Pregenerated sensors for KLF13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052040Ensembl transcript IDs: ENSMUST00000063694.10, ENSMUST00000183817.2, ENSMUST00000185175.2
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTCCCGACCAGCAGCAGGCCACCCACCCCTGCCCTGACCCACACTaGAGACTGGGTGCGGTTTGGGTGCTCTCAAGCAGGGCAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: CPDQQQATHPCPDPH*RLGAVWVLSSRAGR Trigger: TCTGCCTGCCCTGCTTGAGAGCACCCAAACCGCACCCAGTCTGCAGTGTGGGTCAGGGCAGGGGTGGGTGGCCTGCTGCTGGTCGGGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | GCCACCCACCCCTGCCCTGACCCACACTGCAGACTGGGTGCGGTTTaGGTGCTCTCAAGCAGGGCAGGCAGAAGCAGGACAGAAGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: ATHPCPDPHCRLGAV*VLSSRAGRSRTEEW Trigger: CCACTCTTCTGTCCTGCTTCTGCCTGCCCTGCTTGAGAGCACCCAAACCGCACCCAGTCTGCAGTGTGGGTCAGGGCAGGGGTGGGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | GTCTCTGGGTTTCCCCTGTGCTGCACCCCCACACTGTGTGAGGGTTaGGGCGGAGGCAGAATGGCCACAACCAAGGCACACTGGGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: VSGFPLCCTPTLCEG*GGGRMATTKAHWAQ Trigger: CTGGGCCCAGTGTGCCTTGGTTGTGGCCATTCTGCCTCCGCCCCAACCCTCACACAGTGTGGGGGTGCAGCACAGGGGAAACCCAGAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | TCCCAGGTGCCTTCGTGTAGGACAGGCAGGGCCCAGCCGCCTCCATaGGTGGTTGGCAGCCATGATGTGCCAATCCAGGCAGGGTTTGCA | + |
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Preference number: 1 (lower is better) Translates to: SQVPSCRTGRAQPPP*VVGSHDVPIQAGFA Trigger: TGCAAACCCTGCCTGGATTGGCACATCATGGCTGCCAACCACCCATGGAGGCGGCTGGGCCCTGCCTGTCCTACACGAAGGCACCTGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | AGGTGCCTTCGTGTAGGACAGGCAGGGCCCAGCCGCCTCCATGGGTaGTTGGCAGCCATGATGTGCCAATCCAGGCAGGGTTTGCATCTG | + |
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Preference number: 1 (lower is better) Translates to: RCLRVGQAGPSRLHG*LAAMMCQSRQGLHL Trigger: CAGATGCAAACCCTGCCTGGATTGGCACATCATGGCTGCCAACCACCCATGGAGGCGGCTGGGCCCTGCCTGTCCTACACGAAGGCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | CCTCCTGCTGTGACTCTATGGGGAGGTAGGCCACAAGGAGACACCTaGCTCCTCCCAAGGAGAGACCGTGGCTGGTCTCTGGGGCACACT | + |
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Preference number: 1 (lower is better) Translates to: PPAVTLWGGRPQGDT*LLPRRDRGWSLGHT Trigger: AGTGTGCCCCAGAGACCAGCCACGGTCTCTCCTTGGGAGGAGCCAGGTGTCTCCTTGTGGCCTACCTCCCCATAGAGTCACAGCAGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR GCA 90 bp | CAGGCAGGGCCCAGCCGCCTCCATGGGTGGTTGGCAGCCATGATGTaGCAATCCAGGCAGGGTTTGCATCTGGCCTCCATTTTCCTAAGG | + |
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Preference number: 1 (lower is better) Translates to: QAGPSRLHGWLAAMM*QSRQGLHLASIFLR Trigger: CCTTAGGAAAATGGAGGCCAGATGCAAACCCTGCCTGGATTGGCACATCATGGCTGCCAACCACCCATGGAGGCGGCTGGGCCCTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | CAAAGAAACCAATCAAACCTCCCTTCCCTGGTGGACTGGGACCGCTaGCCACCAAGAGGAAGGGCCTCTCCCTCAGCAGTGCTCAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: QRNQSNLPSLVDWDR*PPRGRASPSAVLRP Trigger: AGGCCTGAGCACTGCTGAGGGAGAGGCCCTTCCTCTTGGTGGCCAGCGGTCCCAGTCCACCAGGGAAGGGAGGTTTGATTGGTTTCTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR GCA 90 bp | GCTCCTCCCAAGGAGAGACCGTGGCTGGTCTCTGGGGCACACTGCTaGCTCTGGCTTCAGAACTGTGGATGTAGGTGCACCAAAGGACTT | + |
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Preference number: 1 (lower is better) Translates to: APPKERPWLVSGAHC*LWLQNCGCRCTKGL Trigger: AAGTCCTTTGGTGCACCTACATCCACAGTTCTGAAGCCAGAGGCAGCAGTGTGCCCCAGAGACCAGCCACGGTCTCTCCTTGGGAGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR GCA 90 bp | CGGCACCCCTGCTTGGTGGAGATCCCAGCTGAAGCCTCTAGGAAATaGTGTGACCCTGTGCAGTCCATCGTAGCACCTGCTTCTGGCAAG | + |
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Preference number: 1 (lower is better) Translates to: RHPCLVEIPAEASRK*CDPVQSIVAPASGK Trigger: CTTGCCAGAAGCAGGTGCTACGATGGACTGCACAGGGTCACAGCATTTCCTAGAGGCTTCAGCTGGGATCTCCACCAAGCAGGGGTGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | GCGCACACACACACACACACACACACACACACACACATCCAGTCCTaGGGCTTTGTGTTCCTGGGCCCCAGAGTTCGTGGGAGAAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: AHTHTHTHTHTHIQS*GFVFLGPRVRGRRG Trigger: TCCCCTTCTCCCACGAACTCTGGGGCCCAGGAACACAAAGCCCCAGGACTGGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | GGGAGCCACATGACAACAGCTGGAAACTGTAGACTTGGCTGGGCATaGTCTCTGGGTTTCCCCTGTGCTGCACCCCCACACTGTGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: GSHMTTAGNCRLGWA*SLGFPCAAPPHCVR Trigger: CCTCACACAGTGTGGGGGTGCAGCACAGGGGAAACCCAGAGACCATGCCCAGCCAAGTCTACAGTTTCCAGCTGTTGTCATGTGGCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR GCA 90 bp | GGGATTCCCAGTCACCAAGGAGGGACAGGAGCTCTGACCCCACAATaGATAGTGGCTCAGCAGGGAGCCTTATGGTACTGTCCATGGGGT | + |
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Preference number: 1 (lower is better) Translates to: GIPSHQGGTGALTPQ*IVAQQGALWYCPWG Trigger: ACCCCATGGACAGTACCATAAGGCTCCCTGCTGAGCCACTATGCATTGTGGGGTCAGAGCTCCTGTCCCTCCTTGGTGACTGGGAATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | TGTATGGGTCAAAGAAACCAATCAAACCTCCCTTCCCTGGTGGACTaGGACCGCTGGCCACCAAGAGGAAGGGCCTCTCCCTCAGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: CMGQRNQSNLPSLVD*DRWPPRGRASPSAV Trigger: CACTGCTGAGGGAGAGGCCCTTCCTCTTGGTGGCCAGCGGTCCCAGTCCACCAGGGAAGGGAGGTTTGATTGGTTTCTTTGACCCATACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR TCA 90 bp | ATAGGCAAGTGCTCCCATGGTCTGTCATGGCTTACCACATCCCTGTaGGGTGGCCGGTCTCTTAGCCAGGCCAAAGGGCAGAGAACCACA | + |
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Preference number: 1 (lower is better) Translates to: IGKCSHGLSWLTTSL*GGRSLSQAKGQRTT Trigger: TGTGGTTCTCTGCCCTTTGGCCTGGCTAAGAGACCGGCCACCTCACAGGGATGTGGTAAGCCATGACAGACCATGGGAGCACTTGCCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR TCA 90 bp | GGGTTGCCAGGGTGCAGAATTTTGCACCCAGAGGCTGCACTCTGGTaGATTGTCCACCTGCCCCAATGCTGGACTCAGAACAAGGTTGCC | + |
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Preference number: 1 (lower is better) Translates to: GLPGCRILHPEAALW*IVHLPQCWTQNKVA Trigger: GGCAACCTTGTTCTGAGTCCAGCATTGGGGCAGGTGGACAATTCACCAGAGTGCAGCCTCTGGGTGCAAAATTCTGCACCCTGGCAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR GCA 90 bp | AGTCAAGGTCCTGGCCACGTACCCCACTCTCTTCCCCAGGTGAAATaGAAGCAGAGCTGTTACCAGCTTTACACTGGACCAGGGCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: SQGPGHVPHSLPQVK*KQSCYQLYTGPGQG Trigger: TCCCTGCCCTGGTCCAGTGTAAAGCTGGTAACAGCTCTGCTTGCATTTCACCTGGGGAAGAGAGTGGGGTACGTGGCCAGGACCTTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR GCA 90 bp | CTGGTGAATTGTCCACCTGCCCCAATGCTGGACTCAGAACAAGGTTaGCATGGTGTGGGCTGGAGGTGGGGAGCCTTTGCATCTCATGTC | + |
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Preference number: 1 (lower is better) Translates to: LVNCPPAPMLDSEQG*HGVGWRWGAFASHV Trigger: GACATGAGATGCAAAGGCTCCCCACCTCCAGCCCACACCATGGCAACCTTGTTCTGAGTCCAGCATTGGGGCAGGTGGACAATTCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | AACTCTGTATGGGTCAAAGAAACCAATCAAACCTCCCTTCCCTGGTaGACTGGGACCGCTGGCCACCAAGAGGAAGGGCCTCTCCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: NSVWVKETNQTSLPW*TGTAGHQEEGPLPQ Trigger: CTGAGGGAGAGGCCCTTCCTCTTGGTGGCCAGCGGTCCCAGTCCACCAGGGAAGGGAGGTTTGATTGGTTTCTTTGACCCATACAGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | TCCCCCAGAAGTTCCACCGATGGCTTTGGATGGGAAGCAGTCACCTaGGCCTGTCCAACAAAACCACAGCAGGGATTCCCAGTCACCAAG | + |
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Preference number: 1 (lower is better) Translates to: SPRSSTDGFGWEAVT*ACPTKPQQGFPVTK Trigger: CTTGGTGACTGGGAATCCCTGCTGTGGTTTTGTTGGACAGGCCCAGGTGACTGCTTCCCATCCAAAGCCATCGGTGGAACTTCTGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR TCA 90 bp | TCTTCAGTCAAGGTCCTGGCCACGTACCCCACTCTCTTCCCCAGGTaGAATGCAAGCAGAGCTGTTACCAGCTTTACACTGGACCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: SSVKVLATYPTLFPR*NASRAVTSFTLDQG Trigger: GCCCTGGTCCAGTGTAAAGCTGGTAACAGCTCTGCTTGCATTTCACCTGGGGAAGAGAGTGGGGTACGTGGCCAGGACCTTGACTGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR GCA 90 bp | GCAGAATTTTGCACCCAGAGGCTGCACTCTGGTGAATTGTCCACCTaGCCCAATGCTGGACTCAGAACAAGGTTGCCATGGTGTGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: AEFCTQRLHSGELST*PNAGLRTRLPWCGL Trigger: CAGCCCACACCATGGCAACCTTGTTCTGAGTCCAGCATTGGGGCAGGTGGACAATTCACCAGAGTGCAGCCTCTGGGTGCAAAATTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | ACTAACTCTGTATGGGTCAAAGAAACCAATCAAACCTCCCTTCCCTaGTGGACTGGGACCGCTGGCCACCAAGAGGAAGGGCCTCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: TNSVWVKETNQTSLP*WTGTAGHQEEGPLP Trigger: AGGGAGAGGCCCTTCCTCTTGGTGGCCAGCGGTCCCAGTCCACCAGGGAAGGGAGGTTTGATTGGTTTCTTTGACCCATACAGAGTTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR TCA 90 bp | CAAAGGAGCAACCAGAACATGGTCTTGCTGACGAGGCCCAGCACCTaGAGCCAATGTAGCCCAGGTCTAGGCTCCAGGAGAAATAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: QRSNQNMVLLTRPST*SQCSPGLGSRRNRA Trigger: TGCTCTATTTCTCCTGGAGCCTAGACCTGGGCTACATTGGCTTCAGGTGCTGGGCCTCGTCAGCAAGACCATGTTCTGGTTGCTCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | GAGGATTCTCCTAAGTCTAGAGTCTCAGTACTGAGACAGGCAACCTaGCCCACAGGCATTGGGCAAATGAGCACAGGCAGCCTACCCACA | + |
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Preference number: 1 (lower is better) Translates to: EDSPKSRVSVLRQAT*PTGIGQMSTGSLPT Trigger: TGTGGGTAGGCTGCCTGTGCTCATTTGCCCAATGCCTGTGGGCCAGGTTGCCTGTCTCAGTACTGAGACTCTAGACTTAGGAGAATCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | GTTTGGGTGCTCTCAAGCAGGGCAGGCAGAAGCAGGACAGAAGAGTaGGTAATGCAACAGTGTGGAACTGTGGGTCTGCTAAGTCTGTAC | + |
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Preference number: 1 (lower is better) Translates to: VWVLSSRAGRSRTEE*VMQQCGTVGLLSLY Trigger: GTACAGACTTAGCAGACCCACAGTTCCACACTGTTGCATTACCCACTCTTCTGTCCTGCTTCTGCCTGCCCTGCTTGAGAGCACCCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | GGCTGGGCTAGGCTAGAGTTCCAGAGCAAGTCCACTAACTCTGTATaGGTCAAAGAAACCAATCAAACCTCCCTTCCCTGGTGGACTGGG | + |
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Preference number: 1 (lower is better) Translates to: GWARLEFQSKSTNSV*VKETNQTSLPWWTG Trigger: CCCAGTCCACCAGGGAAGGGAGGTTTGATTGGTTTCTTTGACCCATACAGAGTTAGTGGACTTGCTCTGGAACTCTAGCCTAGCCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR TCA 90 bp | GGGAGAAGGGGAAGAATGCCTGAACCTCTGCAGGGTGGGAGGAGATaGTACTCCAAGTATCTGCAAAGGAGCAACCAGAACATGGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: GRRGRMPEPLQGGRR*YSKYLQRSNQNMVL Trigger: CAAGACCATGTTCTGGTTGCTCCTTTGCAGATACTTGGAGTATCATCTCCTCCCACCCTGCAGAGGTTCAGGCATTCTTCCCCTTCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR TCA 90 bp | CACAACCAAGGCACACTGGGCCCAGGAAGCCCATCTATGACCCTCTaGGTCACAAGGGCCAATTCTCCACATCAAAATGAAGAGAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: HNQGTLGPGSPSMTL*VTRANSPHQNEERS Trigger: AGACCTCTCTTCATTTTGATGTGGAGAATTGGCCCTTGTGACTCAGAGGGTCATAGATGGGCTTCCTGGGCCCAGTGTGCCTTGGTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR TCA 90 bp | AGAATGGCCACAACCAAGGCACACTGGGCCCAGGAAGCCCATCTATaGCCCTCTGAGTCACAAGGGCCAATTCTCCACATCAAAATGAAG | + |
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Preference number: 1 (lower is better) Translates to: RMATTKAHWAQEAHL*PSESQGPILHIKMK Trigger: CTTCATTTTGATGTGGAGAATTGGCCCTTGTGACTCAGAGGGTCATAGATGGGCTTCCTGGGCCCAGTGTGCCTTGGTTGTGGCCATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR TCA 90 bp | CATACTAGGGTAGACATTGTAAGTCAGGTCTGCCACTGGAGCAGATaGCCAGGCAGTGTCTTGAGTCACAAGGGACGTAGAACTAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: HTRVDIVSQVCHWSR*PGSVLSHKGRRTSY Trigger: GTAGCTAGTTCTACGTCCCTTGTGACTCAAGACACTGCCTGGTCATCTGCTCCAGTGGCAGACCTGACTTACAATGTCTACCCTAGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR GCA 90 bp | GTCTTCTGCAAAAACACCACATCACTGTCTCCAGCTGTCCTGTTCTaGCCCAATGTAATCCTAAACCTCACAGAAACTCCAGAGTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: VFCKNTTSLSPAVLF*PNVILNLTETPECK Trigger: TTTGCACTCTGGAGTTTCTGTGAGGTTTAGGATTACATTGGGGCAGAACAGGACAGCTGGAGACAGTGATGTGGTGTTTTTGCAGAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR TCA 90 bp | GCCAAAGGACCACACCCTGCCATTAAAGGAGAACCACTTTGGGAATaGAGACACGTTCATTTGCCAAAAATAGCCAACGCCTGCATATTT | + |
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Preference number: 1 (lower is better) Translates to: AKGPHPAIKGEPLWE*RHVHLPKIANACIF Trigger: AAATATGCAGGCGTTGGCTATTTTTGGCAAATGAACGTGTCTTCATTCCCAAAGTGGTTCTCCTTTAATGGCAGGGTGTGGTCCTTTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR CCA 90 bp | GGAAGACTGCATCTTCGAAGGCATCCCTTGTTTATTATGACAAGATaGGAACCTAATGAAAAGCCCCTGGAACTGAAGTTAGTGAGTCAT | + |
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Preference number: 1 (lower is better) Translates to: GRLHLRRHPLFIMTR*EPNEKPLELKLVSH Trigger: ATGACTCACTAACTTCAGTTCCAGGGGCTTTTCATTAGGTTCCCATCTTGTCATAATAAACAAGGGATGCCTTCGAAGATGCAGTCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR-3UTR CCA 90 bp | GGCATCGGAGCGGCTGTAGTCGCTGAGCGAGCCGGTCCTCGAGCCCCCGCCGCGCCGCTGCAGCATGCCTaGGTGGAAGTTGGCGTGGCG | + |
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Preference number: 2 (lower is better) Translates to: GIGAAVVAERAGPRAPAAPLQHA*VEVGVA Trigger: CGCCACGCCAACTTCCACCCAGGCATGCTGCAGCGG...CGCGGCGGGGGCTCGAGGACCGGCTCGCTCAGCGACTACAGCCGCTCCGATGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183817.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCCAGGCGCGGGTGCTCAGGGTGAGCTGGCCGGGCTGATGGTGGGGCTGCTGAAAACTGTTTTGCTGTaGACTTCTCAAGTTCGCTCA | + |
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Preference number: 2 (lower is better) Translates to: GPGAGAQGELAGLMVGLLKTVLL*TSQVRS Trigger: TGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTT...CAGCAGCCCCACCATCAGCCCGGCCAGCTCACCCTGAGCACCCGCGCCTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183817.2 |
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| 3UTR-3UTR CCA 90 bp | GGAACTCAGCATGAAGATCGCCACACCCCAAGCACCCAGGGCTCCCTTCTTCAGGGGGCTTTGTGTTCCTaGGCCCCAGAGTTCGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: GTQHEDRHTPSTQGSLLQGALCS*APEFVG Trigger: TCCCACGAACTCTGGGGCCCAGGAACACAAAGCCCC...CTGAAGAAGGGAGCCCTGGGTGCTTGGGGTGTGGCGATCTTCATGCTGAGTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR-3UTR TCA 90 bp | GGGACAGGAGCTCTGACCCCACAATGCATAGTGGCTCAGCAGGGAGCCTTATGGGAGGCTGCACTCTGGTaGATTGTCCACCTGCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: GTGALTPQCIVAQQGALWEAALW*IVHLPQ Trigger: TTGGGGCAGGTGGACAATTCACCAGAGTGCAGCCTC...CCATAAGGCTCCCTGCTGAGCCACTATGCATTGTGGGGTCAGAGCTCCTGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR-3UTR TCA 90 bp | GGGACAGGAGCTCTGACCCCACAATGCATAGTGGCTCAGCAGGGAGCCTTATGGCTTCCTCCCACCCCTTaGAGACATGAACTGAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: GTGALTPQCIVAQQGALWLPPTP*RHELKP Trigger: GGGCTTCAGTTCATGTCTTCAAGGGGTGGGAGGAAG...CCATAAGGCTCCCTGCTGAGCCACTATGCATTGTGGGGTCAGAGCTCCTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR-3UTR GCA 90 bp | GGGACAGGAGCTCTGACCCCACAATGCATAGTGGCTCAGCAGGGAGCCTTATGGCCTGGTTTCTATTCCTaGTGTCCCGACCAGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GTGALTPQCIVAQQGALWPGFYS*CPDQQQ Trigger: CTGCTGCTGGTCGGGACAGCAGGAATAGAAACCAGG...CCATAAGGCTCCCTGCTGAGCCACTATGCATTGTGGGGTCAGAGCTCCTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR-3UTR GCA 90 bp | GGGACAGGAGCTCTGACCCCACAATGCATAGTGGCTCAGCAGGGAGCCTTATGGTCTGGGGCACACTGCTaGCTCTGGCTTCAGAACTGT | + |
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Preference number: 2 (lower is better) Translates to: GTGALTPQCIVAQQGALWSGAHC*LWLQNC Trigger: ACAGTTCTGAAGCCAGAGGCAGCAGTGTGCCCCAGA...CCATAAGGCTCCCTGCTGAGCCACTATGCATTGTGGGGTCAGAGCTCCTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR-3UTR GCA 90 bp | GGGACAGGAGCTCTGACCCCACAATGCATAGTGGCTCAGCAGGGAGCCTTATGGGACTCAGAACAAGGTTaGCATGGTGTGGGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GTGALTPQCIVAQQGALWDSEQG*HGVGWR Trigger: CCTCCAGCCCACACCATGGCAACCTTGTTCTGAGTC...CCATAAGGCTCCCTGCTGAGCCACTATGCATTGTGGGGTCAGAGCTCCTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR-3UTR CCA 90 bp | GAGGATTCTCCTAAGTCTAGAGTCTCAGTACTGAGACAGGCAACCTGGCCCACAGGCGGTCCTGTCCAGTaGCCCAGGGCACGAGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: EDSPKSRVSVLRQATWPTGGPVQ*PRAREL Trigger: AAGCTCTCGTGCCCTGGGCCACTGGACAGGACCGCC...TGTGGGCCAGGTTGCCTGTCTCAGTACTGAGACTCTAGACTTAGGAGAATCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR-3UTR CCA 90 bp | TCTCACATGGACGGCACCCCTGCTTGGTGGAGATCCCAGCTGAAGCCTCTAGGAAGACTTGGCTGGGCATaGTCTCTGGGTTTCCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SHMDGTPAWWRSQLKPLGRLGWA*SLGFPC Trigger: ACAGGGGAAACCCAGAGACCATGCCCAGCCAAGTCT...TCCTAGAGGCTTCAGCTGGGATCTCCACCAAGCAGGGGTGCCGTCCATGTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR-3UTR CCA 90 bp | GAGGATTCTCCTAAGTCTAGAGTCTCAGTACTGAGACAGGCAACCTGGCCCACAGTGGACTGGGACCGCTaGCCACCAAGAGGAAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: EDSPKSRVSVLRQATWPTVDWDR*PPRGRA Trigger: GGCCCTTCCTCTTGGTGGCCAGCGGTCCCAGTCCAC...TGTGGGCCAGGTTGCCTGTCTCAGTACTGAGACTCTAGACTTAGGAGAATCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR-3UTR CCA 90 bp | CAAAGATCCTACTACAGACCCGGGTCTGGGAAGACTGCATCTTCGAAGGCATCCCCCTCACTGACCTCGTaGACCGCGTTCATCCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: QRSYYRPGSGKTASSKASPSLTS*TAFIPE Trigger: CTCAGGGATGAACGCGGTCCACGAGGTCAGTGAGGG...GGATGCCTTCGAAGATGCAGTCTTCCCAGACCCGGGTCTGTAGTAGGATCTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
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| 3UTR-3UTR CCA 90 bp | TCTCACATGGACGGCACCCCTGCTTGGTGGAGATCCCAGCTGAAGCCTCTAGGAAGGCAAGTGCTCCCATaGTCTGTCATGGCTTACCAC | + |
|
Preference number: 2 (lower is better) Translates to: SHMDGTPAWWRSQLKPLGRQVLP*SVMAYH Trigger: GTGGTAAGCCATGACAGACCATGGGAGCACTTGCCT...TCCTAGAGGCTTCAGCTGGGATCTCCACCAAGCAGGGGTGCCGTCCATGTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR TCA 90 bp | AGGAAAGACGGAACATGGCCTTTGGAAGCATGTTGGGAGCTAGGTTTCAACAAACACCCACCCCTGCCCTaGCCCACACTGCAGACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: RKDGTWPLEACWELGFNKHPPLP*PTLQTG Trigger: CCCAGTCTGCAGTGTGGGTCAGGGCAGGGGTGGGTG...TTTGTTGAAACCTAGCTCCCAACATGCTTCCAAAGGCCATGTTCCGTCTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR TCA 90 bp | GGGACAGGAGCTCTGACCCCACAATGCATAGTGGCTCAGCAGGGAGCCTTATGGCCATCTATGACCCTCTaGGTCACAAGGGCCAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: GTGALTPQCIVAQQGALWPSMTL*VTRANS Trigger: AGAATTGGCCCTTGTGACTCAGAGGGTCATAGATGG...CCATAAGGCTCCCTGCTGAGCCACTATGCATTGTGGGGTCAGAGCTCCTGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR TCA 90 bp | TGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCAAAGGGGTGAGCGGCTGTAGTCGCTaGGCGAGCCGGTCCTCGAGC | + |
|
Preference number: 2 (lower is better) Translates to: CFAVDFSSSLSFPITKGVSGCSR*ASRSSS Trigger: GCTCGAGGACCGGCTCGCTCAGCGACTACAGCCGCT...CACCCCTTTGGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183817.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCCACATTTCTCTTGGGTCCAGAGAATGTCACCTCCCCTCATCCATCCCGACAGGTGTGGGCTGGAGGTaGGGAGCCTTTGCATCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: CHISLGSRECHLPSSIPTGVGWR*GAFASH Trigger: ATGAGATGCAAAGGCTCCCCACCTCCAGCCCACACC...TGTCGGGATGGATGAGGGGAGGTGACATTCTCTGGACCCAAGAGAAATGTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGATCCTACTACAGACCCGGGTCTGGGAAGACTGCATCTTCGAAGGCATCCAGTCAGAAGGCCTCCTaGTGTGACTCTATGGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: QRSYYRPGSGKTASSKASSQKAS*CDSMGR Trigger: CCTCCCCATAGAGTCACAGCAGGAGGCCTTCTGACT...GGATGCCTTCGAAGATGCAGTCTTCCCAGACCCGGGTCTGTAGTAGGATCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR TCA 90 bp | CACATGACAACAGCTGGAAACTGTAGACTTGGCTGGGCATGGTCTCTGGGTTTCCAGGAAGCCCATCTATaGCCCTCTGAGTCACAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: HMTTAGNCRLGWAWSLGFQEAHL*PSESQG Trigger: CCCTTGTGACTCAGAGGGTCATAGATGGGCTTCCTG...GAAACCCAGAGACCATGCCCAGCCAAGTCTACAGTTTCCAGCTGTTGTCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGATCCTACTACAGACCCGGGTCTGGGAAGACTGCATCTTCGAAGGCATCCGCACACTGCTGCCTCTaGCTTCAGAACTGTGGATGT | + |
|
Preference number: 2 (lower is better) Translates to: QRSYYRPGSGKTASSKASAHCCL*LQNCGC Trigger: ACATCCACAGTTCTGAAGCCAGAGGCAGCAGTGTGC...GGATGCCTTCGAAGATGCAGTCTTCCCAGACCCGGGTCTGTAGTAGGATCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CCA 90 bp | CCATGTTTGGGTACGAAATTCTCTGGAATGTGTCCAGGACAAACCTTCGAAGACCCCAAGGAGAGACCGTaGCTGGTCTCTGGGGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: PCLGTKFSGMCPGQTFEDPKERP*LVSGAH Trigger: GTGTGCCCCAGAGACCAGCCACGGTCTCTCCTTGGG...GTCTTCGAAGGTTTGTCCTGGACACATTCCAGAGAATTTCGTACCCAAACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR TCA 90 bp | CCATGTTTGGGTACGAAATTCTCTGGAATGTGTCCAGGACAAACCTTCGAAGACGGTGGTTGGCAGCCATaGTGTGCCAATCCAGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PCLGTKFSGMCPGQTFEDGGWQP*CANPGR Trigger: CCTGCCTGGATTGGCACATCATGGCTGCCAACCACC...GTCTTCGAAGGTTTGTCCTGGACACATTCCAGAGAATTTCGTACCCAAACATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR TCA 90 bp | AGTATTATTCCTGGGCACCCTAGGGGTTCCTCAGTCAAACTGAAACCAGAAAATGCCACACTCACAGACTaGAGAGGCAGAGAGGGGGCG | + |
|
Preference number: 2 (lower is better) Translates to: SIIPGHPRGSSVKLKPENATLTD*RGREGA Trigger: CGCCCCCTCTCTGCCTCTTCAGTCTGTGAGTGTGGC...ATTTTCTGGTTTCAGTTTGACTGAGGAACCCCTAGGGTGCCCAGGAATAATACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR GCA 90 bp | TGCCCTGGCCCCATGCCAAAGGACCACACCCTGCCATTAAAGGAGAACCACTTTTTTTGGCAGCAACAATaGCACAGCCTAACTCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: CPGPMPKDHTLPLKENHFFWQQQ*HSLTQH Trigger: GTGCTGAGTTAGGCTGTGGCATTGTTGCTGCCAAAA...AAAGTGGTTCTCCTTTAATGGCAGGGTGTGGTCCTTTGGCATGGGGCCAGGGCA 52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CCA 90 bp | GTAGTAAGCTGGACTGTGCATCCATGTTTGGGTACGAAATTCTCTGGAATGTGTACCGTGGCTGGTCTCTaGGGCACACTGCTGCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: VVSWTVHPCLGTKFSGMCTVAGL*GTLLPL Trigger: CAGAGGCAGCAGTGTGCCCCAGAGACCAGCCACGGT...ACACATTCCAGAGAATTTCGTACCCAAACATGGATGCACAGTCCAGCTTACTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR TCA 90 bp | GGGACAGGAGCTCTGACCCCACAATGCATAGTGGCTCAGCAGGGAGCCTTATGGTTCTCCACATCAAAATaGAGAGAGGTCTCTGTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: GTGALTPQCIVAQQGALWFSTSK*REVSVR Trigger: TCTTACAGAGACCTCTCTTCATTTTGATGTGGAGAA...CCATAAGGCTCCCTGCTGAGCCACTATGCATTGTGGGGTCAGAGCTCCTGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CCA 90 bp | GTAGTAAGCTGGACTGTGCATCCATGTTTGGGTACGAAATTCTCTGGAATGTGTTGCCATGGTGTGGGCTaGAGGTGGGGAGCCTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VVSWTVHPCLGTKFSGMCCHGVG*RWGAFA Trigger: TGCAAAGGCTCCCCACCTCCAGCCCACACCATGGCA...ACACATTCCAGAGAATTTCGTACCCAAACATGGATGCACAGTCCAGCTTACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR GCA 90 bp | GAGGATTCTCCTAAGTCTAGAGTCTCAGTACTGAGACAGGCAACCTGGCCCACAAGGTCCAGTACAATGTaGCCAGGGTACTATTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: EDSPKSRVSVLRQATWPTRSSTM*PGYYFP Trigger: TGGGAAATAGTACCCTGGGCACATTGTACTGGACCT...TGTGGGCCAGGTTGCCTGTCTCAGTACTGAGACTCTAGACTTAGGAGAATCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR GCA 90 bp | AGGAAAGACGGAACATGGCCTTTGGAAGCATGTTGGGAGCTAGGTTTCAACAAAAGGGAACTGGGAAGCTaGTGGAAATGGCCTTGGACC | + |
|
Preference number: 2 (lower is better) Translates to: RKDGTWPLEACWELGFNKRELGS*WKWPWT Trigger: GGTCCAAGGCCATTTCCAGCAGCTTCCCAGTTCCCT...TTTGTTGAAACCTAGCTCCCAACATGCTTCCAAAGGCCATGTTCCGTCTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGATCCTACTACAGACCCGGGTCTGGGAAGACTGCATCTTCGAAGGCATCCTTTCCTAAGGATTTCTaGAAGCAGGTAGGTAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: QRSYYRPGSGKTASSKASFPKDF*KQVGRQ Trigger: CTGCCTACCTACCTGCTTCCAGAAATCCTTAGGAAA...GGATGCCTTCGAAGATGCAGTCTTCCCAGACCCGGGTCTGTAGTAGGATCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CCA 90 bp | CCCTTCCATCTATCAGATGGAACAGCCCTGGGTCATTCAGAGGAAAAATTAAATGGGGCGGAGGCAGAATaGCCACAACCAAGGCACACT | + |
|
Preference number: 2 (lower is better) Translates to: PFHLSDGTALGHSEEKLNGAEAE*PQPRHT Trigger: AGTGTGCCTTGGTTGTGGCCATTCTGCCTCCGCCCC...ATTTAATTTTTCCTCTGAATGACCCAGGGCTGTTCCATCTGATAGATGGAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CCA 90 bp | CCCTTCCATCTATCAGATGGAACAGCCCTGGGTCATTCAGAGGAAAAATTAAATAGGAGAGACCGTGGCTaGTCTCTGGGGCACACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PFHLSDGTALGHSEEKLNRRDRG*SLGHTA Trigger: AGCAGTGTGCCCCAGAGACCAGCCACGGTCTCTCCT...ATTTAATTTTTCCTCTGAATGACCCAGGGCTGTTCCATCTGATAGATGGAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGATCCTACTACAGACCCGGGTCTGGGAAGACTGCATCTTCGAAGGCATCCAAAACTGTTTTGCTGTaGACTTCTCAAGTTCGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: QRSYYRPGSGKTASSKASKTVLL*TSQVRS Trigger: TGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTT...GGATGCCTTCGAAGATGCAGTCTTCCCAGACCCGGGTCTGTAGTAGGATCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CCA 90 bp | TGCCACATTTCTCTTGGGTCCAGAGAATGTCACCTCCCCTCATCCATCCCGACAAAACAACATCAATTTTaGGGAGAAGCAGGTCCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: CHISLGSRECHLPSSIPTKQHQF*GEAGPV Trigger: TACTGGACCTGCTTCTCCCCAAAATTGATGTTGTTT...TGTCGGGATGGATGAGGGGAGGTGACATTCTCTGGACCCAAGAGAAATGTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CCA 90 bp | CCATCAAGAGAGAACCGAAGGCCCTCTTTGGAAAGGGCTATTTTCTGTATGGCTGAAATAGAGCAGGCCTaGTTTCTATTCCTGCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: PSRENRRPSLERAIFCMAEIEQA*FLFLLS Trigger: GGACAGCAGGAATAGAAACCAGGCCTGCTCTATTTC...AGCCATACAGAAAATAGCCCTTTCCAAAGAGGGCCTTCGGTTCTCTCTTGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR GCA 90 bp | CCCTTCCATCTATCAGATGGAACAGCCCTGGGTCATTCAGAGGAAAAATTAAATCTGGAATACCTGCTGTaGTGCTCTGAGGCGGTAACT | + |
|
Preference number: 2 (lower is better) Translates to: PFHLSDGTALGHSEEKLNLEYLL*CSEAVT Trigger: AGTTACCGCCTCAGAGCAGCACAGCAGGTATTCCAG...ATTTAATTTTTCCTCTGAATGACCCAGGGCTGTTCCATCTGATAGATGGAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGTTTTAAGGCAACGTTACCCTTCCATCTATCAGATGGAACAGCCCTGGGTTCCAATAGCATCTCCTaGAATACCTGCTGTGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: FCFKATLPFHLSDGTALGSNSIS*NTCCAA Trigger: AGCAGCACAGCAGGTATTCCAGGAGATGCTATTGGA...ACCCAGGGCTGTTCCATCTGATAGATGGAAGGGTAACGTTGCCTTAAAACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CCA 90 bp | CCATGTTTGGGTACGAAATTCTCTGGAATGTGTCCAGGACAAACCTTCGAAGACAGCAGGACAGAAGAGTaGGTAATGCAACAGTGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: PCLGTKFSGMCPGQTFEDSRTEE*VMQQCG Trigger: TCCACACTGTTGCATTACCCACTCTTCTGTCCTGCT...GTCTTCGAAGGTTTGTCCTGGACACATTCCAGAGAATTTCGTACCCAAACATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CCA 90 bp | CCCTTCCATCTATCAGATGGAACAGCCCTGGGTCATTCAGAGGAAAAATTAAATGGTAATGCAACAGTGTaGAACTGTGGGTCTGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: PFHLSDGTALGHSEEKLNGNATV*NCGSAK Trigger: CTTAGCAGACCCACAGTTCCACACTGTTGCATTACC...ATTTAATTTTTCCTCTGAATGACCCAGGGCTGTTCCATCTGATAGATGGAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CCA 90 bp | CCATGTTTGGGTACGAAATTCTCTGGAATGTGTCCAGGACAAACCTTCGAAGACATTAAGTGCTCTCTTTaGAAACAGCCTATGCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: PCLGTKFSGMCPGQTFEDIKCSL*KQPMPT Trigger: AGTGGGCATAGGCTGTTTCCAAAGAGAGCACTTAAT...GTCTTCGAAGGTTTGTCCTGGACACATTCCAGAGAATTTCGTACCCAAACATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR GCA 90 bp | GTAGTAAGCTGGACTGTGCATCCATGTTTGGGTACGAAATTCTCTGGAATGTGTCCTGGCTCTTCCTCATaGCATCCTAATTTCAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: VVSWTVHPCLGTKFSGMCPGSSS*HPNFKT Trigger: TGTTTTGAAATTAGGATGGCATGAGGAAGAGCCAGG...ACACATTCCAGAGAATTTCGTACCCAAACATGGATGCACAGTCCAGCTTACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR GCA 90 bp | CCCTTCCATCTATCAGATGGAACAGCCCTGGGTCATTCAGAGGAAAAATTAAATGATACTCCAAGTATCTaGAAAGGAGCAACCAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: PFHLSDGTALGHSEEKLNDTPSI*KGATRT Trigger: TGTTCTGGTTGCTCCTTTGCAGATACTTGGAGTATC...ATTTAATTTTTCCTCTGAATGACCCAGGGCTGTTCCATCTGATAGATGGAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CCA 90 bp | CCATGTTTGGGTACGAAATTCTCTGGAATGTGTCCAGGACAAACCTTCGAAGACTGCACCAAAGGACTTTaGAATAAAATTCCTGAATCT | + |
|
Preference number: 2 (lower is better) Translates to: PCLGTKFSGMCPGQTFEDCTKGL*NKIPES Trigger: AGATTCAGGAATTTTATTCCAAAGTCCTTTGGTGCA...GTCTTCGAAGGTTTGTCCTGGACACATTCCAGAGAATTTCGTACCCAAACATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR TCA 72 bp | TGGTGGGGCTGCTGGCATCGGAGCGGCTGTAGTCGCTaGGCGAGCCGGTCCTCGAGCCCCCGCCGCGCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: WWGCWHRSGCSR*ASRSSSPRRAA Trigger: AGCGGCGCGGCGGGGGCTCGAGGACCGGCTCGCTCAGCGACTACAGCCGCTCCGATGCCAGCAGCCCCACCA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183817.2 |
||
| 3UTR GCA 72 bp | AGCCGGTCCTCGAGCCCCCGCCGCGCCGCTGCAGCATaGCTGGGTGGAAGTTGGCGTGGCGGCGTGCGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SRSSSPRRAAAA*LGGSWRGGVRA Trigger: AGCACGCACGCCGCCACGCCAACTTCCACCCAGGCATGCTGCAGCGGCGCGGCGGGGGCTCGAGGACCGGCT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183817.2 |
||
| 3UTR GCA 72 bp | CTGAGCGAGCCGGTCCTCGAGCCCCCGCCGCGCCGCTaGAGCATGCCTGGGTGGAAGTTGGCGTGGCGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: LSEPVLEPPPRR*SMPGWKLAWRR Trigger: ACGCCGCCACGCCAACTTCCACCCAGGCATGCTGCAGCGGCGCGGCGGGGGCTCGAGGACCGGCTCGCTCAG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183817.2 |
||
| 3UTR CCA 72 bp | CGTGTAGGACAGGCAGGGCCCAGCCGCCTCCATGGGTaGTTGGCAGCCATGATGTGCCAATCCAGGCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RVGQAGPSRLHG*LAAMMCQSRQG Trigger: ACCCTGCCTGGATTGGCACATCATGGCTGCCAACCACCCATGGAGGCGGCTGGGCCCTGCCTGTCCTACACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | CCTTCGTGTAGGACAGGCAGGGCCCAGCCGCCTCCATaGGTGGTTGGCAGCCATGATGTGCCAATCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PSCRTGRAQPPP*VVGSHDVPIQA Trigger: TGCCTGGATTGGCACATCATGGCTGCCAACCACCCATGGAGGCGGCTGGGCCCTGCCTGTCCTACACGAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | GAAGAGGCAGAGAGGGGGCGTGGCGGTCCTGTCCAGTaGCCCAGGGCACGAGAGCTTAGGAAGCCGGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: EEAERGRGGPVQ*PRARELRKPDK Trigger: TTTATCCGGCTTCCTAAGCTCTCGTGCCCTGGGCCACTGGACAGGACCGCCACGCCCCCTCTCTGCCTCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | CCCTGCCCTGACCCACACTGCAGACTGGGTGCGGTTTaGGTGCTCTCAAGCAGGGCAGGCAGAAGCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: PCPDPHCRLGAV*VLSSRAGRSRT Trigger: TGTCCTGCTTCTGCCTGCCCTGCTTGAGAGCACCCAAACCGCACCCAGTCTGCAGTGTGGGTCAGGGCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | GGAGACACCTGGCTCCTCCCAAGGAGAGACCGTGGCTaGTCTCTGGGGCACACTGCTGCCTCTGGCTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GDTWLLPRRDRG*SLGHTAASGFR Trigger: TCTGAAGCCAGAGGCAGCAGTGTGCCCCAGAGACCAGCCACGGTCTCTCCTTGGGAGGAGCCAGGTGTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR GCA 72 bp | GCCCTGACCCACACTGCAGACTGGGTGCGGTTTGGGTaGTCTCAAGCAGGGCAGGCAGAAGCAGGACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ALTHTADWVRFG*SQAGQAEAGQK Trigger: CTTCTGTCCTGCTTCTGCCTGCCCTGCTTGAGAGCACCCAAACCGCACCCAGTCTGCAGTGTGGGTCAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | TTTCCCCTGTGCTGCACCCCCACACTGTGTGAGGGTTaGGGCGGAGGCAGAATGGCCACAACCAAGGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: FPLCCTPTLCEG*GGGRMATTKAH Trigger: GTGTGCCTTGGTTGTGGCCATTCTGCCTCCGCCCCAACCCTCACACAGTGTGGGGGTGCAGCACAGGGGAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | ACAAGGAGACACCTGGCTCCTCCCAAGGAGAGACCGTaGCTGGTCTCTGGGGCACACTGCTGCCTCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TRRHLAPPKERP*LVSGAHCCLWL Trigger: AAGCCAGAGGCAGCAGTGTGCCCCAGAGACCAGCCACGGTCTCTCCTTGGGAGGAGCCAGGTGTCTCCTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | CAATCAAACCTCCCTTCCCTGGTGGACTGGGACCGCTaGCCACCAAGAGGAAGGGCCTCTCCCTCAGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QSNLPSLVDWDR*PPRGRASPSAV Trigger: CACTGCTGAGGGAGAGGCCCTTCCTCTTGGTGGCCAGCGGTCCCAGTCCACCAGGGAAGGGAGGTTTGATTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR TCA 72 bp | TCTCAAGTTCGCTCAGCTTTCCTATTACCAAAGGGGTaGGGAGGCGCGGTCCAGGCGCGGGTGCTCAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SQVRSAFLLPKG*GGAVQARVLRV Trigger: CACCCTGAGCACCCGCGCCTGGACCGCGCCTCCTCACCCCTTTGGTAATAGGAAAGCTGAGCGAACTTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183817.2 |
||
| 3UTR GCA 72 bp | CCCAAGGAGAGACCGTGGCTGGTCTCTGGGGCACACTaGTGCCTCTGGCTTCAGAACTGTGGATGTAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PKERPWLVSGAH*CLWLQNCGCRC Trigger: GCACCTACATCCACAGTTCTGAAGCCAGAGGCAGCAGTGTGCCCCAGAGACCAGCCACGGTCTCTCCTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | GTGACTCTATGGGGAGGTAGGCCACAAGGAGACACCTaGCTCCTCCCAAGGAGAGACCGTGGCTGGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VTLWGGRPQGDT*LLPRRDRGWSL Trigger: CAGAGACCAGCCACGGTCTCTCCTTGGGAGGAGCCAGGTGTCTCCTTGTGGCCTACCTCCCCATAGAGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | AGTGGCGGAGTCAGAAGGCCTCCTGCTGTGACTCTATaGGGAGGTAGGCCACAAGGAGACACCTGGCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SGGVRRPPAVTL*GGRPQGDTWLL Trigger: GAGGAGCCAGGTGTCTCCTTGTGGCCTACCTCCCCATAGAGTCACAGCAGGAGGCCTTCTGACTCCGCCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR TCA 72 bp | GTGCAGACAGTGGCGGAGTCAGAAGGCCTCCTGCTGTaGCTCTATGGGGAGGTAGGCCACAAGGAGACACCT | + |
|
Preference number: 3 (lower is better) Translates to: VQTVAESEGLLL*LYGEVGHKETP Trigger: AGGTGTCTCCTTGTGGCCTACCTCCCCATAGAGTCACAGCAGGAGGCCTTCTGACTCCGCCACTGTCTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR GCA 72 bp | AAGGAGAGACCGTGGCTGGTCTCTGGGGCACACTGCTaGCTCTGGCTTCAGAACTGTGGATGTAGGTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: KERPWLVSGAHC*LWLQNCGCRCT Trigger: GGTGCACCTACATCCACAGTTCTGAAGCCAGAGGCAGCAGTGTGCCCCAGAGACCAGCCACGGTCTCTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR GCA 72 bp | AGGTTGCCATGGTGTGGGCTGGAGGTGGGGAGCCTTTaGATCTCATGTCCTGTGAGTAAGGGGCATGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RLPWCGLEVGSL*ISCPVSKGHGR Trigger: CCTGCCATGCCCCTTACTCACAGGACATGAGATGCAAAGGCTCCCCACCTCCAGCCCACACCATGGCAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | CAAAGAAACCAATCAAACCTCCCTTCCCTGGTGGACTaGGACCGCTGGCCACCAAGAGGAAGGGCCTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QRNQSNLPSLVD*DRWPPRGRASP Trigger: GGGAGAGGCCCTTCCTCTTGGTGGCCAGCGGTCCCAGTCCACCAGGGAAGGGAGGTTTGATTGGTTTCTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | ATAGTGGCTCAGCAGGGAGCCTTATGGTACTGTCCATaGGGTCCCCACACTCGGTACCCAGGGCTTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: IVAQQGALWYCP*GPHTRYPGLLQ Trigger: CTGGAGAAGCCCTGGGTACCGAGTGTGGGGACCCCATGGACAGTACCATAAGGCTCCCTGCTGAGCCACTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR TCA 72 bp | ACGATGCCGTTGCCACCATCAGTCCTGTGGGATGTGTaGGCGCTGCCACACTCACAGACTGAAGAGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TMPLPPSVLWDV*ALPHSQTEEAE Trigger: CTCTGCCTCTTCAGTCTGTGAGTGTGGCAGCGCTCACACATCCCACAGGACTGATGGTGGCAACGGCATCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR TCA 72 bp | GGGCCCCAGAGTTCGTGGGAGAAGGGGAAGAATGCCTaGACCTCTGCAGGGTGGGAGGAGATGATACTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GPQSSWEKGKNA*TSAGWEEMILQ Trigger: TTGGAGTATCATCTCCTCCCACCCTGCAGAGGTTCAGGCATTCTTCCCCTTCTCCCACGAACTCTGGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | ACCTGCCCCAATGCTGGACTCAGAACAAGGTTGCCATaGTGTGGGCTGGAGGTGGGGAGCCTTTGCATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TCPNAGLRTRLP*CGLEVGSLCIS Trigger: TGAGATGCAAAGGCTCCCCACCTCCAGCCCACACCATGGCAACCTTGTTCTGAGTCCAGCATTGGGGCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | TGGGTCAAAGAAACCAATCAAACCTCCCTTCCCTGGTaGACTGGGACCGCTGGCCACCAAGAGGAAGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: WVKETNQTSLPW*TGTAGHQEEGP Trigger: AGGCCCTTCCTCTTGGTGGCCAGCGGTCCCAGTCCACCAGGGAAGGGAGGTTTGATTGGTTTCTTTGACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | GGGTTTTGGCAAAGGATCCCCCAGAAGTTCCACCGATaGCTTTGGATGGGAAGCAGTCACCTGGGCCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GFWQRIPQKFHR*LWMGSSHLGLS Trigger: GGACAGGCCCAGGTGACTGCTTCCCATCCAAAGCCATCGGTGGAACTTCTGGGGGATCCTTTGCCAAAACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR GCA 72 bp | TGCACCCAGAGGCTGCACTCTGGTGAATTGTCCACCTaGCCCAATGCTGGACTCAGAACAAGGTTGCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: CTQRLHSGELST*PNAGLRTRLPW Trigger: CCATGGCAACCTTGTTCTGAGTCCAGCATTGGGGCAGGTGGACAATTCACCAGAGTGCAGCCTCTGGGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR GCA 72 bp | GGGTCCCCACACTCGGTACCCAGGGCTTCTCCAGTGTaGAATGGGGGAACAGAAAGATCCTTCTACCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: GSPHSVPRASPV*NGGTERSFYPH Trigger: ATGTGGGTAGAAGGATCTTTCTGTTCCCCCATTGCACACTGGAGAAGCCCTGGGTACCGAGTGTGGGGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | ATGACAACAGCTGGAAACTGTAGACTTGGCTGGGCATaGTCTCTGGGTTTCCCCTGTGCTGCACCCCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: MTTAGNCRLGWA*SLGFPCAAPPH Trigger: GTGTGGGGGTGCAGCACAGGGGAAACCCAGAGACCATGCCCAGCCAAGTCTACAGTTTCCAGCTGTTGTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | AGCCACATGACAACAGCTGGAAACTGTAGACTTGGCTaGGCATGGTCTCTGGGTTTCCCCTGTGCTGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: SHMTTAGNCRLG*AWSLGFPCAAP Trigger: GGGTGCAGCACAGGGGAAACCCAGAGACCATGCCCAGCCAAGTCTACAGTTTCCAGCTGTTGTCATGTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | CTCAGTACTGAGACAGGCAACCTGGCCCACAGGCATTaGGCAAATGAGCACAGGCAGCCTACCCACAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSTETGNLAHRH*ANEHRQPTHSK Trigger: CTTACTGTGGGTAGGCTGCCTGTGCTCATTTGCCCAATGCCTGTGGGCCAGGTTGCCTGTCTCAGTACTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCCACATTTCTCTTGGGTCCAGAGAATGTCACCTCCCCTCATCCATCCCGACAGGACTCAGAACAAGGTaGCCATGGTGTGGGCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CHISLGSRECHLPSSIPTGLRTR*PWCGLE Trigger: CTCCAGCCCACACCATGGCAACCTTGTTCTGAGTCC...TGTCGGGATGGATGAGGGGAGGTGACATTCTCTGGACCCAAGAGAAATGTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR TCA 72 bp | GGGTGCAGAATTTTGCACCCAGAGGCTGCACTCTGGTaGATTGTCCACCTGCCCCAATGCTGGACTCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GCRILHPEAALW*IVHLPQCWTQN Trigger: GTTCTGAGTCCAGCATTGGGGCAGGTGGACAATTCACCAGAGTGCAGCCTCTGGGTGCAAAATTCTGCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR TCA 72 bp | AGGTCTGCCACTGGAGCAGATGACCAGGCAGTGTCTTaGGTCACAAGGGACGTAGAACTAGCTACTCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RSATGADDQAVS*VTRDVELATPG Trigger: CCCAGGAGTAGCTAGTTCTACGTCCCTTGTGACTCAAGACACTGCCTGGTCATCTGCTCCAGTGGCAGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR GCA 72 bp | AGTCACCAAGGAGGGACAGGAGCTCTGACCCCACAATaGATAGTGGCTCAGCAGGGAGCCTTATGGTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: SHQGGTGALTPQ*IVAQQGALWYC Trigger: ACAGTACCATAAGGCTCCCTGCTGAGCCACTATGCATTGTGGGGTCAGAGCTCCTGTCCCTCCTTGGTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | GGGTTTGCATCTGGCCTCCATTTTCCTAAGGATTTCTaGAAGCAGGTAGGTAGGCAGGCAGGCAGGCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GFASGLHFPKDF*KQVGRQAGRQA Trigger: TGCCTGCCTGCCTGCCTGCCTACCTACCTGCTTCCAGAAATCCTTAGGAAAATGGAGGCCAGATGCAAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | CCTAAGTCTAGAGTCTCAGTACTGAGACAGGCAACCTaGCCCACAGGCATTGGGCAAATGAGCACAGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PKSRVSVLRQAT*PTGIGQMSTGS Trigger: GCTGCCTGTGCTCATTTGCCCAATGCCTGTGGGCCAGGTTGCCTGTCTCAGTACTGAGACTCTAGACTTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | AGTTCCACCGATGGCTTTGGATGGGAAGCAGTCACCTaGGCCTGTCCAACAAAACCACAGCAGGGATTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSTDGFGWEAVT*ACPTKPQQGFP Trigger: TGGGAATCCCTGCTGTGGTTTTGTTGGACAGGCCCAGGTGACTGCTTCCCATCCAAAGCCATCGGTGGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | TGGCAAAGGATCCCCCAGAAGTTCCACCGATGGCTTTaGATGGGAAGCAGTCACCTGGGCCTGTCCAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: WQRIPQKFHRWL*MGSSHLGLSNK Trigger: TTTGTTGGACAGGCCCAGGTGACTGCTTCCCATCCAAAGCCATCGGTGGAACTTCTGGGGGATCCTTTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR GCA 72 bp | GAGTTCGTGGGAGAAGGGGAAGAATGCCTGAACCTCTaGAGGGTGGGAGGAGATGATACTCCAAGTATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EFVGEGEECLNL*RVGGDDTPSIC Trigger: GCAGATACTTGGAGTATCATCTCCTCCCACCCTGCAGAGGTTCAGGCATTCTTCCCCTTCTCCCACGAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR GCA 72 bp | CTATTGCTCAGGTTAGTCTCACATGGACGGCACCCCTaGTTGGTGGAGATCCCAGCTGAAGCCTCTAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LLLRLVSHGRHP*LVEIPAEASRK Trigger: TTTCCTAGAGGCTTCAGCTGGGATCTCCACCAAGCAGGGGTGCCGTCCATGTGAGACTAACCTGAGCAATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | AGAGGTCCTTCACAGTTCCATAGGCAAGTGCTCCCATaGTCTGTCATGGCTTACCACATCCCTGTGAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RGPSQFHRQVLP*SVMAYHIPVRW Trigger: CCACCTCACAGGGATGTGGTAAGCCATGACAGACCATGGGAGCACTTGCCTATGGAACTGTGAAGGACCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | AAAGGATCCCCCAGAAGTTCCACCGATGGCTTTGGATaGGAAGCAGTCACCTGGGCCTGTCCAACAAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: KGSPRSSTDGFG*EAVTWACPTKP Trigger: TGGTTTTGTTGGACAGGCCCAGGTGACTGCTTCCCATCCAAAGCCATCGGTGGAACTTCTGGGGGATCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCCACATTTCTCTTGGGTCCAGAGAATGTCACCTCCCCTCATCCATCCCGACAGGCAGAGAACCACAATaGAGTGGTAGGCAAGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CHISLGSRECHLPSSIPTGREPQ*SGRQER Trigger: CCTCTCTTGCCTACCACTCAATTGTGGTTCTCTGCC...TGTCGGGATGGATGAGGGGAGGTGACATTCTCTGGACCCAAGAGAAATGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR TCA 72 bp | TGGGAGAGGATTCTCCTAAGTCTAGAGTCTCAGTACTaGGACAGGCAACCTGGCCCACAGGCATTGGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: WERILLSLESQY*DRQPGPQALGK Trigger: TTTGCCCAATGCCTGTGGGCCAGGTTGCCTGTCTCAGTACTGAGACTCTAGACTTAGGAGAATCCTCTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR TCA 72 bp | GGAAGAATGCCTGAACCTCTGCAGGGTGGGAGGAGATaGTACTCCAAGTATCTGCAAAGGAGCAACCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GRMPEPLQGGRR*YSKYLQRSNQN Trigger: GTTCTGGTTGCTCCTTTGCAGATACTTGGAGTATCATCTCCTCCCACCCTGCAGAGGTTCAGGCATTCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTAAGCTGGACTGTGCATCCATGTTTGGGTACGAAATTCTCTGGAATGTGTCTGGAAACTGTAGACTaGGCTGGGCATGGTCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VVSWTVHPCLGTKFSGMCLETVD*AGHGLW Trigger: CCAGAGACCATGCCCAGCCAAGTCTACAGTTTCCAG...ACACATTCCAGAGAATTTCGTACCCAAACATGGATGCACAGTCCAGCTTACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CAA 90 bp | CCATCAAGAGAGAACCGAAGGCCCTCTTTGGAAAGGGCTATTTTCTGTATGGCTGGGAGGGACTACACTTaGGAACTCAGCATGAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: PSRENRRPSLERAIFCMAGRDYT*ELSMKI Trigger: GATCTTCATGCTGAGTTCCAAAGTGTAGTCCCTCCC...AGCCATACAGAAAATAGCCCTTTCCAAAGAGGGCCTTCGGTTCTCTCTTGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR TCA 72 bp | GGAACTGTGGGTCTGCTAAGTCTGTACCCAAGGTTCTaGGAAAGTCATTCCCACAATTTTCATCCGGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GTVGLLSLYPRF*ESHSHNFHPVS Trigger: GGACACCGGATGAAAATTGTGGGAATGACTTTCTCAGAACCTTGGGTACAGACTTAGCAGACCCACAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | GAGAGCTTAGGAAGCCGGATAAAACAACATCAATTTTaGGGAGAAGCAGGTCCAGTACAATGTGCCCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ESLGSRIKQHQF*GEAGPVQCAQG Trigger: ACCCTGGGCACATTGTACTGGACCTGCTTCTCCCCAAAATTGATGTTGTTTTATCCGGCTTCCTAAGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | GTCTTGAGTCACAAGGGACGTAGAACTAGCTACTCCTaGGAGAGGATTCTCCTAAGTCTAGAGTCTCAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: VLSHKGRRTSYS*ERILLSLESQY Trigger: GTACTGAGACTCTAGACTTAGGAGAATCCTCTCCCAGGAGTAGCTAGTTCTACGTCCCTTGTGACTCAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCCACATTTCTCTTGGGTCCAGAGAATGTCACCTCCCCTCATCCATCCCGACAGTGAAGAAAACTGTTTaGCTGTGGACTTCTCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: CHISLGSRECHLPSSIPTVKKTV*LWTSQV Trigger: AACTTGAGAAGTCCACAGCAAAACAGTTTTCTTCAC...TGTCGGGATGGATGAGGGGAGGTGACATTCTCTGGACCCAAGAGAAATGTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR TCA 72 bp | CCACACCCTGCCATTAAAGGAGAACCACTTTGGGAATaGAGACACGTTCATTTGCCAAAAATAGCCAACGCC | + |
|
Preference number: 3 (lower is better) Translates to: PHPAIKGEPLWE*RHVHLPKIANA Trigger: GGCGTTGGCTATTTTTGGCAAATGAACGTGTCTTCATTCCCAAAGTGGTTCTCCTTTAATGGCAGGGTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | CTGGACTGTGCATCCATGTTTGGGTACGAAATTCTCTaGAATGTGTCCAGGACAAACCTTCGAAGACTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LDCASMFGYEIL*NVSRTNLRRLR Trigger: TCTGAGTCTTCGAAGGTTTGTCCTGGACACATTCCAGAGAATTTCGTACCCAAACATGGATGCACAGTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CAA 90 bp | CCATCAAGAGAGAACCGAAGGCCCTCTTTGGAAAGGGCTATTTTCTGTATGGCTAAAACAACATCAATTTaGGGGAGAAGCAGGTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PSRENRRPSLERAIFCMAKTTSI*GRSRSS Trigger: ACTGGACCTGCTTCTCCCCAAAATTGATGTTGTTTT...AGCCATACAGAAAATAGCCCTTTCCAAAGAGGGCCTTCGGTTCTCTCTTGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR GCA 72 bp | AAAAACACCACATCACTGTCTCCAGCTGTCCTGTTCTaGCCCAATGTAATCCTAAACCTCACAGAAACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KNTTSLSPAVLF*PNVILNLTETP Trigger: TGGAGTTTCTGTGAGGTTTAGGATTACATTGGGGCAGAACAGGACAGCTGGAGACAGTGATGTGGTGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR GCA 72 bp | CACTGCTGCCTCTGGCTTCAGAACTGTGGATGTAGGTaGACCAAAGGACTTTGGAATAAAATTCCTGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: HCCLWLQNCGCR*TKGLWNKIPES Trigger: AGATTCAGGAATTTTATTCCAAAGTCCTTTGGTGCACCTACATCCACAGTTCTGAAGCCAGAGGCAGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR TCA 72 bp | GAAGACTGCATCTTCGAAGGCATCCCTTGTTTATTATaGCAAGATGGGAACCTAATGAAAAGCCCCTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: EDCIFEGIPCLL*QDGNLMKSPWN Trigger: GTTCCAGGGGCTTTTCATTAGGTTCCCATCTTGTCATAATAAACAAGGGATGCCTTCGAAGATGCAGTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR-3UTR CAA 90 bp | CAACATCAATTTTGGGGAGAAGCAGGTCCAGTACAATGTGCCCAGGGTACTATTCTGTATTTGTGCAATTaGTGGGTGGTGTTTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: QHQFWGEAGPVQCAQGTILYLCN*WVVFLF Trigger: AAACAAAAACACCACCCACAAATTGCACAAATACAG...AATAGTACCCTGGGCACATTGTACTGGACCTGCTTCTCCCCAAAATTGATGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CCA 72 bp | CATCTTCGAAGGCATCCCTTGTTTATTATGACAAGATaGGAACCTAATGAAAAGCCCCTGGAACTGAAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: HLRRHPLFIMTR*EPNEKPLELKL Trigger: TAACTTCAGTTCCAGGGGCTTTTCATTAGGTTCCCATCTTGTCATAATAAACAAGGGATGCCTTCGAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR GCA 90 bp | GCCGGTCCTCGAGCCCCCGCCGCGCCGCTGCAGCATGCCTGGGTGGAAGTTGGCGTGCGAACTTCTTGTTaGACTCCTGCCAGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGPRAPAAPLQHAWVEVGVRTSC*TPASCR Trigger: CCTGCAGCTGGCAGGAGTGCAACAAGAAGTTCGCAC...GCCAACTTCCACCCAGGCATGCTGCAGCGGCGCGGCGGGGGCTCGAGGACCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183817.2 |
||
| CDS-3UTR GCA 90 bp | CACTCACAGACTGAAGAGGCAGAGAGGGGGCGTGGCGGTCCTGTCCAGTGGCCCCGTGCGATAGTGCCGTaGCAGCTCGTCCGAGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSQTEEAERGRGGPVQWPRAIVP*QLVRAC Trigger: GCACGCTCGGACGAGCTGGCACGGCACTATCGCACG...GGGCCACTGGACAGGACCGCCACGCCCCCTCTCTGCCTCTTCAGTCTGTGAGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR GCA 90 bp | GTCTGTCATGGCTTACCACATCCCTGTGAGGTGGCCGGTCTCTTAGCCAGGCCAGCGGGCGCCGGCGCCTaGTGGTTGAGGTCCGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCHGLPHPCEVAGLLARPAGAGA*WLRSAR Trigger: CCTAGCGGACCTCAACCAGCAGGCGCCGGCGCCCGC...TGGCCTGGCTAAGAGACCGGCCACCTCACAGGGATGTGGTAAGCCATGACAGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR CCA 90 bp | GGCATCGGAGCGGCTGTAGTCGCTGAGCGAGCCGGTCCTCGAGCCCCCGCCGCGCAAAACAGGAGGCCATaGGAACCTGCTGCTGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GIGAAVVAERAGPRAPAAQNRRP*EPAAES Trigger: AGATTCAGCAGCAGGTTCCCATGGCCTCCTGTTTTG...CGCGGCGGGGGCTCGAGGACCGGCTCGCTCAGCGACTACAGCCGCTCCGATGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183817.2 |
||
| CDS-3UTR TCA 90 bp | GTCTGTCATGGCTTACCACATCCCTGTGAGGTGGCCGGTCTCTTAGCCAGGCCAAGCGGCTGTAGTCGCTaGGCGAGCCGGTCCTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCHGLPHPCEVAGLLARPSGCSR*ASRSSS Trigger: GCTCGAGGACCGGCTCGCTCAGCGACTACAGCCGCT...TGGCCTGGCTAAGAGACCGGCCACCTCACAGGGATGTGGTAAGCCATGACAGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR GCA 90 bp | GGCTTAGAGTCCTTTTATCCTTCCCGTGTGCAGACAGTGGCGGAGTCAGAAGGCCCCCCGCCGCGCCGCTaGAGCATGCCTGGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLESFYPSRVQTVAESEGPPPRR*SMPGWK Trigger: CTTCCACCCAGGCATGCTGCAGCGGCGCGGCGGGGG...GCCTTCTGACTCCGCCACTGTCTGCACACGGGAAGGATAAAAGGACTCTAAGCC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR CCA 90 bp | GTCTGTCATGGCTTACCACATCCCTGTGAGGTGGCCGGTCTCTTAGCCAGGCCACTGCGCGGCTGGACATaGACACGAGGCACTCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VCHGLPHPCEVAGLLARPLRGWT*TRGTRR Trigger: CCGCCGAGTGCCTCGTGTCCATGTCCAGCCGCGCAG...TGGCCTGGCTAAGAGACCGGCCACCTCACAGGGATGTGGTAAGCCATGACAGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR GCA 90 bp | GTCTGTCATGGCTTACCACATCCCTGTGAGGTGGCCGGTCTCTTAGCCAGGCCACGGCTCGTGCACGACTaGGCGGCTGGACATGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: VCHGLPHPCEVAGLLARPRLVHD*AAGHGH Trigger: GTGTCCATGTCCAGCCGCGCAGTCGTGCACGAGCCG...TGGCCTGGCTAAGAGACCGGCCACCTCACAGGGATGTGGTAAGCCATGACAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR CCA 90 bp | GAGGATTCTCCTAAGTCTAGAGTCTCAGTACTGAGACAGGCAACCTGGCCCACATGCCTGGGTGGAAGTTaGCGTGGCGGCGTGCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EDSPKSRVSVLRQATWPTCLGGS*RGGVRA Trigger: AGCACGCACGCCGCCACGCCAACTTCCACCCAGGCA...TGTGGGCCAGGTTGCCTGTCTCAGTACTGAGACTCTAGACTTAGGAGAATCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR CCA 90 bp | GAGGATTCTCCTAAGTCTAGAGTCTCAGTACTGAGACAGGCAACCTGGCCCACACCGCTGCAGCATGCCTaGGTGGAAGTTGGCGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EDSPKSRVSVLRQATWPTPLQHA*VEVGVA Trigger: CGCCACGCCAACTTCCACCCAGGCATGCTGCAGCGG...TGTGGGCCAGGTTGCCTGTCTCAGTACTGAGACTCTAGACTTAGGAGAATCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR CCA 90 bp | GCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCAAAGGGGTGAGGAGGCCGCTGCAGCATGCCTaGGTGGAAGTTGGCGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AVDFSSSLSFPITKGVRRPLQHA*VEVGVA Trigger: CGCCACGCCAACTTCCACCCAGGCATGCTGCAGCGG...CCTCCTCACCCCTTTGGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000185175.2 |
||
| CDS-3UTR CCA 90 bp | CAATTTTGGGGAGAAGCAGGTCCAGTACAATGTGCCCAGGGTACTATTTCCCAGGGGTGGAAGTTGGCGTaGCGGCGTGCGTGCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QFWGEAGPVQCAQGTISQGWKLA*RRACFV Trigger: GACGAAGCACGCACGCCGCCACGCCAACTTCCACCC...CTGGGAAATAGTACCCTGGGCACATTGTACTGGACCTGCTTCTCCCCAAAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR GCA 90 bp | GGTGAAGAAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTCCCCCGCCGCGCCGCTaGAGCATGCCTGGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GEENCFAVDFSSSLSFPIPPPRR*SMPGWK Trigger: CTTCCACCCAGGCATGCTGCAGCGGCGCGGCGGGGG...AATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTTCTTCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000185175.2 |
||
| 3UTR CAA 72 bp | TTGGCAAAGGATCCCCCAGAAGTTCCACCGATGGCTTaGGATGGGAAGCAGTCACCTGGGCCTGTCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LAKDPPEVPPMA*DGKQSPGPVQQ Trigger: TTGTTGGACAGGCCCAGGTGACTGCTTCCCATCCAAAGCCATCGGTGGAACTTCTGGGGGATCCTTTGCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR TCA 90 bp | AACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCAAAGGGCCGGCGCCTGCTGGTTaGGGTCCGCTAGGATCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: NCFAVDFSSSLSFPITKGPAPAG*GPLGSE Trigger: CTCGGATCCTAGCGGACCTCAACCAGCAGGCGCCGG...CCCTTTGGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR GCA 90 bp | GGTGAAGAAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTAGGGGGTCCTCGCCTTaGGCGCAGCGGCCCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GEENCFAVDFSSSLSFPIRGSSP*AQRPLL Trigger: GAGAAGGGGCCGCTGCGCGCAAGGCGAGGACCCCCT...AATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTTCTTCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR CCA 90 bp | GTAGTAAGCTGGACTGTGCATCCATGTTTGGGTACGAAATTCTCTGGAATGTGTGGCGCCGGCGCCTGCTaGTTGAGGTCCGCTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: VVSWTVHPCLGTKFSGMCGAGAC*LRSARI Trigger: GATCCTAGCGGACCTCAACCAGCAGGCGCCGGCGCC...ACACATTCCAGAGAATTTCGTACCCAAACATGGATGCACAGTCCAGCTTACTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| 3UTR CAA 72 bp | GCAGAATTTTGCACCCAGAGGCTGCACTCTGGTGAATaGTCCACCTGCCCCAATGCTGGACTCAGAACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AEFCTQRLHSGE*STCPNAGLRTR Trigger: CCTTGTTCTGAGTCCAGCATTGGGGCAGGTGGACAATTCACCAGAGTGCAGCCTCTGGGTGCAAAATTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR TCA 90 bp | AAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCAAAGGCCGACCCCTTTGTCTaGGGCCAGGCTCGCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTVLLWTSQVRSAFLLPKADPFV*GQARRS Trigger: GGAGCGGCGAGCCTGGCCTCAGACAAAGGGGTCGGC...CTTTGGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR TCA 90 bp | CAACATCAATTTTGGGGAGAAGCAGGTCCAGTACAATGTGCCCAGGGTACTATTGGTGGTCGCTCCGCATaGAGCGCTTCTCACAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QHQFWGEAGPVQCAQGTIGGRSA*SASHRW Trigger: CCATCTGTGAGAAGCGCTTCATGCGGAGCGACCACC...AATAGTACCCTGGGCACATTGTACTGGACCTGCTTCTCCCCAAAATTGATGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR TCA 90 bp | GTGAAGAAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTAAGCGGCTGTAGTCGCTaGGCGAGCCGGTCCTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKKTVLLWTSQVRSAFLLSGCSR*ASRSSS Trigger: GCTCGAGGACCGGCTCGCTCAGCGACTACAGCCGCT...TAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTTCTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000185175.2 |
||
| CDS-3UTR GCA 90 bp | GAAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCAAAGCGAGGCGCTGTCCTTaGCGTCGCGGCGCTCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ENCFAVDFSSSLSFPITKARRCP*RRGARQ Trigger: TTGACGAGCGCCGCGACGGCAAGGACAGCGCCTCGC...TTTGGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCAAAGGGGTGAGGAGTTCTTGTTGCACTCCTaGCAGCTGCAGGCGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CCGLLKFAQLSYYQRGEEFLLHS*QLQAKG Trigger: GCCTTTCGCCTGCAGCTGGCAGGAGTGCAACAAGAA...CTCCTCACCCCTTTGGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000183817.2 |
||
| CDS-3UTR GCA 90 bp | GGTGAAGAAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTCGTGCGATAGTGCCGTaGCAGCTCGTCCGAGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GEENCFAVDFSSSLSFPIRAIVP*QLVRAC Trigger: GCACGCTCGGACGAGCTGGCACGGCACTATCGCACG...AATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTTCTTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000183817.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTCCATCTATCAGATGGAACAGCCCTGGGTCATTCAGAGGAAAAATTAAATCGCGCCGCTGCAGCATaGCTGGGTGGAAGTTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PFHLSDGTALGHSEEKLNRAAAA*LGGSWR Trigger: ACGCCAACTTCCACCCAGGCATGCTGCAGCGGCGCG...ATTTAATTTTTCCTCTGAATGACCCAGGGCTGTTCCATCTGATAGATGGAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR CCA 90 bp | GGTGAAGAAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTTGCCTGGGTGGAAGTTaGCGTGGCGGCGTGCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GEENCFAVDFSSSLSFPICLGGS*RGGVRA Trigger: AGCACGCACGCCGCCACGCCAACTTCCACCCAGGCA...AATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTTCTTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000185175.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCAAAGGGGTGCACAGATGGGGCAGCTaGACTTCTTCTCGCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CFAVDFSSSLSFPITKGVHRWGS*TSSRPC Trigger: ACACGGGCGAGAAGAAGTTCAGCTGCCCCATCTGTG...CACCCCTTTGGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000183817.2 |
||
| CDS-3UTR GCA 90 bp | AAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCAAAGCGCGCCGCTGCAGCATaGCTGGGTGGAAGTTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KTVLLWTSQVRSAFLLPKRAAAA*LGGSWR Trigger: ACGCCAACTTCCACCCAGGCATGCTGCAGCGGCGCG...CTTTGGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000185175.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCGCACGACTGCGCGGCTaGACATGGACACGAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: EENCFAVDFSSSLSFPITARLRG*TWTRGT Trigger: AGTGCCTCGTGTCCATGTCCAGCCGCGCAGTCGTGC...GGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR CCA 90 bp | AAGAAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCAGGGTGGAAGTTGGCGTaGCGGCGTGCGTGCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KKTVLLWTSQVRSAFLLPGWKLA*RRACFV Trigger: GACGAAGCACGCACGCCGCCACGCCAACTTCCACCC...TGGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000185175.2 |
||
| CDS-3UTR CCA 90 bp | GGTGAAGAAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTTGCAGCATGCCTGGGTaGAAGTTGGCGTGGCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GEENCFAVDFSSSLSFPICSMPG*KLAWRR Trigger: ACGCCGCCACGCCAACTTCCACCCAGGCATGCTGCA...AATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTTCTTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000185175.2 |
||
| 3UTR CAA 72 bp | TGGTTGGCAGCCATGATGTGCCAATCCAGGCAGGGTTaGCATCTGGCCTCCATTTTCCTAAGGATTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WLAAMMCQSRQG*HLASIFLRISG Trigger: TCCAGAAATCCTTAGGAAAATGGAGGCCAGATGCAAACCCTGCCTGGATTGGCACATCATGGCTGCCAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR GCA 90 bp | AAGAAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCACACTTGTGCTTCCTCTaGGGGGACTCGAGGTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: KKTVLLWTSQVRSAFLLPHLCFL*GDSRSA Trigger: CGCGGACCTCGAGTCCCCGCAGAGGAAGCACAAGTG...TGGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR CCA 90 bp | AAGAAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCATGCAGCATGCCTGGGTaGAAGTTGGCGTGGCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KKTVLLWTSQVRSAFLLPCSMPG*KLAWRR Trigger: ACGCCGCCACGCCAACTTCCACCCAGGCATGCTGCA...TGGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000185175.2 |
||
| CDS-3UTR TCA 90 bp | GAAGAAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCCACAGATGGGGCAGCTaGACTTCTTCTCGCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EENCFAVDFSSSLSFPITHRWGS*TSSRPC Trigger: ACACGGGCGAGAAGAAGTTCAGCTGCCCCATCTGTG...GGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000183817.2 |
||
| CDS-3UTR GCA 90 bp | AACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCAAAGGGTTCTTGTTGCACTCCTaGCAGCTGCAGGCGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NCFAVDFSSSLSFPITKGFLLHS*QLQAKG Trigger: GCCTTTCGCCTGCAGCTGGCAGGAGTGCAACAAGAA...CCCTTTGGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000183817.2 |
||
| CDS-3UTR GCA 90 bp | GTGAAGAAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTAGTGCGAACTTCTTGTTaGACTCCTGCCAGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKKTVLLWTSQVRSAFLLVRTSC*TPASCR Trigger: CCTGCAGCTGGCAGGAGTGCAACAAGAAGTTCGCAC...TAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTTCTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000183817.2 |
||
| 3UTR CAA 72 bp | CTTTCTCATTTGGGACATGAGCTAAACTCCAGACCCTaGATGGCTGAAGTCCAGAGTTCTGACACTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSHLGHELNSRP*MAEVQSSDTAV Trigger: TACAGCAGTGTCAGAACTCTGGACTTCAGCCATCAAGGGTCTGGAGTTTAGCTCATGTCCCAAATGAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR CAA 90 bp | GCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCAAAGGGGTGAGGAGGCAGGGGGTCCTCGCCTaGCGCGCAGCGGCCCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AVDFSSSLSFPITKGVRRQGVLA*RAAAPS Trigger: AGAAGGGGCCGCTGCGCGCAAGGCGAGGACCCCCTG...CCTCCTCACCCCTTTGGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR CAA 90 bp | GAGGATTCTCCTAAGTCTAGAGTCTCAGTACTGAGACAGGCAACCTGGCCCACAGCCTCGCCGACCCCTTaGTCTGAGGCCAGGCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: EDSPKSRVSVLRQATWPTASPTP*SEARLA Trigger: GGCGAGCCTGGCCTCAGACAAAGGGGTCGGCGAGGC...TGTGGGCCAGGTTGCCTGTCTCAGTACTGAGACTCTAGACTTAGGAGAATCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR CAA 90 bp | TTCTGTTTTAAGGCAACGTTACCCTTCCATCTATCAGATGGAACAGCCCTGGGTAGCGAGGCGCTGTCCTaGCCGTCGCGGCGCTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FCFKATLPFHLSDGTALGSEALS*PSRRSS Trigger: TGACGAGCGCCGCGACGGCAAGGACAGCGCCTCGCT...ACCCAGGGCTGTTCCATCTGATAGATGGAAGGGTAACGTTGCCTTAAAACAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR CAA 90 bp | TGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTACCAAAGGGGTGGCCGGCGCCTGCTGGTaGAGGTCCGCTAGGATCCGA | + |
|
Preference number: 5 (lower is better) Translates to: CFAVDFSSSLSFPITKGVAGACW*RSARIR Trigger: TCGGATCCTAGCGGACCTCAACCAGCAGGCGCCGGC...CACCCCTTTGGTAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS-3UTR CAA 90 bp | GGTGAAGAAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTATGCCTGGGTGGAAGTaGGCGTGGCGGCGTGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GEENCFAVDFSSSLSFPIMPGWK*AWRRAC Trigger: GCACGCACGCCGCCACGCCAACTTCCACCCAGGCAT...AATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTTCTTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000185175.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAGAAAACTGTTTTGCTGTGGACTTCTCAAGTTCGCTCAGCTTTCCTATTAATGCCTGGGTGGAAGTaGGCGTGGCGGCGTGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VKKTVLLWTSQVRSAFLLMPGWK*AWRRAC Trigger: GCACGCACGCCGCCACGCCAACTTCCACCCAGGCAT...TAATAGGAAAGCTGAGCGAACTTGAGAAGTCCACAGCAAAACAGTTTTCTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000185175.2 |
||
| CDS-3UTR CAA 90 bp | AGTATTATTCCTGGGCACCCTAGGGGTTCCTCAGTCAAACTGAAACCAGAAAATGAGCGTGCGAACTTCTaGTTGCACTCCTGCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SIIPGHPRGSSVKLKPENERANF*LHSCQL Trigger: CAGCTGGCAGGAGTGCAACAAGAAGTTCGCACGCTC...ATTTTCTGGTTTCAGTTTGACTGAGGAACCCCTAGGGTGCCCAGGAATAATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS GCA 72 bp | CCTTCTCTGCGTTCCGCGGGGGCGGGCGCCGGCGCCTaGTGGTTGAGGTCCGCTAGGATCCGAGCCACCACG | + |
|
Preference number: 6 (lower is better) Translates to: PSLRSAGAGAGA*WLRSARIRATT Trigger: CGTGGTGGCTCGGATCCTAGCGGACCTCAACCAGCAGGCGCCGGCGCCCGCCCCCGCGGAACGCAGAGAAGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS CCA 72 bp | CTCGAGCCCCCGCCGCGCCGCTGCAGCATGCCTGGGTaGAAGTTGGCGTGGCGGCGTGCGTGCTTCGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LEPPPRRCSMPG*KLAWRRACFVR Trigger: CCTGACGAAGCACGCACGCCGCCACGCCAACTTCCACCCAGGCATGCTGCAGCGGCGCGGCGGGGGCTCGAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000185175.2 |
||
| CDS CCA 72 bp | GGTCCTCGAGCCCCCGCCGCGCCGCTGCAGCATGCCTaGGTGGAAGTTGGCGTGGCGGCGTGCGTGCTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: GPRAPAAPLQHA*VEVGVAACVLR Trigger: ACGAAGCACGCACGCCGCCACGCCAACTTCCACCCAGGCATGCTGCAGCGGCGCGGCGGGGGCTCGAGGACC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063694.10 ENSMUST00000185175.2 |
||
| CDS GCA 72 bp | CCCTCGGGCCGGGGTTCAGGTCCTTCCCGCGGCTCGTaGACGACTGCGCGGCTGGACATGGACACGAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSGRGSGPSRGS*TTARLDMDTRH Trigger: GTGCCTCGTGTCCATGTCCAGCCGCGCAGTCGTGCACGAGCCGCGGGAAGGACCTGAACCCCGGCCCGAGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS GCA 72 bp | GGATCCGAGCCACCACGAAAAGCGAGGCGCTGTCCTTaGCGTCGCGGCGCTCGTCAACGCGGGGCAGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSEPPRKARRCP*RRGARQRGAVW Trigger: CCACACTGCCCCGCGTTGACGAGCGCCGCGACGGCAAGGACAGCGCCTCGCTTTTCGTGGTGGCTCGGATCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS CAA 72 bp | AGGATCCGAGCCACCACGAAAAGCGAGGCGCTGTCCTaGCCGTCGCGGCGCTCGTCAACGCGGGGCAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RIRATTKSEALS*PSRRSSTRGSV Trigger: CACACTGCCCCGCGTTGACGAGCGCCGCGACGGCAAGGACAGCGCCTCGCTTTTCGTGGTGGCTCGGATCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063694.10 |
||
| CDS TCA 72 bp | TCACCAGGCTCTTTGTTGGGGCAAGGATATATAAGGTaGCCTGTCGGAGAAGAGACCCTGGCAAAACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SPGSLLGQGYIR*PVGEETLAKQE Trigger: CTCCTGTTTTGCCAGGGTCTCTTCTCCGACAGGTCACCTTATATATCCTTGCCCCAACAAAGAGCCTGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183817.2 |
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