TATCAGAAATATCAGCTGTCTACGCTGTGGTATGCCAAATTCCGGGAAAGTACTGCATCCCTCCTTCCATaGCCGCCTCTTAGCCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: YQKYQLSTLWYAKFRESTASLLP*PPLSLE Trigger: TTCCAGGCTAAGAGGCGGCCATGGAAGGAGGGATGC...AGTACTTTCCCGGAATTTGGCATACCACAGCGTAGACAGCTGATATTTCTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR CCA 90 bp | GTAAACTTTCCTGCAGCCATTAAAGTGGCACCGATGTACCCGTCTTCTGCCATCTTCCCTGTTCACTTCTaGAGAAGATGGAGGTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: VNFPAAIKVAPMYPSSAIFPVHF*RRWRCG Trigger: TCCACACCTCCATCTTCTCCAGAAGTGAACAGGGAA...GATGGCAGAAGACGGGTACATCGGTGCCACTTTAATGGCTGCAGGAAAGTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCATTTAAAAGGCTTGGCACCGGTATGCTTTCGGAAGTGTCTGGTCAACTCAGTGAGTGCGCTGATGTaGTTTCAAGTGGGAGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: EHLKGLAPVCFRKCLVNSVSALM*FQVGAF Trigger: AAAAGCTCCCACTTGAAAGCACATCAGCGCACTCAC...TGAGTTGACCAGACACTTCCGAAAGCATACCGGTGCCAAGCCTTTTAAATGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
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| 3UTR-3UTR GCA 90 bp | TATCAGAAATATCAGCTGTCTACGCTGTGGTATGCCAAATTCCGGGAAAGTACTGTCACCCAAACACCATaGACCATGGGTGCTATGCCA | + |
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Preference number: 2 (lower is better) Translates to: YQKYQLSTLWYAKFRESTVTQTP*TMGAMP Trigger: TGGCATAGCACCCATGGTGCATGGTGTTTGGGTGAC...AGTACTTTCCCGGAATTTGGCATACCACAGCGTAGACAGCTGATATTTCTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCAAAAAGCCAAGCAGCTGGATGAAATATCAGAAATATCAGCTGTCTACGCTGCAGAATCAGCAGCCTaGAAAAGACTCAACGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: TQKAKQLDEISEISAVYAAESAA*KRLNAN Trigger: GTTGGCGTTGAGTCTTTTCCAGGCTGCTGATTCTGC...AGCGTAGACAGCTGATATTTCTGATATTTCATCCAGCTGCTTGGCTTTTTGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR CAA 90 bp | CAATGGGTTACAAATGAGCTCCATGTAGCCAGTAAAACAAGCTACTaGACACACTGCACATTCTATAGCTGCACCAGACACCAGAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: QWVTNELHVASKTSY*THCTFYSCTRHQKV Trigger: GACTTTCTGGTGTCTGGTGCAGCTATAGAATGTGCAGTGTGTCAAGTAGCTTGTTTTACTGGCTACATGGAGCTCATTTGTAACCCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR CAA 90 bp | TTTCCTGAATTGACTAAGACTTCACCAATGGGATCAGAGGTAAATTaGGTCGTGGGTGAAAGTTCCTCTGAACTGTCCGAAGACTCACTG | + |
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Preference number: 2 (lower is better) Translates to: FPELTKTSPMGSEVN*VVGESSSELSEDSL Trigger: CAGTGAGTCTTCGGACAGTTCAGAGGAACTTTCACCCACGACCAAATTTACCTCTGATCCCATTGGTGAAGTCTTAGTCAATTCAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
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| 3UTR-3UTR CCA 90 bp | TATCAGAAATATCAGCTGTCTACGCTGTGGTATGCCAAATTCCGGGAAAGTACTCTGAGTCCAGCTGGTTaGCCAGTATTTTGTTCATGC | + |
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Preference number: 2 (lower is better) Translates to: YQKYQLSTLWYAKFRESTLSPAG*PVFCSC Trigger: GCATGAACAAAATACTGGCCAACCAGCTGGACTCAG...AGTACTTTCCCGGAATTTGGCATACCACAGCGTAGACAGCTGATATTTCTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCAAAAAGCCAAGCAGCTGGATGAAATATCAGAAATATCAGCTGTCTACGCTCCTTCAGGAAATGATTaGTGGTCAACTCATCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: TQKAKQLDEISEISAVYAPSGND*WSTHPL Trigger: CAAGGGATGAGTTGACCACCAATCATTTCCTGAAGG...AGCGTAGACAGCTGATATTTCTGATATTTCATCCAGCTGCTTGGCTTTTTGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGATCAAACGAAATACCAGCCCAGCCAGACTCATTCTCATATATGTAAAGATTGCACATTCTATAGCTaGACCAGACACCAGAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: EDQTKYQPSQTHSHICKDCTFYS*TRHQKV Trigger: GACTTTCTGGTGTCTGGTGCAGCTATAGAATGTGCA...ATCTTTACATATATGAGAATGAGTCTGGCTGGGCTGGTATTTCGTTTGATCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCAAAAAGCCAAGCAGCTGGATGAAATATCAGAAATATCAGCTGTCTACGCTTCAAGTTGTTGGAAATaGACACATGTTGACATGTCA | + |
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Preference number: 2 (lower is better) Translates to: TQKAKQLDEISEISAVYASSCWK*THVDMS Trigger: TGACATGTCAACATGTGTTCATTTCCAACAACTTGA...AGCGTAGACAGCTGATATTTCTGATATTTCATCCAGCTGCTTGGCTTTTTGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR GCA 90 bp | TTTAACACTGACAGTCAAGTTGTTGGAAATGAACACATGTTGACATGTCAAAGGGGAAGCAAAATGGCATaGTTTGGCTGTTACAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: FNTDSQVVGNEHMLTCQRGSKMA*FGCYRH Trigger: ATGCCTGTAACAGCCAAAGCATGCCATTTTGCTTCC...CCTTTGACATGTCAACATGTGTTCATTTCCAACAACTTGACTGTCAGTGTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR TCA 90 bp | TTTAACACTGACAGTCAAGTTGTTGGAAATGAACACATGTTGACATGTCAAAGGTCTCTTGCAGTTATTTaGTACCACATAGGGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: FNTDSQVVGNEHMLTCQRSLAVI*YHIGGE Trigger: TTCTCCCCCTATGTGGTATCAAATAACTGCAAGAGA...CCTTTGACATGTCAACATGTGTTCATTTCCAACAACTTGACTGTCAGTGTTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR CCA 90 bp | TATCAGAAATATCAGCTGTCTACGCTGTGGTATGCCAAATTCCGGGAAAGTACTATACAGCTTATACAATaGGTTACAAATGAGCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: YQKYQLSTLWYAKFRESTIQLIQ*VTNELH Trigger: ATGGAGCTCATTTGTAACCCATTGTATAAGCTGTAT...AGTACTTTCCCGGAATTTGGCATACCACAGCGTAGACAGCTGATATTTCTGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGATCAAACGAAATACCAGCCCAGCCAGACTCATTCTCATATATGTAAAGATGTCCATATTATACATTaGTACAGTACAATGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: EDQTKYQPSQTHSHICKDVHIIH*YSTMPG Trigger: ACCTGGCATTGTACTGTATCAATGTATAATATGGAC...ATCTTTACATATATGAGAATGAGTCTGGCTGGGCTGGTATTTCGTTTGATCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAACACTGACAGTCAAGTTGTTGGAAATGAACACATGTTGACATGTCAAAGGCTTGCCAGGCCTAAATaGCTTAAGGAATCATTATTC | + |
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Preference number: 2 (lower is better) Translates to: FNTDSQVVGNEHMLTCQRLARPK*LKESLF Trigger: GAATAATGATTCCTTAAGCCATTTAGGCCTGGCAAG...CCTTTGACATGTCAACATGTGTTCATTTCCAACAACTTGACTGTCAGTGTTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR CAA 90 bp | ACCCGTTCGTTCATCACTGTGGAGGATCTTAAAGAGGTGTTCTTTTaGTTGTCGTTGTTGTTCTTTGTTTGTTTTGTCCATATTATACAT | + |
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Preference number: 2 (lower is better) Translates to: TRSFITVEDLKEVFF*LSLLFFVCFVHIIH Trigger: ATGTATAATATGGACAAAACAAACAAAGAACAACAACGACAACAAAAAGAACACCTCTTTAAGATCCTCCACAGTGATGAACGAACGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR TCA 72 bp | AAGCTTAGAGCCTCTCAGAAGGTTAGGAACCAGTGGTaGGTCCGGGGTCACCCAAACACCATGCACCATGGG | + |
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Preference number: 3 (lower is better) Translates to: KLRASQKVRNQW*VRGHPNTMHHG Trigger: CCCATGGTGCATGGTGTTTGGGTGACCCCGGACTCACCACTGGTTCCTAACCTTCTGAGAGGCTCTAAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR GCA 72 bp | GCCCCTGGAGGTAACTGGATAGGAAGCAAAATGGCATaGTTTGGCTGTTACAGGCATCCCTCCTTCCATGGC | + |
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Preference number: 3 (lower is better) Translates to: APGGNWIGSKMA*FGCYRHPSFHG Trigger: GCCATGGAAGGAGGGATGCCTGTAACAGCCAAAGCATGCCATTTTGCTTCCTATCCAGTTACCTCCAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR CCA 72 bp | ATTAAAGTGGCACCGATGTACCCGTCTTCTGCCATCTaGGGAGGCGTCGCCATTACCCTTGTCACCAGACTT | + |
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Preference number: 3 (lower is better) Translates to: IKVAPMYPSSAI*GGVAITLVTRL Trigger: AAGTCTGGTGACAAGGGTAATGGCGACGCCTCCCCAGATGGCAGAAGACGGGTACATCGGTGCCACTTTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
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| 3UTR TCA 72 bp | CCCAAACACCATGCACCATGGGTGCTATGCCACTCCTaGCATGACTTTTGTAGCCCTCAAAAGACCTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: PKHHAPWVLCHS*HDFCSPQKTFQ Trigger: TTGGAAGGTCTTTTGAGGGCTACAAAAGTCATGTCAGGAGTGGCATAGCACCCATGGTGCATGGTGTTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR TCA 72 bp | CAGGTCTTCCTGGCTGTCAAATTTTATCTCAGAGGCTaGCACGTAGCAGGGCTCACTCTGAAGATAGCGTTC | + |
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Preference number: 3 (lower is better) Translates to: QVFLAVKFYLRG*HVAGLTLKIAF Trigger: GAACGCTATCTTCAGAGTGAGCCCTGCTACGTGTCAGCCTCTGAGATAAAATTTGACAGCCAGGAAGACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
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| 3UTR GCA 72 bp | TCACAGTGGGAGCATTTAAAAGGCTTGGCACCGGTATaGTTTCGGAAGTGTCTGGTCAACTCATCACTTCTT | + |
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Preference number: 3 (lower is better) Translates to: SQWEHLKGLAPV*FRKCLVNSSLL Trigger: AAGAAGTGATGAGTTGACCAGACACTTCCGAAAGCATACCGGTGCCAAGCCTTTTAAATGCTCCCACTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
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| 3UTR GCA 72 bp | CTCCATGTAGCCAGTAAAACAAGCTACTTGACACACTaGACATTCTATAGCTGCACCAGACACCAGAAAGTC | + |
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Preference number: 3 (lower is better) Translates to: LHVASKTSYLTH*TFYSCTRHQKV Trigger: GACTTTCTGGTGTCTGGTGCAGCTATAGAATGTGCAGTGTGTCAAGTAGCTTGTTTTACTGGCTACATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR CCA 72 bp | TTTCTAAGGTGCAGACACCCTTCAGGAAATGATTGGTaGTCAACTCATCCCTTGGTATACTCCTCACACACA | + |
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Preference number: 3 (lower is better) Translates to: FLRCRHPSGNDW*STHPLVYSSHT Trigger: TGTGTGTGAGGAGTATACCAAGGGATGAGTTGACCACCAATCATTTCCTGAAGGGTGTCTGCACCTTAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR-3UTR CAA 90 bp | TATCAGAAATATCAGCTGTCTACGCTGTGGTATGCCAAATTCCGGGAAAGTACTTGGTCAACTCATCCCTaGGTATACTCCTCACACACA | + |
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Preference number: 3 (lower is better) Translates to: YQKYQLSTLWYAKFRESTWSTHP*VYSSHT Trigger: TGTGTGTGAGGAGTATACCAAGGGATGAGTTGACCA...AGTACTTTCCCGGAATTTGGCATACCACAGCGTAGACAGCTGATATTTCTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
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| 3UTR TCA 72 bp | TGTGTGTGTATGTGTGTGTGGGTGTGTGTGGGTATGTaGGATCTGTACAGTTGTGCAAGGTCTCTTAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CVCMCVWVCVGM*DLYSCARSLKR Trigger: TCTTTTAAGAGACCTTGCACAACTGTACAGATCTCACATACCCACACACACCCACACACACATACACACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| 3UTR TCA 72 bp | GTGAAAGTTCCTCTGAACTGTCCGAAGACTCACTGCTaGCATCAGAGTTCAGGCTATTGGTCTCTAAGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: VKVPLNCPKTHC*HQSSGYWSLSY Trigger: ATAACTTAGAGACCAATAGCCTGAACTCTGATGTCAGCAGTGAGTCTTCGGACAGTTCAGAGGAACTTTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
||
| 3UTR GCA 72 bp | AAAACAAGCTACTTGACACACTGCACATTCTATAGCTaGACCAGACACCAGAAAGTCCTTTCACACAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KTSYLTHCTFYS*TRHQKVLSHRK Trigger: TTTCCTGTGTGAAAGGACTTTCTGGTGTCTGGTGCAGCTATAGAATGTGCAGTGTGTCAAGTAGCTTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAAAAAGCCAAGCAGCTGGATGAAATATCAGAAATATCAGCTGTCTACGCTTGGTTGGCCAGTATTTaGTTCATGCCCCTTCTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TQKAKQLDEISEISAVYAWLASI*FMPLLN Trigger: ATTTAGAAGGGGCATGAACAAAATACTGGCCAACCA...AGCGTAGACAGCTGATATTTCTGATATTTCATCCAGCTGCTTGGCTTTTTGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| 3UTR TCA 72 bp | ACACTGACAGTCAAGTTGTTGGAAATGAACACATGTTaGCATGTCAAAGGACTTTTCACCCGTTCGTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: TLTVKLLEMNTC*HVKGLFTRSFI Trigger: GATGAACGAACGGGTGAAAAGTCCTTTGACATGTCAACATGTGTTCATTTCCAACAACTTGACTGTCAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| 3UTR GCA 72 bp | GAAATATCAGAAATATCAGCTGTCTACGCTGTGGTATaGCAAATTCCGGGAAAGTACTCCTTGAAAAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EISEISAVYAVV*QIPGKYSLKKL Trigger: CAGCTTTTTCAAGGAGTACTTTCCCGGAATTTGGCATACCACAGCGTAGACAGCTGATATTTCTGATATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| 3UTR CCA 72 bp | ATGTCAAAGGACTTTTCACCCGTTCGTTCATCACTGTaGAGGATCTTAAAGAGGTGTTCTTTTTGTTGTCGT | + |
|
Preference number: 3 (lower is better) Translates to: MSKDFSPVRSSL*RILKRCSFCCR Trigger: ACGACAACAAAAAGAACACCTCTTTAAGATCCTCCACAGTGATGAACGAACGGGTGAAAAGTCCTTTGACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAAAAAGCCAAGCAGCTGGATGAAATATCAGAAATATCAGCTGTCTACGCTACAGGTACTCAAAACTaGTGCCTTTTGAGCAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: TQKAKQLDEISEISAVYATGTQN*CLLSKI Trigger: TATCTTGCTCAAAAGGCACAAGTTTTGAGTACCTGT...AGCGTAGACAGCTGATATTTCTGATATTTCATCCAGCTGCTTGGCTTTTTGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAAAAAGCCAAGCAGCTGGATGAAATATCAGAAATATCAGCTGTCTACGCTTCCTTTATGGCCATTTaGAAATACTTCTTCACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TQKAKQLDEISEISAVYASFMAI*KYFFTG Trigger: GCCTGTGAAGAAGTATTTCAAAATGGCCATAAAGGA...AGCGTAGACAGCTGATATTTCTGATATTTCATCCAGCTGCTTGGCTTTTTGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| 3UTR CAA 72 bp | CGTCTTCTGCCATCTGGGGAGGCGTCGCCATTACCCTaGTCACCAGACTTCCCAGAGGTCCCACTTCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: RLLPSGEASPLP*SPDFPEVPLRT Trigger: GGTTCGAAGTGGGACCTCTGGGAAGTCTGGTGACAAGGGTAATGGCGACGCCTCCCCAGATGGCAGAAGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
||
| 3UTR CAA 72 bp | CCCCTTCTAAATGGCCGAAGGTCCCCTATTCCAGGCTaGCCAATCGTGACTAGCAGAATCAGCAGCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLLNGRRSPIPG*PIVTSRISSLE Trigger: TTCCAGGCTGCTGATTCTGCTAGTCACGATTGGCAAGCCTGGAATAGGGGACCTTCGGCCATTTAGAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS-3UTR TCA 90 bp | TCCCACCCACTAACATTCTCAGTGCGCATGCTCACGGCCAAAAGCTTAGAGCCTATGGAGGTGTGGAAATaGCGGAGGAACTCAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHPLTFSVRMLTAKSLEPMEVWK*RRNSDF Trigger: GAAATCTGAGTTCCTCCGTCATTTCCACACCTCCAT...AGGCTCTAAGCTTTTGGCCGTGAGCATGCGCACTGAGAATGTTAGTGGGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS-3UTR GCA 90 bp | TCGCCATTACCCTTGTCACCAGACTTCCCAGAGGTCCCACTTCGAACCTTCCCAGTAGTTCCTGGAAGATaGTACACATTGGGAGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLPLSPDFPEVPLRTFPVVPGR*YTLGAH Trigger: ATGTGCTCCCAATGTGTAGCATCTTCCAGGAACTAC...TGGGAAGGTTCGAAGTGGGACCTCTGGGAAGTCTGGTGACAAGGGTAATGGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
||
| 3UTR CAA 72 bp | GCCTTAATTAAGCATGCGTCACCCATTCCCCTGTATTaGACCCCACAGAAGGGCCAGTTGCATAAGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ALIKHASPIPLY*TPQKGQLHKAP Trigger: TGGTGCCTTATGCAACTGGCCCTTCTGTGGGGTCAAATACAGGGGAATGGGTGACGCATGCTTAATTAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS-3UTR CCA 90 bp | TTATCTCAGAGGCTGACACGTAGCAGGGCTCACTCTGAAGATAGCGTTCCAACTGAAGATGCTACACATTaGGAGCACATCCATGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQRLTRSRAHSEDSVPTEDATH*EHIHVG Trigger: CCCGACATGGATGTGCTCCCAATGTGTAGCATCTTC...AGTTGGAACGCTATCTTCAGAGTGAGCCCTGCTACGTGTCAGCCTCTGAGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
||
| CDS-3UTR CCA 90 bp | TCGCCATTACCCTTGTCACCAGACTTCCCAGAGGTCCCACTTCGAACCTTCCCAACAATCTGTAGTTCCTaGAAGATGCTACACATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLPLSPDFPEVPLRTFPTICSS*KMLHIG Trigger: CCCAATGTGTAGCATCTTCCAGGAACTACAGATTGT...TGGGAAGGTTCGAAGTGGGACCTCTGGGAAGTCTGGTGACAAGGGTAATGGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
||
| CDS-3UTR GCA 90 bp | GTAAACTTTCCTGCAGCCATTAAAGTGGCACCGATGTACCCGTCTTCTGCCATCCTTTCTAGCCACTGTTaGCAATATTCCTCCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VNFPAAIKVAPMYPSSAILSSHC*QYSSRD Trigger: GTCCCTGGAGGAATATTGGCAACAGTGGCTAGAAAG...GATGGCAGAAGACGGGTACATCGGTGCCACTTTAATGGCTGCAGGAAAGTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
||
| CDS-3UTR CCA 90 bp | TCCCACCCACTAACATTCTCAGTGCGCATGCTCACGGCCAAAAGCTTAGAGCCTGTCCACAGGTCTTCCTaGCTGTCAAATTTTATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHPLTFSVRMLTAKSLEPVHRSS*LSNFIS Trigger: TGAGATAAAATTTGACAGCCAGGAAGACCTGTGGAC...AGGCTCTAAGCTTTTGGCCGTGAGCATGCGCACTGAGAATGTTAGTGGGTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS-3UTR TCA 90 bp | TATCAGAAATATCAGCTGTCTACGCTGTGGTATGCCAAATTCCGGGAAAGTACTCTCACAACCTTCCCATaGGCATCTGTAAGGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YQKYQLSTLWYAKFRESTLTTFP*ASVRLF Trigger: GAAAAGCCTTACAGATGCTCATGGGAAGGTTGTGAG...AGTACTTTCCCGGAATTTGGCATACCACAGCGTAGACAGCTGATATTTCTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAAAAAGCCAAGCAGCTGGATGAAATATCAGAAATATCAGCTGTCTACGCTGTGAGTGCGCTGATGTaGTTTCAAGTGGGAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQKAKQLDEISEISAVYAVSALM*FQVGAF Trigger: AAAAGCTCCCACTTGAAAGCACATCAGCGCACTCAC...AGCGTAGACAGCTGATATTTCTGATATTTCATCCAGCTGCTTGGCTTTTTGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS-3UTR GCA 90 bp | TTTAACACTGACAGTCAAGTTGTTGGAAATGAACACATGTTGACATGTCAAAGGGGCTTGGCACCGGTATaGTTTCGGAAGTGTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FNTDSQVVGNEHMLTCQRGLAPV*FRKCLV Trigger: GACCAGACACTTCCGAAAGCATACCGGTGCCAAGCC...CCTTTGACATGTCAACATGTGTTCATTTCCAACAACTTGACTGTCAGTGTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS-3UTR CCA 90 bp | TATCAGAAATATCAGCTGTCTACGCTGTGGTATGCCAAATTCCGGGAAAGTACTTTCCCTGTTCACTTCTaGAGAAGATGGAGGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YQKYQLSTLWYAKFRESTFPVHF*RRWRCG Trigger: TCCACACCTCCATCTTCTCCAGAAGTGAACAGGGAA...AGTACTTTCCCGGAATTTGGCATACCACAGCGTAGACAGCTGATATTTCTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| 3UTR CAA 72 bp | ACAAATGAGCTCCATGTAGCCAGTAAAACAAGCTACTaGACACACTGCACATTCTATAGCTGCACCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: TNELHVASKTSY*THCTFYSCTRH Trigger: GTGTCTGGTGCAGCTATAGAATGTGCAGTGTGTCAAGTAGCTTGTTTTACTGGCTACATGGAGCTCATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| 3UTR CAA 72 bp | TTGACTAAGACTTCACCAATGGGATCAGAGGTAAATTaGGTCGTGGGTGAAAGTTCCTCTGAACTGTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTKTSPMGSEVN*VVGESSSELSE Trigger: TTCGGACAGTTCAGAGGAACTTTCACCCACGACCAAATTTACCTCTGATCCCATTGGTGAAGTCTTAGTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
||
| 3UTR CAA 72 bp | GGTGTGGAAATGACGGAGGAACTCAGATTTCCTGAATaGACTAAGACTTCACCAATGGGATCAGAGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GVEMTEELRFPE*TKTSPMGSEVN Trigger: ATTTACCTCTGATCCCATTGGTGAAGTCTTAGTCAATTCAGGAAATCTGAGTTCCTCCGTCATTTCCACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
||
| CDS-3UTR CCA 90 bp | TTTAACACTGACAGTCAAGTTGTTGGAAATGAACACATGTTGACATGTCAAAGGGAAGATGCTACACATTaGGAGCACATCCATGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FNTDSQVVGNEHMLTCQREDATH*EHIHVG Trigger: CCCGACATGGATGTGCTCCCAATGTGTAGCATCTTC...CCTTTGACATGTCAACATGTGTTCATTTCCAACAACTTGACTGTCAGTGTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAAAAAGCCAAGCAGCTGGATGAAATATCAGAAATATCAGCTGTCTACGCTAAACACCTGTCACAGTaGGAGCATTTAAAAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TQKAKQLDEISEISAVYAKHLSQ*EHLKGL Trigger: CAAGCCTTTTAAATGCTCCCACTGTGACAGGTGTTT...AGCGTAGACAGCTGATATTTCTGATATTTCATCCAGCTGCTTGGCTTTTTGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS-3UTR GCA 90 bp | GAAGATCAAACGAAATACCAGCCCAGCCAGACTCATTCTCATATATGTAAAGATGTAGTTCCTGGAAGATaGTACACATTGGGAGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: EDQTKYQPSQTHSHICKDVVPGR*YTLGAH Trigger: ATGTGCTCCCAATGTGTAGCATCTTCCAGGAACTAC...ATCTTTACATATATGAGAATGAGTCTGGCTGGGCTGGTATTTCGTTTGATCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS-3UTR CCA 90 bp | GAAGATCAAACGAAATACCAGCCCAGCCAGACTCATTCTCATATATGTAAAGATGCTTTCGGAAGTGTCTaGTCAACTCATCACTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EDQTKYQPSQTHSHICKDAFGSV*STHHFL Trigger: CAAGAAGTGATGAGTTGACCAGACACTTCCGAAAGC...ATCTTTACATATATGAGAATGAGTCTGGCTGGGCTGGTATTTCGTTTGATCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS-3UTR TCA 90 bp | TTTAACACTGACAGTCAAGTTGTTGGAAATGAACACATGTTGACATGTCAAAGGAGAAATCTTCAGTTCTaGTTCCTCCTTCTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FNTDSQVVGNEHMLTCQRRNLQF*FLLLLP Trigger: GGGGAGAAGAAGGAGGAATCAGAACTGAAGATTTCT...CCTTTGACATGTCAACATGTGTTCATTTCCAACAACTTGACTGTCAGTGTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS-3UTR CCA 90 bp | GAAGATCAAACGAAATACCAGCCCAGCCAGACTCATTCTCATATATGTAAAGATACAATCTGTAGTTCCTaGAAGATGCTACACATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EDQTKYQPSQTHSHICKDTICSS*KMLHIG Trigger: CCCAATGTGTAGCATCTTCCAGGAACTACAGATTGT...ATCTTTACATATATGAGAATGAGTCTGGCTGGGCTGGTATTTCGTTTGATCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS-3UTR CCA 90 bp | TTTAACACTGACAGTCAAGTTGTTGGAAATGAACACATGTTGACATGTCAAAGGGATCAGAGAGTCCTCTaGGGGACTAGAAGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FNTDSQVVGNEHMLTCQRDQRVL*GTRRNL Trigger: AAGATTTCTTCTAGTCCCCCAGAGGACTCTCTGATC...CCTTTGACATGTCAACATGTGTTCATTTCCAACAACTTGACTGTCAGTGTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| 3UTR CAA 72 bp | ATTTCAAGCAAAAGTTCCTGCTTGATTGAGGCTCAGTaGTCACCTGACCAGAATGGACTGCTTAGTATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISSKSSCLIEAQ*SPDQNGLLSIK Trigger: TTTAATACTAAGCAGTCCATTCTGGTCAGGTGACAACTGAGCCTCAATCAAGCAGGAACTTTTGCTTGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| 3UTR CAA 72 bp | ATTCAAATTCCGAGTCGTCGAAAATACAACCCTACATaGCACAAGATCATTTTGCATGGGAGTGTTACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IQIPSRRKYNPT*HKIILHGSVTK Trigger: TTTTGTAACACTCCCATGCAAAATGATCTTGTGCAATGTAGGGTTGTATTTTCGACGACTCGGAATTTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| 3UTR CAA 72 bp | TTCATCACTGTGGAGGATCTTAAAGAGGTGTTCTTTTaGTTGTCGTTGTTGTTCTTTGTTTGTTTTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FITVEDLKEVFF*LSLLFFVCFVH Trigger: ATGGACAAAACAAACAAAGAACAACAACGACAACAAAAAGAACACCTCTTTAAGATCCTCCACAGTGATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| 3UTR CAA 72 bp | ATCACTGTGGAGGATCTTAAAGAGGTGTTCTTTTTGTaGTCGTTGTTGTTCTTTGTTTGTTTTGTCCATATT | + |
|
Preference number: 4 (lower is better) Translates to: ITVEDLKEVFFL*SLLFFVCFVHI Trigger: AATATGGACAAAACAAACAAAGAACAACAACGACAACAAAAAGAACACCTCTTTAAGATCCTCCACAGTGAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS-3UTR CAA 90 bp | ATGTACCCGTCTTCTGCCATCTGGGGAGGCGTCGCCATTACCCTTGTCACCAGAGGAAGATGCTACACATaGGGAGCACATCCATGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: MYPSSAIWGGVAITLVTRGRCYT*GAHPCR Trigger: CCGACATGGATGTGCTCCCAATGTGTAGCATCTTCC...TCTGGTGACAAGGGTAATGGCGACGCCTCCCCAGATGGCAGAAGACGGGTACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222857.2 |
||
| CDS CCA 90 bp | AGTTCCTGGAAGATGCTACACATTGGGAGCACATCCATGTCGGGTTaGAAAAGACAGTCCTCGCTGTCGGGAAAACAGGGAGGTGAACGA | + |
|
Preference number: 5 (lower is better) Translates to: SSWKMLHIGSTSMSG*KRQSSLSGKQGGER Trigger: TCGTTCACCTCCCTGTTTTCCCGACAGCGAGGACTGTCTTTTCCAACCCGACATGGATGTGCTCCCAATGTGTAGCATCTTCCAGGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000080.8 ENSMUST00000222857.2 |
||
| CDS-3UTR CAA 90 bp | TCCCACCCACTAACATTCTCAGTGCGCATGCTCACGGCCAAAAGCTTAGAGCCTGAGCATTTAAAAGGCTaGGCACCGGTATGCTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SHPLTFSVRMLTAKSLEPEHLKG*APVCFR Trigger: CCGAAAGCATACCGGTGCCAAGCCTTTTAAATGCTC...AGGCTCTAAGCTTTTGGCCGTGAGCATGCGCACTGAGAATGTTAGTGGGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS-3UTR CAA 90 bp | GAAGATCAAACGAAATACCAGCCCAGCCAGACTCATTCTCATATATGTAAAGATGGAAGATGCTACACATaGGGAGCACATCCATGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: EDQTKYQPSQTHSHICKDGRCYT*GAHPCR Trigger: CCGACATGGATGTGCTCCCAATGTGTAGCATCTTCC...ATCTTTACATATATGAGAATGAGTCTGGCTGGGCTGGTATTTCGTTTGATCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000080.8 |
||
| CDS CAA 72 bp | GAAGATGCTACACATTGGGAGCACATCCATGTCGGGTaGGAAAAGACAGTCCTCGCTGTCGGGAAAACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: EDATHWEHIHVG*EKTVLAVGKTG Trigger: CCCTGTTTTCCCGACAGCGAGGACTGTCTTTTCCAACCCGACATGGATGTGCTCCCAATGTGTAGCATCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000080.8 ENSMUST00000222857.2 |
||
| CDS CAA 90 bp | AGCCCGTTTCGTGCACAATCTGTAGTTCCTGGAAGATGCTACACATaGGGAGCACATCCATGTCGGGTTGGAAAAGACAGTCCTCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SPFRAQSVVPGRCYT*GAHPCRVGKDSPRC Trigger: ACAGCGAGGACTGTCTTTTCCAACCCGACATGGATGTGCTCCCAATGTGTAGCATCTTCCAGGAACTACAGATTGTGCACGAAACGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000080.8 ENSMUST00000222857.2 |
||
| CDS GCA 72 bp | AGCCCGTTTCGTGCACAATCTGTAGTTCCTGGAAGATaGTACACATTGGGAGCACATCCATGTCGGGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPFRAQSVVPGR*YTLGAHPCRVG Trigger: TCCAACCCGACATGGATGTGCTCCCAATGTGTAGCATCTTCCAGGAACTACAGATTGTGCACGAAACGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000080.8 ENSMUST00000222857.2 |
||
| CDS CCA 72 bp | AAGATGCTACACATTGGGAGCACATCCATGTCGGGTTaGAAAAGACAGTCCTCGCTGTCGGGAAAACAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KMLHIGSTSMSG*KRQSSLSGKQG Trigger: TCCCTGTTTTCCCGACAGCGAGGACTGTCTTTTCCAACCCGACATGGATGTGCTCCCAATGTGTAGCATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000080.8 ENSMUST00000222857.2 |
||
| CDS CAA 72 bp | CGTGCACAATCTGTAGTTCCTGGAAGATGCTACACATaGGGAGCACATCCATGTCGGGTTGGAAAAGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: RAQSVVPGRCYT*GAHPCRVGKDS Trigger: ACTGTCTTTTCCAACCCGACATGGATGTGCTCCCAATGTGTAGCATCTTCCAGGAACTACAGATTGTGCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000080.8 ENSMUST00000222857.2 |
||