Pregenerated sensors for KLF14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073209Ensembl transcript IDs: ENSMUST00000101589.5
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGCTGCCACCCTGGACACCCTCTCCAAAGTCCGCCCTGGCCAATaGGTGAGACACCAGAGTCATTTGGAACTGGGAGATCCTCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: KAATLDTLSKVRPGQ*VRHQSHLELGDPPA Trigger: TGCTGGAGGATCTCCCAGTTCCAAATGACTCTGGTGTCTCACCCATTGGCCAGGGCGGACTTTGGAGAGGGTGTCCAGGGTGGCAGCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR CCA 90 bp | AGATCCTCCAGCATCTCAGAATTCAGTTTTACATCTCTGGTGCCATaGAGGGAAGAAACTTCAGTACGCTGGAGAGTTCATCCCTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: RSSSISEFSFTSLVP*REETSVRWRVHPFS Trigger: TGAGAAGGGATGAACTCTCCAGCGTACTGAAGTTTCTTCCCTCCATGGCACCAGAGATGTAAAACTGAATTCTGAGATGCTGGAGGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR GCA 90 bp | AGAAACTTCAGTACGCTGGAGAGTTCATCCCTTCTCAAAGGTTCCTaGAGGCTGTTTGGAAGAAACCGTTCATTTCAGAAGATGTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: RNFSTLESSSLLKGS*RLFGRNRSFQKMFV Trigger: CACAAACATCTTCTGAAATGAACGGTTTCTTCCAAACAGCCTGCAGGAACCTTTGAGAAGGGATGAACTCTCCAGCGTACTGAAGTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR CCA 90 bp | ACACACACGTACACACAAACATCAGTGATTTCAATCCACAGTAGCTaGGACACACAACAGAAGAATACTTCTGATATCTTATTCCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: THTYTQTSVISIHSS*DTQQKNTSDILFLQ Trigger: TTGAAGGAATAAGATATCAGAAGTATTCTTCTGTTGTGTGTCCCAGCTACTGTGGATTGAAATCACTGATGTTTGTGTGTACGTGTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR CAA 90 bp | CCTGCTATCTTCTGGCTCCCAGTCCCTCTCCAGAGTCCGACAAGTTaGTCTGAACCCATCCCCAGTGCGGAGCAACCAGTCTGTACCTCG | + |
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Preference number: 2 (lower is better) Translates to: PAIFWLPVPLQSPTS*SEPIPSAEQPVCTS Trigger: CGAGGTACAGACTGGTTGCTCCGCACTGGGGATGGGTTCAGACAAACTTGTCGGACTCTGGAGAGGGACTGGGAGCCAGAAGATAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR-3UTR CCA 90 bp | GGTAGGGTGAGAACATGGGAACACAATCACAAAGGAACACCATTTAAAAGTCAAGCATGGACAACGGCCTaGGGGGCAGCGGGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GRVRTWEHNHKGTPFKSQAWTTA*GAAGVG Trigger: CCCCACCCCCGCTGCCCCCCAGGCCGTTGTCCATGC...TTGACTTTTAAATGGTGTTCCTTTGTGATTGTGTTCCCATGTTCTCACCCTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR-3UTR TCA 90 bp | GTGAGACACCAGAGTCATTTGGAACTGGGAGATCCTCCAGCATCTCAGAATTCATCCGACAAGTTTGTCTaGACCCATCCCCAGTGCGGA | + |
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Preference number: 2 (lower is better) Translates to: VRHQSHLELGDPPASQNSSDKFV*THPQCG Trigger: TCCGCACTGGGGATGGGTTCAGACAAACTTGTCGGA...TGAATTCTGAGATGCTGGAGGATCTCCCAGTTCCAAATGACTCTGGTGTCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCTCACCCACCAATTCACCTGTAACAGAAACAACAATGTACAGACCTTCACTCCAAAGTCCGCCCTaGCCAATGGGTGAGACACCA | + |
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Preference number: 2 (lower is better) Translates to: SPSPTNSPVTETTMYRPSLQSPP*PMGETP Trigger: TGGTGTCTCACCCATTGGCCAGGGCGGACTTTGGAG...TGAAGGTCTGTACATTGTTGTTTCTGTTACAGGTGAATTGGTGGGTGAGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGATCATAGGGGACCTCATCGGGTTAGGAAAGGCCTTTCAGCCTCATATTTACAAAGCAGAGGTAGCTaGGGCAATCGGGAGAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: GDHRGPHRVRKGLSASYLQSRGS*GNRESQ Trigger: TTGACTCTCCCGATTGCCCCAGCTACCTCTGCTTTG...TAAATATGAGGCTGAAAGGCCTTTCCTAACCCGATGAGGTCCCCTATGATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR CAA 90 bp | CTCTCCAAAGTCCGCCCTGGCCAATGGGTGAGACACCAGAGTCATTaGGAACTGGGAGATCCTCCAGCATCTCAGAATTCAGTTTTACAT | + |
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Preference number: 2 (lower is better) Translates to: LSKVRPGQWVRHQSH*ELGDPPASQNSVLH Trigger: ATGTAAAACTGAATTCTGAGATGCTGGAGGATCTCCCAGTTCCAAATGACTCTGGTGTCTCACCCATTGGCCAGGGCGGACTTTGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR CAA 90 bp | TGCAGGCTGTTTGGAAGAAACCGTTCATTTCAGAAGATGTTTGTGTaGCAGGACTTCCTGCTATCTTCTGGCTCCCAGTCCCTCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: CRLFGRNRSFQKMFV*QDFLLSSGSQSLSR Trigger: TCTGGAGAGGGACTGGGAGCCAGAAGATAGCAGGAAGTCCTGCAACACAAACATCTTCTGAAATGAACGGTTTCTTCCAAACAGCCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR-3UTR TCA 90 bp | CCTGCAGGCTGTTTGGAAGAAACCGTTCATTTCAGAAGATGTTTGTGTTGCAGGGGTGGGGGTTGTGCTTaGGGGAAAGATAGACAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PAGCLEETVHFRRCLCCRGGGCA*GKDRQQ Trigger: TTGCTGTCTATCTTTCCCTCAAGCACAACCCCCACC...CCTGCAACACAAACATCTTCTGAAATGAACGGTTTCTTCCAAACAGCCTGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR CAA 90 bp | GTACGCTGGAGAGTTCATCCCTTCTCAAAGGTTCCTGCAGGCTGTTaGGAAGAAACCGTTCATTTCAGAAGATGTTTGTGTTGCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: VRWRVHPFSKVPAGC*EETVHFRRCLCCRT Trigger: AGTCCTGCAACACAAACATCTTCTGAAATGAACGGTTTCTTCCAAACAGCCTGCAGGAACCTTTGAGAAGGGATGAACTCTCCAGCGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR-3UTR GCA 90 bp | GTGAGACACCAGAGTCATTTGGAACTGGGAGATCCTCCAGCATCTCAGAATTCACTTCTCAAAGGTTCCTaGAGGCTGTTTGGAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: VRHQSHLELGDPPASQNSLLKGS*RLFGRN Trigger: GTTTCTTCCAAACAGCCTGCAGGAACCTTTGAGAAG...TGAATTCTGAGATGCTGGAGGATCTCCCAGTTCCAAATGACTCTGGTGTCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGATCATAGGGGACCTCATCGGGTTAGGAAAGGCCTTTCAGCCTCATATTTATCAATCCACAGTAGCTaGGACACACAACAGAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: GDHRGPHRVRKGLSASYLSIHSS*DTQQKN Trigger: ATTCTTCTGTTGTGTGTCCCAGCTACTGTGGATTGA...TAAATATGAGGCTGAAAGGCCTTTCCTAACCCGATGAGGTCCCCTATGATCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR-3UTR GCA 90 bp | GGGGATCATAGGGGACCTCATCGGGTTAGGAAAGGCCTTTCAGCCTCATATTTAAGAAGATGTTTGTGTTaGAGGACTTCCTGCTATCTT | + |
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Preference number: 2 (lower is better) Translates to: GDHRGPHRVRKGLSASYLRRCLC*RTSCYL Trigger: AAGATAGCAGGAAGTCCTGCAACACAAACATCTTCT...TAAATATGAGGCTGAAAGGCCTTTCCTAACCCGATGAGGTCCCCTATGATCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR-3UTR CCA 90 bp | CATTTGGAACTGGGAGATCCTCCAGCATCTCAGAATTCAGTTTTACATCTCTGGGAAACTTCAGTACGCTaGAGAGTTCATCCCTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: HLELGDPPASQNSVLHLWETSVR*RVHPFS Trigger: TGAGAAGGGATGAACTCTCCAGCGTACTGAAGTTTC...CCAGAGATGTAAAACTGAATTCTGAGATGCTGGAGGATCTCCCAGTTCCAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCTCACCCACCAATTCACCTGTAACAGAAACAACAATGTACAGACCTTCATCAGTTTTACATCTCTaGTGCCATGGAGGGAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: SPSPTNSPVTETTMYRPSSVLHL*CHGGKK Trigger: TTTCTTCCCTCCATGGCACCAGAGATGTAAAACTGA...TGAAGGTCTGTACATTGTTGTTTCTGTTACAGGTGAATTGGTGGGTGAGGGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR-3UTR GCA 90 bp | TCCCCCTCACCCACCAATTCACCTGTAACAGAAACAACAATGTACAGACCTTCAGCCTTTTCTCTCTTGTaGTGTTATGATTGTTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: SPSPTNSPVTETTMYRPSAFSLL*CYDCFQ Trigger: TTGGAAACAATCATAACAGCACAAGAGAGAAAAGGC...TGAAGGTCTGTACATTGTTGTTTCTGTTACAGGTGAATTGGTGGGTGAGGGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR GCA 72 bp | GGCCTCTCTTCATCCAAATCTGGACATTTCCAAGGCTaGCACCCTGGACACCCTCTCCAAAGTCCGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: GLSSSKSGHFQG*HPGHPLQSPPW Trigger: CCAGGGCGGACTTTGGAGAGGGTGTCCAGGGTGGCAGCCTTGGAAATGTCCAGATTTGGATGAAGAGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR CCA 72 bp | ACCCTGGACACCCTCTCCAAAGTCCGCCCTGGCCAATaGGTGAGACACCAGAGTCATTTGGAACTGGGAGAT | + |
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Preference number: 3 (lower is better) Translates to: TLDTLSKVRPGQ*VRHQSHLELGD Trigger: ATCTCCCAGTTCCAAATGACTCTGGTGTCTCACCCATTGGCCAGGGCGGACTTTGGAGAGGGTGTCCAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR GCA 72 bp | CCTCCAGCATCTCAGAATTCAGTTTTACATCTCTGGTaGCATGGAGGGAAGAAACTTCAGTACGCTGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: PPASQNSVLHLW*HGGKKLQYAGE Trigger: CTCTCCAGCGTACTGAAGTTTCTTCCCTCCATGGCACCAGAGATGTAAAACTGAATTCTGAGATGCTGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR CCA 72 bp | ATTTTCTGTTTCCAAAGGCCTCTCTTCATCCAAATCTaGACATTTCCAAGGCTGCCACCCTGGACACCCTCT | + |
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Preference number: 3 (lower is better) Translates to: IFCFQRPLFIQI*TFPRLPPWTPS Trigger: AGAGGGTGTCCAGGGTGGCAGCCTTGGAAATGTCCAGATTTGGATGAAGAGAGGCCTTTGGAAACAGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR-3UTR CAA 90 bp | GTGAGACACCAGAGTCATTTGGAACTGGGAGATCCTCCAGCATCTCAGAATTCAGTTCCTGCAGGCTGTTaGGAAGAAACCGTTCATTTC | + |
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Preference number: 3 (lower is better) Translates to: VRHQSHLELGDPPASQNSVPAGC*EETVHF Trigger: GAAATGAACGGTTTCTTCCAAACAGCCTGCAGGAAC...TGAATTCTGAGATGCTGGAGGATCTCCCAGTTCCAAATGACTCTGGTGTCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR GCA 72 bp | TTGGAAGAAACCGTTCATTTCAGAAGATGTTTGTGTTaGAGGACTTCCTGCTATCTTCTGGCTCCCAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: LEETVHFRRCLC*RTSCYLLAPSP Trigger: GGGACTGGGAGCCAGAAGATAGCAGGAAGTCCTGCAACACAAACATCTTCTGAAATGAACGGTTTCTTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR CCA 72 bp | GATCCTCCAGCATCTCAGAATTCAGTTTTACATCTCTaGTGCCATGGAGGGAAGAAACTTCAGTACGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: DPPASQNSVLHL*CHGGKKLQYAG Trigger: TCCAGCGTACTGAAGTTTCTTCCCTCCATGGCACCAGAGATGTAAAACTGAATTCTGAGATGCTGGAGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR TCA 72 bp | GTCCCACTCAAAAGTTACTTGGGCTTGCATTCTAGGTaGAGGAGAAGCTATTTCAGACCAGCCTTTTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: VPLKSYLGLHSR*RRSYFRPAFSL Trigger: GAGAGAAAAGGCTGGTCTGAAATAGCTTCTCCTTCACCTAGAATGCAAGCCCAAGTAACTTTTGAGTGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR-3UTR CAA 90 bp | TCCCCCTCACCCACCAATTCACCTGTAACAGAAACAACAATGTACAGACCTTCAGTGAAAAGTGCTGTTTaGTACCTGTCCCACTCAAAA | + |
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Preference number: 3 (lower is better) Translates to: SPSPTNSPVTETTMYRPSVKSAV*YLSHSK Trigger: TTTTGAGTGGGACAGGTACAAAACAGCACTTTTCAC...TGAAGGTCTGTACATTGTTGTTTCTGTTACAGGTGAATTGGTGGGTGAGGGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR CCA 72 bp | AGCATCTCAGAATTCAGTTTTACATCTCTGGTGCCATaGAGGGAAGAAACTTCAGTACGCTGGAGAGTTCAT | + |
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Preference number: 3 (lower is better) Translates to: SISEFSFTSLVP*REETSVRWRVH Trigger: ATGAACTCTCCAGCGTACTGAAGTTTCTTCCCTCCATGGCACCAGAGATGTAAAACTGAATTCTGAGATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR CCA 72 bp | AGTGCTGTTTTGTACCTGTCCCACTCAAAAGTTACTTaGGCTTGCATTCTAGGTGAAGGAGAAGCTATTTCA | + |
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Preference number: 3 (lower is better) Translates to: SAVLYLSHSKVT*ACILGEGEAIS Trigger: TGAAATAGCTTCTCCTTCACCTAGAATGCAAGCCCAAGTAACTTTTGAGTGGGACAGGTACAAAACAGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR CCA 72 bp | TACACACAAACATCAGTGATTTCAATCCACAGTAGCTaGGACACACAACAGAAGAATACTTCTGATATCTTA | + |
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Preference number: 3 (lower is better) Translates to: YTQTSVISIHSS*DTQQKNTSDIL Trigger: TAAGATATCAGAAGTATTCTTCTGTTGTGTGTCCCAGCTACTGTGGATTGAAATCACTGATGTTTGTGTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR CCA 90 bp | GTGAGACACCAGAGTCATTTGGAACTGGGAGATCCTCCAGCATCTCAGAATTCACATGGCTGGGGGTGGTaGCTCAGGGCGGGGAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: VRHQSHLELGDPPASQNSHGWGW*LRAGSA Trigger: CGCACTCCCCGCCCTGAGCCACCACCCCCAGCCATG...TGAATTCTGAGATGCTGGAGGATCTCCCAGTTCCAAATGACTCTGGTGTCTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR CCA 90 bp | GTGAGACACCAGAGTCATTTGGAACTGGGAGATCCTCCAGCATCTCAGAATTCACTCGCAGCCAGCAGGTaGGGCGCGCCATCGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VRHQSHLELGDPPASQNSLAASR*GAPSPS Trigger: AGAAGGCGATGGCGCGCCCCACCTGCTGGCTGCGAG...TGAATTCTGAGATGCTGGAGGATCTCCCAGTTCCAAATGACTCTGGTGTCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR CCA 90 bp | GTGAGACACCAGAGTCATTTGGAACTGGGAGATCCTCCAGCATCTCAGAATTCACACCATGGCTGGGGGTaGTGGCTCAGGGCGGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: VRHQSHLELGDPPASQNSHHGWG*WLRAGS Trigger: ACTCCCCGCCCTGAGCCACCACCCCCAGCCATGGTG...TGAATTCTGAGATGCTGGAGGATCTCCCAGTTCCAAATGACTCTGGTGTCTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR CCA 90 bp | CATCCCCAGTGCGGAGCAACCAGTCTGTACCTCGGTCTAATGACCCTGGAAAATCAGAGCTTTCCACCATaGCTGGGGGTGGTGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: HPQCGATSLYLGLMTLENQSFPP*LGVVAQ Trigger: CTGAGCCACCACCCCCAGCCATGGTGGAAAGCTCTG...ATTTTCCAGGGTCATTAGACCGAGGTACAGACTGGTTGCTCCGCACTGGGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR CCA 90 bp | CCTGCAGGCTGTTTGGAAGAAACCGTTCATTTCAGAAGATGTTTGTGTTGCAGGGGGGACCTGGAGGACTaGGGGTATCCACAGCACCCC | + |
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Preference number: 4 (lower is better) Translates to: PAGCLEETVHFRRCLCCRGDLED*GYPQHP Trigger: GGGGTGCTGTGGATACCCCCAGTCCTCCAGGTCCCC...CCTGCAACACAAACATCTTCTGAAATGAACGGTTTCTTCCAAACAGCCTGCAGG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR CCA 90 bp | CCTGCAGGCTGTTTGGAAGAAACCGTTCATTTCAGAAGATGTTTGTGTTGCAGGGCTTTCCACCATGGCTaGGGGTGGTGGCTCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: PAGCLEETVHFRRCLCCRAFHHG*GWWLRA Trigger: CGCCCTGAGCCACCACCCCCAGCCATGGTGGAAAGC...CCTGCAACACAAACATCTTCTGAAATGAACGGTTTCTTCCAAACAGCCTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR CAA 72 bp | GTCCGCCCTGGCCAATGGGTGAGACACCAGAGTCATTaGGAACTGGGAGATCCTCCAGCATCTCAGAATTCA | + |
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Preference number: 4 (lower is better) Translates to: VRPGQWVRHQSH*ELGDPPASQNS Trigger: TGAATTCTGAGATGCTGGAGGATCTCCCAGTTCCAAATGACTCTGGTGTCTCACCCATTGGCCAGGGCGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR TCA 90 bp | CATCCCCAGTGCGGAGCAACCAGTCTGTACCTCGGTCTAATGACCCTGGAAAATTACGCTGGTGTGACTTaGGGTGCGACGACTTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: HPQCGATSLYLGLMTLENYAGVT*GATTCS Trigger: ACTACAAGTCGTCGCACCTCAAGTCACACCAGCGTA...ATTTTCCAGGGTCATTAGACCGAGGTACAGACTGGTTGCTCCGCACTGGGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR CCA 90 bp | GGGGATCATAGGGGACCTCATCGGGTTAGGAAAGGCCTTTCAGCCTCATATTTAGCATGCTTGGTCAGGTaGTCGCTCCGAGAGAACTGC | + |
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Preference number: 4 (lower is better) Translates to: GDHRGPHRVRKGLSASYLACLVR*SLRENC Trigger: GCAGTTCTCTCGGAGCGACCACCTGACCAAGCATGC...TAAATATGAGGCTGAAAGGCCTTTCCTAACCCGATGAGGTCCCCTATGATCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR TCA 90 bp | CCTGCAGGCTGTTTGGAAGAAACCGTTCATTTCAGAAGATGTTTGTGTTGCAGGCCATGGAAGGAGCACTaGTGTCGCTTGGATGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: PAGCLEETVHFRRCLCCRPWKEH*CRLDAG Trigger: GCCCGCATCCAAGCGACATCAGTGCTCCTTCCATGG...CCTGCAACACAAACATCTTCTGAAATGAACGGTTTCTTCCAAACAGCCTGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR GCA 90 bp | CATCCCCAGTGCGGAGCAACCAGTCTGTACCTCGGTCTAATGACCCTGGAAAATTGTAGTAGGCCTTGTTaGAGCCATGGAAGGAGCACT | + |
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Preference number: 4 (lower is better) Translates to: HPQCGATSLYLGLMTLENCSRPC*SHGRST Trigger: AGTGCTCCTTCCATGGCTGCAACAAGGCCTACTACA...ATTTTCCAGGGTCATTAGACCGAGGTACAGACTGGTTGCTCCGCACTGGGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR CCA 90 bp | GTGAGACACCAGAGTCATTTGGAACTGGGAGATCCTCCAGCATCTCAGAATTCATCCGAGAGAACTGCTTaGGACACAGCGGGCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VRHQSHLELGDPPASQNSSERTA*DTAGRR Trigger: TCTCCTGCCCGCTGTGTCCCAAGCAGTTCTCTCGGA...TGAATTCTGAGATGCTGGAGGATCTCCCAGTTCCAAATGACTCTGGTGTCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR TCA 90 bp | GGTAGGGTGAGAACATGGGAACACAATCACAAAGGAACACCATTTAAAAGTCAAGTCATCCGGCTCCTCTaGGGCCTCAGGCGCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: GRVRTWEHNHKGTPFKSQVIRLL*GLRRIQ Trigger: CTGGATGCGCCTGAGGCCTCAGAGGAGCCGGATGAC...TTGACTTTTAAATGGTGTTCCTTTGTGATTGTGTTCCCATGTTCTCACCCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR CCA 90 bp | TCCCCCTCACCCACCAATTCACCTGTAACAGAAACAACAATGTACAGACCTTCAGTGAAGCTGGTCTCCTaGCCAGAAGAGGAGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SPSPTNSPVTETTMYRPSVKLVS*PEEELE Trigger: CTCCAGCTCCTCTTCTGGCCAGGAGACCAGCTTCAC...TGAAGGTCTGTACATTGTTGTTTCTGTTACAGGTGAATTGGTGGGTGAGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR CCA 90 bp | CAGGCTGTTTGGAAGAAACCGTTCATTTCAGAAGATGTTTGTGTTGCAGGACTTTCCTCGAAGAAGGCCTaGGTAGGCTCAGAGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: QAVWKKPFISEDVCVAGLSSKKA*VGSEPP Trigger: TGGGGGCTCTGAGCCTACCCAGGCCTTCTTCGAGGA...AAGTCCTGCAACACAAACATCTTCTGAAATGAACGGTTTCTTCCAAACAGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR CCA 90 bp | GGTAGGGTGAGAACATGGGAACACAATCACAAAGGAACACCATTTAAAAGTCAACCCGTGTGGGTACGCTaGTGTGACTTGAGGTGCGAC | + |
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Preference number: 4 (lower is better) Translates to: GRVRTWEHNHKGTPFKSQPVWVR*CDLRCD Trigger: GTCGCACCTCAAGTCACACCAGCGTACCCACACGGG...TTGACTTTTAAATGGTGTTCCTTTGTGATTGTGTTCCCATGTTCTCACCCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR CCA 90 bp | TCCCCCTCACCCACCAATTCACCTGTAACAGAAACAACAATGTACAGACCTTCAGTCGGGATGGTAAGTTaGATGGCGACGAGCATGCTT | + |
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Preference number: 4 (lower is better) Translates to: SPSPTNSPVTETTMYRPSVGMVS*MATSML Trigger: AAGCATGCTCGTCGCCATCCAACTTACCATCCCGAC...TGAAGGTCTGTACATTGTTGTTTCTGTTACAGGTGAATTGGTGGGTGAGGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR TCA 90 bp | GGTAGGGTGAGAACATGGGAACACAATCACAAAGGAACACCATTTAAAAGTCAAGTGGGTACGCTGGTGTaGCTTGAGGTGCGACGACTT | + |
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Preference number: 4 (lower is better) Translates to: GRVRTWEHNHKGTPFKSQVGTLV*LEVRRL Trigger: AAGTCGTCGCACCTCAAGTCACACCAGCGTACCCAC...TTGACTTTTAAATGGTGTTCCTTTGTGATTGTGTTCCCATGTTCTCACCCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| 3UTR CAA 72 bp | GGCTGTTTGGAAGAAACCGTTCATTTCAGAAGATGTTaGTGTTGCAGGACTTCCTGCTATCTTCTGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: GCLEETVHFRRC*CCRTSCYLLAP Trigger: GGGAGCCAGAAGATAGCAGGAAGTCCTGCAACACAAACATCTTCTGAAATGAACGGTTTCTTCCAAACAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS GCA 90 bp | CCCCGCCGACTCCCGAGACACTGCACCCACCTCGGAGACAGCCGCTaGGCTCGCGCCTTCGGGGTCCGTTGCGCGCCGGTGCAGCACGGC | + |
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Preference number: 5 (lower is better) Translates to: PRRLPRHCTHLGDSR*ARAFGVRCAPVQHG Trigger: GCCGTGCTGCACCGGCGCGCAACGGACCCCGAAGGCGCGAGCGCAGCGGCTGTCTCCGAGGTGGGTGCAGTGTCTCGGGAGTCGGCGGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS GCA 90 bp | ACCCACCTCGGAGACAGCCGCTGCGCTCGCGCCTTCGGGGTCCGTTaGGCGCCGGTGCAGCACGGCGCGGGTGGACATAGACACCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: THLGDSRCARAFGVR*APVQHGAGGHRHQA Trigger: TGCCTGGTGTCTATGTCCACCCGCGCCGTGCTGCACCGGCGCGCAACGGACCCCGAAGGCGCGAGCGCAGCGGCTGTCTCCGAGGTGGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS CCA 90 bp | CCTGGCCAGAAGAGGAGCTGGAGTCGGAACCAGAGCTTTCCACCATaGCTGGGGGTGGTGGCTCAGGGCGGGGAGTGCGACGACGACCTC | + |
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Preference number: 5 (lower is better) Translates to: PGQKRSWSRNQSFPP*LGVVAQGGECDDDL Trigger: GAGGTCGTCGTCGCACTCCCCGCCCTGAGCCACCACCCCCAGCCATGGTGGAAAGCTCTGGTTCCGACTCCAGCTCCTCTTCTGGCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS TCA 90 bp | CCCTGGGGGCCCCTCGGGCACTTCTCCGCTGTCATCCGGCTCCTCTaGGGCCTCAGGCGCATCCAGGATAGCAGAATCACTGCAGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: PWGPLGHFSAVIRLL*GLRRIQDSRITAGA Trigger: AGCTCCTGCAGTGATTCTGCTATCCTGGATGCGCCTGAGGCCTCAGAGGAGCCGGATGACAGCGGAGAAGTGCCCGAGGGGCCCCCAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS CCA 90 bp | GCCAGAAGAGGAGCTGGAGTCGGAACCAGAGCTTTCCACCATGGCTaGGGGTGGTGGCTCAGGGCGGGGAGTGCGACGACGACCTCGGTA | + |
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Preference number: 5 (lower is better) Translates to: ARRGAGVGTRAFHHG*GWWLRAGSATTTSV Trigger: TACCGAGGTCGTCGTCGCACTCCCCGCCCTGAGCCACCACCCCCAGCCATGGTGGAAAGCTCTGGTTCCGACTCCAGCTCCTCTTCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR CAA 90 bp | GGGGATCATAGGGGACCTCATCGGGTTAGGAAAGGCCTTTCAGCCTCATATTTACTCCGAGAGAACTGCTaGGGACACAGCGGGCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: GDHRGPHRVRKGLSASYLLRENC*GHSGQE Trigger: CTCCTGCCCGCTGTGTCCCAAGCAGTTCTCTCGGAG...TAAATATGAGGCTGAAAGGCCTTTCCTAACCCGATGAGGTCCCCTATGATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS-3UTR CAA 90 bp | CATTTGGAACTGGGAGATCCTCCAGCATCTCAGAATTCAGTTTTACATCTCTGGGAACGCGTAAACTTCTaGTCGCAGTCGAGCCAATCA | + |
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Preference number: 5 (lower is better) Translates to: HLELGDPPASQNSVLHLWERVNF*SQSSQS Trigger: TGATTGGCTCGACTGCGACAAGAAGTTTACGCGTTC...CCAGAGATGTAAAACTGAATTCTGAGATGCTGGAGGATCTCCCAGTTCCAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS GCA 72 bp | GCTGCGCTCGCGCCTTCGGGGTCCGTTGCGCGCCGGTaGAGCACGGCGCGGGTGGACATAGACACCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: AALAPSGSVARR*STARVDIDTRH Trigger: GTGCCTGGTGTCTATGTCCACCCGCGCCGTGCTGCACCGGCGCGCAACGGACCCCGAAGGCGCGAGCGCAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS GCA 72 bp | CTCCCGAGACACTGCACCCACCTCGGAGACAGCCGCTaGGCTCGCGCCTTCGGGGTCCGTTGCGCGCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: LPRHCTHLGDSR*ARAFGVRCAPV Trigger: CACCGGCGCGCAACGGACCCCGAAGGCGCGAGCGCAGCGGCTGTCTCCGAGGTGGGTGCAGTGTCTCGGGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS CCA 72 bp | CAGCTTAAATCAGCCAAAGCGCTCGCAGCCAGCAGGTaGGGCGCGCCATCGCCTTCTCCGGGGCTCGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: QLKSAKALAASR*GAPSPSPGLGV Trigger: CACCCCGAGCCCCGGAGAAGGCGATGGCGCGCCCCACCTGCTGGCTGCGAGCGCTTTGGCTGATTTAAGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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| CDS TCA 72 bp | CCCCTCGGGCACTTCTCCGCTGTCATCCGGCTCCTCTaGGGCCTCAGGCGCATCCAGGATAGCAGAATCACT | + |
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Preference number: 6 (lower is better) Translates to: PLGHFSAVIRLL*GLRRIQDSRIT Trigger: AGTGATTCTGCTATCCTGGATGCGCCTGAGGCCTCAGAGGAGCCGGATGACAGCGGAGAAGTGCCCGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101589.5 |
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