Pregenerated sensors for KLF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029178Ensembl transcript IDs: ENSMUST00000165536.8, ENSMUST00000166409.6, ENSMUST00000197879.2, ENSMUST00000198946.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGCCCCCACAACTATGAACATAGTGCCATCAAATCAAGTTCCCTaGAAGTGCAGGGCTCCAAGACCTCTCACTCCCCGACATCCAAGA | + |
|
Preference number: 1 (lower is better) Translates to: AAPTTMNIVPSNQVP*KCRAPRPLTPRHPR Trigger: TCTTGGATGTCGGGGAGTGAGAGGTCTTGGAGCCCTGCACTTGCAGGGAACTTGATTTGATGGCACTATGTTCATAGTTGTGGGGGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR CCA 90 bp | ACTCCCTCCTCCATTTCCAATATCTTCTCCTTCTTCCTCACACTATaGGAGCACATGGCCCACCTAAGGCAACAGCTCCTGCTCAGCTCC | + |
|
Preference number: 1 (lower is better) Translates to: TPSSISNIFSFFLTL*EHMAHLRQQLLLSS Trigger: GGAGCTGAGCAGGAGCTGTTGCCTTAGGTGGGCCATGTGCTCCCATAGTGTGAGGAAGAAGGAGAAGATATTGGAAATGGAGGAGGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR TCA 90 bp | ATTTCCCAGATGTTGATGGTCCAGCCGGTCCTAGCCAGGAATCGCTaGCTCCCTCCTCCATTTCCAATATCTTCTCCTTCTTCCTCACAC | + |
|
Preference number: 1 (lower is better) Translates to: ISQMLMVQPVLARNR*LPPPFPISSPSSSH Trigger: GTGTGAGGAAGAAGGAGAAGATATTGGAAATGGAGGAGGGAGTCAGCGATTCCTGGCTAGGACCGGCTGGACCATCAACATCTGGGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR GCA 90 bp | CCCACAACTATGAACATAGTGCCATCAAATCAAGTTCCCTGCAAGTaGAGGGCTCCAAGACCTCTCACTCCCCGACATCCAAGAACAATC | + |
|
Preference number: 1 (lower is better) Translates to: PTTMNIVPSNQVPCK*RAPRPLTPRHPRTI Trigger: GATTGTTCTTGGATGTCGGGGAGTGAGAGGTCTTGGAGCCCTGCACTTGCAGGGAACTTGATTTGATGGCACTATGTTCATAGTTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR CCA 90 bp | TGGCACCATACAGCTCACACAGAAAAGCTCCATATGAAAGCTATGTaGCTCATTGGATATGGGAGTATTAGTACCACTCAATGTTTTCCT | + |
|
Preference number: 1 (lower is better) Translates to: WHHTAHTEKLHMKAM*LIGYGSISTTQCFP Trigger: AGGAAAACATTGAGTGGTACTAATACTCCCATATCCAATGAGCCACATAGCTTTCATATGGAGCTTTTCTGTGTGAGCTGTATGGTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR TCA 90 bp | TGCTGGCTTCATGTTTACAGCCTGTCCTCATCAATTTACTGCAAATaGACCACCACTGACAAGAACATAGCATGTCATCCAAAATCAAAC | + |
|
Preference number: 1 (lower is better) Translates to: CWLHVYSLSSSIYCK*TTTDKNIACHPKSN Trigger: GTTTGATTTTGGATGACATGCTATGTTCTTGTCAGTGGTGGTTCATTTGCAGTAAATTGATGAGGACAGGCTGTAAACATGAAGCCAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR TCA 90 bp | TTCTTAGTTGAACAAAGCTATGCTACACACAGTCTCCAAACCAAGTaGCTTTCGAGTGCAAAATGCCCATTTAATGATGTACCCTTCCCA | + |
|
Preference number: 1 (lower is better) Translates to: FLVEQSYATHSLQTK*LSSAKCPFNDVPFP Trigger: TGGGAAGGGTACATCATTAAATGGGCATTTTGCACTCGAAAGTCACTTGGTTTGGAGACTGTGTGTAGCATAGCTTTGTTCAACTAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR TCA 90 bp | ACACTAGGTATATTTACAAATAGTGTCACTCAGGTCTTAATTGAGTaGCTCTGCTCAAGCTTAGTGGATGCTCTTTTATACTATGTGTCA | + |
|
Preference number: 1 (lower is better) Translates to: TLGIFTNSVTQVLIE*LCSSLVDALLYYVS Trigger: TGACACATAGTATAAAAGAGCATCCACTAAGCTTGAGCAGAGTCACTCAATTAAGACCTGAGTGACACTATTTGTAAATATACCTAGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR TCA 90 bp | GTATATGAGGACTGTACAGTACAAATTTATGTTCACAGTTTGACATaGCAAAATGTCATTACTGAATTCCCATTGGACTACAGGGTAGAA | + |
|
Preference number: 1 (lower is better) Translates to: VYEDCTVQIYVHSLT*QNVITEFPLDYRVE Trigger: TTCTACCCTGTAGTCCAATGGGAATTCAGTAATGACATTTTGTCATGTCAAACTGTGAACATAAATTTGTACTGTACAGTCCTCATATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTCCTTCCTTGCACCCTACCCCGCTGCTCACTGGGTCGGAGCATACAAATTGGTTCTTCCTCACACTATaGGAGCACATGGCCCACCTA | + |
|
Preference number: 2 (lower is better) Translates to: GPSLHPTPLLTGSEHTNWFFLTL*EHMAHL Trigger: TAGGTGGGCCATGTGCTCCCATAGTGTGAGGAAGAA...CCAATTTGTATGCTCCGACCCAGTGAGCAGCGGGGTAGGGTGCAAGGAAGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTATGCTACACACAGTCTCCAAACCAAGTGACTTTCGAGTGCAAAATGCCCCTAAGGGTCCTTCCTTaGACCCTACCCCGCTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: KLCYTQSPNQVTFECKMPLRVLP*TLPRCS Trigger: TGAGCAGCGGGGTAGGGTGCAAGGAAGGACCCTTAG...GGGCATTTTGCACTCGAAAGTCACTTGGTTTGGAGACTGTGTGTAGCATAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTCCTTCCTTGCACCCTACCCCGCTGCTCACTGGGTCGGAGCATACAAATTGGGAACAAATATTTCTGTaGATTCCTTACTCTCAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: GPSLHPTPLLTGSEHTNWEQIFL*IPYSQG Trigger: GCCTTGAGAGTAAGGAATCCACAGAAATATTTGTTC...CCAATTTGTATGCTCCGACCCAGTGAGCAGCGGGGTAGGGTGCAAGGAAGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTATGCTACACACAGTCTCCAAACCAAGTGACTTTCGAGTGCAAAATGCCCACTCTCAAGGCTTCATaGTCGACAATGAAGGATCCT | + |
|
Preference number: 2 (lower is better) Translates to: KLCYTQSPNQVTFECKMPTLKAS*STMKDP Trigger: AGGATCCTTCATTGTCGATCATGAAGCCTTGAGAGT...GGGCATTTTGCACTCGAAAGTCACTTGGTTTGGAGACTGTGTGTAGCATAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTATGCTACACACAGTCTCCAAACCAAGTGACTTTCGAGTGCAAAATGCCCCAGGTCTTAATTGAGTaGCTCTGCTCAAGCTTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KLCYTQSPNQVTFECKMPQVLIE*LCSSLV Trigger: CACTAAGCTTGAGCAGAGTCACTCAATTAAGACCTG...GGGCATTTTGCACTCGAAAGTCACTTGGTTTGGAGACTGTGTGTAGCATAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTATGCTACACACAGTCTCCAAACCAAGTGACTTTCGAGTGCAAAATGCCCCAGAAAAGCTCCATATaGAAGCTATGTGGCTCATTG | + |
|
Preference number: 2 (lower is better) Translates to: KLCYTQSPNQVTFECKMPQKSSI*KLCGSL Trigger: CAATGAGCCACATAGCTTTCATATGGAGCTTTTCTG...GGGCATTTTGCACTCGAAAGTCACTTGGTTTGGAGACTGTGTGTAGCATAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAGCATGTCATCCAAAATCAAACATCCAGGGCATCTTAACTTGTATCATGCACCACATGAGCTTCAGGTaGCACAGAGGACAAAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: IACHPKSNIQGILTCIMHHMSFR*HRGQRS Trigger: GCTCCTTTGTCCTCTGTGGCACCTGAAGCTCATGTG...GTGCATGATACAAGTTAAGATGCCCTGGATGTTTGATTTTGGATGACATGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAGCATGTCATCCAAAATCAAACATCCAGGGCATCTTAACTTGTATCATGCACTTTGCAGCAAAGGTGTaGTCGGCCAAGTTGTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: IACHPKSNIQGILTCIMHFAAKV*SAKLCL Trigger: CAGGCACAACTTGGCCGAGCACACCTTTGCTGCAAA...GTGCATGATACAAGTTAAGATGCCCTGGATGTTTGATTTTGGATGACATGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAGCATGTCATCCAAAATCAAACATCCAGGGCATCTTAACTTGTATCATGCACGACAATGAAGGATCCTaGAGGAACGGAGGTGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: IACHPKSNIQGILTCIMHDNEGS*RNGGGG Trigger: ACCACCACCTCCGTTCCTGCAGGATCCTTCATTGTC...GTGCATGATACAAGTTAAGATGCCCTGGATGTTTGATTTTGGATGACATGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTATGCTACACACAGTCTCCAAACCAAGTGACTTTCGAGTGCAAAATGCCCAGTTGTGCCTGGGGATaGACATTTAACAAATGCACT | + |
|
Preference number: 2 (lower is better) Translates to: KLCYTQSPNQVTFECKMPSCAWG*TFNKCT Trigger: AGTGCATTTGTTAAATGTCCATCCCCAGGCACAACT...GGGCATTTTGCACTCGAAAGTCACTTGGTTTGGAGACTGTGTGTAGCATAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTATGCTACACACAGTCTCCAAACCAAGTGACTTTCGAGTGCAAAATGCCCTCTGGCAGAAACTTGTaGGAATCTTCAAGCTACATA | + |
|
Preference number: 2 (lower is better) Translates to: KLCYTQSPNQVTFECKMPSGRNL*ESSSYI Trigger: TATGTAGCTTGAAGATTCCCACAAGTTTCTGCCAGA...GGGCATTTTGCACTCGAAAGTCACTTGGTTTGGAGACTGTGTGTAGCATAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTATGCTACACACAGTCTCCAAACCAAGTGACTTTCGAGTGCAAAATGCCCTTGGCATTTAGACTGTaGTGTTCAAAAGCCTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: KLCYTQSPNQVTFECKMPLAFRL*CSKACF Trigger: AAAGCAGGCTTTTGAACACCACAGTCTAAATGCCAA...GGGCATTTTGCACTCGAAAGTCACTTGGTTTGGAGACTGTGTGTAGCATAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR TCA 90 bp | ATATTTAGTATCTTCTTAGTTGAACAAAGCTATGCTACACACAGTCTCCAAACCTCCTTTGTGAGGGGATaGAGGGACTACTGGTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: IFSIFLVEQSYATHSLQTSFVRG*RDYWSE Trigger: CTCTGACCAGTAGTCCCTTCATCCCCTCACAAAGGA...GGTTTGGAGACTGTGTGTAGCATAGCTTTGTTCAACTAAGAAGATACTAAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR TCA 90 bp | ATATTTAGTATCTTCTTAGTTGAACAAAGCTATGCTACACACAGTCTCCAAACCAACGCTAAGGAACACTaGCAAGGGAGACCCTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: IFSIFLVEQSYATHSLQTNAKEH*QGRPCF Trigger: AAAGCAGGGTCTCCCTTGTCAGTGTTCCTTAGCGTT...GGTTTGGAGACTGTGTGTAGCATAGCTTTGTTCAACTAAGAAGATACTAAATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR GCA 90 bp | ATATTTAGTATCTTCTTAGTTGAACAAAGCTATGCTACACACAGTCTCCAAACCGACTCTTCAGTGCCCTaGAGAAGAACCACTTCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: IFSIFLVEQSYATHSLQTDSSVP*RRTTSR Trigger: TCTTGAAGTGGTTCTTCTGCAGGGCACTGAAGAGTC...GGTTTGGAGACTGTGTGTAGCATAGCTTTGTTCAACTAAGAAGATACTAAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTATGAACTGTTTTCATTGGCATTTAGACTGTGGTGTTCAAAAGCCTGCTTTTACTGCACAGCTAATGTaGATTTCCCAGATGTTGATG | + |
|
Preference number: 2 (lower is better) Translates to: SMNCFHWHLDCGVQKPAFTAQLM*ISQMLM Trigger: CATCAACATCTGGGAAATTCACATTAGCTGTGCAGT...AAAAGCAGGCTTTTGAACACCACAGTCTAAATGCCAATGAAAACAGTTCATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTATGAACTGTTTTCATTGGCATTTAGACTGTGGTGTTCAAAAGCCTGCTTTTTGTCATAGACACAAATaGTTGCTGGTTTGGCACCAT | + |
|
Preference number: 2 (lower is better) Translates to: SMNCFHWHLDCGVQKPAFCHRHK*LLVWHH Trigger: ATGGTGCCAAACCAGCAATCATTTGTGTCTATGACA...AAAAGCAGGCTTTTGAACACCACAGTCTAAATGCCAATGAAAACAGTTCATAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR GCA 90 bp | ATATTTAGTATCTTCTTAGTTGAACAAAGCTATGCTACACACAGTCTCCAAACCTCTGTAAGGAGGGTTTaGTTAGCATCCCCGGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: IFSIFLVEQSYATHSLQTSVRRV*LASPEK Trigger: TTTTTCCGGGGATGCTAAGCAAACCCTCCTTACAGA...GGTTTGGAGACTGTGTGTAGCATAGCTTTGTTCAACTAAGAAGATACTAAATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAGCATGTCATCCAAAATCAAACATCCAGGGCATCTTAACTTGTATCATGCACCTTTTGAGGAATACATaGAGAAACCGACAAATTGGT | + |
|
Preference number: 2 (lower is better) Translates to: IACHPKSNIQGILTCIMHLLRNT*RNRQIG Trigger: ACCAATTTGTCGGTTTCTCCATGTATTCCTCAAAAG...GTGCATGATACAAGTTAAGATGCCCTGGATGTTTGATTTTGGATGACATGCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR CCA 90 bp | ATATTTAGTATCTTCTTAGTTGAACAAAGCTATGCTACACACAGTCTCCAAACCCATGGGACTAGAGAATaGCTTCTCTGGGTTACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: IFSIFLVEQSYATHSLQTHGTRE*LLWVTF Trigger: AAAAGTAACCCAGAGAAGCCATTCTCTAGTCCCATG...GGTTTGGAGACTGTGTGTAGCATAGCTTTGTTCAACTAAGAAGATACTAAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAGCATGTCATCCAAAATCAAACATCCAGGGCATCTTAACTTGTATCATGCACGCTATTAACTATTCTTaGTTTGAAGCAAAGCTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: IACHPKSNIQGILTCIMHAINYS*FEAKLR Trigger: CCTTAGCTTTGCTTCAAACCAAGAATAGTTAATAGC...GTGCATGATACAAGTTAAGATGCCCTGGATGTTTGATTTTGGATGACATGCTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCTTCCTTGCACCCTACCCCGCTGCTCACTGGGTCGGAGCATACAAATTGGCCAGTTCAGGTAGTGTaGGATCCTGAGTTGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GPSLHPTPLLTGSEHTNWPVQVV*DPELWL Trigger: CAGCCACAACTCAGGATCCAACACTACCTGAACTGG...CCAATTTGTATGCTCCGACCCAGTGAGCAGCGGGGTAGGGTGCAAGGAAGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR TCA 72 bp | CCTGCTCAGCTCCCAGGGATGTCAAAGCCCTCCACATaGGCTTCAGGTGCCACAGAGGACAAAGGAGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: PAQLPGMSKPST*ASGATEDKGAD Trigger: ATCAGCTCCTTTGTCCTCTGTGGCACCTGAAGCTCATGTGGAGGGCTTTGACATCCCTGGGAGCTGAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR CCA 72 bp | AGGATCCTGCAGGAACGGAGGTGGTGGTGGCACAGATaGATAACCCTCTCGGTATCCAGCTTTGCAGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RILQERRWWWHR*ITLSVSSFAAK Trigger: CTTTGCTGCAAAGCTGGATACCGAGAGGGTTATCCATCTGTGCCACCACCACCTCCGTTCCTGCAGGATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCTTCCTTGCACCCTACCCCGCTGCTCACTGGGTCGGAGCATACAAATTGGCATCAACACGAGTCATaGCTTCTGGTTTGTCCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: GPSLHPTPLLTGSEHTNWHQHES*LLVCPN Trigger: GTTAGGACAAACCAGAAGCAATGACTCGTGTTGATG...CCAATTTGTATGCTCCGACCCAGTGAGCAGCGGGGTAGGGTGCAAGGAAGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR TCA 72 bp | GTGGATTCCTTACTCTCAAGGCTTCATGATCGACAATaGAGGATCCTGCAGGAACGGAGGTGGTGGTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VDSLLSRLHDRQ*RILQERRWWWH Trigger: GTGCCACCACCACCTCCGTTCCTGCAGGATCCTTCATTGTCGATCATGAAGCCTTGAGAGTAAGGAATCCAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR GCA 72 bp | ATGAACATAGTGCCATCAAATCAAGTTCCCTGCAAGTaGAGGGCTCCAAGACCTCTCACTCCCCGACATCCA | + |
|
Preference number: 3 (lower is better) Translates to: MNIVPSNQVPCK*RAPRPLTPRHP Trigger: TGGATGTCGGGGAGTGAGAGGTCTTGGAGCCCTGCACTTGCAGGGAACTTGATTTGATGGCACTATGTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR CCA 72 bp | GCTTTGCAGCAAAGGTGTGCTCGGCCAAGTTGTGCCTaGGGATGGACATTTAACAAATGCACTGCACAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: ALQQRCARPSCA*GWTFNKCTAQL Trigger: TAGCTGTGCAGTGCATTTGTTAAATGTCCATCCCCAGGCACAACTTGGCCGAGCACACCTTTGCTGCAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR GCA 72 bp | ACAACTATGAACATAGTGCCATCAAATCAAGTTCCCTaGAAGTGCAGGGCTCCAAGACCTCTCACTCCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: TTMNIVPSNQVP*KCRAPRPLTPR Trigger: TCGGGGAGTGAGAGGTCTTGGAGCCCTGCACTTGCAGGGAACTTGATTTGATGGCACTATGTTCATAGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR TCA 72 bp | GGATGGACATTTAACAAATGCACTGCACAGCTAATGTaGATTTCCCAGATGTTGATGGTCCAGCCGGTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: GWTFNKCTAQLM*ISQMLMVQPVL Trigger: TAGGACCGGCTGGACCATCAACATCTGGGAAATTCACATTAGCTGTGCAGTGCATTTGTTAAATGTCCATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR TCA 72 bp | GGGATGAAGGGACTACTGGTCAGAGGCAGCCATATCTaGCCATTGTGCCCATTTTATTTCTCAGATTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GMKGLLVRGSHI*PLCPFYFSDLE Trigger: TTCCAAATCTGAGAAATAAAATGGGCACAATGGTCAGATATGGCTGCCTCTGACCAGTAGTCCCTTCATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR CCA 72 bp | CTATTTATCTGCAACATCAACACGAGTCATTGCTTCTaGTTTGTCCTAACAGGGTACCTGACAGGAAATTGC | + |
|
Preference number: 3 (lower is better) Translates to: LFICNINTSHCF*FVLTGYLTGNC Trigger: GCAATTTCCTGTCAGGTACCCTGTTAGGACAAACCAGAAGCAATGACTCGTGTTGATGTTGCAGATAAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCATGTCATCCAAAATCAAACATCCAGGGCATCTTAACTTGTATCATGCACATCTGTAAGGAGGGTTaGCTTAGCATCCCCGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: IACHPKSNIQGILTCIMHICKEG*LSIPGK Trigger: TTTTCCGGGGATGCTAAGCAAACCCTCCTTACAGAT...GTGCATGATACAAGTTAAGATGCCCTGGATGTTTGATTTTGGATGACATGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR TCA 72 bp | TTTGGCACCATACAGCTCACACAGAAAAGCTCCATATaGAAGCTATGTGGCTCATTGGATATGGGAGTATTA | + |
|
Preference number: 3 (lower is better) Translates to: FGTIQLTQKSSI*KLCGSLDMGVL Trigger: TAATACTCCCATATCCAATGAGCCACATAGCTTTCATATGGAGCTTTTCTGTGTGAGCTGTATGGTGCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR TCA 72 bp | CATGTTTACAGCCTGTCCTCATCAATTTACTGCAAATaGACCACCACTGACAAGAACATAGCATGTCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: HVYSLSSSIYCK*TTTDKNIACHP Trigger: TGGATGACATGCTATGTTCTTGTCAGTGGTGGTTCATTTGCAGTAAATTGATGAGGACAGGCTGTAAACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR CCA 72 bp | ACAGCTCACACAGAAAAGCTCCATATGAAAGCTATGTaGCTCATTGGATATGGGAGTATTAGTACCACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TAHTEKLHMKAM*LIGYGSISTTQ Trigger: TTGAGTGGTACTAATACTCCCATATCCAATGAGCCACATAGCTTTCATATGGAGCTTTTCTGTGTGAGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR TCA 72 bp | TGGATGCTCTTTTATACTATGTGTCATAGACACAAATaGTTGCTGGTTTGGCACCATACAGCTCACACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: WMLFYTMCHRHK*LLVWHHTAHTE Trigger: TTCTGTGTGAGCTGTATGGTGCCAAACCAGCAATCATTTGTGTCTATGACACATAGTATAAAAGAGCATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR TCA 72 bp | GAACAAAGCTATGCTACACACAGTCTCCAAACCAAGTaGCTTTCGAGTGCAAAATGCCCATTTAATGATGTA | + |
|
Preference number: 3 (lower is better) Translates to: EQSYATHSLQTK*LSSAKCPFNDV Trigger: TACATCATTAAATGGGCATTTTGCACTCGAAAGTCACTTGGTTTGGAGACTGTGTGTAGCATAGCTTTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR GCA 72 bp | TGCTCTTTTATACTATGTGTCATAGACACAAATGATTaGTGGTTTGGCACCATACAGCTCACACAGAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: CSFILCVIDTND*WFGTIQLTQKS Trigger: GCTTTTCTGTGTGAGCTGTATGGTGCCAAACCAGCAATCATTTGTGTCTATGACACATAGTATAAAAGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR CCA 72 bp | TCTTTTATACTATGTGTCATAGACACAAATGATTGCTaGTTTGGCACCATACAGCTCACACAGAAAAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SFILCVIDTNDC*FGTIQLTQKSS Trigger: GGAGCTTTTCTGTGTGAGCTGTATGGTGCCAAACCAGCAATCATTTGTGTCTATGACACATAGTATAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR TCA 72 bp | TTATGTTCACAGTTTGACATGACAAAATGTCATTACTaGATTCCCATTGGACTACAGGGTAGAAACAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LCSQFDMTKCHY*IPIGLQGRNRR Trigger: CCTTCTGTTTCTACCCTGTAGTCCAATGGGAATTCAGTAATGACATTTTGTCATGTCAAACTGTGAACATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR TCA 72 bp | ATATTTACAAATAGTGTCACTCAGGTCTTAATTGAGTaGCTCTGCTCAAGCTTAGTGGATGCTCTTTTATAC | + |
|
Preference number: 3 (lower is better) Translates to: IFTNSVTQVLIE*LCSSLVDALLY Trigger: GTATAAAAGAGCATCCACTAAGCTTGAGCAGAGTCACTCAATTAAGACCTGAGTGACACTATTTGTAAATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR TCA 90 bp | GGTCCTTCCTTGCACCCTACCCCGCTGCTCACTGGGTCGGAGCATACAAATTGGCCACGACGGGCTGAATaGCGGGGAGGATGCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPSLHPTPLLTGSEHTNWPRRAE*RGGCLG Trigger: GCCCAGGCATCCTCCCCGTCATTCAGCCCGTCGTGG...CCAATTTGTATGCTCCGACCCAGTGAGCAGCGGGGTAGGGTGCAAGGAAGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR TCA 90 bp | GGTCCTTCCTTGCACCCTACCCCGCTGCTCACTGGGTCGGAGCATACAAATTGGTGGAGGAGGGCATGCTaGGGCCAGGTGACGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPSLHPTPLLTGSEHTNWWRRAC*GQVTLS Trigger: GGAGAGCGTCACCTGGCCTCAGCATGCCCTCCTCCA...CCAATTTGTATGCTCCGACCCAGTGAGCAGCGGGGTAGGGTGCAAGGAAGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCCTGCTCAGCTCCCAGGGATGTCAAAGCCCTCCACATGAGCTTCAGGTGCGGTACTCCAAAGGGCTaGACGCCAGGAGAAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSCSAPRDVKALHMSFRCGTPKG*TPGEGG Trigger: GCCCCCTTCTCCTGGCGTGCAGCCCTTTGGAGTACC...GCACCTGAAGCTCATGTGGAGGGCTTTGACATCCCTGGGAGCTGAGCAGGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAGGATCCTGCAGGAACGGAGGTGGTGGTGGCACAGATGGATAACCCTCTCCCCGCTTGTTCACCGTaGGGTCCACCGGCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: MKDPAGTEVVVAQMDNPLPACSP*GPPAPP Trigger: AGGTGGAGCCGGTGGACCTCACGGTGAACAAGCGGG...GAGAGGGTTATCCATCTGTGCCACCACCACCTCCGTTCCTGCAGGATCCTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCCACGACGGGCTGAATaGCGGGGAGGATGCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RERERKRERPGRAGNHTEPRRAE*RGGCLG Trigger: GCCCAGGCATCCTCCCCGTCATTCAGCCCGTCGTGG...CTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCCCGCTTGTTCACCGTaGGGTCCACCGGCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RERERKRERPGRAGNHTEPACSP*GPPAPP Trigger: AGGTGGAGCCGGTGGACCTCACGGTGAACAAGCGGG...CTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR TCA 90 bp | GATAGGAGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACTGGAGGAGGGCATGCTaGGGCCAGGTGACGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DRRERERKRERPGRAGNHWRRAC*GQVTLS Trigger: GGAGAGCGTCACCTGGCCTCAGCATGCCCTCCTCCA...GTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCTCCTATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCGGTACTCCAAAGGGCTaGACGCCAGGAGAAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERERERERGQEERGITLSGTPKG*TPGEGG Trigger: GCCCCCTTCTCCTGGCGTGCAGCCCTTTGGAGTACC...GCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR TCA 90 bp | AGCTCCTGCTCAGCTCCCAGGGATGTCAAAGCCCTCCACATGAGCTTCAGGTGCCCATGGCCTCCTGCTTaGCAGGGACTGGATCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SSCSAPRDVKALHMSFRCPWPPA*QGLDQT Trigger: TGTTTGATCCAGTCCCTGTCAAGCAGGAGGCCATGG...GCACCTGAAGCTCATGTGGAGGGCTTTGACATCCCTGGGAGCTGAGCAGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCTGGAGTCCACCTGTATCCCGTaGGTGAGGCCTTCTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RERKRERPGRAGNHTELESTCIP*VRPSGV Trigger: GACCCCAGAAGGCCTCACTCACGGGATACAGGTGGA...CTCCAGCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR TCA 90 bp | ATGAAGGATCCTGCAGGAACGGAGGTGGTGGTGGCACAGATGGATAACCCTCTCCCGACAAGGAAACCATaGGAGGCTGCTGCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MKDPAGTEVVVAQMDNPLPTRKP*EAAAGG Trigger: GCCACCTGCAGCAGCCTCTCATGGTTTCCTTGTCGG...GAGAGGGTTATCCATCTGTGCCACCACCACCTCCGTTCCTGCAGGATCCTTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCTGGAGCCGACAAGGAAACCATaGGAGGCTGCTGCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RERKRERPGRAGNHTELEPTRKP*EAAAGG Trigger: GCCACCTGCAGCAGCCTCTCATGGTTTCCTTGTCGG...CTCCAGCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR TCA 90 bp | GAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCGGAAGGATGGTTCCATaGGCCAGGCACTGTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERERERERGQEERGITLSGRMVP*ARHCAW Trigger: CCAAGCACAGTGCCTGGCTCATGGAACCATCCTTCC...GCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198946.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCTGGAGTCCCAGGCTGCACGATaGCGGAAGGATGGTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RERKRERPGRAGNHTELESQAAR*RKDGSM Trigger: CATGGAACCATCCTTCCGTCATCGTGCAGCCTGGGA...CTCCAGCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198946.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCTGGAGGGGTCCATGGCCTCCTaGTTGACAGGGACTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: RERKRERPGRAGNHTELEGSMAS*LTGTGS Trigger: TGATCCAGTCCCTGTCAAGCAGGAGGCCATGGACCC...CTCCAGCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCTGGAGCCATGGCCTCCTGCTTaGCAGGGACTGGATCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RERKRERPGRAGNHTELEPWPPA*QGLDQT Trigger: TGTTTGATCCAGTCCCTGTCAAGCAGGAGGCCATGG...CTCCAGCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCTGGAGTCCCAGGCTGCACGATaGCGGAAGGATGGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RERKRERPGRAGNHTELESQAAR*RKDGSL Trigger: AAGAGAACCATCCTTCCGTCATCGTGCAGCCTGGGA...CTCCAGCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR GCA 90 bp | GATAGGAGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACGGGTCCATGGCCTCCTaGTTGACAGGGACTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: DRRERERKRERPGRAGNHGSMAS*LTGTGS Trigger: TGATCCAGTCCCTGTCAAGCAGGAGGCCATGGACCC...GTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCTCCTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCGAGCGAACTTCCACGTaGAGCCTTCCCAGGTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: ERERERERGQEERGITLSERTST*SLPRCI Trigger: AATGCACCTGGGAAGGCTGCACGTGGAAGTTCGCTC...GCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 ENSMUST00000198946.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCCTGCTCAGCTCCCAGGGATGTCAAAGCCCTCCACATGAGCTTCAGGTGCACGGTGTGGAGTAAATaGCCCCATATTTGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSCSAPRDVKALHMSFRCTVWSK*PHICWA Trigger: AGCCCAACAAATATGGGGTCATTTACTCCACACCGT...GCACCTGAAGCTCATGTGGAGGGCTTTGACATCCCTGGGAGCTGAGCAGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGATGAGCCAGGCACTGTaGTTGGCACCGGGACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RERERKRERPGRAGNHTEMSQAL*LAPGHK Trigger: TTTGTGTCCCGGTGCCAAGCACAGTGCCTGGCTCAT...CTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198946.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCTGGAGACGATGACGGAAGGATaGTTCCATGAGCCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RERKRERPGRAGNHTELETMTEG*FHEPGT Trigger: AGTGCCTGGCTCATGGAACCATCCTTCCGTCATCGT...CTCCAGCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198946.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCTGGAGAGGCCTTCTGGGGTCTaGAAGAACTTATCAGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RERKRERPGRAGNHTELERPSGV*KNLSGN Trigger: GTTGCCTGATAAGTTCTTCCAGACCCCAGAAGGCCT...CTCCAGCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCGTGAGTGAGGCCTTCTaGGGTCTGGAAGAACTTATC | + |
|
Preference number: 4 (lower is better) Translates to: ERERERERGQEERGITLSVSEAF*GLEELI Trigger: GATAAGTTCTTCCAGACCCCAGAAGGCCTCACTCAC...GCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR TCA 90 bp | GATAGGAGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACTGGCATGCCGCTGTTTaGATTGTCCATCTCTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: DRRERERKRERPGRAGNHWHAAV*IVHLFR Trigger: TCGGAAGAGATGGACAATTCAAACAGCGGCATGCCA...GTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCTCCTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCTGGAGGACACTGGAAAGGTTTaGTCCCAGTGTGTTTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RERKRERPGRAGNHTELEDTGKV*SQCVFG Trigger: TCCGAAAACACACTGGGATCAAACCTTTCCAGTGTC...CTCCAGCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 ENSMUST00000198946.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGAGGCCTTCTGGGGTCTaGAAGAACTTATCAGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RERERKRERPGRAGNHTERPSGV*KNLSGN Trigger: GTTGCCTGATAAGTTCTTCCAGACCCCAGAAGGCCT...CTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGACGGTGTGGAGTAAATaGCCCCATATTTGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RERERKRERPGRAGNHTETVWSK*PHICWA Trigger: AGCCCAACAAATATGGGGTCATTTACTCCACACCGT...CTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGGACACTGGAAAGGTTTaGTCCCAGTGTGTTTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RERERKRERPGRAGNHTEDTGKV*SQCVFG Trigger: TCCGAAAACACACTGGGATCAAACCTTTCCAGTGTC...CTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 ENSMUST00000198946.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCACCGGGACACAAAGATaGATAAAAACAGGGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERERERERGQEERGITLSTGTQR*IKTGFL Trigger: CAGGAACCCTGTTTTTATTCATCTTTGTGTCCCGGT...GCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198946.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAGGATCCTGCAGGAACGGAGGTGGTGGTGGCACAGATGGATAACCCTCTCATGAGTTCTTCTGTGTaGTTTCAAGTGCGAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MKDPAGTEVVVAQMDNPLMSSSV*FQVRAL Trigger: AAGAGCTCGCACTTGAAAGCACACAGAAGAACTCAT...GAGAGGGTTATCCATCTGTGCCACCACCACCTCCGTTCCTGCAGGATCCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTATGCTACACACAGTCTCCAAACCAAGTGACTTTCGAGTGCAAAATGCCCGAAACCATGAGAGGCTaGTGCAGGTGGCTGGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: KLCYTQSPNQVTFECKMPETMRG*CRWLVY Trigger: GTATACCAGCCACCTGCAGCAGCCTCTCATGGTTTC...GGGCATTTTGCACTCGAAAGTCACTTGGTTTGGAGACTGTGTGTAGCATAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR GCA 90 bp | GATAGGAGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACATGAGTTCTTCTGTGTaGTTTCAAGTGCGAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DRRERERKRERPGRAGNHMSSSV*FQVRAL Trigger: AAGAGCTCGCACTTGAAAGCACACAGAAGAACTCAT...GTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCTCCTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 ENSMUST00000198946.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGATGAGTTCTTCTGTGTaGTTTCAAGTGCGAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RERERKRERPGRAGNHTEMSSSV*FQVRAL Trigger: AAGAGCTCGCACTTGAAAGCACACAGAAGAACTCAT...CTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 ENSMUST00000198946.2 |
||
| CDS-3UTR TCA 90 bp | ATAGCATGTCATCCAAAATCAAACATCCAGGGCATCTTAACTTGTATCATGCACTCCACCTGTATCCCGTaGGTGAGGCCTTCTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IACHPKSNIQGILTCIMHSTCIP*VRPSGV Trigger: GACCCCAGAAGGCCTCACTCACGGGATACAGGTGGA...GTGCATGATACAAGTTAAGATGCCCTGGATGTTTGATTTTGGATGACATGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR TCA 90 bp | ATATTTAGTATCTTCTTAGTTGAACAAAGCTATGCTACACACAGTCTCCAAACCCCTGTATCCCGTGAGTaGGGCCTTCTGGGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IFSIFLVEQSYATHSLQTPVSRE*GLLGSG Trigger: TCCAGACCCCAGAAGGCCTCACTCACGGGATACAGG...GGTTTGGAGACTGTGTGTAGCATAGCTTTGTTCAACTAAGAAGATACTAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR GCA 90 bp | ATAGCATGTCATCCAAAATCAAACATCCAGGGCATCTTAACTTGTATCATGCACGAGCGAACTTCCACGTaGAGCCTTCCCAGGTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: IACHPKSNIQGILTCIMHERTST*SLPRCI Trigger: AATGCACCTGGGAAGGCTGCACGTGGAAGTTCGCTC...GTGCATGATACAAGTTAAGATGCCCTGGATGTTTGATTTTGGATGACATGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR CAA 72 bp | CTTCTGGTTTGTCCTAACAGGGTACCTGACAGGAAATaGCTAGCTCTGGCAGAAACTTGTGGGAATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLVCPNRVPDRK*LALAETCGNLQ Trigger: TTGAAGATTCCCACAAGTTTCTGCCAGAGCTAGCAATTTCCTGTCAGGTACCCTGTTAGGACAAACCAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| 3UTR CAA 72 bp | AATGGTGCTATTTATCTGCAACATCAACACGAGTCATaGCTTCTGGTTTGTCCTAACAGGGTACCTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NGAIYLQHQHES*LLVCPNRVPDR Trigger: CCTGTCAGGTACCCTGTTAGGACAAACCAGAAGCAATGACTCGTGTTGATGTTGCAGATAAATAGCACCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR TCA 90 bp | ATAGCATGTCATCCAAAATCAAACATCCAGGGCATCTTAACTTGTATCATGCACTGGCATGCCGCTGTTTaGATTGTCCATCTCTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: IACHPKSNIQGILTCIMHWHAAV*IVHLFR Trigger: TCGGAAGAGATGGACAATTCAAACAGCGGCATGCCA...GTGCATGATACAAGTTAAGATGCCCTGGATGTTTGATTTTGGATGACATGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR CCA 90 bp | ATAGCATGTCATCCAAAATCAAACATCCAGGGCATCTTAACTTGTATCATGCACGTGAGTGAGGCCTTCTaGGGTCTGGAAGAACTTATC | + |
|
Preference number: 4 (lower is better) Translates to: IACHPKSNIQGILTCIMHVSEAF*GLEELI Trigger: GATAAGTTCTTCCAGACCCCAGAAGGCCTCACTCAC...GTGCATGATACAAGTTAAGATGCCCTGGATGTTTGATTTTGGATGACATGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR CCA 90 bp | ATATTTAGTATCTTCTTAGTTGAACAAAGCTATGCTACACACAGTCTCCAAACCACGATGACGGAAGGATaGTTCTCTTGCAACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IFSIFLVEQSYATHSLQTTMTEG*FSCNKA Trigger: AGCCTTGTTGCAAGAGAACCATCCTTCCGTCATCGT...GGTTTGGAGACTGTGTGTAGCATAGCTTTGTTCAACTAAGAAGATACTAAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCGGCGGGGAGCCCCGCTaGTTCACCGTGAGGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: ERERERERGQEERGITLSGGEPR*FTVRST Trigger: GGTGGACCTCACGGTGAACAAGCGGGGCTCCCCGCC...GCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGGGCGGGGAGCCCCGCTaGTTCACCGTGAGGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RERERKRERPGRAGNHTEGGEPR*FTVRST Trigger: GGTGGACCTCACGGTGAACAAGCGGGGCTCCCCGCC...CTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR CAA 90 bp | AGCTCCTGCTCAGCTCCCAGGGATGTCAAAGCCCTCCACATGAGCTTCAGGTGCTCCATGGCCTCCTGCTaGACAGGGACTGGATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSCSAPRDVKALHMSFRCSMASC*TGTGSN Trigger: GTTTGATCCAGTCCCTGTCAAGCAGGAGGCCATGGA...GCACCTGAAGCTCATGTGGAGGGCTTTGACATCCCTGGGAGCTGAGCAGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCTGGAGGGAAGGATGGTTCTCTaGCAACAAGGCTTGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RERKRERPGRAGNHTELEGRMVL*QQGLRG Trigger: CCCCCGCAAGCCTTGTTGCAAGAGAACCATCCTTCC...CTCCAGCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCTGGAGTCCATGGCCTCCTGCTaGACAGGGACTGGATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RERKRERPGRAGNHTELESMASC*TGTGSN Trigger: GTTTGATCCAGTCCCTGTCAAGCAGGAGGCCATGGA...CTCCAGCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGGGAAGGATGGTTCTCTaGCAACAAGGCTTGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RERERKRERPGRAGNHTEGRMVL*QQGLRG Trigger: CCCCCGCAAGCCTTGTTGCAAGAGAACCATCCTTCC...CTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR CAA 90 bp | AGCTCCTGCTCAGCTCCCAGGGATGTCAAAGCCCTCCACATGAGCTTCAGGTGCGGACACTGGAAAGGTTaGATCCCAGTGTGTTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSCSAPRDVKALHMSFRCGHWKG*IPVCFR Trigger: CCGAAAACACACTGGGATCAAACCTTTCCAGTGTCC...GCACCTGAAGCTCATGTGGAGGGCTTTGACATCCCTGGGAGCTGAGCAGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCTTCCTTGCACCCTACCCCGCTGCTCACTGGGTCGGAGCATACAAATTGGATGCCGCTGTTTGAATaGTCCATCTCTTCCGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: GPSLHPTPLLTGSEHTNWMPLFE*SISSDK Trigger: CTTGTCGGAAGAGATGGACAATTCAAACAGCGGCAT...CCAATTTGTATGCTCCGACCCAGTGAGCAGCGGGGTAGGGTGCAAGGAAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGTATCCTGCGCTTCCTTaGGGTATCCGGGGATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RERERKRERPGRAGNHTEYPALP*GIRGFH Trigger: GTGGAATCCCCGGATACCCAAAGGAAGCGCAGGATA...CTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 ENSMUST00000198946.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCTGGCATGCCGCTGTTaGAATTGTCCATCTCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RERERKRERPGRAGNHTELACRC*NCPSLP Trigger: CGGAAGAGATGGACAATTCAAACAGCGGCATGCCAG...CTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGCTGGAGGGACACTGGAAAGGTTaGATCCCAGTGTGTTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RERKRERPGRAGNHTELEGHWKG*IPVCFR Trigger: CCGAAAACACACTGGGATCAAACCTTTCCAGTGTCC...CTCCAGCTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 ENSMUST00000198946.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGAGAAAGAGAGAGAGGCCAGGAAGAGCGGGGAATCACACTGAGGGACACTGGAAAGGTTaGATCCCAGTGTGTTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RERERKRERPGRAGNHTEGHWKG*IPVCFR Trigger: CCGAAAACACACTGGGATCAAACCTTTCCAGTGTCC...CTCAGTGTGATTCCCCGCTCTTCCTGGCCTCTCTCTCTTTCTCTCTCTCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 ENSMUST00000198946.2 |
||
| CDS-3UTR CAA 90 bp | ATAGCATGTCATCCAAAATCAAACATCCAGGGCATCTTAACTTGTATCATGCACTATCCTGCGCTTCCTTaGGGTATCCGGGGATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IACHPKSNIQGILTCIMHYPALP*GIRGFH Trigger: GTGGAATCCCCGGATACCCAAAGGAAGCGCAGGATA...GTGCATGATACAAGTTAAGATGCCCTGGATGTTTGATTTTGGATGACATGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS-3UTR CAA 90 bp | ATAGCATGTCATCCAAAATCAAACATCCAGGGCATCTTAACTTGTATCATGCACCTGGCATGCCGCTGTTaGAATTGTCCATCTCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: IACHPKSNIQGILTCIMHLACRC*NCPSLP Trigger: CGGAAGAGATGGACAATTCAAACAGCGGCATGCCAG...GTGCATGATACAAGTTAAGATGCCCTGGATGTTTGATTTTGGATGACATGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165536.8 |
||
| CDS GCA 72 bp | ATCACAGGCGGCATAGACAGGGGTACTCCAAAGGGCTaGACGCCAGGAGAAGGGGGCGAGTACTTCTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: ITGGIDRGTPKG*TPGEGGEYFLM Trigger: CATTAAGAAGTACTCGCCCCCTTCTCCTGGCGTGCAGCCCTTTGGAGTACCCCTGTCTATGCCGCCTGTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 ENSMUST00000197879.2 |
||
| CDS CAA 72 bp | GAGAAGCTTCGGTCACAGTCTGGACACTGGAAAGGTTaGATCCCAGTGTGTTTTCGGAAATGTCTCGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: EKLRSQSGHWKG*IPVCFRKCLVS Trigger: ACTGACGAGACATTTCCGAAAACACACTGGGATCAAACCTTTCCAGTGTCCAGACTGTGACCGAAGCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 ENSMUST00000198946.2 |
||
| CDS TCA 72 bp | AGAAGCTTCGGTCACAGTCTGGACACTGGAAAGGTTTaGTCCCAGTGTGTTTTCGGAAATGTCTCGTCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RSFGHSLDTGKV*SQCVFGNVSSV Trigger: AACTGACGAGACATTTCCGAAAACACACTGGGATCAAACCTTTCCAGTGTCCAGACTGTGACCGAAGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165536.8 ENSMUST00000166409.6 ENSMUST00000198946.2 |
||