Pregenerated sensors for KLF5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005148Ensembl transcript IDs: ENSMUST00000005279.8, ENSMUST00000226784.2
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGATGGACTAGGCCTCTCAGACAAGCCAAGGCCCGGGGTTGGCTaGAGAGGAATGCTTCAAATCCTGCCCTCACCCTGGCCGAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: KDGLGLSDKPRPGVG*RGMLQILPSPWPSS Trigger: AGAGCTCGGCCAGGGTGAGGGCAGGATTTGAAGCATTCCTCTCCAGCCAACCCCGGGCCTTGGCTTGTCTGAGAGGCCTAGTCCATCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR GCA 90 bp | ACAAGCCAAGGCCCGGGGTTGGCTGGAGAGGAATGCTTCAAATCCTaGCCTCACCCTGGCCGAGCTCTTTCACCCTCTGCAGATCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: TSQGPGLAGEECFKS*PHPGRALSPSADLR Trigger: CCTAAGATCTGCAGAGGGTGAAAGAGCTCGGCCAGGGTGAGGGCAGGATTTGAAGCATTCCTCTCCAGCCAACCCCGGGCCTTGGCTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR GCA 90 bp | CGGTTCCCCATGCTGAGATGCGGCTGCCTGTCTGGAGAGGAAGTTTaGTGGGATAAAGCTAGTGGTGAGCATGAGAGCAAGCTTCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: RFPMLRCGCLSGEEV*WDKASGEHESKLPA Trigger: AGCTGGAAGCTTGCTCTCATGCTCACCACTAGCTTTATCCCAGCAAACTTCCTCTCCAGACAGGCAGCCGCATCTCAGCATGGGGAACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR TCA 90 bp | CAGATAACCAAGCACTGCTCCCTCCTAACACGCATACACAATGTCTaGAACCATACTCTCACAGAGCTCTGCTTCGCCACTGACCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: QITKHCSLLTRIHNV*NHTLTELCFATDLC Trigger: ACAAAGGTCAGTGGCGAAGCAGAGCTCTGTGAGAGTATGGTTTCAGACATTGTGTATGCGTGTTAGGAGGGAGCAGTGCTTGGTTATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR TCA 90 bp | CATGCAAAAATCCGCATAAATTGTCATTTCGCCAACAGCACTGCATaGGCAAACATCCTAGAAATCCTGGAAATTCAATGCTTCCACGAG | + |
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Preference number: 1 (lower is better) Translates to: HAKIRINCHFANSTA*ANILEILEIQCFHE Trigger: CTCGTGGAAGCATTGAATTTCCAGGATTTCTAGGATGTTTGCTCATGCAGTGCTGTTGGCGAAATGACAATTTATGCGGATTTTTGCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR CCA 90 bp | TGGACTCTTCTGGCACCTGTCAACTCTATTTGGGAGGTTTTAGACTaGAGTTTGAATCATCTTTGGATTTATTCTGTTCATGCTTACCTG | + |
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Preference number: 1 (lower is better) Translates to: WTLLAPVNSIWEVLD*SLNHLWIYSVHAYL Trigger: CAGGTAAGCATGAACAGAATAAATCCAAAGATGATTCAAACTCCAGTCTAAAACCTCCCAAATAGAGTTGACAGGTGCCAGAAGAGTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR TCA 90 bp | GAAACAACAGCTCAAATGTTCCTAAACTACTTCTGTTTCTCCTCTTaGTCCAAAGCTCAAAACCCCATGTTCAGTGTTTCCCTAACACTA | + |
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Preference number: 1 (lower is better) Translates to: ETTAQMFLNYFCFSS*SKAQNPMFSVSLTL Trigger: TAGTGTTAGGGAAACACTGAACATGGGGTTTTGAGCTTTGGATCAAGAGGAGAAACAGAAGTAGTTTAGGAACATTTGAGCTGTTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR GCA 90 bp | AGTACATGCAAAAATCCGCATAAATTGTCATTTCGCCAACAGCACTaGATGAGCAAACATCCTAGAAATCCTGGAAATTCAATGCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: STCKNPHKLSFRQQH*MSKHPRNPGNSMLP Trigger: TGGAAGCATTGAATTTCCAGGATTTCTAGGATGTTTGCTCATGCAGTGCTGTTGGCGAAATGACAATTTATGCGGATTTTTGCATGTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR CCA 90 bp | TTTAGTGTTTCTATATGGACTCTTCTGGCACCTGTCAACTCTATTTaGGAGGTTTTAGACTGGAGTTTGAATCATCTTTGGATTTATTCT | + |
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Preference number: 1 (lower is better) Translates to: FSVSIWTLLAPVNSI*EVLDWSLNHLWIYS Trigger: AGAATAAATCCAAAGATGATTCAAACTCCAGTCTAAAACCTCCCAAATAGAGTTGACAGGTGCCAGAAGAGTCCATATAGAAACACTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR-3UTR TCA 90 bp | GCACCCCCACCGGTTCCCCATGCTGAGATGCGGCTGCCTGTCTGGAGAGGAAGTCAAACACTTTGGTATTaGTACAATGTATTCCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: APPPVPHAEMRLPVWRGSQTLWY*YNVFPV Trigger: CACAGGGAATACATTGTATCAATACCAAAGTGTTTG...ACTTCCTCTCCAGACAGGCAGCCGCATCTCAGCATGGGGAACCGGTGGGGGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR-3UTR GCA 90 bp | TTATCAAAACTCAATTTCCATAGTAACCTCCAGCCTAGGGAGAGGCAAGTCCTCGAATGCTTCAAATCCTaGCCTCACCCTGGCCGAGCT | + |
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Preference number: 2 (lower is better) Translates to: LSKLNFHSNLQPRERQVLECFKS*PHPGRA Trigger: AGCTCGGCCAGGGTGAGGGCAGGATTTGAAGCATTC...GAGGACTTGCCTCTCCCTAGGCTGGAGGTTACTATGGAAATTGAGTTTTGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR-3UTR TCA 90 bp | TTATCAAAACTCAATTTCCATAGTAACCTCCAGCCTAGGGAGAGGCAAGTCCTCAGGGCGGCTTCAAAATaGATAGCTCCTACAAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: LSKLNFHSNLQPRERQVLRAASK*IAPTRG Trigger: CCCCCTTGTAGGAGCTATTCATTTTGAAGCCGCCCT...GAGGACTTGCCTCTCCCTAGGCTGGAGGTTACTATGGAAATTGAGTTTTGATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAAAATAAGGGAGGAGGCGGCAGAACAGCAGCCGAGTTATGCTTCTGATGTATGGCTATTTGTGAACTaGCAGGTACACACAACCGTG | + |
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Preference number: 2 (lower is better) Translates to: TKIREEAAEQQPSYASDVWLFVN*QVHTTV Trigger: CACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCA...TACATCAGAAGCATAACTCGGCTGCTGTTCTGCCGCCTCCTCCCTTATTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGGTACAAGCATTCAGAGCAGTAAACCCTGACAGGGTGGAAAGGCTATTTCAAGCAAGCCCTTGCTaGAAAGGTAGGCCATTAAAA | + |
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Preference number: 2 (lower is better) Translates to: SQVQAFRAVNPDRVERLFQASPC*KGRPLK Trigger: TTTTAATGGCCTACCTTTTCAGCAAGGGCTTGCTTG...AAATAGCCTTTCCACCCTGTCAGGGTTTACTGCTCTGAATGCTTGTACCTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR-3UTR GCA 90 bp | AACAAAATTTTTGTTCAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGTTCCCCATGCTGAGATaGGGCTGCCTGTCTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: NKIFVQWLFVNCQVHTTVFPMLR*GCLSGE Trigger: CTCTCCAGACAGGCAGCCGCATCTCAGCATGGGGAA...CACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTGAACAAAAATTTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR-3UTR TCA 90 bp | CGGGTTTTAGGAAGTGTTAGGCATTCAGATAACCAAGCACTGCTCCCTCCTAACCTGCCGTTTACGTTTTaGGGGTCATTAATTCTACGT | + |
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Preference number: 2 (lower is better) Translates to: RVLGSVRHSDNQALLPPNLPFTF*GSLILR Trigger: ACGTAGAATTAATGACCCTCAAAACGTAAACGGCAG...GTTAGGAGGGAGCAGTGCTTGGTTATCTGAATGCCTAACACTTCCTAAAACCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR-3UTR CCA 90 bp | AACAAAATTTTTGTTCAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGCTGCGGTTTAAAGGATaGCAGAGCGGACTGCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: NKIFVQWLFVNCQVHTTVLRFKG*QSGLQG Trigger: GCCTTGCAGTCCGCTCTGCCATCCTTTAAACCGCAG...CACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTGAACAAAAATTTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAAAATAAGGGAGGAGGCGGCAGAACAGCAGCCGAGTTATGCTTCTGATGTAGTGGTTTCTGTCCTTTaGTTAACAGCATCCATGTCA | + |
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Preference number: 2 (lower is better) Translates to: TKIREEAAEQQPSYASDVVVSVL*LTASMS Trigger: TGACATGGATGCTGTTAACCAAAGGACAGAAACCAC...TACATCAGAAGCATAACTCGGCTGCTGTTCTGCCGCCTCCTCCCTTATTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGGTACAAGCATTCAGAGCAGTAAACCCTGACAGGGTGGAAAGGCTATTTCCTGTCAACTCTATTTaGGAGGTTTTAGACTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: SQVQAFRAVNPDRVERLFPVNSI*EVLDWS Trigger: ACTCCAGTCTAAAACCTCCCAAATAGAGTTGACAGG...AAATAGCCTTTCCACCCTGTCAGGGTTTACTGCTCTGAATGCTTGTACCTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR-3UTR GCA 90 bp | AACAAAATTTTTGTTCAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGATGCTGAGATGCGGCTaGCTGTCTGGAGAGGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: NKIFVQWLFVNCQVHTTVMLRCG*LSGEEV Trigger: AACTTCCTCTCCAGACAGGCAGCCGCATCTCAGCAT...CACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTGAACAAAAATTTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR-3UTR CCA 90 bp | TACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACAATACAGGAGAGGAAGTTTGCTaGGATAAAGCTAGTGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: YSSTAACSDICIGNYHNTGEEVC*DKASGE Trigger: CTCACCACTAGCTTTATCCCAGCAAACTTCCTCTCC...TGTATTGTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTTTCCCTAACACTAGTCTACAAAAGGACATTTTAGTAGGTTGCTTTAGTGCTCTGCTTCGCCACTaGCCTTTGTCCAAAAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: QCFPNTSLQKDILVGCFSALLRH*PLSKSF Trigger: AAAGCTTTTGGACAAAGGTCAGTGGCGAAGCAGAGC...ACTAAAGCAACCTACTAAAATGTCCTTTTGTAGACTAGTGTTAGGGAAACACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR-3UTR GCA 90 bp | AAATTCTACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACTCTGGAGAGGAAGTTTaGTGGGATAAAGCTAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: KFYSSTAACSDICIGNYHSGEEV*WDKASG Trigger: ACCACTAGCTTTATCCCAGCAAACTTCCTCTCCAGA...GTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTAGAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAAAAATCCGCATAAATTGTCATTTCGCCAACAGCACTGCATGAGCAAACATCAATGCTTCCACGAGTaGAAACAGAGTCTTAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: CKNPHKLSFRQQHCMSKHQCFHE*KQSLKF Trigger: GAACTTAAGACTCTGTTTTCACTCGTGGAAGCATTG...ATGTTTGCTCATGCAGTGCTGTTGGCGAAATGACAATTTATGCGGATTTTTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR CAA 90 bp | AGAAACAACAGCTCAAATGTTCCTAAACTACTTCTGTTTCTCCTCTaGATCCAAAGCTCAAAACCCCATGTTCAGTGTTTCCCTAACACT | + |
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Preference number: 2 (lower is better) Translates to: RNNSSNVPKLLLFLL*IQSSKPHVQCFPNT Trigger: AGTGTTAGGGAAACACTGAACATGGGGTTTTGAGCTTTGGATCAAGAGGAGAAACAGAAGTAGTTTAGGAACATTTGAGCTGTTGTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR-3UTR CCA 90 bp | AAACTACTTCTGTTTCTCCTCTTGATCCAAAGCTCAAAACCCCATGTTCAGTGTCCTACTTCTCAGACATaGCAAAAAGGTGAAAACACA | + |
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Preference number: 2 (lower is better) Translates to: KLLLFLLLIQSSKPHVQCPTSQT*QKGENT Trigger: TGTGTTTTCACCTTTTTGCCATGTCTGAGAAGTAGG...ACACTGAACATGGGGTTTTGAGCTTTGGATCAAGAGGAGAAACAGAAGTAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR-3UTR GCA 90 bp | AAACATCTTGGAGCCTTACAAAACTATTTACACCATTTGTCGCCTATTTACACGACACGATTGCGTGTGTaGAGTCTTTATAGAAACAGC | + |
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Preference number: 2 (lower is better) Translates to: KHLGALQNYLHHLSPIYTTRLRV*SLYRNS Trigger: GCTGTTTCTATAAAGACTGCACACACGCAATCGTGT...CGTGTAAATAGGCGACAAATGGTGTAAATAGTTTTGTAAGGCTCCAAGATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR CAA 90 bp | AAAATTACTGTCTCACTGGATAGTACATGCAAAAATCCGCATAAATaGTCATTTCGCCAACAGCACTGCATGAGCAAACATCCTAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: KITVSLDSTCKNPHK*SFRQQHCMSKHPRN Trigger: ATTTCTAGGATGTTTGCTCATGCAGTGCTGTTGGCGAAATGACAATTTATGCGGATTTTTGCATGTACTATCCAGTGAGACAGTAATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR-3UTR TCA 90 bp | AAACATCTTGGAGCCTTACAAAACTATTTACACCATTTGTCGCCTATTTACACGTCCAGCTTCTCAAAATaGCCAAACACTTTGGTATTG | + |
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Preference number: 2 (lower is better) Translates to: KHLGALQNYLHHLSPIYTSSFSK*PNTLVL Trigger: CAATACCAAAGTGTTTGGTCATTTTGAGAAGCTGGA...CGTGTAAATAGGCGACAAATGGTGTAAATAGTTTTGTAAGGCTCCAAGATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR-3UTR CCA 90 bp | TACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACAATACAACAATGTATTCCCTGTaGCCTCAAATGTACAAAATA | + |
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Preference number: 2 (lower is better) Translates to: YSSTAACSDICIGNYHNTTMYSL*PQMYKI Trigger: TATTTTGTACATTTGAGGCCACAGGGAATACATTGT...TGTATTGTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR GCA 72 bp | GGCCCGGGGTTGGCTGGAGAGGAATGCTTCAAATCCTaGCCTCACCCTGGCCGAGCTCTTTCACCCTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: GPGLAGEECFKS*PHPGRALSPSA Trigger: TGCAGAGGGTGAAAGAGCTCGGCCAGGGTGAGGGCAGGATTTGAAGCATTCCTCTCCAGCCAACCCCGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR GCA 72 bp | CAGACAAGCCAAGGCCCGGGGTTGGCTGGAGAGGAATaGTTCAAATCCTGCCCTCACCCTGGCCGAGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: QTSQGPGLAGEE*FKSCPHPGRAL Trigger: AAGAGCTCGGCCAGGGTGAGGGCAGGATTTGAAGCATTCCTCTCCAGCCAACCCCGGGCCTTGGCTTGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR CCA 72 bp | CTAGGCCTCTCAGACAAGCCAAGGCCCGGGGTTGGCTaGAGAGGAATGCTTCAAATCCTGCCCTCACCCTGG | + |
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Preference number: 3 (lower is better) Translates to: LGLSDKPRPGVG*RGMLQILPSPW Trigger: CCAGGGTGAGGGCAGGATTTGAAGCATTCCTCTCCAGCCAACCCCGGGCCTTGGCTTGTCTGAGAGGCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR GCA 72 bp | GTGCACCCCCACCGGTTCCCCATGCTGAGATGCGGCTaGCTGTCTGGAGAGGAAGTTTGCTGGGATAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: VHPHRFPMLRCG*LSGEEVCWDKA Trigger: AGCTTTATCCCAGCAAACTTCCTCTCCAGACAGGCAGCCGCATCTCAGCATGGGGAACCGGTGGGGGTGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR CCA 72 bp | TGGACTAGGCCTCTCAGACAAGCCAAGGCCCGGGGTTaGCTGGAGAGGAATGCTTCAAATCCTGCCCTCACC | + |
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Preference number: 3 (lower is better) Translates to: WTRPLRQAKARG*LERNASNPALT Trigger: GGTGAGGGCAGGATTTGAAGCATTCCTCTCCAGCCAACCCCGGGCCTTGGCTTGTCTGAGAGGCCTAGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR-3UTR CAA 90 bp | ACCCTGGCCGAGCTCTTTCACCCTCTGCAGATCTTAGGCCTACTTCTCAGACATTTGGGGAACGGAATTTaGAGCCAAGCAAGCCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: TLAELFHPLQILGLLLRHLGNGI*SQASPC Trigger: GCAAGGGCTTGCTTGGCTCAAAATTCCGTTCCCCAA...ATGTCTGAGAAGTAGGCCTAAGATCTGCAGAGGGTGAAAGAGCTCGGCCAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR GCA 72 bp | ATGCTGAGATGCGGCTGCCTGTCTGGAGAGGAAGTTTaGTGGGATAAAGCTAGTGGTGAGCATGAGAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: MLRCGCLSGEEV*WDKASGEHESK Trigger: CTTGCTCTCATGCTCACCACTAGCTTTATCCCAGCAAACTTCCTCTCCAGACAGGCAGCCGCATCTCAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR CCA 72 bp | CTGAGATGCGGCTGCCTGTCTGGAGAGGAAGTTTGCTaGGATAAAGCTAGTGGTGAGCATGAGAGCAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: LRCGCLSGEEVC*DKASGEHESKL Trigger: AAGCTTGCTCTCATGCTCACCACTAGCTTTATCCCAGCAAACTTCCTCTCCAGACAGGCAGCCGCATCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR-3UTR CAA 90 bp | ACAAAAATAAGGGAGGAGGCGGCAGAACAGCAGCCGAGTTATGCTTCTGATGTATGTGGTTTCTGTCCTTaGGTTAACAGCATCCATGTC | + |
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Preference number: 3 (lower is better) Translates to: TKIREEAAEQQPSYASDVCGFCP*VNSIHV Trigger: GACATGGATGCTGTTAACCAAAGGACAGAAACCACA...TACATCAGAAGCATAACTCGGCTGCTGTTCTGCCGCCTCCTCCCTTATTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR TCA 72 bp | ACCCTGACAGGGTGGAAAGGCTATTTAGATATAGCCTaGCGATGTGCCTGCAATAAGCACTTGATTACGTCG | + |
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Preference number: 3 (lower is better) Translates to: TLTGWKGYLDIA*RCACNKHLITS Trigger: CGACGTAATCAAGTGCTTATTGCAGGCACATCGTCAGGCTATATCTAAATAGCCTTTCCACCCTGTCAGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR TCA 72 bp | ATCCGCATAAATTGTCATTTCGCCAACAGCACTGCATaGGCAAACATCCTAGAAATCCTGGAAATTCAATGC | + |
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Preference number: 3 (lower is better) Translates to: IRINCHFANSTA*ANILEILEIQC Trigger: GCATTGAATTTCCAGGATTTCTAGGATGTTTGCTCATGCAGTGCTGTTGGCGAAATGACAATTTATGCGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR CCA 72 bp | TCTATATGGACTCTTCTGGCACCTGTCAACTCTATTTaGGAGGTTTTAGACTGGAGTTTGAATCATCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: SIWTLLAPVNSI*EVLDWSLNHLW Trigger: CCAAAGATGATTCAAACTCCAGTCTAAAACCTCCCAAATAGAGTTGACAGGTGCCAGAAGAGTCCATATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR-3UTR CAA 90 bp | AAATTCTACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACGCATTTTACTCTCATTaGAATGATTATCCCCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: KFYSSTAACSDICIGNYHAFYSH*NDYPLP Trigger: GGGGAGGGGATAATCATTCAAATGAGAGTAAAATGC...GTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTAGAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR TCA 72 bp | ATCCTAGAAATCCTGGAAATTCAATGCTTCCACGAGTaGAAACAGAGTCTTAAGTTCAACAAGGAACACAGC | + |
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Preference number: 3 (lower is better) Translates to: ILEILEIQCFHE*KQSLKFNKEHS Trigger: GCTGTGTTCCTTGTTGAACTTAAGACTCTGTTTTCACTCGTGGAAGCATTGAATTTCCAGGATTTCTAGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR-3UTR CAA 90 bp | AATGTTCCTAAACTACTTCTGTTTCTCCTCTTGATCCAAAGCTCAAAACCCCATCATTCAAAGGAGCTGTaGAATACTCTGGTTTCCATA | + |
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Preference number: 3 (lower is better) Translates to: NVPKLLLFLLLIQSSKPHHSKEL*NTLVSI Trigger: TATGGAAACCAGAGTATTCAACAGCTCCTTTGAATG...ATGGGGTTTTGAGCTTTGGATCAAGAGGAGAAACAGAAGTAGTTTAGGAACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR GCA 72 bp | AAAAATCCGCATAAATTGTCATTTCGCCAACAGCACTaGATGAGCAAACATCCTAGAAATCCTGGAAATTCA | + |
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Preference number: 3 (lower is better) Translates to: KNPHKLSFRQQH*MSKHPRNPGNS Trigger: TGAATTTCCAGGATTTCTAGGATGTTTGCTCATGCAGTGCTGTTGGCGAAATGACAATTTATGCGGATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR CCA 72 bp | CAGCATCCATGTCACATTCATAGCCATGTTGCATATTaGTTAAGTTTTCAACACATCACTGATATCAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: QHPCHIHSHVAY*LSFQHITDIKG Trigger: GCCTTTGATATCAGTGATGTGTTGAAAACTTAACCAATATGCAACATGGCTATGAATGTGACATGGATGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| 3UTR CCA 72 bp | CTGGCACCTGTCAACTCTATTTGGGAGGTTTTAGACTaGAGTTTGAATCATCTTTGGATTTATTCTGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LAPVNSIWEVLD*SLNHLWIYSVH Trigger: ATGAACAGAATAAATCCAAAGATGATTCAAACTCCAGTCTAAAACCTCCCAAATAGAGTTGACAGGTGCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR GCA 90 bp | GCACCCCCACCGGTTCCCCATGCTGAGATGCGGCTGCCTGTCTGGAGAGGAAGTAGCACCGGCTTGAGCTaGGCGAACACGGGCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: APPPVPHAEMRLPVWRGSSTGLS*ANTGSS Trigger: GGACGAGCCCGTGTTCGCGCAGCTCAAGCCGGTGCT...ACTTCCTCTCCAGACAGGCAGCCGCATCTCAGCATGGGGAACCGGTGGGGGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTAGGTCTGCGGTTTAAAGGATGGCAGAGCGGACTGCAAGGCGTCAGGCGGCCAGGCGGGCGCTCATaGTCAGCACCCGCGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLGLRFKGWQSGLQGVRRPGGRS*SAPAWA Trigger: TGCCCACGCGGGTGCTGACCATGAGCGCCCGCCTGG...CCGCCTGACGCCTTGCAGTCCGCTCTGCCATCCTTTAAACCGCAGACCTAACTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCCGGGGTTGGCTGGAGAGGAATGCTTCAAATCCTGCCCTCACCCTGGCCGGGAACTGGAGGGAGCTaGGGGGTCAGATACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPGVGWRGMLQILPSPWPGTGGS*GVRYFS Trigger: GGAGAAGTATCTGACCCCTCAGCTCCCTCCAGTTCC...CGGCCAGGGTGAGGGCAGGATTTGAAGCATTCCTCTCCAGCCAACCCCGGGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTAGGTCTGCGGTTTAAAGGATGGCAGAGCGGACTGCAAGGCGTCAGGCGGGGCGGCGCAGGCGGGTaGTGGTGCGCGTGTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLGLRFKGWQSGLQGVRRGGAGG*WCACFR Trigger: TCTGAAACACGCGCACCACCACCCGCCTGCGCCGCC...CCGCCTGACGCCTTGCAGTCCGCTCTGCCATCCTTTAAACCGCAGACCTAACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCCGGGGTTGGCTGGAGAGGAATGCTTCAAATCCTGCCCTCACCCTGGCCGATTGTTCACCTCCTGTaGTGGCGCTGTGGTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RPGVGWRGMLQILPSPWPIVHLL*WRCGLV Trigger: CACCAGACCACAGCGCCACCACAGGAGGTGAACAAT...CGGCCAGGGTGAGGGCAGGATTTGAAGCATTCCTCTCCAGCCAACCCCGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR TCA 90 bp | GCCCGGGGTTGGCTGGAGAGGAATGCTTCAAATCCTGCCCTCACCCTGGCCGAGTCCTTCTGTTGTATCTaGCAGGTGGGAGAGTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ARGWLERNASNPALTLAESFCCI*QVGELA Trigger: CGCCAACTCTCCCACCTGTCAGATACAACAGAAGGA...CTCGGCCAGGGTGAGGGCAGGATTTGAAGCATTCCTCTCCAGCCAACCCCGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR GCA 90 bp | GCACCCCCACCGGTTCCCCATGCTGAGATGCGGCTGCCTGTCTGGAGAGGAAGTACGTGCAAGGGGGCATaGCCTGGAACTGTTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: APPPVPHAEMRLPVWRGSTCKGA*PGTVSL Trigger: CAATGAAACAGTTCCAGGGCATGCCCCCTTGCACGT...ACTTCCTCTCCAGACAGGCAGCCGCATCTCAGCATGGGGAACCGGTGGGGGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | CAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGTACCTCCCATCTCTGCGGCGGCTGGGGCAGTaGTCCCAGGCGGGCGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QWLFVNCQVHTTVYLPSLRRLGQ*SQAGAH Trigger: ATGAGCGCCCGCCTGGGACCACTGCCCCAGCCGCCG...CAGAGATGGGAGGTACACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCCGGGGTTGGCTGGAGAGGAATGCTTCAAATCCTGCCCTCACCCTGGCCGGAACTGGTCTACCACTaGGGCACTGTCTCGTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: RPGVGWRGMLQILPSPWPELVYH*GTVSSI Trigger: TATAGACGAGACAGTGCCTCAGTGGTAGACCAGTTC...CGGCCAGGGTGAGGGCAGGATTTGAAGCATTCCTCTCCAGCCAACCCCGGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCCGGGGTTGGCTGGAGAGGAATGCTTCAAATCCTGCCCTCACCCTGGCCGGGTGGGGTGAGATTCTaGAGCATCTCAGCTTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RPGVGWRGMLQILPSPWPGGVRF*SISACL Trigger: TAGACAAGCTGAGATGCTGCAGAATCTCACCCCACC...CGGCCAGGGTGAGGGCAGGATTTGAAGCATTCCTCTCCAGCCAACCCCGGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGACAGGGCAAGGTCTCACTGGGGAAACCTCAGCCTTCCCGGAACCAGAGGCATAGGACGGAGGTaGGGTGAGATTCTGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGDRARSHWGNLSLPGTRGIGRR*GEILQH Trigger: ATGCTGCAGAATCTCACCCCACCTCCGTCCTATGCC...TCTGGTTCCGGGAAGGCTGAGGTTTCCCCAGTGAGACCTTGCCCTGTCACCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR TCA 90 bp | GCCCGGGGTTGGCTGGAGAGGAATGCTTCAAATCCTGCCCTCACCCTGGCCGAGCTGGAACTGTTTCATTaGCGTCTGTGGAACAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARGWLERNASNPALTLAELELFH*RLWNSR Trigger: TCTGCTGTTCCACAGACGTCAATGAAACAGTTCCAG...CTCGGCCAGGGTGAGGGCAGGATTTGAAGCATTCCTCTCCAGCCAACCCCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGTGACAGGGCAAGGTCTCACTGGGGAAACCTCAGCCTTCCCGGAACCAGAACGTGCAAGGGGGCATaGCCTGGAACTGTTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: EGDRARSHWGNLSLPGTRTCKGA*PGTVSL Trigger: CAATGAAACAGTTCCAGGGCATGCCCCCTTGCACGT...TCTGGTTCCGGGAAGGCTGAGGTTTCCCCAGTGAGACCTTGCCCTGTCACCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR TCA 90 bp | GCCCGGGGTTGGCTGGAGAGGAATGCTTCAAATCCTGCCCTCACCCTGGCCGAGGGAAGACGTTCATGTTaGTGCTGTAAGGTATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ARGWLERNASNPALTLAEGRRSC*CCKVCL Trigger: AAGGCATACCTTACAGCATCAACATGAACGTCTTCC...CTCGGCCAGGGTGAGGGCAGGATTTGAAGCATTCCTCTCCAGCCAACCCCGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCCGGGGTTGGCTGGAGAGGAATGCTTCAAATCCTGCCCTCACCCTGGCCGGTGTGGGTTAAGGCCTaGCATAGAAACATTAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPGVGWRGMLQILPSPWPVWVKA*HRNIKG Trigger: ACCCTTAATGTTTCTATGGCAGGCCTTAACCCACAC...CGGCCAGGGTGAGGGCAGGATTTGAAGCATTCCTCTCCAGCCAACCCCGGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGACAGGGCAAGGTCTCACTGGGGAAACCTCAGCCTTCCCGGAACCAGATCTGGTTTGTCGAACTaGGCATGTCTAGATCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGDRARSHWGNLSLPGTRSGLSN*ACLDPV Trigger: CACCGGATCTAGACATGCCCAGTTCGACAAACCAGA...TCTGGTTCCGGGAAGGCTGAGGTTTCCCCAGTGAGACCTTGCCCTGTCACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGACAGGGCAAGGTCTCACTGGGGAAACCTCAGCCTTCCCGGAACCAGAGACAGGTGGGAGAGTTaGCGAATTAACTGGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EGDRARSHWGNLSLPGTRDRWES*RINWQS Trigger: ACTCTGCCAGTTAATTCGCCAACTCTCCCACCTGTC...TCTGGTTCCGGGAAGGCTGAGGTTTCCCCAGTGAGACCTTGCCCTGTCACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR GCA 90 bp | ACCCTGGCCGAGCTCTTTCACCCTCTGCAGATCTTAGGCCTACTTCTCAGACATTTGGCATGGTGTACGTaGAAGGGGGCATGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLAELFHPLQILGLLLRHLAWCT*KGACPG Trigger: TCCAGGGCATGCCCCCTTGCACGTACACCATGCCAA...ATGTCTGAGAAGTAGGCCTAAGATCTGCAGAGGGTGAAAGAGCTCGGCCAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR GCA 90 bp | ACAAAAATAAGGGAGGAGGCGGCAGAACAGCAGCCGAGTTATGCTTCTGATGTACGCAGCCCTCCCAGGTaGACTTGTAGGGCTTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TKIREEAAEQQPSYASDVRSPPR*TCRASR Trigger: GCGAGAAGCCCTACAAGTGCACCTGGGAGGGCTGCG...TACATCAGAAGCATAACTCGGCTGCTGTTCTGCCGCCTCCTCCCTTATTTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTAGGTCTGCGGTTTAAAGGATGGCAGAGCGGACTGCAAGGCGTCAGGCGGTCCATTACTGCCGTCTaGTTTGTCGAACTGGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KLGLRFKGWQSGLQGVRRSITAV*FVELGM Trigger: CATGCCCAGTTCGACAAACCAGACGGCAGTAATGGA...CCGCCTGACGCCTTGCAGTCCGCTCTGCCATCCTTTAAACCGCAGACCTAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTAGGTCTGCGGTTTAAAGGATGGCAGAGCGGACTGCAAGGCGTCAGGCGGGACAGGTGGGAGAGTTaGCGAATTAACTGGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLGLRFKGWQSGLQGVRRDRWES*RINWQS Trigger: ACTCTGCCAGTTAATTCGCCAACTCTCCCACCTGTC...CCGCCTGACGCCTTGCAGTCCGCTCTGCCATCCTTTAAACCGCAGACCTAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTGGCCGAGCTCTTTCACCCTCTGCAGATCTTAGGCCTACTTCTCAGACATGCCGTCGACTCGCTCTaGTGGCTGAAAATGGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: TLAELFHPLQILGLLLRHAVDSL*WLKMVT Trigger: TGTTACCATTTTCAGCCACCAGAGCGAGTCGACGGC...ATGTCTGAGAAGTAGGCCTAAGATCTGCAGAGGGTGAAAGAGCTCGGCCAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR TCA 90 bp | AACAAAATTTTTGTTCAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGCGCCCAGCACCGGCTTaGGCTGCGCGAACACGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKIFVQWLFVNCQVHTTVRPAPA*AARTRA Trigger: AGCCCGTGTTCGCGCAGCTCAAGCCGGTGCTGGGCG...CACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTGAACAAAAATTTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR TCA 90 bp | ACCCTGGCCGAGCTCTTTCACCCTCTGCAGATCTTAGGCCTACTTCTCAGACATTGCCTTCAGTGTCAGTaGAGAACTGGTCTACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TLAELFHPLQILGLLLRHCLQCQ*RTGLPL Trigger: CAGTGGTAGACCAGTTCTTCACTGACACTGAAGGCA...ATGTCTGAGAAGTAGGCCTAAGATCTGCAGAGGGTGAAAGAGCTCGGCCAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGTGACAGGGCAAGGTCTCACTGGGGAAACCTCAGCCTTCCCGGAACCAGAATACTTTTTATGCTCTaGAATTATCGGAACTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGDRARSHWGNLSLPGTRILFML*NYRNWR Trigger: CCTCCAGTTCCGATAATTTCAGAGCATAAAAAGTAT...TCTGGTTCCGGGAAGGCTGAGGTTTCCCCAGTGAGACCTTGCCCTGTCACCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR GCA 90 bp | TTTTGTTCAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGTACCTCCCTTGGCATGGTGTACGTaGAAGGGGGCATGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FCSMAICELPGTHNRVPPLAWCT*KGACPG Trigger: TCCAGGGCATGCCCCCTTGCACGTACACCATGCCAA...GGGAGGTACACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTGAACAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | CAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGTACCTCCCATCTCTGATTTCACATCTTGTCTaGACCAGCTCCTCCGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QWLFVNCQVHTTVYLPSLISHLV*TSSSEG Trigger: GCCCTCGGAGGAGCTGGTCCAGACAAGATGTGAAAT...CAGAGATGGGAGGTACACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | CAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGTACCTCCCATCTCTGGCCGTCGACTCGCTCTaGTGGCTGAAAATGGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: QWLFVNCQVHTTVYLPSLAVDSL*WLKMVT Trigger: TGTTACCATTTTCAGCCACCAGAGCGAGTCGACGGC...CAGAGATGGGAGGTACACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGTACAAGCATTCAGAGCAGTAAACCCTGACAGGGTGGAAAGGCTATTTGGTGTATTCAACAGCTaGTACAGGTGGCCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQVQAFRAVNPDRVERLFGVFNS*YRWPCW Trigger: CCAGCAGGGCCACCTGTACCAGCTGTTGAATACACC...AAATAGCCTTTCCACCCTGTCAGGGTTTACTGCTCTGAATGCTTGTACCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAAATAAGGGAGGAGGCGGCAGAACAGCAGCCGAGTTATGCTTCTGATGTAGGCATAGGACGGAGGTaGGGTGAGATTCTGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKIREEAAEQQPSYASDVGIGRR*GEILQH Trigger: ATGCTGCAGAATCTCACCCCACCTCCGTCCTATGCC...TACATCAGAAGCATAACTCGGCTGCTGTTCTGCCGCCTCCTCCCTTATTTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAGGTACAAGCATTCAGAGCAGTAAACCCTGACAGGGTGGAAAGGCTATTTCAGTTCTCAGGTGAGTaGTGTCAGGGAGGAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: SQVQAFRAVNPDRVERLFQFSGE*CQGGRR Trigger: ACGTCTTCCTCCCTGACATCACTCACCTGAGAACTG...AAATAGCCTTTCCACCCTGTCAGGGTTTACTGCTCTGAATGCTTGTACCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR GCA 90 bp | AAATTCTACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACTGGTGGCGCTTCATGTaGAGCGCGAGGTGGTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KFYSSTAACSDICIGNYHWWRFM*SARWSE Trigger: CTCCGACCACCTCGCGCTGCACATGAAGCGCCACCA...GTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTAGAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGTACAAGCATTCAGAGCAGTAAACCCTGACAGGGTGGAAAGGCTATTTAACAGCAGAGGGGTGTaGGTTAAGGCCTGCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQVQAFRAVNPDRVERLFNSRGV*VKACHR Trigger: TCTATGGCAGGCCTTAACCCACACCCCTCTGCTGTT...AAATAGCCTTTCCACCCTGTCAGGGTTTACTGCTCTGAATGCTTGTACCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAGTTTGCTGGGATAAAGCTAGTGGTGAGCATGAGAGCAAGCTTCCAGCTTGGTGGGGTGAGATTCTaGAGCATCTCAGCTTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RKFAGIKLVVSMRASFQLGGVRF*SISACL Trigger: TAGACAAGCTGAGATGCTGCAGAATCTCACCCCACC...AAGCTGGAAGCTTGCTCTCATGCTCACCACTAGCTTTATCCCAGCAAACTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | CGGGTTTTAGGAAGTGTTAGGCATTCAGATAACCAAGCACTGCTCCCTCCTAACGTCGACTCGCTCTGGTaGCTGAAAATGGTAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVLGSVRHSDNQALLPPNVDSLW*LKMVTG Trigger: ACCTGTTACCATTTTCAGCCACCAGAGCGAGTCGAC...GTTAGGAGGGAGCAGTGCTTGGTTATCTGAATGCCTAACACTTCCTAAAACCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGTTTGCTGGGATAAAGCTAGTGGTGAGCATGAGAGCAAGCTTCCAGCTTTCTGGTTTGTCGAACTaGGCATGTCTAGATCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKFAGIKLVVSMRASFQLSGLSN*ACLDPV Trigger: CACCGGATCTAGACATGCCCAGTTCGACAAACCAGA...AAGCTGGAAGCTTGCTCTCATGCTCACCACTAGCTTTATCCCAGCAAACTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAAATAAGGGAGGAGGCGGCAGAACAGCAGCCGAGTTATGCTTCTGATGTAGTAGGTGGCCTGCTGTaGAAGAAACTGACTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKIREEAAEQQPSYASDVVGGLL*KKLTWH Trigger: ATGCCAAGTCAGTTTCTTCCACAGCAGGCCACCTAC...TACATCAGAAGCATAACTCGGCTGCTGTTCTGCCGCCTCCTCCCTTATTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR TCA 90 bp | AAATTCTACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACGGAACTGGAGGGAGCTaGGGGGTCAGATACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KFYSSTAACSDICIGNYHGTGGS*GVRYFS Trigger: GGAGAAGTATCTGACCCCTCAGCTCCCTCCAGTTCC...GTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTAGAATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR TCA 90 bp | CAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGTACCTCCCATCTCTGGGTAAATTTGGGTTGTaGATCGCCAGTTTGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QWLFVNCQVHTTVYLPSLGKFGL*IASLEA Trigger: TGCTTCCAAACTGGCGATTCACAACCCAAATTTACC...CAGAGATGGGAGGTACACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTAGGTCTGCGGTTTAAAGGATGGCAGAGCGGACTGCAAGGCGTCAGGCGGAGAGAGATGAAGATCTaGTATAGGAAGTTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLGLRFKGWQSGLQGVRRREMKI*YRKFLF Trigger: AAACAAGAACTTCCTATACCAGATCTTCATCTCTCT...CCGCCTGACGCCTTGCAGTCCGCTCTGCCATCCTTTAAACCGCAGACCTAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGTTTGCTGGGATAAAGCTAGTGGTGAGCATGAGAGCAAGCTTCCAGCTTTGGAAGAAACTGACTTaGCATGGTGTACGTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKFAGIKLVVSMRASFQLWKKLT*HGVRAR Trigger: CCTTGCACGTACACCATGCCAAGTCAGTTTCTTCCA...AAGCTGGAAGCTTGCTCTCATGCTCACCACTAGCTTTATCCCAGCAAACTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | CGGGTTTTAGGAAGTGTTAGGCATTCAGATAACCAAGCACTGCTCCCTCCTAACTGGAAGAAACTGACTTaGCATGGTGTACGTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVLGSVRHSDNQALLPPNWKKLT*HGVRAR Trigger: CCTTGCACGTACACCATGCCAAGTCAGTTTCTTCCA...GTTAGGAGGGAGCAGTGCTTGGTTATCTGAATGCCTAACACTTCCTAAAACCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR TCA 90 bp | CGGGTTTTAGGAAGTGTTAGGCATTCAGATAACCAAGCACTGCTCCCTCCTAACGGTAAATTTGGGTTGTaGATCGCCAGTTTGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVLGSVRHSDNQALLPPNGKFGL*IASLEA Trigger: TGCTTCCAAACTGGCGATTCACAACCCAAATTTACC...GTTAGGAGGGAGCAGTGCTTGGTTATCTGAATGCCTAACACTTCCTAAAACCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR CCA 90 bp | TACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACAATACAATTGTTCACCTCCTGTaGTGGCGCTGTGGTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSSTAACSDICIGNYHNTIVHLL*WRCGLV Trigger: CACCAGACCACAGCGCCACCACAGGAGGTGAACAAT...TGTATTGTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | TTATCAAAACTCAATTTCCATAGTAACCTCCAGCCTAGGGAGAGGCAAGTCCTCTCCATTACTGCCGTCTaGTTTGTCGAACTGGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSKLNFHSNLQPRERQVLSITAV*FVELGM Trigger: CATGCCCAGTTCGACAAACCAGACGGCAGTAATGGA...GAGGACTTGCCTCTCCCTAGGCTGGAGGTTACTATGGAAATTGAGTTTTGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAATAAGGGAGGAGGCGGCAGAACAGCAGCCGAGTTATGCTTCTGATGTAGTTGTATCTGACAGGTaGGAGAGTTGGCGAATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TKIREEAAEQQPSYASDVVVSDR*ESWRIN Trigger: GTTAATTCGCCAACTCTCCCACCTGTCAGATACAAC...TACATCAGAAGCATAACTCGGCTGCTGTTCTGCCGCCTCCTCCCTTATTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS-3UTR CCA 90 bp | CGGGTTTTAGGAAGTGTTAGGCATTCAGATAACCAAGCACTGCTCCCTCCTAACGTTGTATCTGACAGGTaGGAGAGTTGGCGAATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RVLGSVRHSDNQALLPPNVVSDR*ESWRIN Trigger: GTTAATTCGCCAACTCTCCCACCTGTCAGATACAAC...GTTAGGAGGGAGCAGTGCTTGGTTATCTGAATGCCTAACACTTCCTAAAACCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR TCA 90 bp | AAATTCTACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACCAGTTCTCAGGTGAGTaGTGTCAGGGAGGAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: KFYSSTAACSDICIGNYHQFSGE*CQGGRR Trigger: ACGTCTTCCTCCCTGACATCACTCACCTGAGAACTG...GTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTAGAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAAAATCCGCATAAATTGTCATTTCGCCAACAGCACTGCATGAGCAAACATTCCTTCTGTTGTATCTaGCAGGTGGGAGAGTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CKNPHKLSFRQQHCMSKHSFCCI*QVGELA Trigger: CGCCAACTCTCCCACCTGTCAGATACAACAGAAGGA...ATGTTTGCTCATGCAGTGCTGTTGGCGAAATGACAATTTATGCGGATTTTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS-3UTR CCA 90 bp | AACAAAATTTTTGTTCAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGGGTGTATTCAACAGCTaGTACAGGTGGCCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKIFVQWLFVNCQVHTTVGVFNS*YRWPCW Trigger: CCAGCAGGGCCACCTGTACCAGCTGTTGAATACACC...CACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTGAACAAAAATTTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | AAATTCTACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACAACAGCAGAGGGGTGTaGGTTAAGGCCTGCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KFYSSTAACSDICIGNYHNSRGV*VKACHR Trigger: TCTATGGCAGGCCTTAACCCACACCCCTCTGCTGTT...GTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTAGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS-3UTR CCA 90 bp | AAATTCTACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACGAAACTGACTTGGCATaGTGTACGTGCAAGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KFYSSTAACSDICIGNYHETDLA*CTCKGA Trigger: TGCCCCCTTGCACGTACACCATGCCAAGTCAGTTTC...GTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTAGAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS-3UTR CCA 90 bp | AAACATCTTGGAGCCTTACAAAACTATTTACACCATTTGTCGCCTATTTACACGCGGGAGAAGCTGCGTTaGCACACCATGCACTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KHLGALQNYLHHLSPIYTREKLR*HTMHWN Trigger: GTTCCAGTGCATGGTGTGCCAACGCAGCTTCTCCCG...CGTGTAAATAGGCGACAAATGGTGTAAATAGTTTTGTAAGGCTCCAAGATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR TCA 90 bp | AAATTCTACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACTGCCTTCAGTGTCAGTaGAGAACTGGTCTACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KFYSSTAACSDICIGNYHCLQCQ*RTGLPL Trigger: CAGTGGTAGACCAGTTCTTCACTGACACTGAAGGCA...GTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTAGAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR TCA 90 bp | TTATCAAAACTCAATTTCCATAGTAACCTCCAGCCTAGGGAGAGGCAAGTCCTCGAAGGGACAGAGAGATaGAGATCTGGTATAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSKLNFHSNLQPRERQVLEGTER*RSGIGS Trigger: ACTTCCTATACCAGATCTTCATCTCTCTGTCCCTTC...GAGGACTTGCCTCTCCCTAGGCTGGAGGTTACTATGGAAATTGAGTTTTGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR CCA 90 bp | AAATTCTACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACGTCGACTCGCTCTGGTaGCTGAAAATGGTAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KFYSSTAACSDICIGNYHVDSLW*LKMVTG Trigger: ACCTGTTACCATTTTCAGCCACCAGAGCGAGTCGAC...GTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTAGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR CCA 90 bp | AATGTTCCTAAACTACTTCTGTTTCTCCTCTTGATCCAAAGCTCAAAACCCCATGAAACTGACTTGGCATaGTGTACGTGCAAGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NVPKLLLFLLLIQSSKPHETDLA*CTCKGA Trigger: TGCCCCCTTGCACGTACACCATGCCAAGTCAGTTTC...ATGGGGTTTTGAGCTTTGGATCAAGAGGAGAAACAGAAGTAGTTTAGGAACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR CCA 90 bp | AAACTACTTCTGTTTCTCCTCTTGATCCAAAGCTCAAAACCCCATGTTCAGTGTGTAGGTGGCCTGCTGTaGAAGAAACTGACTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLLLFLLLIQSSKPHVQCVGGLL*KKLTWH Trigger: ATGCCAAGTCAGTTTCTTCCACAGCAGGCCACCTAC...ACACTGAACATGGGGTTTTGAGCTTTGGATCAAGAGGAGAAACAGAAGTAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR TCA 90 bp | AACAAAATTTTTGTTCAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGGAACTGGTCTACCACTaGGGCACTGTCTCGTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: NKIFVQWLFVNCQVHTTVELVYH*GTVSSI Trigger: TATAGACGAGACAGTGCCTCAGTGGTAGACCAGTTC...CACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTGAACAAAAATTTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAAAATCCGCATAAATTGTCATTTCGCCAACAGCACTGCATGAGCAAACATCTGGAACTGTTTCATTaGCGTCTGTGGAACAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CKNPHKLSFRQQHCMSKHLELFH*RLWNSR Trigger: TCTGCTGTTCCACAGACGTCAATGAAACAGTTCCAG...ATGTTTGCTCATGCAGTGCTGTTGGCGAAATGACAATTTATGCGGATTTTTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR TCA 90 bp | TACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACAATACAGGAAGACGTTCATGTTaGTGCTGTAAGGTATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSSTAACSDICIGNYHNTGRRSC*CCKVCL Trigger: AAGGCATACCTTACAGCATCAACATGAACGTCTTCC...TGTATTGTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR TCA 90 bp | AAACATCTTGGAGCCTTACAAAACTATTTACACCATTTGTCGCCTATTTACACGTGCTGTGGAAGAAACTaGCTTGGCATGGTGTACGTG | + |
|
Preference number: 4 (lower is better) Translates to: KHLGALQNYLHHLSPIYTCCGRN*LGMVYV Trigger: CACGTACACCATGCCAAGTCAGTTTCTTCCACAGCA...CGTGTAAATAGGCGACAAATGGTGTAAATAGTTTTGTAAGGCTCCAAGATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTTCCCTAACACTAGTCTACAAAAGGACATTTTAGTAGGTTGCTTTAGTTGCTGTGGAAGAAACTaGCTTGGCATGGTGTACGTG | + |
|
Preference number: 4 (lower is better) Translates to: QCFPNTSLQKDILVGCFSCCGRN*LGMVYV Trigger: CACGTACACCATGCCAAGTCAGTTTCTTCCACAGCA...ACTAAAGCAACCTACTAAAATGTCCTTTTGTAGACTAGTGTTAGGGAAACACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR CCA 90 bp | AAATTCTACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACGATCTGTGTTACGCATaGTCTCTGGGATTTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KFYSSTAACSDICIGNYHDLCYA*SLGFVE Trigger: CTCTACAAATCCCAGAGACCATGCGTAACACAGATC...GTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTAGAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| 3UTR CAA 72 bp | GTCTCACTGGATAGTACATGCAAAAATCCGCATAAATaGTCATTTCGCCAACAGCACTGCATGAGCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: VSLDSTCKNPHK*SFRQQHCMSKH Trigger: ATGTTTGCTCATGCAGTGCTGTTGGCGAAATGACAATTTATGCGGATTTTTGCATGTACTATCCAGTGAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR GCA 90 bp | AACAAAATTTTTGTTCAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGGTGTGGGTTAAGGCCTaGCATAGAAACATTAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NKIFVQWLFVNCQVHTTVVWVKA*HRNIKG Trigger: ACCCTTAATGTTTCTATGGCAGGCCTTAACCCACAC...CACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTGAACAAAAATTTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS-3UTR TCA 90 bp | AAACATCTTGGAGCCTTACAAAACTATTTACACCATTTGTCGCCTATTTACACGGAAGGGACAGAGAGATaGAGATCTGGTATAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KHLGALQNYLHHLSPIYTEGTER*RSGIGS Trigger: ACTTCCTATACCAGATCTTCATCTCTCTGTCCCTTC...CGTGTAAATAGGCGACAAATGGTGTAAATAGTTTTGTAAGGCTCCAAGATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| 3UTR CAA 72 bp | TTCTATATGGACTCTTCTGGCACCTGTCAACTCTATTaGGGAGGTTTTAGACTGGAGTTTGAATCATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FYMDSSGTCQLY*GGFRLEFESSL Trigger: CAAAGATGATTCAAACTCCAGTCTAAAACCTCCCAAATAGAGTTGACAGGTGCCAGAAGAGTCCATATAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR CAA 72 bp | AGCTCAAATGTTCCTAAACTACTTCTGTTTCTCCTCTaGATCCAAAGCTCAAAACCCCATGTTCAGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSNVPKLLLFLL*IQSSKPHVQCF Trigger: GAAACACTGAACATGGGGTTTTGAGCTTTGGATCAAGAGGAGAAACAGAAGTAGTTTAGGAACATTTGAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| CDS-3UTR TCA 90 bp | AACAAAATTTTTGTTCAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGATACTTTTTATGCTCTaGAATTATCGGAACTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKIFVQWLFVNCQVHTTVILFML*NYRNWR Trigger: CCTCCAGTTCCGATAATTTCAGAGCATAAAAAGTAT...CACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTGAACAAAAATTTTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS-3UTR CCA 90 bp | AAACTACTTCTGTTTCTCCTCTTGATCCAAAGCTCAAAACCCCATGTTCAGTGTAGAGAGATGAAGATCTaGTATAGGAAGTTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLLLFLLLIQSSKPHVQCREMKI*YRKFLF Trigger: AAACAAGAACTTCCTATACCAGATCTTCATCTCTCT...ACACTGAACATGGGGTTTTGAGCTTTGGATCAAGAGGAGAAACAGAAGTAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| 3UTR CAA 72 bp | AAACATCTTGGAGCCTTACAAAACTATTTACACCATTaGTCGCCTATTTACACGTTGAGAAGCAACTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KHLGALQNYLHH*SPIYTLRSNFS Trigger: AGAAAAGTTGCTTCTCAACGTGTAAATAGGCGACAAATGGTGTAAATAGTTTTGTAAGGCTCCAAGATGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS TCA 90 bp | AGAGCGCCGCGTCGCGGGCCGGGTTCGCAGCGCCCAGCACCGGCTTaGGCTGCGCGAACACGGGCTCGTCCTGCGCGGCCGGCGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RAPRRGPGSQRPAPA*AARTRARPARPAAG Trigger: CCCAGCCGCCGGCCGCGCAGGACGAGCCCGTGTTCGCGCAGCTCAAGCCGGTGCTGGGCGCTGCGAACCCGGCCCGCGACGCGGCGCTCT 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS GCA 90 bp | GCCGCGTCGCGGGCCGGGTTCGCAGCGCCCAGCACCGGCTTGAGCTaGGCGAACACGGGCTCGTCCTGCGCGGCCGGCGGCTGGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: AASRAGFAAPSTGLS*ANTGSSCAAGGWGS Trigger: ACTGCCCCAGCCGCCGGCCGCGCAGGACGAGCCCGTGTTCGCGCAGCTCAAGCCGGTGCTGGGCGCTGCGAACCCGGCCCGCGACGCGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS GCA 90 bp | GCAGCGCCCAGCACCGGCTTGAGCTGCGCGAACACGGGCTCGTCCTaGGCGGCCGGCGGCTGGGGCAGTGGTCCCAGGCGGGCGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: AAPSTGLSCANTGSS*AAGGWGSGPRRALM Trigger: CATGAGCGCCCGCCTGGGACCACTGCCCCAGCCGCCGGCCGCGCAGGACGAGCCCGTGTTCGCGCAGCTCAAGCCGGTGCTGGGCGCTGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS CCA 90 bp | GGCTTGAGCTGCGCGAACACGGGCTCGTCCTGCGCGGCCGGCGGCTaGGGCAGTGGTCCCAGGCGGGCGCTCATGGTCAGCACCCGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLSCANTGSSCAAGG*GSGPRRALMVSTRV Trigger: CACGCGGGTGCTGACCATGAGCGCCCGCCTGGGACCACTGCCCCAGCCGCCGGCCGCGCAGGACGAGCCCGTGTTCGCGCAGCTCAAGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS CCA 90 bp | TCCGAGGGCAGTCGCGGGCCAGCGGCTGGCGGCGGCGCAGGCGGGTaGTGGTGCGCGTGTTTCAGATCGTCTCCGGAGAAGAGCGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SEGSRGPAAGGGAGG*WCACFRSSPEKSAA Trigger: CGCGGCGCTCTTCTCCGGAGACGATCTGAAACACGCGCACCACCACCCGCCTGCGCCGCCGCCAGCCGCTGGCCCGCGACTGCCCTCGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS CCA 90 bp | TCTTGTCTGGACCAGCTCCTCCGAGGGCAGTCGCGGGCCAGCGGCTaGCGGCGGCGCAGGCGGGTGGTGGTGCGCGTGTTTCAGATCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SCLDQLLRGQSRASG*RRRRRVVVRVFQIV Trigger: GACGATCTGAAACACGCGCACCACCACCCGCCTGCGCCGCCGCCAGCCGCTGGCCCGCGACTGCCCTCGGAGGAGCTGGTCCAGACAAGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS-3UTR CAA 90 bp | AAGTTAGGTCTGCGGTTTAAAGGATGGCAGAGCGGACTGCAAGGCGTCAGGCGGATGCACTGGAACGGCTaGGCGCCCGTGTGCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KLGLRFKGWQSGLQGVRRMHWNG*APVCFL Trigger: CAGGAAGCACACGGGCGCCAAGCCGTTCCAGTGCAT...CCGCCTGACGCCTTGCAGTCCGCTCTGCCATCCTTTAAACCGCAGACCTAACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS TCA 90 bp | TGGCATGGTGTACGTGCAAGGGGGCATGCCCTGGAACTGTTTCATTaGCGTCTGTGGAACAGCAGAGGGGTGTGGGTTAAGGCCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: WHGVRARGHALELFH*RLWNSRGVWVKACH Trigger: ATGGCAGGCCTTAACCCACACCCCTCTGCTGTTCCACAGACGTCAATGAAACAGTTCCAGGGCATGCCCCCTTGCACGTACACCATGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
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| CDS-3UTR CAA 90 bp | GCACCCCCACCGGTTCCCCATGCTGAGATGCGGCTGCCTGTCTGGAGAGGAAGTGTAACAGGTTCTGTCTaGATCTGTGTTACGCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: APPPVPHAEMRLPVWRGSVTGSV*ICVTHG Trigger: ACCATGCGTAACACAGATCAAGACAGAACCTGTTAC...ACTTCCTCTCCAGACAGGCAGCCGCATCTCAGCATGGGGAACCGGTGGGGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS-3UTR CAA 90 bp | GCACCCCCACCGGTTCCCCATGCTGAGATGCGGCTGCCTGTCTGGAGAGGAAGTTGTTTGATGAAGATATaGTTCACCTCCTGTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: APPPVPHAEMRLPVWRGSCLMKI*FTSCGG Trigger: GCCACCACAGGAGGTGAACAATATCTTCATCAAACA...ACTTCCTCTCCAGACAGGCAGCCGCATCTCAGCATGGGGAACCGGTGGGGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS CCA 90 bp | TTGATGAAGATATTGTTCACCTCCTGTGGTGGCGCTGTGGTCTGGTaGGAGCTGAAGATACTAGTGAACTCGGGGAGAGCCTGGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LMKILFTSCGGAVVW*ELKILVNSGRAWVG Trigger: CCCCACCCAGGCTCTCCCCGAGTTCACTAGTATCTTCAGCTCCCACCAGACCACAGCGCCACCACAGGAGGTGAACAATATCTTCATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
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| CDS GCA 90 bp | GCTGTGGAAGAAACTGACTTGGCATGGTGTACGTGCAAGGGGGCATaGCCTGGAACTGTTTCATTGACGTCTGTGGAACAGCAGAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AVEETDLAWCTCKGA*PGTVSLTSVEQQRG Trigger: ACCCCTCTGCTGTTCCACAGACGTCAATGAAACAGTTCCAGGGCATGCCCCCTTGCACGTACACCATGCCAAGTCAGTTTCTTCCACAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
||
| CDS-3UTR CAA 90 bp | AAATTCTACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACGCGCCCAGCACCGGCTaGAGCTGCGCGAACACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KFYSSTAACSDICIGNYHAPSTG*SCANTG Trigger: GCCCGTGTTCGCGCAGCTCAAGCCGGTGCTGGGCGC...GTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTAGAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
||
| CDS CCA 90 bp | TGTTTGATGAAGATATTGTTCACCTCCTGTGGTGGCGCTGTGGTCTaGTGGGAGCTGAAGATACTAGTGAACTCGGGGAGAGCCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CLMKILFTSCGGAVV*WELKILVNSGRAWV Trigger: CACCCAGGCTCTCCCCGAGTTCACTAGTATCTTCAGCTCCCACCAGACCACAGCGCCACCACAGGAGGTGAACAATATCTTCATCAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
||
| CDS CCA 90 bp | GTGAATCGCCAGTTTGGAAGCAATTGTAGCGGCATAGGACGGAGGTaGGGTGAGATTCTGCAGCATCTCAGCTTGTCTATCGGGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VNRQFGSNCSGIGRR*GEILQHLSLSIGTS Trigger: GGAAGTCCCGATAGACAAGCTGAGATGCTGCAGAATCTCACCCCACCTCCGTCCTATGCCGCTACAATTGCTTCCAAACTGGCGATTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTGGCCGAGCTCTTTCACCCTCTGCAGATCTTAGGCCTACTTCTCAGACATGTGGAAGAAACTGACTaGGCATGGTGTACGTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TLAELFHPLQILGLLLRHVEETD*AWCTCK Trigger: CTTGCACGTACACCATGCCAAGTCAGTTTCTTCCAC...ATGTCTGAGAAGTAGGCCTAAGATCTGCAGAGGGTGAAAGAGCTCGGCCAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGGTACAAGCATTCAGAGCAGTAAACCCTGACAGGGTGGAAAGGCTATTTTTCCAGGCTCTGAGCTaGGTGGTGACGGGGGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQVQAFRAVNPDRVERLFFQALS*VVTGES Trigger: ACTTTCCCCCGTCACCACCAAGCTCAGAGCCTGGAA...AAATAGCCTTTCCACCCTGTCAGGGTTTACTGCTCTGAATGCTTGTACCTGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR CAA 90 bp | CGGGTTTTAGGAAGTGTTAGGCATTCAGATAACCAAGCACTGCTCCCTCCTAACTTACTGCCGTCTGGTTaGTCGAACTGGGCATGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: RVLGSVRHSDNQALLPPNLLPSG*SNWACL Trigger: TAGACATGCCCAGTTCGACAAACCAGACGGCAGTAA...GTTAGGAGGGAGCAGTGCTTGGTTATCTGAATGCCTAACACTTCCTAAAACCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
||
| CDS-3UTR CAA 90 bp | AAATTCTACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACGCGGGAGAAGCTGCGTaGGCACACCATGCACTGGAA | + |
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Preference number: 5 (lower is better) Translates to: KFYSSTAACSDICIGNYHAGEAA*AHHALE Trigger: TTCCAGTGCATGGTGTGCCAACGCAGCTTCTCCCGC...GTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTAGAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS CCA 90 bp | GTGGCTGAAAATGGTAACAGGTTCTGTCTTGATCTGTGTTACGCATaGTCTCTGGGATTTGTAGAGGCCAGTTCTCAGGTGAGTGATGTC | + |
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Preference number: 5 (lower is better) Translates to: VAENGNRFCLDLCYA*SLGFVEASSQVSDV Trigger: GACATCACTCACCTGAGAACTGGCCTCTACAAATCCCAGAGACCATGCGTAACACAGATCAAGACAGAACCTGTTACCATTTTCAGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
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| CDS CCA 90 bp | TTAAGGCCTGCCATAGAAACATTAAGGGTGTCCATTACTGCCGTCTaGTTTGTCGAACTGGGCATGTCTAGATCCGGTGTATTCAACAGC | + |
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Preference number: 5 (lower is better) Translates to: LRPAIETLRVSITAV*FVELGMSRSGVFNS Trigger: GCTGTTGAATACACCGGATCTAGACATGCCCAGTTCGACAAACCAGACGGCAGTAATGGACACCCTTAATGTTTCTATGGCAGGCCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
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| CDS-3UTR CAA 90 bp | TTTTGTTCAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGTACCTCCCTTACTGCCGTCTGGTTaGTCGAACTGGGCATGTCTA | + |
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Preference number: 5 (lower is better) Translates to: FCSMAICELPGTHNRVPPLLPSG*SNWACL Trigger: TAGACATGCCCAGTTCGACAAACCAGACGGCAGTAA...GGGAGGTACACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTGAACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS-3UTR CAA 90 bp | TACAGCTCGACAGCTGCTTGCTCTGATATTTGCATAGGAAATTACCACAATACATTCCAGGCTCTGAGCTaGGTGGTGACGGGGGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: YSSTAACSDICIGNYHNTFQALS*VVTGES Trigger: ACTTTCCCCCGTCACCACCAAGCTCAGAGCCTGGAA...TGTATTGTGGTAATTTCCTATGCAAATATCAGAGCAAGCAGCTGTCGAGCTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS-3UTR CAA 90 bp | CGGGTTTTAGGAAGTGTTAGGCATTCAGATAACCAAGCACTGCTCCCTCCTAACGTAACAGGTTCTGTCTaGATCTGTGTTACGCATGGT | + |
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Preference number: 5 (lower is better) Translates to: RVLGSVRHSDNQALLPPNVTGSV*ICVTHG Trigger: ACCATGCGTAACACAGATCAAGACAGAACCTGTTAC...GTTAGGAGGGAGCAGTGCTTGGTTATCTGAATGCCTAACACTTCCTAAAACCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| CDS-3UTR CAA 90 bp | TGCAAAAATCCGCATAAATTGTCATTTCGCCAACAGCACTGCATGAGCAAACATTCTCCATTTCACATCTaGTCTGGACCAGCTCCTCCG | + |
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Preference number: 5 (lower is better) Translates to: CKNPHKLSFRQQHCMSKHSPFHI*SGPAPP Trigger: CGGAGGAGCTGGTCCAGACAAGATGTGAAATGGAGA...ATGTTTGCTCATGCAGTGCTGTTGGCGAAATGACAATTTATGCGGATTTTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS-3UTR CAA 90 bp | AACAAAATTTTTGTTCAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGCTGCAGCATCTCAGCTaGTCTATCGGGACTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: NKIFVQWLFVNCQVHTTVLQHLS*SIGTSR Trigger: CCTGGAAGTCCCGATAGACAAGCTGAGATGCTGCAG...CACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTGAACAAAAATTTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS-3UTR CAA 90 bp | AATGTTCCTAAACTACTTCTGTTTCTCCTCTTGATCCAAAGCTCAAAACCCCATCTGCAGCATCTCAGCTaGTCTATCGGGACTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: NVPKLLLFLLLIQSSKPHLQHLS*SIGTSR Trigger: CCTGGAAGTCCCGATAGACAAGCTGAGATGCTGCAG...ATGGGGTTTTGAGCTTTGGATCAAGAGGAGAAACAGAAGTAGTTTAGGAACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226784.2 |
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| CDS-3UTR CAA 90 bp | AACAAAATTTTTGTTCAATGGCTATTTGTGAACTGCCAGGTACACACAACCGTGGTGGAAGAAACTGACTaGGCATGGTGTACGTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: NKIFVQWLFVNCQVHTTVVEETD*AWCTCK Trigger: CTTGCACGTACACCATGCCAAGTCAGTTTCTTCCAC...CACGGTTGTGTGTACCTGGCAGTTCACAAATAGCCATTGAACAAAAATTTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS GCA 72 bp | CGGGCCGGGTTCGCAGCGCCCAGCACCGGCTTGAGCTaGGCGAACACGGGCTCGTCCTGCGCGGCCGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: RAGFAAPSTGLS*ANTGSSCAAGG Trigger: GCCGCCGGCCGCGCAGGACGAGCCCGTGTTCGCGCAGCTCAAGCCGGTGCTGGGCGCTGCGAACCCGGCCCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS CAA 90 bp | AAGAGCGCCGCGTCGCGGGCCGGGTTCGCAGCGCCCAGCACCGGCTaGAGCTGCGCGAACACGGGCTCGTCCTGCGCGGCCGGCGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: KSAASRAGFAAPSTG*SCANTGSSCAAGGW Trigger: CCAGCCGCCGGCCGCGCAGGACGAGCCCGTGTTCGCGCAGCTCAAGCCGGTGCTGGGCGCTGCGAACCCGGCCCGCGACGCGGCGCTCTT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS TCA 72 bp | CGTCGCGGGCCGGGTTCGCAGCGCCCAGCACCGGCTTaGGCTGCGCGAACACGGGCTCGTCCTGCGCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: RRGPGSQRPAPA*AARTRARPARP Trigger: CGGCCGCGCAGGACGAGCCCGTGTTCGCGCAGCTCAAGCCGGTGCTGGGCGCTGCGAACCCGGCCCGCGACG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS CCA 72 bp | CACGGGCTCGTCCTGCGCGGCCGGCGGCTGGGGCAGTaGTCCCAGGCGGGCGCTCATGGTCAGCACCCGCGT | + |
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Preference number: 6 (lower is better) Translates to: HGLVLRGRRLGQ*SQAGAHGQHPR Trigger: ACGCGGGTGCTGACCATGAGCGCCCGCCTGGGACCACTGCCCCAGCCGCCGGCCGCGCAGGACGAGCCCGTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS CAA 72 bp | GCGTCGCGGGCCGGGTTCGCAGCGCCCAGCACCGGCTaGAGCTGCGCGAACACGGGCTCGTCCTGCGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: ASRAGFAAPSTG*SCANTGSSCAA Trigger: GGCCGCGCAGGACGAGCCCGTGTTCGCGCAGCTCAAGCCGGTGCTGGGCGCTGCGAACCCGGCCCGCGACGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS GCA 72 bp | AGCACCGGCTTGAGCTGCGCGAACACGGGCTCGTCCTaGGCGGCCGGCGGCTGGGGCAGTGGTCCCAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: STGLSCANTGSS*AAGGWGSGPRR Trigger: CCGCCTGGGACCACTGCCCCAGCCGCCGGCCGCGCAGGACGAGCCCGTGTTCGCGCAGCTCAAGCCGGTGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS CCA 72 bp | TGCGCGAACACGGGCTCGTCCTGCGCGGCCGGCGGCTaGGGCAGTGGTCCCAGGCGGGCGCTCATGGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: CANTGSSCAAGG*GSGPRRALMVS Trigger: GCTGACCATGAGCGCCCGCCTGGGACCACTGCCCCAGCCGCCGGCCGCGCAGGACGAGCCCGTGTTCGCGCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS GCA 72 bp | GGGCCAGCGGCTGGCGGCGGCGCAGGCGGGTGGTGGTaGGCGTGTTTCAGATCGTCTCCGGAGAAGAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: GPAAGGGAGGWW*ACFRSSPEKSA Trigger: GGCGCTCTTCTCCGGAGACGATCTGAAACACGCGCACCACCACCCGCCTGCGCCGCCGCCAGCCGCTGGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005279.8 |
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| CDS TCA 72 bp | GTACGTGCAAGGGGGCATGCCCTGGAACTGTTTCATTaGCGTCTGTGGAACAGCAGAGGGGTGTGGGTTAAG | + |
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Preference number: 6 (lower is better) Translates to: VRARGHALELFH*RLWNSRGVWVK Trigger: CTTAACCCACACCCCTCTGCTGTTCCACAGACGTCAATGAAACAGTTCCAGGGCATGCCCCCTTGCACGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
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| CDS CCA 72 bp | ATATTGTTCACCTCCTGTGGTGGCGCTGTGGTCTGGTaGGAGCTGAAGATACTAGTGAACTCGGGGAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: ILFTSCGGAVVW*ELKILVNSGRA Trigger: GGCTCTCCCCGAGTTCACTAGTATCTTCAGCTCCCACCAGACCACAGCGCCACCACAGGAGGTGAACAATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
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| CDS CCA 72 bp | GAACTGGGCATGTCTAGATCCGGTGTATTCAACAGCTaGTACAGGTGGCCCTGCTGGGAAGGGACAGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: ELGMSRSGVFNS*YRWPCWEGTER Trigger: TCTCTCTGTCCCTTCCCAGCAGGGCCACCTGTACCAGCTGTTGAATACACCGGATCTAGACATGCCCAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
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| CDS GCA 72 bp | CCTGCTGTGGAAGAAACTGACTTGGCATGGTGTACGTaGAAGGGGGCATGCCCTGGAACTGTTTCATTGACG | + |
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Preference number: 6 (lower is better) Translates to: PAVEETDLAWCT*KGACPGTVSLT Trigger: CGTCAATGAAACAGTTCCAGGGCATGCCCCCTTGCACGTACACCATGCCAAGTCAGTTTCTTCCACAGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
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| CDS GCA 72 bp | CGTCTGTGGAACAGCAGAGGGGTGTGGGTTAAGGCCTaGCATAGAAACATTAAGGGTGTCCATTACTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: RLWNSRGVWVKA*HRNIKGVHYCR Trigger: ACGGCAGTAATGGACACCCTTAATGTTTCTATGGCAGGCCTTAACCCACACCCCTCTGCTGTTCCACAGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
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| CDS GCA 72 bp | GAAACTGACTTGGCATGGTGTACGTGCAAGGGGGCATaGCCTGGAACTGTTTCATTGACGTCTGTGGAACAG | + |
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Preference number: 6 (lower is better) Translates to: ETDLAWCTCKGA*PGTVSLTSVEQ Trigger: CTGTTCCACAGACGTCAATGAAACAGTTCCAGGGCATGCCCCCTTGCACGTACACCATGCCAAGTCAGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
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| CDS CCA 72 bp | AAGATATTGTTCACCTCCTGTGGTGGCGCTGTGGTCTaGTGGGAGCTGAAGATACTAGTGAACTCGGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: KILFTSCGGAVV*WELKILVNSGR Trigger: TCTCCCCGAGTTCACTAGTATCTTCAGCTCCCACCAGACCACAGCGCCACCACAGGAGGTGAACAATATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
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| CDS CAA 90 bp | CAGAAGTGGATACGTCGCTTCTCCAGATCCGGGTTACTCCTTCTGTaGTATCTGACAGGTGGGAGAGTTGGCGAATTAACTGGCAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: QKWIRRFSRSGLLLL*YLTGGRVGELTGRV Trigger: CACTCTGCCAGTTAATTCGCCAACTCTCCCACCTGTCAGATACAACAGAAGGAGTAACCCGGATCTGGAGAAGCGACGTATCCACTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
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| CDS CCA 72 bp | CAGTTTGGAAGCAATTGTAGCGGCATAGGACGGAGGTaGGGTGAGATTCTGCAGCATCTCAGCTTGTCTATC | + |
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Preference number: 6 (lower is better) Translates to: QFGSNCSGIGRR*GEILQHLSLSI Trigger: GATAGACAAGCTGAGATGCTGCAGAATCTCACCCCACCTCCGTCCTATGCCGCTACAATTGCTTCCAAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
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| CDS CCA 72 bp | GCCATAGAAACATTAAGGGTGTCCATTACTGCCGTCTaGTTTGTCGAACTGGGCATGTCTAGATCCGGTGTA | + |
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Preference number: 6 (lower is better) Translates to: AIETLRVSITAV*FVELGMSRSGV Trigger: TACACCGGATCTAGACATGCCCAGTTCGACAAACCAGACGGCAGTAATGGACACCCTTAATGTTTCTATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005279.8 ENSMUST00000226784.2 |
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