Pregenerated sensors for KLF12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072294Ensembl transcript IDs: ENSMUST00000097079.5, ENSMUST00000226774.2, ENSMUST00000228216.2
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCAGAGGACATAGCATGGAAAACAATGCCTGTCTCTTCAGGACCTaGGGCGCTGAACTCCCAGGCCAGCGTGAACGCAGACGGCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: GRGHSMENNACLFRT*GAELPGQRERRRLS Trigger: AGAGAGCCGTCTGCGTTCACGCTGGCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACAGGCATTGTTTTCCATGCTATGTCCTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| 3UTR GCA 90 bp | AAGAGACCCACAGGCGGAAGAGTTCATCGGCAGCTCTGCCTCCTGTaGCTCTCTAGTCACCAAGTAACTGTTTCCTACCAAGAAGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: KRPTGGRVHRQLCLL*LSSHQVTVSYQEVG Trigger: CCCCACTTCTTGGTAGGAAACAGTTACTTGGTGACTAGAGAGGCACAGGAGGCAGAGCTGCCGATGAACTCTTCCGCCTGTGGGTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR GCA 90 bp | AGTCCATGCCAGGGCGGAGCAGGACTAGTCTTTGAGAAACTGCTCTaGCCCTCTGCTGGAACTGATGCACAAAAACAGAATAGAAACAGA | + |
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Preference number: 1 (lower is better) Translates to: SPCQGGAGLVFEKLL*PSAGTDAQKQNRNR Trigger: TCTGTTTCTATTCTGTTTTTGTGCATCAGTTCCAGCAGAGGGGCAGAGCAGTTTCTCAAAGACTAGTCCTGCTCCGCCCTGGCATGGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR TCA 90 bp | TGTGTGCACACAGGTGCATGTGTTGCGGGTGACTGTCCAGATAAGTaGAAGGCAGTGTGGGAACAAGTAGACGTGGAATATGGAAGACAT | + |
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Preference number: 1 (lower is better) Translates to: CVHTGACVAGDCPDK*KAVWEQVDVEYGRH Trigger: ATGTCTTCCATATTCCACGTCTACTTGTTCCCACACTGCCTTTCACTTATCTGGACAGTCACCCGCAACACATGCACCTGTGTGCACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR GCA 90 bp | CTGTGTGTGTGCGAGGTGTTCCCAAACACACACACCCTTCCTAGCTaGAAGATGAACCACTTCAAACCTGAAACCAAAGCATGCTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: LCVCEVFPNTHTLPS*KMNHFKPETKACLG Trigger: TCCTAAGCATGCTTTGGTTTCAGGTTTGAAGTGGTTCATCTTGCAGCTAGGAAGGGTGTGTGTGTTTGGGAACACCTCGCACACACACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR GCA 90 bp | GCTTTTACATTTCAAGGAGACAATTGGTTCTCCCCACTGTGTGTGTaGGAGGTGTTCCCAAACACACACACCCTTCCTAGCTGCAAGATG | + |
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Preference number: 1 (lower is better) Translates to: AFTFQGDNWFSPLCV*EVFPNTHTLPSCKM Trigger: CATCTTGCAGCTAGGAAGGGTGTGTGTGTTTGGGAACACCTCGCACACACACAGTGGGGAGAACCAATTGTCTCCTTGAAATGTAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR CCA 90 bp | TTTCCATCTCTGCTTTGTCTCGTTTTCATGTTCAGTGACTTTGCCTaGGCAGCTCCACCTCTTACCGTGGTGCCAGTGTGTCTAAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: FPSLLCLVFMFSDFA*AAPPLTVVPVCLRK Trigger: CTTTCTTAGACACACTGGCACCACGGTAAGAGGTGGAGCTGCCCAGGCAAAGTCACTGAACATGAAAACGAGACAAAGCAGAGATGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR CCA 90 bp | GTGAAAGGCAGTGTGGGAACAAGTAGACGTGGAATATGGAAGACATaGCCAGCCAACCCTCTTTCCTTAGCTGAGCCAAGTCAATCTGAA | + |
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Preference number: 1 (lower is better) Translates to: VKGSVGTSRRGIWKT*PANPLSLAEPSQSE Trigger: TTCAGATTGACTTGGCTCAGCTAAGGAAAGAGGGTTGGCTGGCCATGTCTTCCATATTCCACGTCTACTTGTTCCCACACTGCCTTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR GCA 90 bp | TTGTTGATATTTGCTTGCCTGCTGGCTGCTGCATATACAGATGTGTaGACACAGGTGCATGTGTTGCGGGTGACTGTCCAGATAAGTGAA | + |
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Preference number: 1 (lower is better) Translates to: LLIFACLLAAAYTDV*TQVHVLRVTVQISE Trigger: TTCACTTATCTGGACAGTCACCCGCAACACATGCACCTGTGTGCACACATCTGTATATGCAGCAGCCAGCAGGCAAGCAAATATCAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR CCA 90 bp | ATTTTTGTGGGATATACAACCTCAGGAAAGGGAGAGAGAGAGAGCTaGCCGGTGGCCTACATTTACGTGATACACTTACAGGCAATGGTA | + |
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Preference number: 1 (lower is better) Translates to: IFVGYTTSGKGERES*PVAYIYVIHLQAMV Trigger: TACCATTGCCTGTAAGTGTATCACGTAAATGTAGGCCACCGGCCAGCTCTCTCTCTCTCCCTTTCCTGAGGTTGTATATCCCACAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR TCA 90 bp | TTTCTAGGCAGTCACTACAACAAAACAACGGCATGTGATTACAACTaGAGGCCTCCCCTCACCGGATCTATTCAATTGCAGCTTTGGTAC | + |
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Preference number: 1 (lower is better) Translates to: FLGSHYNKTTACDYN*RPPLTGSIQLQLWY Trigger: GTACCAAAGCTGCAATTGAATAGATCCGGTGAGGGGAGGCCTTCAGTTGTAATCACATGCCGTTGTTTTGTTGTAGTGACTGCCTAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR CCA 90 bp | AATGTACAAGCTACAAACATCTTTTCAATGGCAGAGGACATAGCATaGAAAACAATGCCTGTCTCTTCAGGACCTGAGGCGCTGAACTCC | + |
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Preference number: 1 (lower is better) Translates to: NVQATNIFSMAEDIA*KTMPVSSGPEALNS Trigger: GGAGTTCAGCGCCTCAGGTCCTGAAGAGACAGGCATTGTTTTCCATGCTATGTCCTCTGCCATTGAAAAGATGTTTGTAGCTTGTACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| 3UTR TCA 90 bp | AAATTAAGATGTCAGTCAGGAAGCTTCCCTGGCTTGTCAGATCAGTaGATTCTCCCTGTAAAACTGGCAAGATGCTTTCTCAGTGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: KLRCQSGSFPGLSDQ*ILPVKLARCFLSGE Trigger: TTCTCCACTGAGAAAGCATCTTGCCAGTTTTACAGGGAGAATTCACTGATCTGACAAGCCAGGGAAGCTTCCTGACTGACATCTTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR GCA 90 bp | AAGTCTCAGTTCTTGGGCCAGATCAGGGATGTGTTCATTTGTGCTTaGAACTCTTCTAAAAATATCGCTATGTCAAGAAGAGGGAAACGT | + |
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Preference number: 1 (lower is better) Translates to: KSQFLGQIRDVFICA*NSSKNIAMSRRGKR Trigger: ACGTTTCCCTCTTCTTGACATAGCGATATTTTTAGAAGAGTTGCAAGCACAAATGAACACATCCCTGATCTGGCCCAAGAACTGAGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR TCA 90 bp | GTTACTAATGCTGGCGTGCATCAGGAAACCTGGTTTTATTCTGGATaGTTACAGGCAATGAGAAGTAGGAAGTGCATACAGTACAGATTT | + |
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Preference number: 1 (lower is better) Translates to: VTNAGVHQETWFYSG*LQAMRSRKCIQYRF Trigger: AAATCTGTACTGTATGCACTTCCTACTTCTCATTGCCTGTAATCATCCAGAATAAAACCAGGTTTCCTGATGCACGCCAGCATTAGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR TCA 90 bp | GCGTGCATCAGGAAACCTGGTTTTATTCTGGATGATTACAGGCAATaGGAAGTAGGAAGTGCATACAGTACAGATTTAAAAATGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: ACIRKPGFILDDYRQ*EVGSAYSTDLKMFQ Trigger: CTGGAACATTTTTAAATCTGTACTGTATGCACTTCCTACTTCTCATTGCCTGTAATCATCCAGAATAAAACCAGGTTTCCTGATGCACGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR TCA 90 bp | GAATACTGCATCTTTATCCATATACACGTTATCATTCTAATGAGCTaGTCTCAAAGTGCAGAGTTCCATTTCCAGTCCAGACTCGAATGG | + |
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Preference number: 1 (lower is better) Translates to: EYCIFIHIHVIILMS*SQSAEFHFQSRLEW Trigger: CCATTCGAGTCTGGACTGGAAATGGAACTCTGCACTTTGAGATCAGCTCATTAGAATGATAACGTGTATATGGATAAAGATGCAGTATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGCTCACTTCCCCACATCTTCCTTATGCTGCTAGAGAGGTACGACTCTCTGGTGGTCTGTCCCTGTaGATGCCAATGTGGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: EELTSPHLPYAAREVRLSGGLSL*MPMWEH Trigger: GTGCTCCCACATTGGCATCCACAGGGACAGACCACC...AGAGAGTCGTACCTCTCTAGCAGCATAAGGAAGATGTGGGGAAGTGAGCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTTGTTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATTGTCTCTTCAGGACCTaGGGCGCTGAACTCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PLFLGNRVPPIAPSFLVHCLFRT*GAELPG Trigger: GCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACA...ATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAACAAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAAGATGCTTTCTCAGTGGAGAAAGGACTGGCTCCTACGAGAGCAGACAGTTCTTGTTCCTGCTCTaGTTTCAGGCACCGTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LARCFLSGERTGSYESRQFLFLL*FQAPWE Trigger: TTCCCACGGTGCCTGAAACCAGAGCAGGAACAAGAA...CTGTCTGCTCTCGTAGGAGCCAGTCCTTTCTCCACTGAGAAAGCATCTTGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR-3UTR CCA 90 bp | AACTGGCAAGATGCTTTCTCAGTGGAGAAAGGACTGGCTCCTACGAGAGCAGACAAGGGCAGGAGGAGATaGTGCCTAGGTGACAGAACA | + |
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Preference number: 2 (lower is better) Translates to: NWQDAFSVEKGLAPTRADKGRRR*CLGDRT Trigger: TGTTCTGTCACCTAGGCACCATCTCCTCCTGCCCTT...GTCTGCTCTCGTAGGAGCCAGTCCTTTCTCCACTGAGAAAGCATCTTGCCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATGCTGCTGGGCTAGGGTTAGGGTaGGGGTGGAAAGGAAGAATC | + |
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Preference number: 2 (lower is better) Translates to: FLGNRVPPIAPSFLVHAAGLGLG*GWKGRI Trigger: GATTCTTCCTTTCCACCCTCACCCTAACCCTAGCCC...AGCAGCATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGCTCACTTCCCCACATCTTCCTTATGCTGCTAGAGAGGTACGACTCTCTAGCAGGACTAGTCTTTaGGAAACTGCTCTGCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: EELTSPHLPYAAREVRLSSRTSL*ETALPL Trigger: GAGGGGCAGAGCAGTTTCTCAAAGACTAGTCCTGCT...AGAGAGTCGTACCTCTCTAGCAGCATAAGGAAGATGTGGGGAAGTGAGCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGCAAGATGCTTTCTCAGTGGAGAAAGGACTGGCTCCTACGAGAGCAGACAGCTTTCTAGTCCATGCTaGTTGCTGGTAACAGACTGG | + |
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Preference number: 2 (lower is better) Translates to: LARCFLSGERTGSYESRQLSSPC*LLVTDW Trigger: CCAGTCTGTTACCAGCAAGCAGCATGGACTAGAAAG...CTGTCTGCTCTCGTAGGAGCCAGTCCTTTCTCCACTGAGAAAGCATCTTGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCAAGATGCTTTCTCAGTGGAGAAAGGACTGGCTCCTACGAGAGCAGACAGTCTGAAGCTGGGACTTaGCCTGTAAATCATGCTACT | + |
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Preference number: 2 (lower is better) Translates to: LARCFLSGERTGSYESRQSEAGT*PVNHAT Trigger: AGTAGCATGATTTACAGGTCAAGTCCCAGCTTCAGA...CTGTCTGCTCTCGTAGGAGCCAGTCCTTTCTCCACTGAGAAAGCATCTTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR-3UTR CCA 90 bp | GGCATGAGGACAAGGTATGAGCGCTATCTAGCACAGAGGGCTACTTCTGTGTGCGCAGAGGACATAGCATaGAAAACAATGCCTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: GMRTRYERYLAQRATSVCAEDIA*KTMPVS Trigger: AGAGACAGGCATTGTTTTCCATGCTATGTCCTCTGC...GCACACAGAAGTAGCCCTCTGTGCTAGATAGCGCTCATACCTTGTCCTCATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| 3UTR-3UTR CCA 90 bp | GGCATGAGGACAAGGTATGAGCGCTATCTAGCACAGAGGGCTACTTCTGTGTGCTTGCTGGTAACAGACTaGGTGTGTGTTCTAGCTTAC | + |
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Preference number: 2 (lower is better) Translates to: GMRTRYERYLAQRATSVCLLVTD*VCVLAY Trigger: GTAAGCTAGAACACACACCCAGTCTGTTACCAGCAA...GCACACAGAAGTAGCCCTCTGTGCTAGATAGCGCTCATACCTTGTCCTCATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACAAGGTATGAGCGCTATCTAGCACAGAGGGCTACTTCTGTGTGCCTTTGTTTGCTGGTAACAGACTaGGTGTGTGTTCTAGCTTAC | + |
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Preference number: 2 (lower is better) Translates to: RTRYERYLAQRATSVCLCLLVTD*VCVLAY Trigger: GTAAGCTAGAACACACACCCAGTCTGTTACCAGCAA...ACAAAGGCACACAGAAGTAGCCCTCTGTGCTAGATAGCGCTCATACCTTGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAGTCCTCAGTGGAGTTATTGTAGGAAAGTCCTTCTATTCATTATTGCTTTTTGTCTCTTCAGGACCTaGGGCGCTGAACTCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: VSPQWSYCRKVLLFIIAFCLFRT*GAELPG Trigger: GCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACA...AAAAGCAATAATGAATAGAAGGACTTTCCTACAATAACTCCACTGAGGACTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAAGATGCTTTCTCAGTGGAGAAAGGACTGGCTCCTACGAGAGCAGACAGAACCTGGTTTTATTCTaGATGATTACAGGCAATGAG | + |
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Preference number: 2 (lower is better) Translates to: LARCFLSGERTGSYESRQNLVLF*MITGNE Trigger: CTCATTGCCTGTAATCATCCAGAATAAAACCAGGTT...CTGTCTGCTCTCGTAGGAGCCAGTCCTTTCTCCACTGAGAAAGCATCTTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGCTCACTTCCCCACATCTTCCTTATGCTGCTAGAGAGGTACGACTCTCTACCAACCTGTGTAGCTaGAGCTATTTATCAATAGAA | + |
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Preference number: 2 (lower is better) Translates to: EELTSPHLPYAAREVRLSTNLCS*SYLSIE Trigger: TTCTATTGATAAATAGCTTCAGCTACACAGGTTGGT...AGAGAGTCGTACCTCTCTAGCAGCATAAGGAAGATGTGGGGAAGTGAGCTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTACAAACATCTTTTCAATGGCAGAGGACATAGCATGGAAAACAATGCCTGTTTCTTGTTCCTGCTCTaGTTTCAGGCACCGTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: SYKHLFNGRGHSMENNACFLFLL*FQAPWE Trigger: TTCCCACGGTGCCTGAAACCAGAGCAGGAACAAGAA...ACAGGCATTGTTTTCCATGCTATGTCCTCTGCCATTGAAAAGATGTTTGTAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| 3UTR CAA 90 bp | CTGAAGCTATTTATCAATAGAACTACAGCCCTTGGAGGAGGGAAATaGCCTGATGAAGTTTTTATACCTGGCAGAAAATGTAGAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: LKLFINRTTALGGGK*PDEVFIPGRKCRAQ Trigger: CTGTGCTCTACATTTTCTGCCAGGTATAAAAACTTCATCAGGCAATTTCCCTCCTCCAAGGGCTGTAGTTCTATTGATAAATAGCTTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR-3UTR TCA 90 bp | AATAGAACTACAGCCCTTGGAGGAGGGAAATTGCCTGATGAAGTTTTTATACCTAGCAGCTTTCAGTGGTaGCAGACTATTTTGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: NRTTALGGGKLPDEVFIPSSFQW*QTILER Trigger: TCTTTCCAAAATAGTCTGTCACCACTGAAAGCTGCT...AGGTATAAAAACTTCATCAGGCAATTTCCCTCCTCCAAGGGCTGTAGTTCTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR-3UTR GCA 90 bp | AATAGAACTACAGCCCTTGGAGGAGGGAAATTGCCTGATGAAGTTTTTATACCTAGGGCTACTTCTGTGTaGCTTTGTTTTTGGGTAACA | + |
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Preference number: 2 (lower is better) Translates to: NRTTALGGGKLPDEVFIPRATSV*LCFWVT Trigger: TGTTACCCAAAAACAAAGGCACACAGAAGTAGCCCT...AGGTATAAAAACTTCATCAGGCAATTTCCCTCCTCCAAGGGCTGTAGTTCTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGCTTGCAACTCTTCTAAAAATATCGCTATGTCAAGAAGAGGGAAACGTTGTGATGATTACAGGCAATaGGAAGTAGGAAGTGCATAC | + |
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Preference number: 2 (lower is better) Translates to: CACNSSKNIAMSRRGKRCDDYRQ*EVGSAY Trigger: GTATGCACTTCCTACTTCTCATTGCCTGTAATCATC...ACAACGTTTCCCTCTTCTTGACATAGCGATATTTTTAGAAGAGTTGCAAGCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR CCA 72 bp | AGGCTTCCCATGGGGACACTCTTGCCAGGCTTCCCATaGGGACACTCTTGCCACGGACTCAGGCCCAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: RLPMGTLLPGFP*GHSCHGLRPKQ Trigger: CTGCTTGGGCCTGAGTCCGTGGCAAGAGTGTCCCCATGGGAAGCCTGGCAAGAGTGTCCCCATGGGAAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR CCA 72 bp | ACCCTTCTCCCAGAAGAAGCAGGTGGTCTGTCCCTGTaGATGCCAATGTGGGAGCACGGGGATTCTGGGACA | + |
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Preference number: 3 (lower is better) Translates to: TLLPEEAGGLSL*MPMWEHGDSGT Trigger: TGTCCCAGAATCCCCGTGCTCCCACATTGGCATCCACAGGGACAGACCACCTGCTTCTTCTGGGAGAAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR-3UTR CAA 90 bp | AACTGGCAAGATGCTTTCTCAGTGGAGAAAGGACTGGCTCCTACGAGAGCAGACCCCATGGGGACACTCTaGCCAGGCTTCCCATGGGGA | + |
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Preference number: 3 (lower is better) Translates to: NWQDAFSVEKGLAPTRADPMGTL*PGFPWG Trigger: TCCCCATGGGAAGCCTGGCAAGAGTGTCCCCATGGG...GTCTGCTCTCGTAGGAGCCAGTCCTTTCTCCACTGAGAAAGCATCTTGCCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR GCA 72 bp | GGGGGATCCTGCTTGTTTGCCACTGTCAGGGTTCTTTaGCCTGGCCAGTTACTAATGCTGGCGTGCATCAGG | + |
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Preference number: 3 (lower is better) Translates to: GGSCLFATVRVL*PGQLLMLACIR Trigger: CCTGATGCACGCCAGCATTAGTAACTGGCCAGGGCAAAGAACCCTGACAGTGGCAAACAAGCAGGATCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR TCA 72 bp | CATAGCATGGAAAACAATGCCTGTCTCTTCAGGACCTaGGGCGCTGAACTCCCAGGCCAGCGTGAACGCAGA | + |
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Preference number: 3 (lower is better) Translates to: HSMENNACLFRT*GAELPGQRERR Trigger: TCTGCGTTCACGCTGGCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACAGGCATTGTTTTCCATGCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| 3UTR CCA 72 bp | CTTACGACCTATCAATTAGGCTCTAGGGCCAGCGCCTaGGGGATCCTGCTTGTTTGCCACTGTCAGGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: LTTYQLGSRASA*GILLVCHCQGS Trigger: AGAACCCTGACAGTGGCAAACAAGCAGGATCCCCCAGGCGCTGGCCCTAGAGCCTAATTGATAGGTCGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR GCA 72 bp | TTTGCTTGCCTGCTGGCTGCTGCATATACAGATGTGTaGACACAGGTGCATGTGTTGCGGGTGACTGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: FACLLAAAYTDV*TQVHVLRVTVQ Trigger: CTGGACAGTCACCCGCAACACATGCACCTGTGTGCACACATCTGTATATGCAGCAGCCAGCAGGCAAGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR CCA 72 bp | CTGCTTTGTCTCGTTTTCATGTTCAGTGACTTTGCCTaGGCAGCTCCACCTCTTACCGTGGTGCCAGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: LLCLVFMFSDFA*AAPPLTVVPVC Trigger: ACACACTGGCACCACGGTAAGAGGTGGAGCTGCCCAGGCAAAGTCACTGAACATGAAAACGAGACAAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR CCA 72 bp | GGAGCACGGGGATTCTGGGACAGTTTAAAAAGTGAATaGCGTAGAGTCAGACTCTCGGCTCTCCAGGTTGGA | + |
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Preference number: 3 (lower is better) Translates to: GARGFWDSLKSE*RRVRLSALQVG Trigger: TCCAACCTGGAGAGCCGAGAGTCTGACTCTACGCCATTCACTTTTTAAACTGTCCCAGAATCCCCGTGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR CCA 72 bp | ATCCTGCTTGTTTGCCACTGTCAGGGTTCTTTGCCCTaGCCAGTTACTAATGCTGGCGTGCATCAGGAAACC | + |
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Preference number: 3 (lower is better) Translates to: ILLVCHCQGSLP*PVTNAGVHQET Trigger: GGTTTCCTGATGCACGCCAGCATTAGTAACTGGCCAGGGCAAAGAACCCTGACAGTGGCAAACAAGCAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| 3UTR TCA 72 bp | GTTGGTTCTTTTGGGGGATGGCATGAGGACAAGGTATaGGCGCTATCTAGCACAGAGGGCTACTTCTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VGSFGGWHEDKV*ALSSTEGYFCV Trigger: CACACAGAAGTAGCCCTCTGTGCTAGATAGCGCTCATACCTTGTCCTCATGCCATCCCCCAAAAGAACCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| 3UTR GCA 72 bp | TTTCAAGGAGACAATTGGTTCTCCCCACTGTGTGTGTaGGAGGTGTTCCCAAACACACACACCCTTCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: FQGDNWFSPLCV*EVFPNTHTLPS Trigger: GCTAGGAAGGGTGTGTGTGTTTGGGAACACCTCGCACACACACAGTGGGGAGAACCAATTGTCTCCTTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR CCA 72 bp | GTCCCTGTGGATGCCAATGTGGGAGCACGGGGATTCTaGGACAGTTTAAAAAGTGAATGGCGTAGAGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VPVDANVGARGF*DSLKSEWRRVR Trigger: TCTGACTCTACGCCATTCACTTTTTAAACTGTCCCAGAATCCCCGTGCTCCCACATTGGCATCCACAGGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR CCA 72 bp | AAAACTGGCAAGATGCTTTCTCAGTGGAGAAAGGACTaGCTCCTACGAGAGCAGACAGAACTAAGCCAACCG | + |
|
Preference number: 3 (lower is better) Translates to: KTGKMLSQWRKD*LLREQTELSQP Trigger: CGGTTGGCTTAGTTCTGTCTGCTCTCGTAGGAGCCAGTCCTTTCTCCACTGAGAAAGCATCTTGCCAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR CCA 72 bp | GGATATACAACCTCAGGAAAGGGAGAGAGAGAGAGCTaGCCGGTGGCCTACATTTACGTGATACACTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: GYTTSGKGERES*PVAYIYVIHLQ Trigger: CTGTAAGTGTATCACGTAAATGTAGGCCACCGGCCAGCTCTCTCTCTCTCCCTTTCCTGAGGTTGTATATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR CCA 72 bp | AGTGTGGGAACAAGTAGACGTGGAATATGGAAGACATaGCCAGCCAACCCTCTTTCCTTAGCTGAGCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SVGTSRRGIWKT*PANPLSLAEPS Trigger: ACTTGGCTCAGCTAAGGAAAGAGGGTTGGCTGGCCATGTCTTCCATATTCCACGTCTACTTGTTCCCACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR CCA 72 bp | GTGAAAGGCAGTGTGGGAACAAGTAGACGTGGAATATaGAAGACATGGCCAGCCAACCCTCTTTCCTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VKGSVGTSRRGI*KTWPANPLSLA Trigger: AGCTAAGGAAAGAGGGTTGGCTGGCCATGTCTTCCATATTCCACGTCTACTTGTTCCCACACTGCCTTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR TCA 72 bp | ATTTCCATCTCTGCTTTGTCTCGTTTTCATGTTCAGTaGCTTTGCCTGGGCAGCTCCACCTCTTACCGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ISISALSRFHVQ*LCLGSSTSYRG Trigger: ACCACGGTAAGAGGTGGAGCTGCCCAGGCAAAGTCACTGAACATGAAAACGAGACAAAGCAGAGATGGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR TCA 72 bp | ACAGGTGCATGTGTTGCGGGTGACTGTCCAGATAAGTaGAAGGCAGTGTGGGAACAAGTAGACGTGGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: TGACVAGDCPDK*KAVWEQVDVEY Trigger: ATATTCCACGTCTACTTGTTCCCACACTGCCTTTCACTTATCTGGACAGTCACCCGCAACACATGCACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR GCA 72 bp | TCTTCCTATTCAACTACGGAATACTCTGTCAGTCCATaGCAGGGCGGAGCAGGACTAGTCTTTGAGAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: SSYSTTEYSVSP*QGGAGLVFEKL Trigger: CAGTTTCTCAAAGACTAGTCCTGCTCCGCCCTGGCATGGACTGACAGAGTATTCCGTAGTTGAATAGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR CCA 72 bp | CCCTTGTCATCAGCTTTTACATTTCAAGGAGACAATTaGTTCTCCCCACTGTGTGTGTGCGAGGTGTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PLSSAFTFQGDN*FSPLCVCEVFP Trigger: TGGGAACACCTCGCACACACACAGTGGGGAGAACCAATTGTCTCCTTGAAATGTAAAAGCTGATGACAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR TCA 72 bp | AAATCCTGCTGGCTGGTGGGTACCAACCTGTGTAGCTaGAGCTATTTATCAATAGAACTACAGCCCTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: KSCWLVGTNLCS*SYLSIELQPLE Trigger: CTCCAAGGGCTGTAGTTCTATTGATAAATAGCTTCAGCTACACAGGTTGGTACCCACCAGCCAGCAGGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR GCA 72 bp | AGGGTTCTTTGCCCTGGCCAGTTACTAATGCTGGCGTaGATCAGGAAACCTGGTTTTATTCTGGATGATTAC | + |
|
Preference number: 3 (lower is better) Translates to: RVLCPGQLLMLA*IRKPGFILDDY Trigger: GTAATCATCCAGAATAAAACCAGGTTTCCTGATGCACGCCAGCATTAGTAACTGGCCAGGGCAAAGAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR CCA 72 bp | AATTCTCCCTGTAAAACTGGCAAGATGCTTTCTCAGTaGAGAAAGGACTGGCTCCTACGAGAGCAGACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: NSPCKTGKMLSQ*RKDWLLREQTE Trigger: TTCTGTCTGCTCTCGTAGGAGCCAGTCCTTTCTCCACTGAGAAAGCATCTTGCCAGTTTTACAGGGAGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGCTCACTTCCCCACATCTTCCTTATGCTGCTAGAGAGGTACGACTCTCTCAAAAAGCTCTTTACTaGAGAGATAGGATGGAACCT | + |
|
Preference number: 3 (lower is better) Translates to: EELTSPHLPYAAREVRLSQKALY*RDRMEP Trigger: AGGTTCCATCCTATCTCTCAAGTAAAGAGCTTTTTG...AGAGAGTCGTACCTCTCTAGCAGCATAAGGAAGATGTGGGGAAGTGAGCTCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR TCA 72 bp | GCTGGCGTGCATCAGGAAACCTGGTTTTATTCTGGATaGTTACAGGCAATGAGAAGTAGGAAGTGCATACAG | + |
|
Preference number: 3 (lower is better) Translates to: AGVHQETWFYSG*LQAMRSRKCIQ Trigger: CTGTATGCACTTCCTACTTCTCATTGCCTGTAATCATCCAGAATAAAACCAGGTTTCCTGATGCACGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR GCA 72 bp | TATACACGTTATCATTCTAATGAGCTGATCTCAAAGTaGAGAGTTCCATTTCCAGTCCAGACTCGAATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: YTRYHSNELISK*RVPFPVQTRMA Trigger: TGCCATTCGAGTCTGGACTGGAAATGGAACTCTGCACTTTGAGATCAGCTCATTAGAATGATAACGTGTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR-3UTR CAA 90 bp | AATAGAACTACAGCCCTTGGAGGAGGGAAATTGCCTGATGAAGTTTTTATACCTATTTCCATCTCTGCTTaGTCTCGTTTTCATGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: NRTTALGGGKLPDEVFIPISISA*SRFHVQ Trigger: CTGAACATGAAAACGAGACAAAGCAGAGATGGAAAT...AGGTATAAAAACTTCATCAGGCAATTTCCCTCCTCCAAGGGCTGTAGTTCTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR GCA 72 bp | AATGTCTTAACAACAAAAATCTCACCAAACCCAATTTaGCACAGAAAGCTGGGAAAACAGCAGCTTTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: NVLTTKISPNPI*HRKLGKQQLSV Trigger: CACTGAAAGCTGCTGTTTTCCCAGCTTTCTGTGGCAAATTGGGTTTGGTGAGATTTTTGTTGTTAAGACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR GCA 72 bp | TTCTTGGGCCAGATCAGGGATGTGTTCATTTGTGCTTaGAACTCTTCTAAAAATATCGCTATGTCAAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: FLGQIRDVFICA*NSSKNIAMSRR Trigger: TCTTCTTGACATAGCGATATTTTTAGAAGAGTTGCAAGCACAAATGAACACATCCCTGATCTGGCCCAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR TCA 72 bp | GTTGATTTGTGCAGTTTCCCAAATCAAGTGTGTCATTaGAATATATTGCAAAGGCCTTCACTGGAGACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VDLCSFPNQVCH*NILQRPSLETF Trigger: AAAGGTCTCCAGTGAAGGCCTTTGCAATATATTTCAATGACACACTTGATTTGGGAAACTGCACAAATCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR TCA 72 bp | ATCTTTATCCATATACACGTTATCATTCTAATGAGCTaGTCTCAAAGTGCAGAGTTCCATTTCCAGTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: IFIHIHVIILMS*SQSAEFHFQSR Trigger: TCTGGACTGGAAATGGAACTCTGCACTTTGAGATCAGCTCATTAGAATGATAACGTGTATATGGATAAAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR TCA 72 bp | AGGAAACCTGGTTTTATTCTGGATGATTACAGGCAATaGGAAGTAGGAAGTGCATACAGTACAGATTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RKPGFILDDYRQ*EVGSAYSTDLK Trigger: TTTTAAATCTGTACTGTATGCACTTCCTACTTCTCATTGCCTGTAATCATCCAGAATAAAACCAGGTTTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCTGTCTCTTCAGGACCTGAGGCGCTGAACTCCCAGGCCAGCGTGAACGCAGTGATCTACAGGCAGTaGGTCCTCTGGGGGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MPVSSGPEALNSQASVNAVIYRQ*VLWGLP Trigger: GGGGAGCCCCCAGAGGACTCACTGCCTGTAGATCAC...TGCGTTCACGCTGGCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACAGGCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAAACAATGCCTGTCTCTTCAGGACCTGAGGCGCTGAACTCCCAGGCCAGCGCCGCCCACGCCAGATaGAGAGGCAACAAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WKTMPVSSGPEALNSQASAAHAR*RGNKGS Trigger: GGACCCCTTGTTGCCTCTGCATCTGGCGTGGGCGGC...GCTGGCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACAGGCATTGTTTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | CGTGGGAATGGCGGTGCCCTTGACGTTAACACTGTAGAGGGAGCTCAGCCCTGCCCTCTTGTACTGCTCTaGCTATGGAAAGGGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGNGGALDVNTVEGAQPCPLVLL*LWKGPW Trigger: CCACGGCCCTTTCCATAGCCAGAGCAGTACAAGAGG...GCAGGGCTGAGCTCCCTCTACAGTGTTAACGTCAAGGGCACCGCCATTCCCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCTGTCTCTTCAGGACCTGAGGCGCTGAACTCCCAGGCCAGCGTGAACGCAGTAAGTTCATGGGACTaGAAGGTGGGACCGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: MPVSSGPEALNSQASVNAVSSWD*KVGPDG Trigger: TCCATCCGGTCCCACCTTCCAGTCCCATGAACTTAC...TGCGTTCACGCTGGCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACAGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCTGTCTCTTCAGGACCTGAGGCGCTGAACTCCCAGGCCAGCGTGAACGCACACTTTTACTCTGTCTaGGAGATAGGCCTCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MPVSSGPEALNSQASVNAHFYSV*EIGLGA Trigger: AGCCCCGAGGCCTATCTCCCAGACAGAGTAAAAGTG...TGCGTTCACGCTGGCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACAGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR TCA 90 bp | CGTGGGAATGGCGGTGCCCTTGACGTTAACACTGTAGAGGGAGCTCAGCCCTGCGTTCACATTTCCAGGTaGCCGTACAGCTGTGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RGNGGALDVNTVEGAQPCVHISR*PYSCVD Trigger: GTCTACACAGCTGTACGGTCACCTGGAAATGTGAAC...GCAGGGCTGAGCTCCCTCTACAGTGTTAACGTCAAGGGCACCGCCATTCCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAAACAATGCCTGTCTCTTCAGGACCTGAGGCGCTGAACTCCCAGGCCAGCGTACTGCTCTGGCTATaGAAAGGGCCGTGGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WKTMPVSSGPEALNSQASVLLWL*KGPWIQ Trigger: CTGGATCCACGGCCCTTTCCATAGCCAGAGCAGTAC...GCTGGCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACAGGCATTGTTTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATGCTGCTGCCGCCCACGCCAGATaGAGAGGCAACAAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLGNRVPPIAPSFLVHAAAAHAR*RGNKGS Trigger: GGACCCCTTGTTGCCTCTGCATCTGGCGTGGGCGGC...AGCAGCATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR GCA 90 bp | GGCATGAGGACAAGGTATGAGCGCTATCTAGCACAGAGGGCTACTTCTGTGTGCACCGGATGGATGATGTaGAAGAACTGCTGGCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GMRTRYERYLAQRATSVCTGWMM*KNCWPP Trigger: GGGCGGCCAGCAGTTCTTGCACATCATCCATCCGGT...GCACACAGAAGTAGCCCTCTGTGCTAGATAGCGCTCATACCTTGTCCTCATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| 3UTR CAA 72 bp | TGGGGGATCCTGCTTGTTTGCCACTGTCAGGGTTCTTaGCCCTGGCCAGTTACTAATGCTGGCGTGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: WGILLVCHCQGS*PWPVTNAGVHQ Trigger: CTGATGCACGCCAGCATTAGTAACTGGCCAGGGCAAAGAACCCTGACAGTGGCAAACAAGCAGGATCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATGCTGCTGTGATCTACAGGCAGTaGGTCCTCTGGGGGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLGNRVPPIAPSFLVHAAVIYRQ*VLWGLP Trigger: GGGGAGCCCCCAGAGGACTCACTGCCTGTAGATCAC...AGCAGCATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCTGTCTCTTCAGGACCTGAGGCGCTGAACTCCCAGGCCAGCGTGAACGCAGTAGTTGTGGACGTTTaGAGACCCTTGTTCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: MPVSSGPEALNSQASVNAVVVDV*RPLFRF Trigger: GAATCTGAACAAGGGTCTCCAAACGTCCACAACTAC...TGCGTTCACGCTGGCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR TCA 90 bp | AGGACAAGGTATGAGCGCTATCTAGCACAGAGGGCTACTTCTGTGTGCCTTTGTCACAGTCCGCGCACTTaGATGGCTTCACTCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RTRYERYLAQRATSVCLCHSPRT*MASLPC Trigger: ACACGGGAGTGAAGCCATTCAAGTGCGCGGACTGTG...ACAAAGGCACACAGAAGTAGCCCTCTGTGCTAGATAGCGCTCATACCTTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTGTTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATCAGTGCCAGGTGGTCTaGCCTCGAGAAGCTGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLFLGNRVPPIAPSFLVHQCQVV*PREAAV Trigger: GACCGCAGCTTCTCGAGGTCAGACCACCTGGCACTG...ATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAACAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAAACAATGCCTGTCTCTTCAGGACCTGAGGCGCTGAACTCCCAGGCCAGCGGTTTTGACTCTGACTaGCGGCATTCCATCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WKTMPVSSGPEALNSQASGFDSD*RHSIKH Trigger: ATGCTTGATGGAATGCCGGCAGTCAGAGTCAAAACC...GCTGGCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACAGGCATTGTTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| 3UTR CAA 72 bp | CATCTCTGCTTTGTCTCGTTTTCATGTTCAGTGACTTaGCCTGGGCAGCTCCACCTCTTACCGTGGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLCFVSFSCSVT*PGQLHLLPWCQ Trigger: CTGGCACCACGGTAAGAGGTGGAGCTGCCCAGGCAAAGTCACTGAACATGAAAACGAGACAAAGCAGAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| CDS-3UTR TCA 90 bp | GGCATGAGGACAAGGTATGAGCGCTATCTAGCACAGAGGGCTACTTCTGTGTGCAGGTCCTGGCTTTGTTaGTTGACAAGTCCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GMRTRYERYLAQRATSVCRSWLC*LTSPLA Trigger: AGCCAGTGGACTTGTCAATCAACAAAGCCAGGACCT...GCACACAGAAGTAGCCCTCTGTGCTAGATAGCGCTCATACCTTGTCCTCATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR TCA 90 bp | TACTTCTGTGTGCCTTTGTTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCCACAGTCCGCGCACTTaGATGGCTTCACTCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YFCVPLFLGNRVPPIAPSHSPRT*MASLPC Trigger: ACACGGGAGTGAAGCCATTCAAGTGCGCGGACTGTG...GGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAACAAAGGCACACAGAAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR TCA 90 bp | ATCTTTTCAATGGCAGAGGACATAGCATGGAAAACAATGCCTGTCTCTTCAGGAGGAGACAGGGGAGGATaGCGCTGCAGTAGGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IFSMAEDIAWKTMPVSSGGDRGG*RCSRGG Trigger: ACCTCCCCTACTGCAGCGTCATCCTCCCCTGTCTCC...TCCTGAAGAGACAGGCATTGTTTTCCATGCTATGTCCTCTGCCATTGAAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR TCA 90 bp | AACTGGCAAGATGCTTTCTCAGTGGAGAAAGGACTGGCTCCTACGAGAGCAGACGTTCACATTTCCAGGTaGCCGTACAGCTGTGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NWQDAFSVEKGLAPTRADVHISR*PYSCVD Trigger: GTCTACACAGCTGTACGGTCACCTGGAAATGTGAAC...GTCTGCTCTCGTAGGAGCCAGTCCTTTCTCCACTGAGAAAGCATCTTGCCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| CDS-3UTR GCA 90 bp | AGGACAAGGTATGAGCGCTATCTAGCACAGAGGGCTACTTCTGTGTGCCTTTGTGCTCCATTTGTGCTTTaGCATGGCTCCTCCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RTRYERYLAQRATSVCLCAPFVL*HGSSHP Trigger: AGGATGGGAGGAGCCATGGCAAAGCACAAATGGAGC...ACAAAGGCACACAGAAGTAGCCCTCTGTGCTAGATAGCGCTCATACCTTGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAGCTCACTTCCCCACATCTTCCTTATGCTGCTAGAGAGGTACGACTCTCTGCTCCATTTGTGCTTTaGCATGGCTCCTCCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: EELTSPHLPYAAREVRLSAPFVL*HGSSHP Trigger: AGGATGGGAGGAGCCATGGCAAAGCACAAATGGAGC...AGAGAGTCGTACCTCTCTAGCAGCATAAGGAAGATGTGGGGAAGTGAGCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| CDS-3UTR GCA 90 bp | GGCATGAGGACAAGGTATGAGCGCTATCTAGCACAGAGGGCTACTTCTGTGTGCATGTACCTCTTGTACTaGTCTGGCTATGGAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GMRTRYERYLAQRATSVCMYLLY*SGYGKG Trigger: GCCCTTTCCATAGCCAGAGCAGTACAAGAGGTACAT...GCACACAGAAGTAGCCCTCTGTGCTAGATAGCGCTCATACCTTGTCCTCATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | TACTTCTGTGTGCCTTTGTTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCGTACTGCTCTGGCTATaGAAAGGGCCGTGGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YFCVPLFLGNRVPPIAPSVLLWL*KGPWIQ Trigger: CTGGATCCACGGCCCTTTCCATAGCCAGAGCAGTAC...GGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAACAAAGGCACACAGAAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATGCTGCTGGATGCGCCGTTTCCTaGAGTCTGGGGATTCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: FLGNRVPPIAPSFLVHAAGCAVS*SLGILI Trigger: GATCAGAATCCCCAGACTCCAGGAAACGGCGCATCC...AGCAGCATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| 3UTR CAA 72 bp | GCGCTATCTAGCACAGAGGGCTACTTCTGTGTGCCTTaGTTTTTGGGTAACAGAGTGCCTCCAATAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALSSTEGYFCVP*FLGNRVPPIAP Trigger: AGGGGCTATTGGAGGCACTCTGTTACCCAAAAACAAAGGCACACAGAAGTAGCCCTCTGTGCTAGATAGCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTGTTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATGTAGACAACCGGCACTaGCTGTACCACCACAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLFLGNRVPPIAPSFLVHVDNRH*LYHHRD Trigger: ATCCCTGTGGTGGTACAGTCAGTGCCGGTTGTCTAC...ATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAACAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTGTTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATGGAGTCTGGGGATTCTaGTCGTCTCTGGCGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLFLGNRVPPIAPSFLVHGVWGF*SSLASC Trigger: ACAAGACGCCAGAGACGATCAGAATCCCCAGACTCC...ATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAACAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR GCA 90 bp | AACTGGCAAGATGCTTTCTCAGTGGAGAAAGGACTGGCTCCTACGAGAGCAGACGTGTGTTCTCCGGTGTaGCTTCAGGTGAGAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NWQDAFSVEKGLAPTRADVCSPV*LQVRTF Trigger: AAAAGTTCTCACCTGAAGGCACACCGGAGAACACAC...GTCTGCTCTCGTAGGAGCCAGTCCTTTCTCCACTGAGAAAGCATCTTGCCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTTTCAATGGCAGAGGACATAGCATGGAAAACAATGCCTGTCTCTTCAGGAAGGCGGACGCTGTCATaGAGACAGGGGAGGATGACG | + |
|
Preference number: 4 (lower is better) Translates to: IFSMAEDIAWKTMPVSSGRRTLS*RQGRMT Trigger: CGTCATCCTCCCCTGTCTCCATGACAGCGTCCGCCT...TCCTGAAGAGACAGGCATTGTTTTCCATGCTATGTCCTCTGCCATTGAAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATGCTGCTATTTGTGCTTTGCCATaGCTCCTCCCATCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLGNRVPPIAPSFLVHAAICALP*LLPSSR Trigger: CCTGGAGGATGGGAGGAGCCATGGCAAAGCACAAAT...AGCAGCATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | AACTGGCAAGATGCTTTCTCAGTGGAGAAAGGACTGGCTCCTACGAGAGCAGACGATTCTGATCGTCTCTaGCGTCTTGTGCTCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: NWQDAFSVEKGLAPTRADDSDRL*RLVLSM Trigger: CATTGAGAGCACAAGACGCCAGAGACGATCAGAATC...GTCTGCTCTCGTAGGAGCCAGTCCTTTCTCCACTGAGAAAGCATCTTGCCAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTGTTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATGGATGCGCCGTTTCCTaGAGTCTGGGGATTCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: PLFLGNRVPPIAPSFLVHGCAVS*SLGILI Trigger: GATCAGAATCCCCAGACTCCAGGAAACGGCGCATCC...ATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAACAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTGTTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATAGTCACATCTGTGGATaGGCCGTTTCCTGGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLFLGNRVPPIAPSFLVHSHICG*AVSWSL Trigger: CAGACTCCAGGAAACGGCGCATCCACAGATGTGACT...ATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAACAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | AACTGGCAAGATGCTTTCTCAGTGGAGAAAGGACTGGCTCCTACGAGAGCAGACGTAGTTGTGGACGTTTaGAGACCCTTGTTCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: NWQDAFSVEKGLAPTRADVVVDV*RPLFRF Trigger: GAATCTGAACAAGGGTCTCCAAACGTCCACAACTAC...GTCTGCTCTCGTAGGAGCCAGTCCTTTCTCCACTGAGAAAGCATCTTGCCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | AGCTACAAACATCTTTTCAATGGCAGAGGACATAGCATGGAAAACAATGCCTGTAGGCGGACGCTGTCATaGAGACAGGGGAGGATGACG | + |
|
Preference number: 4 (lower is better) Translates to: SYKHLFNGRGHSMENNACRRTLS*RQGRMT Trigger: CGTCATCCTCCCCTGTCTCCATGACAGCGTCCGCCT...ACAGGCATTGTTTTCCATGCTATGTCCTCTGCCATTGAAAAGATGTTTGTAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTGTTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATGTAAGTTCATGGGACTaGAAGGTGGGACCGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLFLGNRVPPIAPSFLVHVSSWD*KVGPDG Trigger: TCCATCCGGTCCCACCTTCCAGTCCCATGAACTTAC...ATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAACAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTGTTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATATTTGTGCTTTGCCATaGCTCCTCCCATCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLFLGNRVPPIAPSFLVHICALP*LLPSSR Trigger: CCTGGAGGATGGGAGGAGCCATGGCAAAGCACAAAT...ATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAACAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| 3UTR CAA 72 bp | TCTAGCACAGAGGGCTACTTCTGTGTGCCTTTGTTTTaGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSTEGYFCVPLF*GNRVPPIAPSF Trigger: AAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAACAAAGGCACACAGAAGTAGCCCTCTGTGCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTGTTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATAGGTCCTGGCTTTGTTaGTTGACAAGTCCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLFLGNRVPPIAPSFLVHRSWLC*LTSPLA Trigger: AGCCAGTGGACTTGTCAATCAACAAAGCCAGGACCT...ATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAACAAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATGCTGCTGATTCTGATCGTCTCTaGCGTCTTGTGCTCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: FLGNRVPPIAPSFLVHAADSDRL*RLVLSM Trigger: CATTGAGAGCACAAGACGCCAGAGACGATCAGAATC...AGCAGCATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTGTTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATATGTACCTCTTGTACTaGTCTGGCTATGGAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLFLGNRVPPIAPSFLVHMYLLY*SGYGKG Trigger: GCCCTTTCCATAGCCAGAGCAGTACAAGAGGTACAT...ATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAACAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTGTTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATGTGTGTTCTCCGGTGTaGCTTCAGGTGAGAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLFLGNRVPPIAPSFLVHVCSPV*LQVRTF Trigger: AAAAGTTCTCACCTGAAGGCACACCGGAGAACACAC...ATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAACAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTTTCAATGGCAGAGGACATAGCATGGAAAACAATGCCTGTCTCTTCAGGAGAAGGTGGGACCGGATaGATGATGTGCAAGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: IFSMAEDIAWKTMPVSSGEGGTG*MMCKNC Trigger: GCAGTTCTTGCACATCATCCATCCGGTCCCACCTTC...TCCTGAAGAGACAGGCATTGTTTTCCATGCTATGTCCTCTGCCATTGAAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR TCA 90 bp | TGTGCTTGCAACTCTTCTAAAAATATCGCTATGTCAAGAAGAGGGAAACGTTGTGGAGTCTGGGGATTCTaGTCGTCTCTGGCGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CACNSSKNIAMSRRGKRCGVWGF*SSLASC Trigger: ACAAGACGCCAGAGACGATCAGAATCCCCAGACTCC...ACAACGTTTCCCTCTTCTTGACATAGCGATATTTTTAGAAGAGTTGCAAGCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| CDS-3UTR GCA 90 bp | AGCTACAAACATCTTTTCAATGGCAGAGGACATAGCATGGAAAACAATGCCTGTAGTCACATCTGTGGATaGGCCGTTTCCTGGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYKHLFNGRGHSMENNACSHICG*AVSWSL Trigger: CAGACTCCAGGAAACGGCGCATCCACAGATGTGACT...ACAGGCATTGTTTTCCATGCTATGTCCTCTGCCATTGAAAAGATGTTTGTAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGTCCTCAGTGGAGTTATTGTAGGAAAGTCCTTCTATTCATTATTGCTTTTCCTCTTGTACTGCTCTaGCTATGGAAAGGGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSPQWSYCRKVLLFIIAFPLVLL*LWKGPW Trigger: CCACGGCCCTTTCCATAGCCAGAGCAGTACAAGAGG...AAAAGCAATAATGAATAGAAGGACTTTCCTACAATAACTCCACTGAGGACTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | AGGACAAGGTATGAGCGCTATCTAGCACAGAGGGCTACTTCTGTGTGCCTTTGTGAACAAGCAAACTTCTaGTTATTCATTCGATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RTRYERYLAQRATSVCLCEQANF*LFIRFP Trigger: AGGAAATCGAATGAATAACCAGAAGTTTGCTTGTTC...ACAAAGGCACACAGAAGTAGCCCTCTGTGCTAGATAGCGCTCATACCTTGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATGCTGCTGAACAAGCAAACTTCTaGTTATTCATTCGATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLGNRVPPIAPSFLVHAAEQANF*LFIRFP Trigger: AGGAAATCGAATGAATAACCAGAAGTTTGCTTGTTC...AGCAGCATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR GCA 90 bp | GTGAGTCCTCAGTGGAGTTATTGTAGGAAAGTCCTTCTATTCATTATTGCTTTTGGTTTTGACTCTGACTaGCGGCATTCCATCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSPQWSYCRKVLLFIIAFGFDSD*RHSIKH Trigger: ATGCTTGATGGAATGCCGGCAGTCAGAGTCAAAACC...AAAAGCAATAATGAATAGAAGGACTTTCCTACAATAACTCCACTGAGGACTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR CAA 72 bp | TTTATCAATAGAACTACAGCCCTTGGAGGAGGGAAATaGCCTGATGAAGTTTTTATACCTGGCAGAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: FINRTTALGGGK*PDEVFIPGRKC Trigger: ACATTTTCTGCCAGGTATAAAAACTTCATCAGGCAATTTCCCTCCTCCAAGGGCTGTAGTTCTATTGATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| 3UTR CAA 72 bp | AGTGGAGTTATTGTAGGAAAGTCCTTCTATTCATTATaGCTTTTCTCCTCAAGAAGAGCATTATTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SGVIVGKSFYSL*LFSSRRALFPS Trigger: AGATGGAAATAATGCTCTTCTTGAGGAGAAAAGCAATAATGAATAGAAGGACTTTCCTACAATAACTCCACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| CDS-3UTR CAA 90 bp | CGTGGGAATGGCGGTGCCCTTGACGTTAACACTGTAGAGGGAGCTCAGCCCTGCTCACAGTCCGCGCACTaGAATGGCTTCACTCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGNGGALDVNTVEGAQPCSQSAH*NGFTPV Trigger: CACGGGAGTGAAGCCATTCAAGTGCGCGGACTGTGA...GCAGGGCTGAGCTCCCTCTACAGTGTTAACGTCAAGGGCACCGCCATTCCCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCTGTCTCTTCAGGACCTGAGGCGCTGAACTCCCAGGCCAGCGTGAACGCAGAGGTCCTGGCTTTGTaGATTGACAAGTCCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MPVSSGPEALNSQASVNAEVLAL*IDKSTG Trigger: GCCAGTGGACTTGTCAATCAACAAAGCCAGGACCTC...TGCGTTCACGCTGGCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACAGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCTGTCTCTTCAGGACCTGAGGCGCTGAACTCCCAGGCCAGCGTGAACGCAGTCCACTGGCTCAGTTaGTGTCTGAAAGTGATCTAC | + |
|
Preference number: 5 (lower is better) Translates to: MPVSSGPEALNSQASVNAVHWLS*CLKVIY Trigger: GTAGATCACTTTCAGACACAAACTGAGCCAGTGGAC...TGCGTTCACGCTGGCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACAGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS CCA 90 bp | AGTTTGTTAGACTGTAAGTTCATGGGACTGGAAGGTGGGACCGGATaGATGATGTGCAAGAACTGCTGGCCGCCCACGCCAGATGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLDCKFMGLEGGTG*MMCKNCWPPTPDAE Trigger: CTCTGCATCTGGCGTGGGCGGCCAGCAGTTCTTGCACATCATCCATCCGGTCCCACCTTCCAGTCCCATGAACTTACAGTCTAACAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAAACAATGCCTGTCTCTTCAGGACCTGAGGCGCTGAACTCCCAGGCCAGCGACGTTTGGAGACCCTaGTTCAGATTCCACAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WKTMPVSSGPEALNSQASDVWRP*FRFHKL Trigger: GAGCTTGTGGAATCTGAACAAGGGTCTCCAAACGTC...GCTGGCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACAGGCATTGTTTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATGCTGCTGCCTCGGGGCTCCATTaGTGCTTTGCCATGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FLGNRVPPIAPSFLVHAAASGLH*CFAMAP Trigger: AGGAGCCATGGCAAAGCACAAATGGAGCCCCGAGGC...AGCAGCATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS CCA 90 bp | TCACATTTGGCAGGTCATCATCGTCACTGTCACTTTTACTCTGTCTaGGAGATAGGCCTCGGGGCTCCATTTGTGCTTTGCCATGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHLAGHHRHCHFYSV*EIGLGAPFVLCHGS Trigger: GGAGCCATGGCAAAGCACAAATGGAGCCCCGAGGCCTATCTCCCAGACAGAGTAAAAGTGACAGTGACGATGATGACCTGCCAAATGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAAACAATGCCTGTCTCTTCAGGACCTGAGGCGCTGAACTCCCAGGCCAGCTATCTAAGGTCACATTaGGCAGGTCATCATCGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: WKTMPVSSGPEALNSQASYLRSH*AGHHRH Trigger: GTGACGATGATGACCTGCCAAATGTGACCTTAGATA...GCTGGCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACAGGCATTGTTTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CAA 90 bp | GGCATGAGGACAAGGTATGAGCGCTATCTAGCACAGAGGGCTACTTCTGTGTGCGGATGGATGTACCTCTaGTACTGCTCTGGCTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: GMRTRYERYLAQRATSVCGWMYL*YCSGYG Trigger: TCCATAGCCAGAGCAGTACAAGAGGTACATCCATCC...GCACACAGAAGTAGCCCTCTGTGCTAGATAGCGCTCATACCTTGTCCTCATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATGCTGCTTCACAGTCCGCGCACTaGAATGGCTTCACTCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLGNRVPPIAPSFLVHAASQSAH*NGFTPV Trigger: CACGGGAGTGAAGCCATTCAAGTGCGCGGACTGTGA...AGCAGCATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS CCA 90 bp | CTGTGGATGCGCCGTTTCCTGGAGTCTGGGGATTCTGATCGTCTCTaGCGTCTTGTGCTCTCAATGCTAAATGGTGAGATTGAACAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LWMRRFLESGDSDRL*RLVLSMLNGEIEQA Trigger: TGCTTGTTCAATCTCACCATTTAGCATTGAGAGCACAAGACGCCAGAGACGATCAGAATCCCCAGACTCCAGGAAACGGCGCATCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CAA 90 bp | AGGACAAGGTATGAGCGCTATCTAGCACAGAGGGCTACTTCTGTGTGCCTTTGTTCCACAAGCTCGGTTTaGACTCTGACTGCCGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: RTRYERYLAQRATSVCLCSTSSV*TLTAGI Trigger: AATGCCGGCAGTCAGAGTCAAAACCGAGCTTGTGGA...ACAAAGGCACACAGAAGTAGCCCTCTGTGCTAGATAGCGCTCATACCTTGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAAACAATGCCTGTCTCTTCAGGACCTGAGGCGCTGAACTCCCAGGCCAGCGGTACAACAATAGTGTaGTTCACATTTCCAGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: WKTMPVSSGPEALNSQASGTTIV*FTFPGD Trigger: GTCACCTGGAAATGTGAACAACACTATTGTTGTACC...GCTGGCCTGGGAGTTCAGCGCCTCAGGTCCTGAAGAGACAGGCATTGTTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CAA 90 bp | AACTGGCAAGATGCTTTCTCAGTGGAGAAAGGACTGGCTCCTACGAGAGCAGACGGATGGATGTACCTCTaGTACTGCTCTGGCTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: NWQDAFSVEKGLAPTRADGWMYL*YCSGYG Trigger: TCCATAGCCAGAGCAGTACAAGAGGTACATCCATCC...GTCTGCTCTCGTAGGAGCCAGTCCTTTCTCCACTGAGAAAGCATCTTGCCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTGGGTAACAGAGTGCCTCCAATAGCCCCTTCCTTTCTAGTCCATGCTGCTGAGGTCCTGGCTTTGTaGATTGACAAGTCCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLGNRVPPIAPSFLVHAAEVLAL*IDKSTG Trigger: GCCAGTGGACTTGTCAATCAACAAAGCCAGGACCTC...AGCAGCATGGACTAGAAAGGAAGGGGCTATTGGAGGCACTCTGTTACCCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTTTCAATGGCAGAGGACATAGCATGGAAAACAATGCCTGTCTCTTCAGGAGCCTCGGGGCTCCATTaGTGCTTTGCCATGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IFSMAEDIAWKTMPVSSGASGLH*CFAMAP Trigger: AGGAGCCATGGCAAAGCACAAATGGAGCCCCGAGGC...TCCTGAAGAGACAGGCATTGTTTTCCATGCTATGTCCTCTGCCATTGAAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
||
| CDS-3UTR CAA 90 bp | AGGACAAGGTATGAGCGCTATCTAGCACAGAGGGCTACTTCTGTGTGCCTTTGTGTCCACTGGCTCAGTTaGTGTCTGAAAGTGATCTAC | + |
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Preference number: 5 (lower is better) Translates to: RTRYERYLAQRATSVCLCVHWLS*CLKVIY Trigger: GTAGATCACTTTCAGACACAAACTGAGCCAGTGGAC...ACAAAGGCACACAGAAGTAGCCCTCTGTGCTAGATAGCGCTCATACCTTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| CDS CCA 90 bp | TTGAACAAGCAAACTTCTGGTTATTCATTCGATTTCCTCGGACCCTaGATACCGGGGATGGATGTACCTCTTGTACTGCTCTGGCTATGG | + |
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Preference number: 5 (lower is better) Translates to: LNKQTSGYSFDFLGP*IPGMDVPLVLLWLW Trigger: CCATAGCCAGAGCAGTACAAGAGGTACATCCATCCCCGGTATCCAGGGTCCGAGGAAATCGAATGAATAACCAGAAGTTTGCTTGTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| CDS-3UTR CAA 90 bp | AGCTACAAACATCTTTTCAATGGCAGAGGACATAGCATGGAAAACAATGCCTGTTCCACAAGCTCGGTTTaGACTCTGACTGCCGGCATT | + |
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Preference number: 5 (lower is better) Translates to: SYKHLFNGRGHSMENNACSTSSV*TLTAGI Trigger: AATGCCGGCAGTCAGAGTCAAAACCGAGCTTGTGGA...ACAGGCATTGTTTTCCATGCTATGTCCTCTGCCATTGAAAAGATGTTTGTAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| CDS-3UTR CAA 90 bp | AGCTACAAACATCTTTTCAATGGCAGAGGACATAGCATGGAAAACAATGCCTGTGGGGAGGTCCTGGCTTaGTTGATTGACAAGTCCACT | + |
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Preference number: 5 (lower is better) Translates to: SYKHLFNGRGHSMENNACGEVLA*LIDKST Trigger: AGTGGACTTGTCAATCAACAAAGCCAGGACCTCCCC...ACAGGCATTGTTTTCCATGCTATGTCCTCTGCCATTGAAAAGATGTTTGTAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| CDS-3UTR CAA 90 bp | AATAGAACTACAGCCCTTGGAGGAGGGAAATTGCCTGATGAAGTTTTTATACCTGGGGAGGTCCTGGCTTaGTTGATTGACAAGTCCACT | + |
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Preference number: 5 (lower is better) Translates to: NRTTALGGGKLPDEVFIPGEVLA*LIDKST Trigger: AGTGGACTTGTCAATCAACAAAGCCAGGACCTCCCC...AGGTATAAAAACTTCATCAGGCAATTTCCCTCCTCCAAGGGCTGTAGTTCTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| CDS-3UTR CAA 90 bp | AGCTACAAACATCTTTTCAATGGCAGAGGACATAGCATGGAAAACAATGCCTGTGACGTTTGGAGACCCTaGTTCAGATTCCACAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: SYKHLFNGRGHSMENNACDVWRP*FRFHKL Trigger: GAGCTTGTGGAATCTGAACAAGGGTCTCCAAACGTC...ACAGGCATTGTTTTCCATGCTATGTCCTCTGCCATTGAAAAGATGTTTGTAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| CDS-3UTR CAA 90 bp | ATAAGTCTCAGTTCTTGGGCCAGATCAGGGATGTGTTCATTTGTGCTTGCAACTTATCTAAGGTCACATTaGGCAGGTCATCATCGTCAC | + |
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Preference number: 5 (lower is better) Translates to: ISLSSWARSGMCSFVLATYLRSH*AGHHRH Trigger: GTGACGATGATGACCTGCCAAATGTGACCTTAGATA...AGTTGCAAGCACAAATGAACACATCCCTGATCTGGCCCAAGAACTGAGACTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228216.2 |
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| CDS-3UTR CAA 90 bp | AGCTACAAACATCTTTTCAATGGCAGAGGACATAGCATGGAAAACAATGCCTGTGGTAGTTGTGGACGTTaGGAGACCCTTGTTCAGATT | + |
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Preference number: 5 (lower is better) Translates to: SYKHLFNGRGHSMENNACGSCGR*ETLVQI Trigger: AATCTGAACAAGGGTCTCCAAACGTCCACAACTACC...ACAGGCATTGTTTTCCATGCTATGTCCTCTGCCATTGAAAAGATGTTTGTAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| CDS GCA 72 bp | GTCTGGGAGATAGGCCTCGGGGCTCCATTTGTGCTTTaGCATGGCTCCTCCCATCCTCCAGGAGCGGTACAA | + |
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Preference number: 6 (lower is better) Translates to: VWEIGLGAPFVL*HGSSHPPGAVQ Trigger: TTGTACCGCTCCTGGAGGATGGGAGGAGCCATGGCAAAGCACAAATGGAGCCCCGAGGCCTATCTCCCAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| CDS TCA 72 bp | GTAAGTTCATGGGACTGGAAGGTGGGACCGGATGGATaGTGTGCAAGAACTGCTGGCCGCCCACGCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: VSSWDWKVGPDG*CARTAGRPRQM Trigger: CATCTGGCGTGGGCGGCCAGCAGTTCTTGCACATCATCCATCCGGTCCCACCTTCCAGTCCCATGAACTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| CDS CCA 72 bp | GACTGTAAGTTCATGGGACTGGAAGGTGGGACCGGATaGATGATGTGCAAGAACTGCTGGCCGCCCACGCCA | + |
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Preference number: 6 (lower is better) Translates to: DCKFMGLEGGTG*MMCKNCWPPTP Trigger: TGGCGTGGGCGGCCAGCAGTTCTTGCACATCATCCATCCGGTCCCACCTTCCAGTCCCATGAACTTACAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| CDS CAA 72 bp | TCCTCGGACCCTGGATACCGGGGATGGATGTACCTCTaGTACTGCTCTGGCTATGGAAAGGGCCGTGGATCC | + |
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Preference number: 6 (lower is better) Translates to: SSDPGYRGWMYL*YCSGYGKGRGS Trigger: GGATCCACGGCCCTTTCCATAGCCAGAGCAGTACAAGAGGTACATCCATCCCCGGTATCCAGGGTCCGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| CDS CCA 72 bp | ACCCTTCGAAGTCACATCTGTGGATGCGCCGTTTCCTaGAGTCTGGGGATTCTGATCGTCTCTGGCGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: TLRSHICGCAVS*SLGILIVSGVL Trigger: CAAGACGCCAGAGACGATCAGAATCCCCAGACTCCAGGAAACGGCGCATCCACAGATGTGACTTCGAAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| CDS TCA 72 bp | TCTGTGGATGCGCCGTTTCCTGGAGTCTGGGGATTCTaGTCGTCTCTGGCGTCTTGTGCTCTCAATGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: SVDAPFPGVWGF*SSLASCALNAK Trigger: TTTAGCATTGAGAGCACAAGACGCCAGAGACGATCAGAATCCCCAGACTCCAGGAAACGGCGCATCCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| CDS CAA 90 bp | CATTCGATTTCCTCGGACCCTGGATACCGGGGATGGATGTACCTCTaGTACTGCTCTGGCTATGGAAAGGGCCGTGGATCCAGTTTCATT | + |
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Preference number: 6 (lower is better) Translates to: HSISSDPGYRGWMYL*YCSGYGKGRGSSFI Trigger: AATGAAACTGGATCCACGGCCCTTTCCATAGCCAGAGCAGTACAAGAGGTACATCCATCCCCGGTATCCAGGGTCCGAGGAAATCGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| CDS CCA 72 bp | CGCCGTTTCCTGGAGTCTGGGGATTCTGATCGTCTCTaGCGTCTTGTGCTCTCAATGCTAAATGGTGAGATT | + |
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Preference number: 6 (lower is better) Translates to: RRFLESGDSDRL*RLVLSMLNGEI Trigger: AATCTCACCATTTAGCATTGAGAGCACAAGACGCCAGAGACGATCAGAATCCCCAGACTCCAGGAAACGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| CDS CCA 72 bp | CAAACTTCTGGTTATTCATTCGATTTCCTCGGACCCTaGATACCGGGGATGGATGTACCTCTTGTACTGCTC | + |
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Preference number: 6 (lower is better) Translates to: QTSGYSFDFLGP*IPGMDVPLVLL Trigger: GAGCAGTACAAGAGGTACATCCATCCCCGGTATCCAGGGTCCGAGGAAATCGAATGAATAACCAGAAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097079.5 ENSMUST00000228216.2 |
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| CDS CAA 90 bp | TTGTGGACGTTTGGAGACCCTTGTTCAGATTCCACAAGCTCGGTTTaGACTCTGACTGCCGGCATTCCATCAAGCATTAGCATTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: LWTFGDPCSDSTSSV*TLTAGIPSSISILF Trigger: GAACAGAATGCTAATGCTTGATGGAATGCCGGCAGTCAGAGTCAAAACCGAGCTTGTGGAATCTGAACAAGGGTCTCCAAACGTCCACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097079.5 ENSMUST00000226774.2 ENSMUST00000228216.2 |
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