Pregenerated sensors for KLF17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048626Ensembl transcript IDs: ENSMUST00000062747.6
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAATGCCAGATGCCATGTCTTGAAATGGGCATTCTATCCCAAGAGTaGAGGGAAGAGACCAACTCTGGGCATGCGGACAGTGAAGGCCAG | + |
|
Preference number: 1 (lower is better) Translates to: KCQMPCLEMGILSQE*REETNSGHADSEGQ Trigger: CTGGCCTTCACTGTCCGCATGCCCAGAGTTGGTCTCTTCCCTCCACTCTTGGGATAGAATGCCCATTTCAAGACATGGCATCTGGCATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR TCA 90 bp | AAGGCTTGGTTTGGGTGGCCCCATGAAATGCCAGATGCCATGTCTTaGAATGGGCATTCTATCCCAAGAGTGGAGGGAAGAGACCAACTC | + |
|
Preference number: 1 (lower is better) Translates to: KAWFGWPHEMPDAMS*NGHSIPRVEGRDQL Trigger: GAGTTGGTCTCTTCCCTCCACTCTTGGGATAGAATGCCCATTTCAAGACATGGCATCTGGCATTTCATGGGGCCACCCAAACCAAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR CCA 90 bp | ATTGTGCTGTCAGCGATACGATGTCTTGCAACAATTCATGGAGGTTaGGGGGAGATTTGCTGCCTGCCTCTCTCCCATCTCCCATTCATA | + |
|
Preference number: 1 (lower is better) Translates to: IVLSAIRCLATIHGG*GEICCLPLSHLPFI Trigger: TATGAATGGGAGATGGGAGAGAGGCAGGCAGCAAATCTCCCCCCAACCTCCATGAATTGTTGCAAGACATCGTATCGCTGACAGCACAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR CCA 90 bp | AAAACCAGAAAGCCAGGCAGGAGAGGCAACCTGAAGCCAGCTGGGTaGTTTAACTCCAGAACTTTCCAGGCAAATACAGGAAAGCTGCTA | + |
|
Preference number: 1 (lower is better) Translates to: KTRKPGRRGNLKPAG*FNSRTFQANTGKLL Trigger: TAGCAGCTTTCCTGTATTTGCCTGGAAAGTTCTGGAGTTAAACCACCCAGCTGGCTTCAGGTTGCCTCTCCTGCCTGGCTTTCTGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR TCA 90 bp | CCTGTCTCCATCCGAACCTTCACCTTCCCAGAGATGATCTGGTCTTaGGCAACTGAATCTTGGGTTAGAGACTACAGGAAAGAGCTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: PVSIRTFTFPEMIWS*ATESWVRDYRKELK Trigger: CTTCAGCTCTTTCCTGTAGTCTCTAACCCAAGATTCAGTTGCTCAAGACCAGATCATCTCTGGGAAGGTGAAGGTTCGGATGGAGACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR TCA 90 bp | CCATTCATATTAGTCTCCTCACAAGGCTTGGTTTGGGTGGCCCCATaGAATGCCAGATGCCATGTCTTGAAATGGGCATTCTATCCCAAG | + |
|
Preference number: 1 (lower is better) Translates to: PFILVSSQGLVWVAP*NARCHVLKWAFYPK Trigger: CTTGGGATAGAATGCCCATTTCAAGACATGGCATCTGGCATTTCATGGGGCCACCCAAACCAAGCCTTGTGAGGAGACTAATATGAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR CCA 90 bp | CCTCCTACTCCCCAGGCCATCTTAAATGGCCTATACACTTTTATTTaGGATATTCAAAGCCAAGGTATAGGAAGGAGATCAAGTGAAAGG | + |
|
Preference number: 1 (lower is better) Translates to: PPTPQAILNGLYTFI*DIQSQGIGRRSSER Trigger: CCTTTCACTTGATCTCCTTCCTATACCTTGGCTTTGAATATCCCAAATAAAAGTGTATAGGCCATTTAAGATGGCCTGGGGAGTAGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR CCA 90 bp | CCCATTCATATTAGTCTCCTCACAAGGCTTGGTTTGGGTGGCCCCATGAAATGCCCCATGGTCTGGCCCTaGAACCTGGAAGGCCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PIHISLLTRLGLGGPMKCPMVWP*NLEGPG Trigger: CCCTGGGCCTTCCAGGTTCCAGGGCCAGACCATGGG...GCATTTCATGGGGCCACCCAAACCAAGCCTTGTGAGGAGACTAATATGAATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR CAA 90 bp | GTCTGGCCCTGGAACCTGGAAGGCCCAGGGAGAGAACATGGGATTTaGTGGAACAGTCATGAGAGAGCCACACTTGGGGTTGACAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VWPWNLEGPGREHGI*WNSHERATLGVDRR Trigger: TCTCCTGTCAACCCCAAGTGTGGCTCTCTCATGACTGTTCCACAAAATCCCATGTTCTCTCCCTGGGCCTTCCAGGTTCCAGGGCCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTAGATGACCAGGATAGCTACTGCCCCTCAAAACCAGAAAGCCAGGCAGGAACCTTTCCCATGGTCTaGCCCTGGAACCTGGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: VLDDQDSYCPSKPESQAGTFPMV*PWNLEG Trigger: GCCTTCCAGGTTCCAGGGCCAGACCATGGGAAAGGT...TCCTGCCTGGCTTTCTGGTTTTGAGGGGCAGTAGCTATCCTGGTCATCTAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR CCA 90 bp | AGATGCCATGTCTTGAAATGGGCATTCTATCCCAAGAGTGGAGGGAAGAGACCATCTGGCCCTGGAACCTaGAAGGCCCAGGGAGAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: RCHVLKWAFYPKSGGKRPSGPGT*KAQGEN Trigger: GTTCTCTCCCTGGGCCTTCCAGGTTCCAGGGCCAGA...TGGTCTCTTCCCTCCACTCTTGGGATAGAATGCCCATTTCAAGACATGGCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTAGATGACCAGGATAGCTACTGCCCCTCAAAACCAGAAAGCCAGGCAGGACAAAGACCTTTCCCATaGTCTGGCCCTGGAACCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VLDDQDSYCPSKPESQAGQRPFP*SGPGTW Trigger: CCAGGTTCCAGGGCCAGACCATGGGAAAGGTCTTTG...TCCTGCCTGGCTTTCTGGTTTTGAGGGGCAGTAGCTATCCTGGTCATCTAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR TCA 90 bp | AGTGGAGGGAAGAGACCAACTCTGGGCATGCGGACAGTGAAGGCCAGAGAGAATTTGAGAAACACATGGTaGCATCCAGAGCTTCGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SGGKRPTLGMRTVKARENLRNTW*HPELRV Trigger: CACACGAAGCTCTGGATGTCACCATGTGTTTCTCAA...ATTCTCTCTGGCCTTCACTGTCCGCATGCCCAGAGTTGGTCTCTTCCCTCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR CCA 90 bp | AGCCAGCTGGGTGGTTTAACTCCAGAACTTTCCAGGCAAATACAGGAAAGCTGCATCCAGAGCTTCGTGTaGGCTTCCCCACCACTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SQLGGLTPELSRQIQESCIQSFV*ASPPLP Trigger: AGGAAGTGGTGGGGAAGCCCACACGAAGCTCTGGAT...GCAGCTTTCCTGTATTTGCCTGGAAAGTTCTGGAGTTAAACCACCCAGCTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGCAGGAGAGGCAACCTGAAGCCAGCTGGGTGGTTTAACTCCAGAACTTTCCCCAGGGAGAGAACATaGGATTTTGTGGAACAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: PGRRGNLKPAGWFNSRTFPRERT*DFVEQS Trigger: TGACTGTTCCACAAAATCCCATGTTCTCTCCCTGGG...GAAAGTTCTGGAGTTAAACCACCCAGCTGGCTTCAGGTTGCCTCTCCTGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR TCA 90 bp | AAGTGGCCCAAGGCAACAGTTCCAAGATGGCCAACCTTGAAGATGCAGGCATGTTCACCTTCCCAGAGATaGTCTGGTCTTGAGCAACTG | + |
|
Preference number: 2 (lower is better) Translates to: KWPKATVPRWPTLKMQACSPSQR*SGLEQL Trigger: CAGTTGCTCAAGACCAGATCATCTCTGGGAAGGTGA...ACATGCCTGCATCTTCAAGGTTGGCCATCTTGGAACTGTTGCCTTGGGCCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR GCA 90 bp | AAGTGGCCCAAGGCAACAGTTCCAAGATGGCCAACCTTGAAGATGCAGGCATGTGGTGGCCCCATGAAATaGCAGATGCCATGTCTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: KWPKATVPRWPTLKMQACGGPMK*QMPCLE Trigger: TTCAAGACATGGCATCTGGCATTTCATGGGGCCACC...ACATGCCTGCATCTTCAAGGTTGGCCATCTTGGAACTGTTGCCTTGGGCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTAGATGACCAGGATAGCTACTGCCCCTCAAAACCAGAAAGCCAGGCAGGAAAGGCTTGGTTTGGGTaGCCCCATGAAATGCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: VLDDQDSYCPSKPESQAGKAWFG*PHEMPD Trigger: ATCTGGCATTTCATGGGGCCACCCAAACCAAGCCTT...TCCTGCCTGGCTTTCTGGTTTTGAGGGGCAGTAGCTATCCTGGTCATCTAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR CAA 90 bp | TCTCTCCCATCTCCCATTCATATTAGTCTCCTCACAAGGCTTGGTTaGGGTGGCCCCATGAAATGCCAGATGCCATGTCTTGAAATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SLPSPIHISLLTRLG*GGPMKCQMPCLEMG Trigger: GCCCATTTCAAGACATGGCATCTGGCATTTCATGGGGCCACCCAAACCAAGCCTTGTGAGGAGACTAATATGAATGGGAGATGGGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGAACTTTCCAGGCAAATACAGGAAAGCTGCTAGTCAGCCTAGGCTACATATTTGTGGAACAGTCATaGGAGAGCCACACTTGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SRTFQANTGKLLVSLGYIFVEQS*ESHTWG Trigger: ACCCCAAGTGTGGCTCTCTCATGACTGTTCCACAAA...TATGTAGCCTAGGCTGACTAGCAGCTTTCCTGTATTTGCCTGGAAAGTTCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR CCA 90 bp | ATTCATATTAGTCTCCTCACAAGGCTTGGTTTGGGTGGCCCCATGAAATGCCAGCTGTCTATCCATTGTTaGCTTGAGGCTGCAGGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: IHISLLTRLGLGGPMKCQLSIHC*LEAAGS Trigger: ACTTCCTGCAGCCTCAAGCCAACAATGGATAGACAG...CTGGCATTTCATGGGGCCACCCAAACCAAGCCTTGTGAGGAGACTAATATGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTAGATGACCAGGATAGCTACTGCCCCTCAAAACCAGAAAGCCAGGCAGGATGCCATGTCTTGAAATaGGCATTCTATCCCAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: VLDDQDSYCPSKPESQAGCHVLK*AFYPKS Trigger: ACTCTTGGGATAGAATGCCCATTTCAAGACATGGCA...TCCTGCCTGGCTTTCTGGTTTTGAGGGGCAGTAGCTATCCTGGTCATCTAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR GCA 90 bp | GCCATCTTAAATGGCCTATACACTTTTATTTGGGATATTCAAAGCCAAGGTATATCCTATCTCTGGCTCTaGCTTCTCAGCTGGCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: AILNGLYTFIWDIQSQGISYLWL*LLSWQK Trigger: CTTCTGCCAGCTGAGAAGGCAGAGCCAGAGATAGGA...TATACCTTGGCTTTGAATATCCCAAATAAAAGTGTATAGGCCATTTAAGATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR CCA 90 bp | TTTATTTGGGATATTCAAAGCCAAGGTATAGGAAGGAGATCAAGTGAAAGGGAAGTAAAATCCTATCTCTaGCTCTGCCTTCTCAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: FIWDIQSQGIGRRSSEREVKSYL*LCLLSW Trigger: CCAGCTGAGAAGGCAGAGCCAGAGATAGGATTTTAC...TTCCCTTTCACTTGATCTCCTTCCTATACCTTGGCTTTGAATATCCCAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR CCA 90 bp | GCCATCTTAAATGGCCTATACACTTTTATTTGGGATATTCAAAGCCAAGGTATAGTGAAAGGGAAAGAATaGGAAGTGGCCCAAGGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: AILNGLYTFIWDIQSQGIVKGKE*EVAQGN Trigger: GTTGCCTTGGGCCACTTCCCATTCTTTCCCTTTCAC...TATACCTTGGCTTTGAATATCCCAAATAAAAGTGTATAGGCCATTTAAGATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR TCA 72 bp | AGTGGCCCAAGGCAACAGTTCCAAGATGGCCAACCTTaGAGATGCAGGCATGTCCGCTGGCTGTGTAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGPRQQFQDGQP*RCRHVRWLCSR Trigger: CCTGCTACACAGCCAGCGGACATGCCTGCATCTTCAAGGTTGGCCATCTTGGAACTGTTGCCTTGGGCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGCAGGAGAGGCAACCTGAAGCCAGCTGGGTGGTTTAACTCCAGAACTTTCCTGTATCAAAGGTACTaGCTGCCAAGGCTGACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PGRRGNLKPAGWFNSRTFLYQRY*LPRLTA Trigger: GGCTGTCAGCCTTGGCAGCAAGTACCTTTGATACAG...GAAAGTTCTGGAGTTAAACCACCCAGCTGGCTTCAGGTTGCCTCTCCTGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR CCA 72 bp | GTTCAAAGACCTTTCCCATGGTCTGGCCCTGGAACCTaGAAGGCCCAGGGAGAGAACATGGGATTTTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VQRPFPWSGPGT*KAQGENMGFCG Trigger: TCCACAAAATCCCATGTTCTCTCCCTGGGCCTTCCAGGTTCCAGGGCCAGACCATGGGAAAGGTCTTTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR CCA 72 bp | AAGAATGGGAAGTGGCCCAAGGCAACAGTTCCAAGATaGCCAACCTTGAAGATGCAGGCATGTCCGCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KNGKWPKATVPR*PTLKMQACPLA Trigger: AGCCAGCGGACATGCCTGCATCTTCAAGGTTGGCCATCTTGGAACTGTTGCCTTGGGCCACTTCCCATTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR CCA 72 bp | AACCTGGAAGGCCCAGGGAGAGAACATGGGATTTTGTaGAACAGTCATGAGAGAGCCACACTTGGGGTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: NLEGPGREHGIL*NSHERATLGVD Trigger: GTCAACCCCAAGTGTGGCTCTCTCATGACTGTTCCACAAAATCCCATGTTCTCTCCCTGGGCCTTCCAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR CCA 72 bp | TCAGCGATACGATGTCTTGCAACAATTCATGGAGGTTaGGGGGAGATTTGCTGCCTGCCTCTCTCCCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: SAIRCLATIHGG*GEICCLPLSHL Trigger: GAGATGGGAGAGAGGCAGGCAGCAAATCTCCCCCCAACCTCCATGAATTGTTGCAAGACATCGTATCGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR CCA 72 bp | AAGCCAGGCAGGAGAGGCAACCTGAAGCCAGCTGGGTaGTTTAACTCCAGAACTTTCCAGGCAAATACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KPGRRGNLKPAG*FNSRTFQANTG Trigger: TCCTGTATTTGCCTGGAAAGTTCTGGAGTTAAACCACCCAGCTGGCTTCAGGTTGCCTCTCCTGCCTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR TCA 72 bp | CAACTGAATCTTGGGTTAGAGACTACAGGAAAGAGCTaGAGCTCCCGAGCAGGAGCAAGAGGACTGTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: QLNLGLETTGKS*SSRAGARGLSV Trigger: GACAGACAGTCCTCTTGCTCCTGCTCGGGAGCTTCAGCTCTTTCCTGTAGTCTCTAACCCAAGATTCAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR GCA 72 bp | CTCCTCACAAGGCTTGGTTTGGGTGGCCCCATGAAATaGCAGATGCCATGTCTTGAAATGGGCATTCTATCC | + |
|
Preference number: 3 (lower is better) Translates to: LLTRLGLGGPMK*QMPCLEMGILS Trigger: GGATAGAATGCCCATTTCAAGACATGGCATCTGGCATTTCATGGGGCCACCCAAACCAAGCCTTGTGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR TCA 72 bp | TTTGGGTGGCCCCATGAAATGCCAGATGCCATGTCTTaGAATGGGCATTCTATCCCAAGAGTGGAGGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: FGWPHEMPDAMS*NGHSIPRVEGR Trigger: TCTTCCCTCCACTCTTGGGATAGAATGCCCATTTCAAGACATGGCATCTGGCATTTCATGGGGCCACCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR TCA 72 bp | TTAGTCTCCTCACAAGGCTTGGTTTGGGTGGCCCCATaGAATGCCAGATGCCATGTCTTGAAATGGGCATTC | + |
|
Preference number: 3 (lower is better) Translates to: LVSSQGLVWVAP*NARCHVLKWAF Trigger: GAATGCCCATTTCAAGACATGGCATCTGGCATTTCATGGGGCCACCCAAACCAAGCCTTGTGAGGAGACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR CCA 72 bp | CTAGTAAAATCCTATCTCTGGCTCTGCCTTCTCAGCTaGCAGAAGTCAGTAATCTCTGAGAGGGGAGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LVKSYLWLCLLS*QKSVISERGGY Trigger: GTACCCTCCCCTCTCAGAGATTACTGACTTCTGCCAGCTGAGAAGGCAGAGCCAGAGATAGGATTTTACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR TCA 72 bp | TTCCTGTCTCCATCCGAACCTTCACCTTCCCAGAGATaGTCTGGTCTTGAGCAACTGAATCTTGGGTTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FLSPSEPSPSQR*SGLEQLNLGLE Trigger: CTCTAACCCAAGATTCAGTTGCTCAAGACCAGATCATCTCTGGGAAGGTGAAGGTTCGGATGGAGACAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR CCA 72 bp | ACAGGAGATAAAAGCTTTCTAGTAAAATCCTATCTCTaGCTCTGCCTTCTCAGCTGGCAGAAGTCAGTAATC | + |
|
Preference number: 3 (lower is better) Translates to: TGDKSFLVKSYL*LCLLSWQKSVI Trigger: GATTACTGACTTCTGCCAGCTGAGAAGGCAGAGCCAGAGATAGGATTTTACTAGAAAGCTTTTATCTCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR-3UTR CAA 90 bp | TGTATAATGACAATCTGCCACCTGAAGTTACTGAGGGGGTTTGTCAACCCTCCTCCTATACACTTTTATTaGGGATATTCAAAGCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: CIMTICHLKLLRGFVNPPPIHFY*GYSKPR Trigger: CCTTGGCTTTGAATATCCCAAATAAAAGTGTATAGG...AGGAGGGTTGACAAACCCCCTCAGTAACTTCAGGTGGCAGATTGTCATTATACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR CCA 72 bp | CCCCAGGCCATCTTAAATGGCCTATACACTTTTATTTaGGATATTCAAAGCCAAGGTATAGGAAGGAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: PQAILNGLYTFI*DIQSQGIGRRS Trigger: TGATCTCCTTCCTATACCTTGGCTTTGAATATCCCAAATAAAAGTGTATAGGCCATTTAAGATGGCCTGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CCA 90 bp | ATGACCAGGATAGCTACTGCCCCTCAAAACCAGAAAGCCAGGCAGGAGAGGCAAGGTATAGGAGCCAGCTaGGAGGGGCACCTCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: MTRIATAPQNQKARQERQGIGAS*EGHLTP Trigger: TGGTGTGAGGTGCCCCTCCCAGCTGGCTCCTATACC...TTGCCTCTCCTGCCTGGCTTTCTGGTTTTGAGGGGCAGTAGCTATCCTGGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR GCA 90 bp | CGTGTGGGCTTCCCCACCACTTCCTGTCTCCATCCGAACCTTCACCTTCCCAGATGCGTTCTTTTGTGCTaGCTGAGATGGTCAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVGFPTTSCLHPNLHLPRCVLLC*LRWSDL Trigger: GAGATCTGACCATCTCAGGCAGCACAAAAGAACGCA...TCTGGGAAGGTGAAGGTTCGGATGGAGACAGGAAGTGGTGGGGAAGCCCACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR TCA 90 bp | ATTCATATTAGTCTCCTCACAAGGCTTGGTTTGGGTGGCCCCATGAAATGCCAGCCTGGTTGCCCCTCTTaGAGTACTGGGGCTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IHISLLTRLGLGGPMKCQPGCPS*STGALC Trigger: GCAGAGAGCCCCAGTACTTCAAGAGGGGCAACCAGG...CTGGCATTTCATGGGGCCACCCAAACCAAGCCTTGTGAGGAGACTAATATGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| 3UTR CAA 72 bp | TGGAACCTGGAAGGCCCAGGGAGAGAACATGGGATTTaGTGGAACAGTCATGAGAGAGCCACACTTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WNLEGPGREHGI*WNSHERATLGV Trigger: AACCCCAAGTGTGGCTCTCTCATGACTGTTCCACAAAATCCCATGTTCTCTCCCTGGGCCTTCCAGGTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR TCA 90 bp | GTTCTAGATGACCAGGATAGCTACTGCCCCTCAAAACCAGAAAGCCAGGCAGGAGCAGACATAAGGCCTTaGAACTGGGGACTGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLDDQDSYCPSKPESQAGADIRP*NWGLSP Trigger: AGGAGACAGTCCCCAGTTTCAAGGCCTTATGTCTGC...TCCTGCCTGGCTTTCTGGTTTTGAGGGGCAGTAGCTATCCTGGTCATCTAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR GCA 90 bp | ATGACCAGGATAGCTACTGCCCCTCAAAACCAGAAAGCCAGGCAGGAGAGGCAAGGAGCATCTCAGGATTaGAGGGATTTATGGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MTRIATAPQNQKARQERQGASQD*RDLWSA Trigger: TGCACTCCATAAATCCCTGCAATCCTGAGATGCTCC...TTGCCTCTCCTGCCTGGCTTTCTGGTTTTGAGGGGCAGTAGCTATCCTGGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR GCA 90 bp | TTTCTAGTAAAATCCTATCTCTGGCTCTGCCTTCTCAGCTGGCAGAAGTCAGTAAGTACTGGGGCTCTCTaGCCCCTCTGGAGCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLVKSYLWLCLLSWQKSVSTGAL*PLWSRC Trigger: ACACCTGCTCCAGAGGGGGCAGAGAGCCCCAGTACT...TACTGACTTCTGCCAGCTGAGAAGGCAGAGCCAGAGATAGGATTTTACTAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CCA 90 bp | AAGTGGCCCAAGGCAACAGTTCCAAGATGGCCAACCTTGAAGATGCAGGCATGTTTGCTGGAACCTAGCTaGGAGCATCTCAGGATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KWPKATVPRWPTLKMQACLLEPS*EHLRIA Trigger: TGCAATCCTGAGATGCTCCCAGCTAGGTTCCAGCAA...ACATGCCTGCATCTTCAAGGTTGGCCATCTTGGAACTGTTGCCTTGGGCCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CCA 90 bp | TTTATTTGGGATATTCAAAGCCAAGGTATAGGAAGGAGATCAAGTGAAAGGGAAGCTCTCTGCCCCCTCTaGAGCAGGTGTGGGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FIWDIQSQGIGRRSSEREALCPL*SRCGRL Trigger: GAGCCGCCCACACCTGCTCCAGAGGGGGCAGAGAGC...TTCCCTTTCACTTGATCTCCTTCCTATACCTTGGCTTTGAATATCCCAAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR GCA 90 bp | CCCATTCATATTAGTCTCCTCACAAGGCTTGGTTTGGGTGGCCCCATGAAATGCTCACACCTGTGTGTTTaGGTTGGTGACTCACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PIHISLLTRLGLGGPMKCSHLCV*VGDSQG Trigger: ACCTTGTGAGTCACCAACGCAAACACACAGGTGTGA...GCATTTCATGGGGCCACCCAAACCAAGCCTTGTGAGGAGACTAATATGAATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR GCA 90 bp | AAGTGGCCCAAGGCAACAGTTCCAAGATGGCCAACCTTGAAGATGCAGGCATGTAGATGCGTTCTTTTGTaGTGCCTGAGATGGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KWPKATVPRWPTLKMQACRCVLL*CLRWSD Trigger: ATCTGACCATCTCAGGCAGCACAAAAGAACGCATCT...ACATGCCTGCATCTTCAAGGTTGGCCATCTTGGAACTGTTGCCTTGGGCCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CCA 90 bp | ATGACCAGGATAGCTACTGCCCCTCAAAACCAGAAAGCCAGGCAGGAGAGGCAAACGAAAGGTTCTTCCTaGGTATTTGACTCAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: MTRIATAPQNQKARQERQTKGSS*VFDSVT Trigger: TGTGACTGAGTCAAATACCCAGGAAGAACCTTTCGT...TTGCCTCTCCTGCCTGGCTTTCTGGTTTTGAGGGGCAGTAGCTATCCTGGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR GCA 90 bp | TTTCTAGTAAAATCCTATCTCTGGCTCTGCCTTCTCAGCTGGCAGAAGTCAGTATCCGTTCCAGTCACATaGGAAGGGCTTCACACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLVKSYLWLCLLSWQKSVSVPVT*EGLHTC Trigger: ACAGGTGTGAAGCCCTTCGCATGTGACTGGAACGGA...TACTGACTTCTGCCAGCTGAGAAGGCAGAGCCAGAGATAGGATTTTACTAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CCA 90 bp | GTTCTAGATGACCAGGATAGCTACTGCCCCTCAAAACCAGAAAGCCAGGCAGGAGATTGCAGGGATTTATaGAGTGCAACATCTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLDDQDSYCPSKPESQAGDCRDL*SATSDP Trigger: TGGATCAGATGTTGCACTCCATAAATCCCTGCAATC...TCCTGCCTGGCTTTCTGGTTTTGAGGGGCAGTAGCTATCCTGGTCATCTAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR TCA 90 bp | AGCTGGCAGAAGTCAGTAATCTCTGAGAGGGGAGGGTACCAGATTTTGAGAAACCGACCTAATGAGCTGTaGTTCCCATTCTCTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SWQKSVISERGGYQILRNRPNEL*FPFSLI Trigger: AATGAGAGAGAATGGGAATCACAGCTCATTAGGTCG...GTTTCTCAAAATCTGGTACCCTCCCCTCTCAGAGATTACTGACTTCTGCCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR TCA 90 bp | TCCAGAACTTTCCAGGCAAATACAGGAAAGCTGCTAGTCAGCCTAGGCTACATAGCATTAGATTCTCACTaGAGGAAATGGTCACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRTFQANTGKLLVSLGYIALDSH*RKWSLP Trigger: TGGGAGTGACCATTTCCTTCAGTGAGAATCTAATGC...TATGTAGCCTAGGCTGACTAGCAGCTTTCCTGTATTTGCCTGGAAAGTTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CCA 90 bp | ATTCATATTAGTCTCCTCACAAGGCTTGGTTTGGGTGGCCCCATGAAATGCCAGGTCACAAGTGAATCTTaGGAGTCTAAAGGTAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: IHISLLTRLGLGGPMKCQVTSES*ESKGSN Trigger: ATTGCTACCTTTAGACTCCCAAGATTCACTTGTGAC...CTGGCATTTCATGGGGCCACCCAAACCAAGCCTTGTGAGGAGACTAATATGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CCA 90 bp | AGATGCCATGTCTTGAAATGGGCATTCTATCCCAAGAGTGGAGGGAAGAGACCACTCATCGCATTTATGTaGTCGGTATCTGGTATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RCHVLKWAFYPKSGGKRPLIAFM*SVSGMN Trigger: ATTCATACCAGATACCGACCACATAAATGCGATGAG...TGGTCTCTTCCCTCCACTCTTGGGATAGAATGCCCATTTCAAGACATGGCATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CCA 90 bp | TTTATTTGGGATATTCAAAGCCAAGGTATAGGAAGGAGATCAAGTGAAAGGGAAGTATTGAGTGGCTGGTaGCTGATGAAATCCGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FIWDIQSQGIGRRSSEREVLSGW*LMKSAV Trigger: AACAGCGGATTTCATCAGCCACCAGCCACTCAATAC...TTCCCTTTCACTTGATCTCCTTCCTATACCTTGGCTTTGAATATCCCAAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CCA 90 bp | GCCATCTTAAATGGCCTATACACTTTTATTTGGGATATTCAAAGCCAAGGTATAAAAGGTAGCAATTGCTaGAACCTAGCTGGGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: AILNGLYTFIWDIQSQGIKGSNC*NLAGSI Trigger: GATGCTCCCAGCTAGGTTCCAGCAATTGCTACCTTT...TATACCTTGGCTTTGAATATCCCAAATAAAAGTGTATAGGCCATTTAAGATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS TCA 90 bp | GCTGGGAGCATCTCAGGATTGCAGGGATTTATGGAGTGCAACATCTaGTCCATAAACGGAGCCACAGCATGGGTCCCAGCGGAAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: AGSISGLQGFMECNI*SINGATAWVPAEAM Trigger: CATGGCTTCCGCTGGGACCCATGCTGTGGCTCCGTTTATGGATCAGATGTTGCACTCCATAAATCCCTGCAATCCTGAGATGCTCCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS GCA 90 bp | TTCTGGAAAGGTATAGGAGCCAGCTGGGAGGGGCACCTCACACCATaGTCAGGCAGCGACCTAATGAGCTGTGATTCCCATTCTCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FWKGIGASWEGHLTP*SGSDLMSCDSHSLS Trigger: TGAGAGAGAATGGGAATCACAGCTCATTAGGTCGCTGCCTGAGCATGGTGTGAGGTGCCCCTCCCAGCTGGCTCCTATACCTTTCCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CAA 90 bp | AGATGCCATGTCTTGAAATGGGCATTCTATCCCAAGAGTGGAGGGAAGAGACCAAGACTCCACGGGAACTaGGCAGGCCACCCTGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RCHVLKWAFYPKSGGKRPRLHGN*AGHPEA Trigger: TGCCTCAGGGTGGCCTGCCAAGTTCCCGTGGAGTCT...TGGTCTCTTCCCTCCACTCTTGGGATAGAATGCCCATTTCAAGACATGGCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS TCA 90 bp | CTATGGGCCATCACTGAGACTCCACGGGAACTTGGCAGGCCACCCTaGGGCATTAGATTCTCACTGAAGGAAATGGTCACTCCCAGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LWAITETPRELGRPP*GIRFSLKEMVTPRV Trigger: TACTCTGGGAGTGACCATTTCCTTCAGTGAGAATCTAATGCCTCAGGGTGGCCTGCCAAGTTCCCGTGGAGTCTCAGTGATGGCCCATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CAA 90 bp | AGTGGAGGGAAGAGACCAACTCTGGGCATGCGGACAGTGAAGGCCAGAGAGAATACCTGTGTGTTTGCGTaGGTGACTCACAAGGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGGKRPTLGMRTVKARENTCVFA*VTHKVR Trigger: TCTCACCTTGTGAGTCACCAACGCAAACACACAGGT...ATTCTCTCTGGCCTTCACTGTCCGCATGCCCAGAGTTGGTCTCTTCCCTCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS CCA 90 bp | CCCTCTGGAGCAGGTGTGGGCGGCTCACGTACGAAAGGTTCTTCCTaGGTATTTGACTCAGTCACAAGTGAATCTTGGGAGTCTAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSGAGVGGSRTKGSS*VFDSVTSESWESKG Trigger: ACCTTTAGACTCCCAAGATTCACTTGTGACTGAGTCAAATACCCAGGAAGAACCTTTCGTACGTGAGCCGCCCACACCTGCTCCAGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CAA 90 bp | AAGTGGCCCAAGGCAACAGTTCCAAGATGGCCAACCTTGAAGATGCAGGCATGTTGCAGACATAAGGCCTaGAAACTGGGGACTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KWPKATVPRWPTLKMQACCRHKA*KLGTVS Trigger: GGAGACAGTCCCCAGTTTCAAGGCCTTATGTCTGCA...ACATGCCTGCATCTTCAAGGTTGGCCATCTTGGAACTGTTGCCTTGGGCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CAA 90 bp | TCCAGAACTTTCCAGGCAAATACAGGAAAGCTGCTAGTCAGCCTAGGCTACATAGGGACTGTCTCCTGGTaGCCCCTCTTGAAGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRTFQANTGKLLVSLGYIGTVSW*PLLKYW Trigger: CCAGTACTTCAAGAGGGGCAACCAGGAGACAGTCCC...TATGTAGCCTAGGCTGACTAGCAGCTTTCCTGTATTTGCCTGGAAAGTTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CAA 90 bp | CCCATTCATATTAGTCTCCTCACAAGGCTTGGTTTGGGTGGCCCCATGAAATGCGGCAGATGCGTTCTTTaGTGCTGCCTGAGATGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PIHISLLTRLGLGGPMKCGRCVL*CCLRWS Trigger: TGACCATCTCAGGCAGCACAAAAGAACGCATCTGCC...GCATTTCATGGGGCCACCCAAACCAAGCCTTGTGAGGAGACTAATATGAATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS GCA 90 bp | TACATCCGTTCCAGTCACATGCGAAGGGCTTCACACCTGTGTGTTTaGGTTGGTGACTCACAAGGTGAGAGCGCTTGGTATAAGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YIRSSHMRRASHLCV*VGDSQGESAWYKIF Trigger: GAAAATCTTATACCAAGCGCTCTCACCTTGTGAGTCACCAACGCAAACACACAGGTGTGAAGCCCTTCGCATGTGACTGGAACGGATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS CCA 90 bp | GACTCAGTCACAAGTGAATCTTGGGAGTCTAAAGGTAGCAATTGCTaGAACCTAGCTGGGAGCATCTCAGGATTGCAGGGATTTATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DSVTSESWESKGSNC*NLAGSISGLQGFME Trigger: CTCCATAAATCCCTGCAATCCTGAGATGCTCCCAGCTAGGTTCCAGCAATTGCTACCTTTAGACTCCCAAGATTCACTTGTGACTGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS GCA 90 bp | TTTGACTCAGTCACAAGTGAATCTTGGGAGTCTAAAGGTAGCAATTaGTGGAACCTAGCTGGGAGCATCTCAGGATTGCAGGGATTTATG | + |
|
Preference number: 5 (lower is better) Translates to: FDSVTSESWESKGSN*WNLAGSISGLQGFM Trigger: CATAAATCCCTGCAATCCTGAGATGCTCCCAGCTAGGTTCCAGCAATTGCTACCTTTAGACTCCCAAGATTCACTTGTGACTGAGTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CAA 90 bp | TTTATTTGGGATATTCAAAGCCAAGGTATAGGAAGGAGATCAAGTGAAAGGGAATCCTGGTTGCCCCTCTaGAAGTACTGGGGCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FIWDIQSQGIGRRSSERESWLPL*KYWGSL Trigger: CAGAGAGCCCCAGTACTTCAAGAGGGGCAACCAGGA...TTCCCTTTCACTTGATCTCCTTCCTATACCTTGGCTTTGAATATCCCAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CAA 90 bp | ATGAAATGCCAGATGCCATGTCTTGAAATGGGCATTCTATCCCAAGAGTGGAGGGTTCTTCCTGGGTATTaGACTCAGTCACAAGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: MKCQMPCLEMGILSQEWRVLPGY*TQSQVN Trigger: ATTCACTTGTGACTGAGTCAAATACCCAGGAAGAAC...CCTCCACTCTTGGGATAGAATGCCCATTTCAAGACATGGCATCTGGCATTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS-3UTR CAA 90 bp | GCCATCTTAAATGGCCTATACACTTTTATTTGGGATATTCAAAGCCAAGGTATATCCCATTCTCTCTCATaGCATCTGAGCTCCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AILNGLYTFIWDIQSQGISHSLS*HLSSSA Trigger: AGCTGAGGAGCTCAGATGCAATGAGAGAGAATGGGA...TATACCTTGGCTTTGAATATCCCAAATAAAAGTGTATAGGCCATTTAAGATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS TCA 72 bp | ATAAGGCATTGCTGGGGCACTGCTATGGGCCATCACTaGGACTCCACGGGAACTTGGCAGGCCACCCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: IRHCWGTAMGHH*DSTGTWQATLR Trigger: CCTCAGGGTGGCCTGCCAAGTTCCCGTGGAGTCTCAGTGATGGCCCATAGCAGTGCCCCAGCAATGCCTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS CCA 72 bp | AAGTACTGGGGCTCTCTGCCCCCTCTGGAGCAGGTGTaGGCGGCTCACGTACGAAAGGTTCTTCCTGGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: KYWGSLPPLEQV*AAHVRKVLPGY Trigger: ATACCCAGGAAGAACCTTTCGTACGTGAGCCGCCCACACCTGCTCCAGAGGGGGCAGAGAGCCCCAGTACTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS GCA 72 bp | GGTATAGGAGCCAGCTGGGAGGGGCACCTCACACCATaGTCAGGCAGCGACCTAATGAGCTGTGATTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GIGASWEGHLTP*SGSDLMSCDSH Trigger: ATGGGAATCACAGCTCATTAGGTCGCTGCCTGAGCATGGTGTGAGGTGCCCCTCCCAGCTGGCTCCTATACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS TCA 72 bp | CCTCACACCATGCTCAGGCAGCGACCTAATGAGCTGTaGTTCCCATTCTCTCTCATTGCATCTGAGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PHTMLRQRPNEL*FPFSLIASELL Trigger: GAGGAGCTCAGATGCAATGAGAGAGAATGGGAATCACAGCTCATTAGGTCGCTGCCTGAGCATGGTGTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS TCA 72 bp | ATTCTCACTGAAGGAAATGGTCACTCCCAGAGTACCTaGACTTCCAACTGGCATCACGTGGGATCCCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: ILTEGNGHSQST*TSNWHHVGSPP Trigger: GGGAGGGGATCCCACGTGATGCCAGTTGGAAGTTCAGGTACTCTGGGAGTGACCATTTCCTTCAGTGAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS TCA 72 bp | ATCACTGAGACTCCACGGGAACTTGGCAGGCCACCCTaGGGCATTAGATTCTCACTGAAGGAAATGGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: ITETPRELGRPP*GIRFSLKEMVT Trigger: AGTGACCATTTCCTTCAGTGAGAATCTAATGCCTCAGGGTGGCCTGCCAAGTTCCCGTGGAGTCTCAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS TCA 72 bp | ATCTCAGGATTGCAGGGATTTATGGAGTGCAACATCTaGTCCATAAACGGAGCCACAGCATGGGTCCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ISGLQGFMECNI*SINGATAWVPA Trigger: CGCTGGGACCCATGCTGTGGCTCCGTTTATGGATCAGATGTTGCACTCCATAAATCCCTGCAATCCTGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS TCA 72 bp | AACTTGGCAGGCCACCCTGAGGCATTAGATTCTCACTaGAGGAAATGGTCACTCCCAGAGTACCTGAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: NLAGHPEALDSH*RKWSLPEYLNF Trigger: GAAGTTCAGGTACTCTGGGAGTGACCATTTCCTTCAGTGAGAATCTAATGCCTCAGGGTGGCCTGCCAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS CAA 90 bp | GAGCAGGTGTGGGCGGCTCACGTACGAAAGGTTCTTCCTGGGTATTaGACTCAGTCACAAGTGAATCTTGGGAGTCTAAAGGTAGCAATT | + |
|
Preference number: 6 (lower is better) Translates to: EQVWAAHVRKVLPGY*TQSQVNLGSLKVAI Trigger: AATTGCTACCTTTAGACTCCCAAGATTCACTTGTGACTGAGTCAAATACCCAGGAAGAACCTTTCGTACGTGAGCCGCCCACACCTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS GCA 72 bp | GTCACAAGTGAATCTTGGGAGTCTAAAGGTAGCAATTaGTGGAACCTAGCTGGGAGCATCTCAGGATTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VTSESWESKGSN*WNLAGSISGLQ Trigger: CTGCAATCCTGAGATGCTCCCAGCTAGGTTCCAGCAATTGCTACCTTTAGACTCCCAAGATTCACTTGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS CCA 72 bp | ACAAGTGAATCTTGGGAGTCTAAAGGTAGCAATTGCTaGAACCTAGCTGGGAGCATCTCAGGATTGCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: TSESWESKGSNC*NLAGSISGLQG Trigger: TCCCTGCAATCCTGAGATGCTCCCAGCTAGGTTCCAGCAATTGCTACCTTTAGACTCCCAAGATTCACTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS CAA 72 bp | TGGGCGGCTCACGTACGAAAGGTTCTTCCTGGGTATTaGACTCAGTCACAAGTGAATCTTGGGAGTCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: WAAHVRKVLPGY*TQSQVNLGSLK Trigger: CTTTAGACTCCCAAGATTCACTTGTGACTGAGTCAAATACCCAGGAAGAACCTTTCGTACGTGAGCCGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||
| CDS CCA 72 bp | TGTGTTTGCGTTGGTGACTCACAAGGTGAGAGCGCTTaGTATAAGATTTTCCACAGCTGTTATATGTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CVCVGDSQGESA*YKIFHSCYMCR Trigger: TCTGCACATATAACAGCTGTGGAAAATCTTATACCAAGCGCTCTCACCTTGTGAGTCACCAACGCAAACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062747.6 |
||