Pregenerated sensors for KLF11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020653Ensembl transcript IDs: ENSMUST00000020982.7, ENSMUST00000139940.2, ENSMUST00000144046.2, ENSMUST00000146894.8
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGATGGCCCAGGAGTCCACATTCCATATTTGCCCCTGCTCAGCTaGCCAGCAGCCCAGGCAGACTGGGCACACCTTCCACAGGGACAC | + |
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Preference number: 1 (lower is better) Translates to: TDGPGVHIPYLPLLS*PAAQADWAHLPQGH Trigger: GTGTCCCTGTGGAAGGTGTGCCCAGTCTGCCTGGGCTGCTGGCCAGCTGAGCAGGGGCAAATATGGAATGTGGACTCCTGGGCCATCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR GCA 90 bp | TTTGCTCTTAGCAGACAGATGGCCCAGGAGTCCACATTCCATATTTaGCCCTGCTCAGCTGGCCAGCAGCCCAGGCAGACTGGGCACACC | + |
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Preference number: 1 (lower is better) Translates to: FALSRQMAQESTFHI*PCSAGQQPRQTGHT Trigger: GGTGTGCCCAGTCTGCCTGGGCTGCTGGCCAGCTGAGCAGGGGCAAATATGGAATGTGGACTCCTGGGCCATCTGTCTGCTAAGAGCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CCA 90 bp | ATTCCATATTTGCCCCTGCTCAGCTGGCCAGCAGCCCAGGCAGACTaGGCACACCTTCCACAGGGACACGAGACTCACATGATTAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: IPYLPLLSWPAAQAD*AHLPQGHETHMISF Trigger: AAAACTAATCATGTGAGTCTCGTGTCCCTGTGGAAGGTGTGCCCAGTCTGCCTGGGCTGCTGGCCAGCTGAGCAGGGGCAAATATGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR TCA 90 bp | AAGTTGGATGCCATTTATCACTTACACGGTCGCCAGTGTGGATGCTaGCTTAAAACAGGTGGACAGGACCAGGGTGCTGGGACACACGTG | + |
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Preference number: 1 (lower is better) Translates to: KLDAIYHLHGRQCGC*LKTGGQDQGAGTHV Trigger: CACGTGTGTCCCAGCACCCTGGTCCTGTCCACCTGTTTTAAGTCAGCATCCACACTGGCGACCGTGTAAGTGATAAATGGCATCCAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR GCA 90 bp | GAACCCCAGAGCCGAATGTGCACAAAGGCCTTGCTTTGTGGAAGCTaGACTCTGGCGGAGAGTTTAACCAACCAGTACAGACATTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: EPQSRMCTKALLCGS*TLAESLTNQYRHFL Trigger: AAGGAAATGTCTGTACTGGTTGGTTAAACTCTCCGCCAGAGTGCAGCTTCCACAAAGCAAGGCCTTTGTGCACATTCGGCTCTGGGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR GCA 90 bp | GCAAATACAAAACCTAATACATACCACACAAAAATAGTCTCAGGCTaGCCAAACAGCACAATATACCTGTTATCACACTTGCTGTACTGC | + |
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Preference number: 1 (lower is better) Translates to: ANTKPNTYHTKIVSG*PNSTIYLLSHLLYC Trigger: GCAGTACAGCAAGTGTGATAACAGGTATATTGTGCTGTTTGGGCAGCCTGAGACTATTTTTGTGTGGTATGTATTAGGTTTTGTATTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR GCA 90 bp | CCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGTCCACATTCCATATTTaGCCCTGCTCAGCTGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PPRRGDLGRALKGAATPGSTFHI*PCSAGQ Trigger: CTGGCCAGCTGAGCAGGGGCAAATATGGAATGTGGA...CCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR GCA 90 bp | CACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGGCGCTACCCACAGAAATaGCAGGACAAGGAACAGCAC | + |
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Preference number: 2 (lower is better) Translates to: HHAVGIWGGPSREQPLPGRYPQK*QDKEQH Trigger: GTGCTGTTCCTTGTCCTGGCATTTCTGTGGGTAGCG...CCCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR GCA 90 bp | CCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGTGTGCACAAAGGCCTTaGTTTGTGGAAGCTGCACTC | + |
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Preference number: 2 (lower is better) Translates to: PPRRGDLGRALKGAATPGCAQRP*FVEAAL Trigger: GAGTGCAGCTTCCACAAAGCAAGGCCTTTGTGCACA...CCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR CCA 90 bp | CACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGGAGCAAGACTGCTGTCTaGGCAGTTCCTAAACACATG | + |
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Preference number: 2 (lower is better) Translates to: HHAVGIWGGPSREQPLPGSKTAV*AVPKHM Trigger: CATGTGTTTAGGAACTGCCCAGACAGCAGTCTTGCT...CCCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR TCA 90 bp | CACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGGTTCCTTCACACACAATaGTTGAAAAAGCAGTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: HHAVGIWGGPSREQPLPGFLHTQ*LKKQLG Trigger: ACCCAACTGCTTTTTCAATCATTGTGTGTGAAGGAA...CCCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR GCA 90 bp | CCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGTTGGGTGACAGCCACTaGCATTTAATGATATGTTTC | + |
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Preference number: 2 (lower is better) Translates to: PPRRGDLGRALKGAATPGLGDSH*HLMICF Trigger: GAAACATATCATTAAATGGCAGTGGCTGTCACCCAA...CCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR TCA 90 bp | CCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGATTTTTGCTTCTTTCTaGCTAACTACCAGGCTTACT | + |
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Preference number: 2 (lower is better) Translates to: PPRRGDLGRALKGAATPGIFASF*LTTRLT Trigger: AGTAAGCCTGGTAGTTAGTCAGAAAGAAGCAAAAAT...CCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR TCA 90 bp | GGGTCACCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCTCTGCATGTCACAATaGAAAAAGACATCCAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: GSPPRRGDLGRALKGAATLCMSQ*KKTSKL Trigger: CAACTTGGATGTCTTTTTTCATTGTGACATGCAGAG...AGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGGTGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR GCA 90 bp | GCCTTCCGCTACCCACAGAAATGCCAGGACAAGGAACAGCACTCTGCATGTCACTTCCATATTTGCCCCTaGTCAGCTGGCCAGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: AFRYPQKCQDKEQHSACHFHICP*SAGQQP Trigger: GGGCTGCTGGCCAGCTGAGCAGGGGCAAATATGGAA...GTGACATGCAGAGTGCTGTTCCTTGTCCTGGCATTTCTGTGGGTAGCGGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR GCA 90 bp | CACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGGAACATACAGAGTTTCTaGGTCTACATTCTTAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: HHAVGIWGGPSREQPLPGNIQSF*VYILSV Trigger: AACACTAAGAATGTAGACGCAGAAACTCTGTATGTT...CCCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR CCA 90 bp | ACCCGCTCACGAGGCGTAAAAGCAGTGCCTGAAATCTGTTTTCAGGAAAGCTACGCAGCCCAGGCAGACTaGGCACACCTTCCACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: TRSRGVKAVPEICFQESYAAQAD*AHLPQG Trigger: TCCCTGTGGAAGGTGTGCCCAGTCTGCCTGGGCTGC...GTAGCTTTCCTGAAAACAGATTTCAGGCACTGCTTTTACGCCTCGTGAGCGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CAA 90 bp | AGAGGCATCCGAACCCCAGAGCCGAATGTGCACAAAGGCCTTGCTTaGTGGAAGCTGCACTCTGGCGGAGAGTTTAACCAACCAGTACAG | + |
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Preference number: 2 (lower is better) Translates to: RGIRTPEPNVHKGLA*WKLHSGGEFNQPVQ Trigger: CTGTACTGGTTGGTTAAACTCTCCGCCAGAGTGCAGCTTCCACAAAGCAAGGCCTTTGTGCACATTCGGCTCTGGGGTTCGGATGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR CCA 90 bp | GTCTGGGCAGTTCCTAAACACATGTACATACAGAACTCGGCTACCACAGCAGCTAACACAGACAGGACATaGGGTCATTTGCTCTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: VWAVPKHMYIQNSATTAANTDRT*GHLLLA Trigger: TGCTAAGAGCAAATGACCCCATGTCCTGTCTGTGTT...AGCTGCTGTGGTAGCCGAGTTCTGTATGTACATGTGTTTAGGAACTGCCCAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CAA 90 bp | ACATTCTTAGTGTTGGTGCTTAACACAGACAGGACATGGGGTCATTaGCTCTTAGCAGACAGATGGCCCAGGAGTCCACATTCCATATTT | + |
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Preference number: 2 (lower is better) Translates to: TFLVLVLNTDRTWGH*LLADRWPRSPHSIF Trigger: AAATATGGAATGTGGACTCCTGGGCCATCTGTCTGCTAAGAGCAAATGACCCCATGTCCTGTCTGTGTTAAGCACCAACACTAAGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CAA 90 bp | AGCCAACAGGTAACATACAGAGTTTCTGCGTCTACATTCTTAGTGTaGGTGCTTAACACAGACAGGACATGGGGTCATTTGCTCTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: SQQVTYRVSASTFLV*VLNTDRTWGHLLLA Trigger: TGCTAAGAGCAAATGACCCCATGTCCTGTCTGTGTTAAGCACCAACACTAAGAATGTAGACGCAGAAACTCTGTATGTTACCTGTTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR CCA 90 bp | CTGGCGGAGAGTTTAACCAACCAGTACAGACATTTCCTTTTCCCTGTGGTCATTGACCACATTTATTTTTaGAGAGGAACACACAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: LAESLTNQYRHFLFPVVIDHIYF*RGTHRF Trigger: GAACCTGTGTGTTCCTCTCCAAAAATAAATGTGGTC...AATGACCACAGGGAAAAGGAAATGTCTGTACTGGTTGGTTAAACTCTCCGCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CAA 90 bp | ACACACGTGAGCTATATACAGTTAGTTTTCCTGCACTCCATTATGTaGAAAGACATTAGCAAGACTGCTGTCTGGGCAGTTCCTAAACAC | + |
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Preference number: 2 (lower is better) Translates to: THVSYIQLVFLHSIM*KDISKTAVWAVPKH Trigger: GTGTTTAGGAACTGCCCAGACAGCAGTCTTGCTAATGTCTTTCAACATAATGGAGTGCAGGAAAACTAACTGTATATAGCTCACGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR TCA 90 bp | ATAGGAACTGTTTTCCAACTTAGTCTTTCAGTAGACAAATGTTGGGGGCTCTTTGACACGAGACTCACATaGTTAGTTTTACCTAACCAC | + |
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Preference number: 2 (lower is better) Translates to: IGTVFQLSLSVDKCWGLFDTRLT*LVLPNH Trigger: GTGGTTAGGTAAAACTAATCATGTGAGTCTCGTGTC...AAAGAGCCCCCAACATTTGTCTACTGAAAGACTAAGTTGGAAAACAGTTCCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CCA 72 bp | AAAGTGCACTGGGGTCACCACCACGCCGTGGGGATTTaGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGG | + |
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Preference number: 3 (lower is better) Translates to: KVHWGHHHAVGI*GGPSREQPLPG Trigger: CCCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGGTGACCCCAGTGCACTTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR CAA 90 bp | CCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGCACAAAGGCCTTGCTTaGTGGAAGCTGCACTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: PPRRGDLGRALKGAATPGHKGLA*WKLHSG Trigger: GCCAGAGTGCAGCTTCCACAAAGCAAGGCCTTTGTG...CCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CCA 72 bp | CAAGCGATAAAGTGCACTGGGGTCACCACCACGCCGTaGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: QAIKCTGVTTTP*GFGEGPQGSSH Trigger: GTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGGTGACCCCAGTGCACTTTATCGCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR CAA 90 bp | CCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGTTCCTGAAGAGGCTTTaGAAGAAGCCCACAGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: PPRRGDLGRALKGAATPGFLKRL*KKPTGD Trigger: GTCACCTGTGGGCTTCTTCAAAAGCCTCTTCAGGAA...CCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR CAA 90 bp | CCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGATGTTTCTCAGTGTTTaGTCCATAGTCAGAGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: PPRRGDLGRALKGAATPGMFLSV*SIVREA Trigger: TGCCTCTCTGACTATGGACAAAACACTGAGAAACAT...CCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR GCA 72 bp | AGCAGACAGATGGCCCAGGAGTCCACATTCCATATTTaGCCCTGCTCAGCTGGCCAGCAGCCCAGGCAGACT | + |
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Preference number: 3 (lower is better) Translates to: SRQMAQESTFHI*PCSAGQQPRQT Trigger: AGTCTGCCTGGGCTGCTGGCCAGCTGAGCAGGGGCAAATATGGAATGTGGACTCCTGGGCCATCTGTCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR CAA 90 bp | GGGTCACCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCATTCCAAGTCTTCTaGTTTGAGCAAACTAATTTC | + |
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Preference number: 3 (lower is better) Translates to: GSPPRRGDLGRALKGAATPFQVF*FEQTNF Trigger: GAAATTAGTTTGCTCAAACAAGAAGACTTGGAATGG...AGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGGTGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR TCA 72 bp | GCCATTTATCACTTACACGGTCGCCAGTGTGGATGCTaGCTTAAAACAGGTGGACAGGACCAGGGTGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: AIYHLHGRQCGC*LKTGGQDQGAG Trigger: CCCAGCACCCTGGTCCTGTCCACCTGTTTTAAGTCAGCATCCACACTGGCGACCGTGTAAGTGATAAATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR GCA 72 bp | ATAGTCAGAGAGGCATCCGAACCCCAGAGCCGAATGTaGACAAAGGCCTTGCTTTGTGGAAGCTGCACTCTG | + |
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Preference number: 3 (lower is better) Translates to: IVREASEPQSRM*TKALLCGSCTL Trigger: CAGAGTGCAGCTTCCACAAAGCAAGGCCTTTGTGCACATTCGGCTCTGGGGTTCGGATGCCTCTCTGACTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CCA 72 bp | ACCCCAGAGCCGAATGTGCACAAAGGCCTTGCTTTGTaGAAGCTGCACTCTGGCGGAGAGTTTAACCAACCA | + |
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Preference number: 3 (lower is better) Translates to: TPEPNVHKGLAL*KLHSGGEFNQP Trigger: TGGTTGGTTAAACTCTCCGCCAGAGTGCAGCTTCCACAAAGCAAGGCCTTTGTGCACATTCGGCTCTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR GCA 72 bp | ACCAAACACCCCAAGGCCTTCCGCTACCCACAGAAATaGCAGGACAAGGAACAGCACTCTGCATGTCACAAT | + |
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Preference number: 3 (lower is better) Translates to: TKHPKAFRYPQK*QDKEQHSACHN Trigger: ATTGTGACATGCAGAGTGCTGTTCCTTGTCCTGGCATTTCTGTGGGTAGCGGAAGGCCTTGGGGTGTTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CCA 72 bp | GACAGGACATGGGGTCATTTGCTCTTAGCAGACAGATaGCCCAGGAGTCCACATTCCATATTTGCCCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: DRTWGHLLLADR*PRSPHSIFAPA Trigger: AGCAGGGGCAAATATGGAATGTGGACTCCTGGGCCATCTGTCTGCTAAGAGCAAATGACCCCATGTCCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR CAA 90 bp | ACCCGCTCACGAGGCGTAAAAGCAGTGCCTGAAATCTGTTTTCAGGAAAGCTACATGTGCACAAAGGCCTaGCTTTGTGGAAGCTGCACT | + |
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Preference number: 3 (lower is better) Translates to: TRSRGVKAVPEICFQESYMCTKA*LCGSCT Trigger: AGTGCAGCTTCCACAAAGCAAGGCCTTTGTGCACAT...GTAGCTTTCCTGAAAACAGATTTCAGGCACTGCTTTTACGCCTCGTGAGCGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CCA 72 bp | ACATTCTTAGTGTTGGTGCTTAACACAGACAGGACATaGGGTCATTTGCTCTTAGCAGACAGATGGCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: TFLVLVLNTDRT*GHLLLADRWPR Trigger: CCTGGGCCATCTGTCTGCTAAGAGCAAATGACCCCATGTCCTGTCTGTGTTAAGCACCAACACTAAGAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR-3UTR CAA 90 bp | TACCACACAAAAATAGTCTCAGGCTGCCCAAACAGCACAATATACCTGTTATCAAGACCACATTTATTTTaGGAGAGGAACACACAGGTT | + |
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Preference number: 3 (lower is better) Translates to: YHTKIVSGCPNSTIYLLSRPHLF*ERNTQV Trigger: AACCTGTGTGTTCCTCTCCAAAAATAAATGTGGTCT...TGATAACAGGTATATTGTGCTGTTTGGGCAGCCTGAGACTATTTTTGTGTGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR TCA 72 bp | TTTCCTTCACACACAATGATTGAAAAAGCAGTTGGGTaGCAGCCACTGCCATTTAATGATATGTTTCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: FPSHTMIEKAVG*QPLPFNDMFLS Trigger: ACTGAGAAACATATCATTAAATGGCAGTGGCTGTCACCCAACTGCTTTTTCAATCATTGTGTGTGAAGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR TCA 72 bp | GCACAATATACCTGTTATCACACTTGCTGTACTGCCTaGGCTTCCCAGAATTTATCTAAAACCATTCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: AQYTCYHTCCTA*ASQNLSKTILF Trigger: AAACAGAATGGTTTTAGATAAATTCTGGGAAGCTCAGGCAGTACAGCAAGTGTGATAACAGGTATATTGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR GCA 72 bp | AAACCTAATACATACCACACAAAAATAGTCTCAGGCTaGCCAAACAGCACAATATACCTGTTATCACACTTG | + |
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Preference number: 3 (lower is better) Translates to: KPNTYHTKIVSG*PNSTIYLLSHL Trigger: CAAGTGTGATAACAGGTATATTGTGCTGTTTGGGCAGCCTGAGACTATTTTTGTGTGGTATGTATTAGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR TCA 72 bp | AAGGCTGGTAACAAACTTGTTATTTTTGCTTCTTTCTaGCTAACTACCAGGCTTACTCTTAAGCAGGGTTAT | + |
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Preference number: 3 (lower is better) Translates to: KAGNKLVIFASF*LTTRLTLKQGY Trigger: ATAACCCTGCTTAAGAGTAAGCCTGGTAGTTAGTCAGAAAGAAGCAAAAATAACAAGTTTGTTACCAGCCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR TCA 90 bp | CCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGAGCATCACAGTTCCCTaGGGCACAGGTGGGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: PPRRGDLGRALKGAATPGSITVP*GTGGPM Trigger: CATGGGCCCACCTGTGCCTCAGGGAACTGTGATGCT...CCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR GCA 90 bp | CACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGGCCAGTGGTTCCCTCTTaGTCAGTGTTCTGGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: HHAVGIWGGPSREQPLPGPVVPS*SVFWGP Trigger: GGGGCCCCAGAACACTGAGCAAGAGGGAACCACTGG...CCCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR TCA 90 bp | CACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGGGCACAGGTGGGCCCATaGACACAGGCTGAGACATTG | + |
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Preference number: 4 (lower is better) Translates to: HHAVGIWGGPSREQPLPGAQVGP*TQAETL Trigger: CAATGTCTCAGCCTGTGTTCATGGGCCCACCTGTGC...CCCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CCA 90 bp | CACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGGCCAGGACGCTGCATGTaGACCTTTCGCTGTCATGCC | + |
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Preference number: 4 (lower is better) Translates to: HHAVGIWGGPSREQPLPGPGRCM*TFRCHA Trigger: GGCATGACAGCGAAAGGTCCACATGCAGCGTCCTGG...CCCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CCA 90 bp | GGGTCACCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTGGCCATGACACTGGATaGACAGGCAGCAGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPPRRGDLGRALKGAATGHDTG*TGSRLG Trigger: CCCCAGCCTGCTGCCTGTCCATCCAGTGTCATGGCC...AGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGGTGACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR TCA 90 bp | CACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGGTTTGGTAAGCAGGTCTaGACAGCAGCGGGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HHAVGIWGGPSREQPLPGFGKQV*TAAGHP Trigger: AGGATGGCCCGCTGCTGTTCAGACCTGCTTACCAAA...CCCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR TCA 90 bp | CCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGGGCTCTCTGCCAAAGTaGTTCTGTTCAGCTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPRRGDLGRALKGAATPGGSLPK*FCSACP Trigger: TGGGCAAGCTGAACAGAATCACTTTGGCAGAGAGCC...CCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR GCA 90 bp | CCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGGACCCCAAGAGCTCATaGAGACAAGAGCTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PPRRGDLGRALKGAATPGDPKSS*RQELPQ Trigger: CTGTGGAAGCTCTTGTCTGCATGAGCTCTTGGGGTC...CCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CCA 90 bp | CCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGCTCTGCCTGCCAGCCTaGGATCTTCTTGGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPRRGDLGRALKGAATPGLCLPA*DLLGCH Trigger: ATGACAACCAAGAAGATCCCAGGCTGGCAGGCAGAG...CCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR TCA 90 bp | GATGGCCCAGGAGTCCACATTCCATATTTGCCCCTGCTCAGCTGGCCAGCAGCCCTGTTGACGGCTCCGTaGGCTCTGGGCTCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DGPGVHIPYLPLLSWPAALLTAP*ALGSEE Trigger: CTCCTCAGAGCCCAGAGCTCACGGAGCCGTCAACAG...GGCTGCTGGCCAGCTGAGCAGGGGCAAATATGGAATGTGGACTCCTGGGCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR GCA 90 bp | GATGGCCCAGGAGTCCACATTCCATATTTGCCCCTGCTCAGCTGGCCAGCAGCCCAGCTTGCCCACCTCTaGCTGCCAGCCTGGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: DGPGVHIPYLPLLSWPAAQLAHL*LPAWDL Trigger: AAGATCCCAGGCTGGCAGGCAGAGGTGGGCAAGCTG...GGCTGCTGGCCAGCTGAGCAGGGGCAAATATGGAATGTGGACTCCTGGGCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR TCA 90 bp | CCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGAGGGGTGATTTTCCTTaGCAAGTCACTTTCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PPRRGDLGRALKGAATPGRGDFP*QVTFRI Trigger: AATCCTGAAAGTGACTTGTCAAGGAAAATCACCCCT...CCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CCA 90 bp | GGGTCACCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTTTGGAGTTAACTACTTaGGAAGGAACAGGGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSPPRRGDLGRALKGAATLELTT*EGTGVP Trigger: AGGGACCCCTGTTCCTTCCCAAGTAGTTAACTCCAA...AGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGGTGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CCA 90 bp | GATGGCCCAGGAGTCCACATTCCATATTTGCCCCTGCTCAGCTGGCCAGCAGCCGGGCACAGTTCTGGCTaGAGGCAAGGAACACTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DGPGVHIPYLPLLSWPAAGHSSG*RQGTLV Trigger: CACCAGTGTTCCTTGCCTCCAGCCAGAACTGTGCCC...GGCTGCTGGCCAGCTGAGCAGGGGCAAATATGGAATGTGGACTCCTGGGCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CCA 90 bp | AGTCCACATTCCATATTTGCCCCTGCTCAGCTGGCCAGCAGCCCAGGCAGACTGCGGCTCCGTGAGCTCTaGGCTCTGAGGAGGAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SPHSIFAPAQLASSPGRLRLREL*ALRRSY Trigger: ATAACTCCTCCTCAGAGCCCAGAGCTCACGGAGCCG...CAGTCTGCCTGGGCTGCTGGCCAGCTGAGCAGGGGCAAATATGGAATGTGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR TCA 90 bp | GCCTTCCGCTACCCACAGAAATGCCAGGACAAGGAACAGCACTCTGCATGTCACAGTCAGAGACAGGCGTaGGGGGTCTCATCTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: AFRYPQKCQDKEQHSACHSQRQA*GVSSGT Trigger: GGTCCCAGATGAGACCCCTCACGCCTGTCTCTGACT...GTGACATGCAGAGTGCTGTTCCTTGTCCTGGCATTTCTGTGGGTAGCGGAAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR GCA 90 bp | GCCTTCCGCTACCCACAGAAATGCCAGGACAAGGAACAGCACTCTGCATGTCACGGCAAGGAACACTGGTaGAGGGGCAAGGGGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: AFRYPQKCQDKEQHSACHGKEHW*RGKGQQ Trigger: CTGTTGCCCCTTGCCCCTGCACCAGTGTTCCTTGCC...GTGACATGCAGAGTGCTGTTCCTTGTCCTGGCATTTCTGTGGGTAGCGGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CCA 90 bp | GCCTTCCGCTACCCACAGAAATGCCAGGACAAGGAACAGCACTCTGCATGTCACTCTTGCTCAGTGTTCTaGGGCCCCCAGCAGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AFRYPQKCQDKEQHSACHSCSVF*GPQQGM Trigger: CATCCCCTGCTGGGGGCCCCAGAACACTGAGCAAGA...GTGACATGCAGAGTGCTGTTCCTTGTCCTGGCATTTCTGTGGGTAGCGGAAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR TCA 90 bp | AGTCCACATTCCATATTTGCCCCTGCTCAGCTGGCCAGCAGCCCAGGCAGACTGGTGAGCTCTGGGCTCTaGGGAGGAGTTATACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPHSIFAPAQLASSPGRLVSSGL*GGVIHR Trigger: TCTGTGTATAACTCCTCCTCAGAGCCCAGAGCTCAC...CAGTCTGCCTGGGCTGCTGGCCAGCTGAGCAGGGGCAAATATGGAATGTGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR GCA 90 bp | GCCTTCCGCTACCCACAGAAATGCCAGGACAAGGAACAGCACTCTGCATGTCACTTGCCCACCTCTGCCTaGCAGCCTGGGATCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AFRYPQKCQDKEQHSACHLPTSA*QPGIFL Trigger: CAAGAAGATCCCAGGCTGGCAGGCAGAGGTGGGCAA...GTGACATGCAGAGTGCTGTTCCTTGTCCTGGCATTTCTGTGGGTAGCGGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR GCA 90 bp | GATGGCCCAGGAGTCCACATTCCATATTTGCCCCTGCTCAGCTGGCCAGCAGCCGGCATCCTGGGAAGTTaGAAACATAGTTCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DGPGVHIPYLPLLSWPAAGILGS*KHSSSF Trigger: GAAGGAGGAACTATGTTTGCAACTTCCCAGGATGCC...GGCTGCTGGCCAGCTGAGCAGGGGCAAATATGGAATGTGGACTCCTGGGCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CAA 72 bp | CGAACCCCAGAGCCGAATGTGCACAAAGGCCTTGCTTaGTGGAAGCTGCACTCTGGCGGAGAGTTTAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTPEPNVHKGLA*WKLHSGGEFNQ Trigger: TTGGTTAAACTCTCCGCCAGAGTGCAGCTTCCACAAAGCAAGGCCTTTGTGCACATTCGGCTCTGGGGTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR TCA 90 bp | AGTCCACATTCCATATTTGCCCCTGCTCAGCTGGCCAGCAGCCCAGGCAGACTGCAGAAATCAGAGGGGTaGTTTTCCTTGACAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPHSIFAPAQLASSPGRLQKSEG*FSLTSH Trigger: GTGACTTGTCAAGGAAAATCACCCCTCTGATTTCTG...CAGTCTGCCTGGGCTGCTGGCCAGCTGAGCAGGGGCAAATATGGAATGTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR GCA 90 bp | AGCTCCCCACTTCAACAGCCCAGAGACCACATTTATTTTTGGAGAGGAACACACTGGTCATCACAGCCCTaGAGGAGGACCCTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPLQQPRDHIYFWRGTHWSSQP*RRTLRL Trigger: CAGCCTCAGGGTCCTCCTGCAGGGCTGTGATGACCA...GTGTGTTCCTCTCCAAAAATAAATGTGGTCTCTGGGCTGTTGAAGTGGGGAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CCA 90 bp | GTCTGGGCAGTTCCTAAACACATGTACATACAGAACTCGGCTACCACAGCAGCTGCCACAGGGATCATCTaGCAAAGGACAGGGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: VWAVPKHMYIQNSATTAAATGII*QRTGGL Trigger: CAGTCCCCCTGTCCTTTGCCAGATGATCCCTGTGGC...AGCTGCTGTGGTAGCCGAGTTCTGTATGTACATGTGTTTAGGAACTGCCCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CAA 72 bp | GAGAGGAACACACAGGTTCCATTCCTGAAGAGGCTTTaGAAGAAGCCCACAGGTGACGGATGCCACAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERNTQVPFLKRL*KKPTGDGCHRR Trigger: CCTTCTGTGGCATCCGTCACCTGTGGGCTTCTTCAAAAGCCTCTTCAGGAATGGAACCTGTGTGTTCCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR TCA 90 bp | GCCTTCCGCTACCCACAGAAATGCCAGGACAAGGAACAGCACTCTGCATGTCACTTGTGCAAGCAAGGCTaGCAGGAAACCAAGTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AFRYPQKCQDKEQHSACHLCKQG*QETKLV Trigger: CACTAACTTGGTTTCCTGTCAGCCTTGCTTGCACAA...GTGACATGCAGAGTGCTGTTCCTTGTCCTGGCATTTCTGTGGGTAGCGGAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR GCA 90 bp | AGCTCCCCACTTCAACAGCCCAGAGACCACATTTATTTTTGGAGAGGAACACACGGGCTTGATAGTCCCTaGAGGCAACTGGGTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPLQQPRDHIYFWRGTHGLDSP*RQLGRR Trigger: CCTCCTACCCAGTTGCCTGCAGGGACTATCAAGCCC...GTGTGTTCCTCTCCAAAAATAAATGTGGTCTCTGGGCTGTTGAAGTGGGGAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CAA 72 bp | GTGTTGGTGCTTAACACAGACAGGACATGGGGTCATTaGCTCTTAGCAGACAGATGGCCCAGGAGTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VLVLNTDRTWGH*LLADRWPRSPH Trigger: ATGTGGACTCCTGGGCCATCTGTCTGCTAAGAGCAAATGACCCCATGTCCTGTCTGTGTTAAGCACCAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR GCA 90 bp | TCCCTGTGGTCATTCAATCTAGCACGCAGTACAAAACCACAACAGAAGCCAACAGACCTTTCGCTGTCATaGCGCTTCCTCTCCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SLWSFNLARSTKPQQKPTDLSLS*RFLSRI Trigger: GATCCTGGAGAGGAAGCGGCATGACAGCGAAAGGTC...TGTTGGCTTCTGTTGTGGTTTTGTACTGCGTGCTAGATTGAATGACCACAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR GCA 90 bp | TCCCTGTGGTCATTCAATCTAGCACGCAGTACAAAACCACAACAGAAGCCAACAGCTCCCGGGGCTCTCTaGCAAAGTGATTCTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLWSFNLARSTKPQQKPTAPGAL*QSDSVQ Trigger: CTGAACAGAATCACTTTGGCAGAGAGCCCCGGGAGC...TGTTGGCTTCTGTTGTGGTTTTGTACTGCGTGCTAGATTGAATGACCACAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CCA 90 bp | CTGGCGGAGAGTTTAACCAACCAGTACAGACATTTCCTTTTCCCTGTGGTCATTGGGGAAGGTGTTCTGTaGCAAGACCAGCATCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LAESLTNQYRHFLFPVVIGEGVL*QDQHHS Trigger: ACTGTGATGCTGGTCTTGCCACAGAACACCTTCCCC...AATGACCACAGGGAAAAGGAAATGTCTGTACTGGTTGGTTAAACTCTCCGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CCA 90 bp | ATAGGAACTGTTTTCCAACTTAGTCTTTCAGTAGACAAATGTTGGGGGCTCTTTGGACAGGCAGCAGGCTaGGGGAAGGTGTTCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IGTVFQLSLSVDKCWGLFGQAAG*GKVFCG Trigger: GCCACAGAACACCTTCCCCCAGCCTGCTGCCTGTCC...AAAGAGCCCCCAACATTTGTCTACTGAAAGACTAAGTTGGAAAACAGTTCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CCA 90 bp | CTGGCGGAGAGTTTAACCAACCAGTACAGACATTTCCTTTTCCCTGTGGTCATTAGCCTGGGATCTTCTTaGTTGTCATGTGGCGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: LAESLTNQYRHFLFPVVISLGSS*LSCGDE Trigger: CTCGTCGCCACATGACAACCAAGAAGATCCCAGGCT...AATGACCACAGGGAAAAGGAAATGTCTGTACTGGTTGGTTAAACTCTCCGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CAA 72 bp | CTCCCCACTTCAACAGCCCAGAGACCACATTTATTTTaGGAGAGGAACACACAGGTTCCATTCCTGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPTSTAQRPHLF*ERNTQVPFLKR Trigger: CCTCTTCAGGAATGGAACCTGTGTGTTCCTCTCCAAAAATAAATGTGGTCTCTGGGCTGTTGAAGTGGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR TCA 90 bp | TACCACACAAAAATAGTCTCAGGCTGCCCAAACAGCACAATATACCTGTTATCACTCATCTGGGACCTCTaGCCCCAAGAGCTCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YHTKIVSGCPNSTIYLLSLIWDL*PQELMQ Trigger: CTGCATGAGCTCTTGGGGTCAGAGGTCCCAGATGAG...TGATAACAGGTATATTGTGCTGTTTGGGCAGCCTGAGACTATTTTTGTGTGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR TCA 90 bp | TACCACACAAAAATAGTCTCAGGCTGCCCAAACAGCACAATATACCTGTTATCACGGGAAAAGTCTACCTaGGGGGCACAGTTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YHTKIVSGCPNSTIYLLSREKST*GAQFWL Trigger: CAGCCAGAACTGTGCCCCTCAGGTAGACTTTTCCCG...TGATAACAGGTATATTGTGCTGTTTGGGCAGCCTGAGACTATTTTTGTGTGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR GCA 90 bp | CACACACAGACAAAGACAGTCAGAGTTCTAAAACTACAAAAGATATCAAACAGGGCCAAGCGTGTGTCCTaGAAGGCTTCGAGGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTQTKTVRVLKLQKISNRAKRVS*KASRWS Trigger: GGACCACCTCGAAGCCTTGCAGGACACACGCTTGGC...CCTGTTTGATATCTTTTGTAGTTTTAGAACTCTGACTGTCTTTGTCTGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CCA 90 bp | CACACACAGACAAAGACAGTCAGAGTTCTAAAACTACAAAAGATATCAAACAGGGGAGGCAAGGAACACTaGTGCAGGGGCAAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTQTKTVRVLKLQKISNRGGKEH*CRGKGQ Trigger: TTGCCCCTTGCCCCTGCACCAGTGTTCCTTGCCTCC...CCTGTTTGATATCTTTTGTAGTTTTAGAACTCTGACTGTCTTTGTCTGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CCA 90 bp | CTGGCGGAGAGTTTAACCAACCAGTACAGACATTTCCTTTTCCCTGTGGTCATTGGTCTTCCGGCATCCTaGGAAGTTGCAAACATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LAESLTNQYRHFLFPVVIGLPAS*EVANIV Trigger: AACTATGTTTGCAACTTCCCAGGATGCCGGAAGACC...AATGACCACAGGGAAAAGGAAATGTCTGTACTGGTTGGTTAAACTCTCCGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CAA 72 bp | CAGCCACTGCCATTTAATGATATGTTTCTCAGTGTTTaGTCCATAGTCAGAGAGGCATCCGAACCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPLPFNDMFLSV*SIVREASEPQS Trigger: GCTCTGGGGTTCGGATGCCTCTCTGACTATGGACAAAACACTGAGAAACATATCATTAAATGGCAGTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR GCA 90 bp | CACACACAGACAAAGACAGTCAGAGTTCTAAAACTACAAAAGATATCAAACAGGTCTGCTCCAGGACGCTaGATGTGGACCTTTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HTQTKTVRVLKLQKISNRSAPGR*MWTFRC Trigger: ACAGCGAAAGGTCCACATGCAGCGTCCTGGAGCAGA...CCTGTTTGATATCTTTTGTAGTTTTAGAACTCTGACTGTCTTTGTCTGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| 3UTR CAA 72 bp | GTAACATACAGAGTTTCTGCGTCTACATTCTTAGTGTaGGTGCTTAACACAGACAGGACATGGGGTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTYRVSASTFLV*VLNTDRTWGHL Trigger: CAAATGACCCCATGTCCTGTCTGTGTTAAGCACCAACACTAAGAATGTAGACGCAGAAACTCTGTATGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR TCA 90 bp | ATAGGAACTGTTTTCCAACTTAGTCTTTCAGTAGACAAATGTTGGGGGCTCTTTAGGTTTCAAAAAGGCTaGGAACAAGCCATTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IGTVFQLSLSVDKCWGLFRFQKG*EQAILS Trigger: GGACAGAATGGCTTGTTCTCAGCCTTTTTGAAACCT...AAAGAGCCCCCAACATTTGTCTACTGAAAGACTAAGTTGGAAAACAGTTCCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS TCA 90 bp | CGCTGTCATGCCGCTTCCTCTCCAGGATCGACTCACAAATGTCCATaGTGTCAGCCGCGCGCCCGTCGCCGGGGCCGGTGGAGCCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RCHAASSPGSTHKCP*CQPRARRRGRWSPA Trigger: CGCCGGGCTCCACCGGCCCCGGCGACGGGCGCGCGGCTGACATCATGGACATTTGTGAGTCGATCCTGGAGAGGAAGCGGCATGACAGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CAA 90 bp | CCACCACGCCGTGGGGATTTGGGGAGGGCCCTCAAGGGAGCAGCCACTCCCGGGGTGATTCTGTTCAGCTaGCCCACCTCTGCCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPRRGDLGRALKGAATPGVILFS*PTSACQ Trigger: CTGGCAGGCAGAGGTGGGCAAGCTGAACAGAATCAC...CCCGGGAGTGGCTGCTCCCTTGAGGGCCCTCCCCAAATCCCCACGGCGTGGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
||
| CDS TCA 90 bp | GTGGGGCCAGTTGGGAAGCGCGTAGGAGCAGGACTCTCCCCGGTGTaGCGGATCACACTGGTCATCACAGCCCTGCAGGAGGACCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VGPVGKRVGAGLSPV*RITLVITALQEDPE Trigger: CTCAGGGTCCTCCTGCAGGGCTGTGATGACCAGTGTGATCCGTCACACCGGGGAGAGTCCTGCTCCTACGCGCTTCCCAACTGGCCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020982.7 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS GCA 90 bp | TCAGCCAGAGGCCGGCAAGGGTTCGAGGATGCTCCCGGGGCTCTCTaGCAAAGTGATTCTGTTCAGCTTGCCCACCTCTGCCTGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SARGRQGFEDAPGAL*QSDSVQLAHLCLPA Trigger: GGCTGGCAGGCAGAGGTGGGCAAGCTGAACAGAATCACTTTGGCAGAGAGCCCCGGGAGCATCCTCGAACCCTTGCCGGCCTCTGGCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
||
| CDS TCA 90 bp | AGCAAACGCTCCTGTCCTTCTCCGCTGTCGGATGCTCGTTGCTCTTaGGTGGGGCCAGTTGGGAAGCGCGTAGGAGCAGGACTCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SKRSCPSPLSDARCS*VGPVGKRVGAGLSP Trigger: CGGGGAGAGTCCTGCTCCTACGCGCTTCCCAACTGGCCCCACTCAAGAGCAACGAGCATCCGACAGCGGAGAAGGACAGGAGCGTTTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020982.7 ENSMUST00000146894.8 |
||
| CDS GCA 90 bp | CAGGACTCTCCCCGGTGTGACGGATCACACTGGTCATCACAGCCCTaGAGGAGGACCCTGAGGCTGGCTCCAGTGGTTCCCTCTTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QDSPRCDGSHWSSQP*RRTLRLAPVVPSCS Trigger: TGAGCAAGAGGGAACCACTGGAGCCAGCCTCAGGGTCCTCCTGCAGGGCTGTGATGACCAGTGTGATCCGTCACACCGGGGAGAGTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020982.7 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS CCA 90 bp | TCCTTCTCCGCTGTCGGATGCTCGTTGCTCTTGAGTGGGGCCAGTTaGGAAGCGCGTAGGAGCAGGACTCTCCCCGGTGTGACGGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: SFSAVGCSLLLSGAS*EARRSRTLPGVTDH Trigger: GTGATCCGTCACACCGGGGAGAGTCCTGCTCCTACGCGCTTCCCAACTGGCCCCACTCAAGAGCAACGAGCATCCGACAGCGGAGAAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020982.7 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS GCA 90 bp | CCCGGGGCTCTCTGCCAAAGTGATTCTGTTCAGCTTGCCCACCTCTaGCTGCCAGCCTGGGATCTTCTTGGTTGTCATGTGGCGACGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGALCQSDSVQLAHL*LPAWDLLGCHVATS Trigger: GCTCGTCGCCACATGACAACCAAGAAGATCCCAGGCTGGCAGGCAGAGGTGGGCAAGCTGAACAGAATCACTTTGGCAGAGAGCCCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS GCA 90 bp | GGGCTCTCTGCCAAAGTGATTCTGTTCAGCTTGCCCACCTCTGCCTaGCAGCCTGGGATCTTCTTGGTTGTCATGTGGCGACGAGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLSAKVILFSLPTSA*QPGIFLVVMWRRAC Trigger: GCACGCTCGTCGCCACATGACAACCAAGAAGATCCCAGGCTGGCAGGCAGAGGTGGGCAAGCTGAACAGAATCACTTTGGCAGAGAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS CCA 90 bp | GAGCTTCCACAGCTTCGATGTCCGTCTGCTCCAGGACGCTGCATGTaGACCTTTCGCTGTCATGCCGCTTCCTCTCCAGGATCGACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ELPQLRCPSAPGRCM*TFRCHAASSPGSTH Trigger: GTGAGTCGATCCTGGAGAGGAAGCGGCATGACAGCGAAAGGTCCACATGCAGCGTCCTGGAGCAGACGGACATCGAAGCTGTGGAAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020982.7 ENSMUST00000139940.2 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS-3UTR CAA 90 bp | GATGGCCCAGGAGTCCACATTCCATATTTGCCCCTGCTCAGCTGGCCAGCAGCCCTGGGATCTTCTTGGTaGTCATGTGGCGACGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: DGPGVHIPYLPLLSWPAALGSSW*SCGDER Trigger: ACGCTCGTCGCCACATGACAACCAAGAAGATCCCAG...GGCTGCTGGCCAGCTGAGCAGGGGCAAATATGGAATGTGGACTCCTGGGCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS TCA 90 bp | GTGGCAAGACCAGCATCACAGTTCCCTGAGGCACAGGTGGGCCCATaGACACAGGCTGAGACATTGAAGCAGCTTGGGGTAGGATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VARPASQFPEAQVGP*TQAETLKQLGVGWA Trigger: AGCCCATCCTACCCCAAGCTGCTTCAATGTCTCAGCCTGTGTTCATGGGCCCACCTGTGCCTCAGGGAACTGTGATGCTGGTCTTGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS GCA 90 bp | AGACAAGAGCTTCCACAGCTTCGATGTCCGTCTGCTCCAGGACGCTaGATGTGGACCTTTCGCTGTCATGCCGCTTCCTCTCCAGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: RQELPQLRCPSAPGR*MWTFRCHAASSPGS Trigger: CGATCCTGGAGAGGAAGCGGCATGACAGCGAAAGGTCCACATGCAGCGTCCTGGAGCAGACGGACATCGAAGCTGTGGAAGCTCTTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020982.7 ENSMUST00000139940.2 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS CCA 90 bp | ACGAGTAAGCCATTTGCCAAGCGTGTGTCCTGCAAGGCTTCGAGGTaGTCCAGCAAACGCTCCTGTCCTTCTCCGCTGTCGGATGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: TSKPFAKRVSCKASR*SSKRSCPSPLSDAR Trigger: ACGAGCATCCGACAGCGGAGAAGGACAGGAGCGTTTGCTGGACCACCTCGAAGCCTTGCAGGACACACGCTTGGCAAATGGCTTACTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS CCA 90 bp | GGCAAGGGGCAACAGCTTGGTATTTCCAATGGCCATGACACTGGATaGACAGGCAGCAGGCTGGGGGAAGGTGTTCTGTGGCAAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GKGQQLGISNGHDTG*TGSRLGEGVLWQDQ Trigger: CTGGTCTTGCCACAGAACACCTTCCCCCAGCCTGCTGCCTGTCCATCCAGTGTCATGGCCATTGGAAATACCAAGCTGTTGCCCCTTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS TCA 90 bp | TCACCAGAGTCAGAGACAGGCGTGAGGGGTCTCATCTGGGACCTCTaGCCCCAAGAGCTCATGCAGACAAGAGCTTCCACAGCTTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SPESETGVRGLIWDL*PQELMQTRASTASM Trigger: CATCGAAGCTGTGGAAGCTCTTGTCTGCATGAGCTCTTGGGGTCAGAGGTCCCAGATGAGACCCCTCACGCCTGTCTCTGACTCTGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020982.7 ENSMUST00000139940.2 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS GCA 90 bp | CAAGAGCTCATGCAGACAAGAGCTTCCACAGCTTCGATGTCCGTCTaGTCCAGGACGCTGCATGTGGACCTTTCGCTGTCATGCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QELMQTRASTASMSV*SRTLHVDLSLSCRF Trigger: GAAGCGGCATGACAGCGAAAGGTCCACATGCAGCGTCCTGGAGCAGACGGACATCGAAGCTGTGGAAGCTCTTGTCTGCATGAGCTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020982.7 ENSMUST00000139940.2 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS CCA 90 bp | AGGTCTGAACAGCAGCGGGCCATCCTGTCTGTTGACCTTTGTCAGTaGGGAACGAACCACCGGACTTGTGCAAGCAAGGCTGACAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSEQQRAILSVDLCQ*GTNHRTCASKADRK Trigger: TTTCCTGTCAGCCTTGCTTGCACAAGTCCGGTGGTTCGTTCCCCACTGACAAAGGTCAACAGACAGGATGGCCCGCTGCTGTTCAGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS CCA 90 bp | TGCCAAAGTGATTCTGTTCAGCTTGCCCACCTCTGCCTGCCAGCCTaGGATCTTCTTGGTTGTCATGTGGCGACGAGCGTGCTTTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CQSDSVQLAHLCLPA*DLLGCHVATSVLCQ Trigger: CTGACAAAGCACGCTCGTCGCCACATGACAACCAAGAAGATCCCAGGCTGGCAGGCAGAGGTGGGCAAGCTGAACAGAATCACTTTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS TCA 90 bp | GCATCCTTTGGAGTTAACTACTTGGGAAGGAACAGGGGTCCCTGTTaGCGGCTCCGTGAGCTCTGGGCTCTGAGGAGGAGTTATACACAG | + |
|
Preference number: 5 (lower is better) Translates to: ASFGVNYLGRNRGPC*RLRELWALRRSYTQ Trigger: CTGTGTATAACTCCTCCTCAGAGCCCAGAGCTCACGGAGCCGTCAACAGGGACCCCTGTTCCTTCCCAAGTAGTTAACTCCAAAGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020982.7 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS GCA 90 bp | ATGTCCGTCTGCTCCAGGACGCTGCATGTGGACCTTTCGCTGTCATaGCGCTTCCTCTCCAGGATCGACTCACAAATGTCCATGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MSVCSRTLHVDLSLS*RFLSRIDSQMSMMS Trigger: TGACATCATGGACATTTGTGAGTCGATCCTGGAGAGGAAGCGGCATGACAGCGAAAGGTCCACATGCAGCGTCCTGGAGCAGACGGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS GCA 90 bp | GAAACCAAGTTAGTGACGAGTAAGCCATTTGCCAAGCGTGTGTCCTaGAAGGCTTCGAGGTGGTCCAGCAAACGCTCCTGTCCTTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ETKLVTSKPFAKRVS*KASRWSSKRSCPSP Trigger: CGGAGAAGGACAGGAGCGTTTGCTGGACCACCTCGAAGCCTTGCAGGACACACGCTTGGCAAATGGCTTACTCGTCACTAACTTGGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CAA 90 bp | AGTCCACATTCCATATTTGCCCCTGCTCAGCTGGCCAGCAGCCCAGGCAGACTGCACTTTCAGGATTCTTaGGTAAGCAGGTCTGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SPHSIFAPAQLASSPGRLHFQDS*VSRSEQ Trigger: CTGTTCAGACCTGCTTACCAAAGAATCCTGAAAGTG...CAGTCTGCCTGGGCTGCTGGCCAGCTGAGCAGGGGCAAATATGGAATGTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS TCA 90 bp | CCTTTGTCAGTGGGGAACGAACCACCGGACTTGTGCAAGCAAGGCTaGCAGGAAACCAAGTTAGTGACGAGTAAGCCATTTGCCAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PLSVGNEPPDLCKQG*QETKLVTSKPFAKR Trigger: ACGCTTGGCAAATGGCTTACTCGTCACTAACTTGGTTTCCTGTCAGCCTTGCTTGCACAAGTCCGGTGGTTCGTTCCCCACTGACAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS CCA 90 bp | AAAAAGGCTGAGAACAAGCCATTCTGTCCAGCCACAGGGATCATCTaGCAAAGGACAGGGGGACTGGATACAGGGACAGAAATCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KKAENKPFCPATGII*QRTGGLDTGTEIRG Trigger: CCCTCTGATTTCTGTCCCTGTATCCAGTCCCCCTGTCCTTTGCCAGATGATCCCTGTGGCTGGACAGAATGGCTTGTTCTCAGCCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CAA 90 bp | AGCTCCCCACTTCAACAGCCCAGAGACCACATTTATTTTTGGAGAGGAACACACTGGGGTAGGATGGGCTaGATAGTCCCTGCAGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSPLQQPRDHIYFWRGTHWGRMG*IVPAGN Trigger: GTTGCCTGCAGGGACTATCAAGCCCATCCTACCCCA...GTGTGTTCCTCTCCAAAAATAAATGTGGTCTCTGGGCTGTTGAAGTGGGGAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS TCA 90 bp | GAAGGAACAGGGGTCCCTGTTGACGGCTCCGTGAGCTCTGGGCTCTaGGGAGGAGTTATACACAGAGTTGAAAAAGAATGGAAGTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EGTGVPVDGSVSSGL*GGVIHRVEKEWKSF Trigger: AAAGGACTTCCATTCTTTTTCAACTCTGTGTATAACTCCTCCTCAGAGCCCAGAGCTCACGGAGCCGTCAACAGGGACCCCTGTTCCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020982.7 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS TCA 90 bp | CTTGATAGTCCCTGCAGGCAACTGGGTAGGAGGTTTCAAAAAGGCTaGGAACAAGCCATTCTGTCCAGCCACAGGGATCATCTGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LDSPCRQLGRRFQKG*EQAILSSHRDHLAK Trigger: CTTTGCCAGATGATCCCTGTGGCTGGACAGAATGGCTTGTTCTCAGCCTTTTTGAAACCTCCTACCCAGTTGCCTGCAGGGACTATCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CAA 90 bp | TCCCTGTGGTCATTCAATCTAGCACGCAGTACAAAACCACAACAGAAGCCAACACAGCCTGGGATCTTCTaGGTTGTCATGTGGCGACGA | + |
|
Preference number: 5 (lower is better) Translates to: SLWSFNLARSTKPQQKPTQPGIF*VVMWRR Trigger: TCGTCGCCACATGACAACCAAGAAGATCCCAGGCTG...TGTTGGCTTCTGTTGTGGTTTTGTACTGCGTGCTAGATTGAATGACCACAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CAA 90 bp | AAACCATTCTGTTTTTGTGATCACCTGGATGCAGAACACCCGCTCACGAGGCGTAAGAATGGAAGTCCTTaGGTAGATCAGGTGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KPFCFCDHLDAEHPLTRRKNGSP*VDQVQL Trigger: CAGCTGCACCTGATCTACCAAAGGACTTCCATTCTT...ACGCCTCGTGAGCGGGTGTTCTGCATCCAGGTGATCACAAAAACAGAATGGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CAA 90 bp | CACACACAGACAAAGACAGTCAGAGTTCTAAAACTACAAAAGATATCAAACAGGTCCAGTGGTTCCCTCTaGCTCAGTGTTCTGGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HTQTKTVRVLKLQKISNRSSGSL*LSVLGP Trigger: GGGCCCCAGAACACTGAGCAAGAGGGAACCACTGGA...CCTGTTTGATATCTTTTGTAGTTTTAGAACTCTGACTGTCTTTGTCTGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CAA 90 bp | TACCACACAAAAATAGTCTCAGGCTGCCCAAACAGCACAATATACCTGTTATCAGGGCCATCCTGTCTGTaGACCTTTGTCAGTGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: YHTKIVSGCPNSTIYLLSGPSCL*TFVSGE Trigger: TTCCCCACTGACAAAGGTCAACAGACAGGATGGCCC...TGATAACAGGTATATTGTGCTGTTTGGGCAGCCTGAGACTATTTTTGTGTGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CAA 90 bp | CTGGCGGAGAGTTTAACCAACCAGTACAGACATTTCCTTTTCCCTGTGGTCATTACAGTTCATCTGACCTaGCGAACTTCTTGTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LAESLTNQYRHFLFPVVITVHLT*RTSCHS Trigger: GCTGTGACAAGAAGTTCGCAAGGTCAGATGAACTGT...AATGACCACAGGGAAAAGGAAATGTCTGTACTGGTTGGTTAAACTCTCCGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS-3UTR CAA 90 bp | AGCTCCCCACTTCAACAGCCCAGAGACCACATTTATTTTTGGAGAGGAACACACGAGTTATACACAGAGTaGAAAAAGAATGGAAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSPLQQPRDHIYFWRGTHELYTE*KKNGSP Trigger: AGGACTTCCATTCTTTTTCAACTCTGTGTATAACTC...GTGTGTTCCTCTCCAAAAATAAATGTGGTCTCTGGGCTGTTGAAGTGGGGAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS TCA 72 bp | GCCGCTTCCTCTCCAGGATCGACTCACAAATGTCCATaGTGTCAGCCGCGCGCCCGTCGCCGGGGCCGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: AASSPGSTHKCP*CQPRARRRGRW Trigger: CCACCGGCCCCGGCGACGGGCGCGCGGCTGACATCATGGACATTTGTGAGTCGATCCTGGAGAGGAAGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS CCA 72 bp | GCTGTCGGATGCTCGTTGCTCTTGAGTGGGGCCAGTTaGGAAGCGCGTAGGAGCAGGACTCTCCCCGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AVGCSLLLSGAS*EARRSRTLPGV Trigger: CACACCGGGGAGAGTCCTGCTCCTACGCGCTTCCCAACTGGCCCCACTCAAGAGCAACGAGCATCCGACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020982.7 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS CAA 90 bp | CAGCAAACGCTCCTGTCCTTCTCCGCTGTCGGATGCTCGTTGCTCTaGAGTGGGGCCAGTTGGGAAGCGCGTAGGAGCAGGACTCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: QQTLLSFSAVGCSLL*SGASWEARRSRTLP Trigger: GGGGAGAGTCCTGCTCCTACGCGCTTCCCAACTGGCCCCACTCAAGAGCAACGAGCATCCGACAGCGGAGAAGGACAGGAGCGTTTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020982.7 ENSMUST00000146894.8 |
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| CDS TCA 72 bp | GTTGGGAAGCGCGTAGGAGCAGGACTCTCCCCGGTGTaGCGGATCACACTGGTCATCACAGCCCTGCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VGKRVGAGLSPV*RITLVITALQE Trigger: CTCCTGCAGGGCTGTGATGACCAGTGTGATCCGTCACACCGGGGAGAGTCCTGCTCCTACGCGCTTCCCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020982.7 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS GCA 72 bp | GGCCGGCAAGGGTTCGAGGATGCTCCCGGGGCTCTCTaGCAAAGTGATTCTGTTCAGCTTGCCCACCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GRQGFEDAPGAL*QSDSVQLAHLC Trigger: GCAGAGGTGGGCAAGCTGAACAGAATCACTTTGGCAGAGAGCCCCGGGAGCATCCTCGAACCCTTGCCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS TCA 72 bp | AGGGTTCGAGGATGCTCCCGGGGCTCTCTGCCAAAGTaGTTCTGTTCAGCTTGCCCACCTCTGCCTGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RVRGCSRGSLPK*FCSACPPLPAS Trigger: GCTGGCAGGCAGAGGTGGGCAAGCTGAACAGAATCACTTTGGCAGAGAGCCCCGGGAGCATCCTCGAACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS TCA 72 bp | GATCACACTGGTCATCACAGCCCTGCAGGAGGACCCTaGGGCTGGCTCCAGTGGTTCCCTCTTGCTCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: DHTGHHSPAGGP*GWLQWFPLAQC Trigger: ACACTGAGCAAGAGGGAACCACTGGAGCCAGCCTCAGGGTCCTCCTGCAGGGCTGTGATGACCAGTGTGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020982.7 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS TCA 72 bp | GGGCAAGGGGCAACAGCTTGGTATTTCCAATGGCCATaGCACTGGATGGACAGGCAGCAGGCTGGGGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GQGATAWYFQWP*HWMDRQQAGGR Trigger: CCTTCCCCCAGCCTGCTGCCTGTCCATCCAGTGTCATGGCCATTGGAAATACCAAGCTGTTGCCCCTTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS CCA 72 bp | CAGCTTCGATGTCCGTCTGCTCCAGGACGCTGCATGTaGACCTTTCGCTGTCATGCCGCTTCCTCTCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: QLRCPSAPGRCM*TFRCHAASSPG Trigger: TCCTGGAGAGGAAGCGGCATGACAGCGAAAGGTCCACATGCAGCGTCCTGGAGCAGACGGACATCGAAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020982.7 ENSMUST00000139940.2 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS CCA 72 bp | CCATTTGCCAAGCGTGTGTCCTGCAAGGCTTCGAGGTaGTCCAGCAAACGCTCCTGTCCTTCTCCGCTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PFAKRVSCKASR*SSKRSCPSPLS Trigger: CGACAGCGGAGAAGGACAGGAGCGTTTGCTGGACCACCTCGAAGCCTTGCAGGACACACGCTTGGCAAATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS CAA 90 bp | TGGCTGGAGGCAAGGAACACTGGTGCAGGGGCAAGGGGCAACAGCTaGGTATTTCCAATGGCCATGACACTGGATGGACAGGCAGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: WLEARNTGAGARGNS*VFPMAMTLDGQAAG Trigger: GCCTGCTGCCTGTCCATCCAGTGTCATGGCCATTGGAAATACCAAGCTGTTGCCCCTTGCCCCTGCACCAGTGTTCCTTGCCTCCAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS TCA 72 bp | CTTGGGAAGGAACAGGGGTCCCTGTTGACGGCTCCGTaGGCTCTGGGCTCTGAGGAGGAGTTATACACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGKEQGSLLTAP*ALGSEEELYTE Trigger: CTCTGTGTATAACTCCTCCTCAGAGCCCAGAGCTCACGGAGCCGTCAACAGGGACCCCTGTTCCTTCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020982.7 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS TCA 72 bp | GGAGTTAACTACTTGGGAAGGAACAGGGGTCCCTGTTaGCGGCTCCGTGAGCTCTGGGCTCTGAGGAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GVNYLGRNRGPC*RLRELWALRRS Trigger: ACTCCTCCTCAGAGCCCAGAGCTCACGGAGCCGTCAACAGGGACCCCTGTTCCTTCCCAAGTAGTTAACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020982.7 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS GCA 72 bp | CTTCCACAGCTTCGATGTCCGTCTGCTCCAGGACGCTaGATGTGGACCTTTCGCTGTCATGCCGCTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LPQLRCPSAPGR*MWTFRCHAASS Trigger: AGAGGAAGCGGCATGACAGCGAAAGGTCCACATGCAGCGTCCTGGAGCAGACGGACATCGAAGCTGTGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020982.7 ENSMUST00000139940.2 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS CCA 72 bp | CAGCAGCGGGCCATCCTGTCTGTTGACCTTTGTCAGTaGGGAACGAACCACCGGACTTGTGCAAGCAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QQRAILSVDLCQ*GTNHRTCASKA Trigger: AGCCTTGCTTGCACAAGTCCGGTGGTTCGTTCCCCACTGACAAAGGTCAACAGACAGGATGGCCCGCTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS CCA 72 bp | CCAATGGCCATGACACTGGATGGACAGGCAGCAGGCTaGGGGAAGGTGTTCTGTGGCAAGACCAGCATCACA | + |
|
Preference number: 6 (lower is better) Translates to: PMAMTLDGQAAG*GKVFCGKTSIT Trigger: TGTGATGCTGGTCTTGCCACAGAACACCTTCCCCCAGCCTGCTGCCTGTCCATCCAGTGTCATGGCCATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
||
| CDS TCA 72 bp | CCAGCATCACAGTTCCCTGAGGCACAGGTGGGCCCATaGACACAGGCTGAGACATTGAAGCAGCTTGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: PASQFPEAQVGP*TQAETLKQLGV Trigger: TACCCCAAGCTGCTTCAATGTCTCAGCCTGTGTTCATGGGCCCACCTGTGCCTCAGGGAACTGTGATGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
||
| CDS GCA 72 bp | TGCTCCAGGACGCTGCATGTGGACCTTTCGCTGTCATaGCGCTTCCTCTCCAGGATCGACTCACAAATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CSRTLHVDLSLS*RFLSRIDSQMS Trigger: GGACATTTGTGAGTCGATCCTGGAGAGGAAGCGGCATGACAGCGAAAGGTCCACATGCAGCGTCCTGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020982.7 ENSMUST00000139940.2 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS GCA 72 bp | GGGGTCTCATCTGGGACCTCTGACCCCAAGAGCTCATaGAGACAAGAGCTTCCACAGCTTCGATGTCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: GVSSGTSDPKSS*RQELPQLRCPS Trigger: AGACGGACATCGAAGCTGTGGAAGCTCTTGTCTGCATGAGCTCTTGGGGTCAGAGGTCCCAGATGAGACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020982.7 ENSMUST00000139940.2 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS GCA 72 bp | ATGCAGACAAGAGCTTCCACAGCTTCGATGTCCGTCTaGTCCAGGACGCTGCATGTGGACCTTTCGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: MQTRASTASMSV*SRTLHVDLSLS Trigger: TGACAGCGAAAGGTCCACATGCAGCGTCCTGGAGCAGACGGACATCGAAGCTGTGGAAGCTCTTGTCTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020982.7 ENSMUST00000139940.2 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS GCA 72 bp | GCCAAAGTGATTCTGTTCAGCTTGCCCACCTCTGCCTaGCAGCCTGGGATCTTCTTGGTTGTCATGTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: AKVILFSLPTSA*QPGIFLVVMWR Trigger: TCGCCACATGACAACCAAGAAGATCCCAGGCTGGCAGGCAGAGGTGGGCAAGCTGAACAGAATCACTTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS CCA 72 bp | AGGGCAGTGACCATGCATCCTTTGGAGTTAACTACTTaGGAAGGAACAGGGGTCCCTGTTGACGGCTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: RAVTMHPLELTT*EGTGVPVDGSV Trigger: CACGGAGCCGTCAACAGGGACCCCTGTTCCTTCCCAAGTAGTTAACTCCAAAGGATGCATGGTCACTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020982.7 ENSMUST00000144046.2 ENSMUST00000146894.8 |
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| CDS CCA 72 bp | CAACAGCTTGGTATTTCCAATGGCCATGACACTGGATaGACAGGCAGCAGGCTGGGGGAAGGTGTTCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: QQLGISNGHDTG*TGSRLGEGVLW Trigger: CCACAGAACACCTTCCCCCAGCCTGCTGCCTGTCCATCCAGTGTCATGGCCATTGGAAATACCAAGCTGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS CAA 72 bp | GCAAGGAACACTGGTGCAGGGGCAAGGGGCAACAGCTaGGTATTTCCAATGGCCATGACACTGGATGGACAG | + |
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Preference number: 6 (lower is better) Translates to: ARNTGAGARGNS*VFPMAMTLDGQ Trigger: CTGTCCATCCAGTGTCATGGCCATTGGAAATACCAAGCTGTTGCCCCTTGCCCCTGCACCAGTGTTCCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS CCA 72 bp | GAGAACAAGCCATTCTGTCCAGCCACAGGGATCATCTaGCAAAGGACAGGGGGACTGGATACAGGGACAGAA | + |
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Preference number: 6 (lower is better) Translates to: ENKPFCPATGII*QRTGGLDTGTE Trigger: TTCTGTCCCTGTATCCAGTCCCCCTGTCCTTTGCCAGATGATCCCTGTGGCTGGACAGAATGGCTTGTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS TCA 72 bp | CCCTGCAGGCAACTGGGTAGGAGGTTTCAAAAAGGCTaGGAACAAGCCATTCTGTCCAGCCACAGGGATCAT | + |
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Preference number: 6 (lower is better) Translates to: PCRQLGRRFQKG*EQAILSSHRDH Trigger: ATGATCCCTGTGGCTGGACAGAATGGCTTGTTCTCAGCCTTTTTGAAACCTCCTACCCAGTTGCCTGCAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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| CDS TCA 72 bp | GTGGGGAACGAACCACCGGACTTGTGCAAGCAAGGCTaGCAGGAAACCAAGTTAGTGACGAGTAAGCCATTT | + |
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Preference number: 6 (lower is better) Translates to: VGNEPPDLCKQG*QETKLVTSKPF Trigger: AAATGGCTTACTCGTCACTAACTTGGTTTCCTGTCAGCCTTGCTTGCACAAGTCCGGTGGTTCGTTCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020982.7 |
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