Pregenerated sensors for KLF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054191Ensembl transcript IDs: ENSMUST00000067060.10, ENSMUST00000239392.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTCCCTGAGGACATGTGAGGTTTGTCCTGAAGGCTCCTTTGTATaGTCTTCTGGTCAGTTTTTGATCTGGGTAGGACTATATAATGGC | + |
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Preference number: 1 (lower is better) Translates to: GSLRTCEVCPEGSFV*SSGQFLIWVGLYNG Trigger: GCCATTATATAGTCCTACCCAGATCAAAAACTGACCAGAAGACCATACAAAGGAGCCTTCAGGACAAACCTCACATGTCCTCAGGGAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR-3UTR GCA 90 bp | GTAACGACAACAATCCTAGCAGATGGGCACAGTGTGAAGCTCCCTTCTAGATCTTCACCCCAGTCCATCTaGGTCCAGGACACAGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: VTTTILADGHSVKLPSRSSPQSI*VQDTGS Trigger: TGACCCTGTGTCCTGGACGCAGATGGACTGGGGTGA...AGATCTAGAAGGGAGCTTCACACTGTGCCCATCTGCTAGGATTGTTGTCGTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGTCTATATTGCTGGGTCTGTGGGGCCATGTGTGGGGCTCCCTGAGGACATGTTGGGATACGGTCCTTaGATCCACTCTTATTTCATC | + |
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Preference number: 2 (lower is better) Translates to: VVYIAGSVGPCVGLPEDMLGYGP*IHSYFI Trigger: GATGAAATAAGAGTGGATCCAAGGACCGTATCCCAA...CATGTCCTCAGGGAGCCCCACACATGGCCCCACAGACCCAGCAATATAGACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGTCTAGGGGTCCATTTGAGTTGATTTATCTGGTGGTCTATATTGCTGGGCTGTGGGGCCATGTGTaGGGCTCCCTGAGGACATGT | + |
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Preference number: 2 (lower is better) Translates to: LWSRGPFELIYLVVYIAGLWGHV*GSLRTC Trigger: ACATGTCCTCAGGGAGCCCCACACATGGCCCCACAG...CCCAGCAATATAGACCACCAGATAAATCAACTCAAATGGACCCCTAGACCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR-3UTR CCA 90 bp | TCTATATTGCTGGGTCTGTGGGGCCATGTGTGGGGCTCCCTGAGGACATGTGAGTTGGGATACGGTCCTTaGATCCACTCTTATTTCATC | + |
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Preference number: 2 (lower is better) Translates to: SILLGLWGHVWGSLRTCELGYGP*IHSYFI Trigger: GATGAAATAAGAGTGGATCCAAGGACCGTATCCCAA...CTCACATGTCCTCAGGGAGCCCCACACATGGCCCCACAGACCCAGCAATATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGGGTCTGTGGGGCCATGTGTGGGGCTCCCTGAGGACATGTGAGGTTTGTCTTTGTATGGTCTTCTaGTCAGTTTTTGATCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: LLGLWGHVWGSLRTCEVCLCMVF*SVFDLG Trigger: ACCCAGATCAAAAACTGACCAGAAGACCATACAAAG...ACAAACCTCACATGTCCTCAGGGAGCCCCACACATGGCCCCACAGACCCAGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR-3UTR CCA 90 bp | TCTATATTGCTGGGTCTGTGGGGCCATGTGTGGGGCTCCCTGAGGACATGTGAGGGTCAGTTTTTGATCTaGGTAGGACTATATAATGGC | + |
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Preference number: 2 (lower is better) Translates to: SILLGLWGHVWGSLRTCEGQFLI*VGLYNG Trigger: GCCATTATATAGTCCTACCCAGATCAAAAACTGACC...CTCACATGTCCTCAGGGAGCCCCACACATGGCCCCACAGACCCAGCAATATAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGTAACGACAACAATCCTAGCAGATGGGCACAGTGTGAAGCTCCCTTCTAGAGGTGGTCTATATTGCTaGGTCTGTGGGGCCATGTGT | + |
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Preference number: 2 (lower is better) Translates to: IVTTTILADGHSVKLPSRGGLYC*VCGAMC Trigger: ACACATGGCCCCACAGACCCAGCAATATAGACCACC...TCTAGAAGGGAGCTTCACACTGTGCCCATCTGCTAGGATTGTTGTCGTTACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGATTTATCTGGTGGTCTATATTGCTGGGTCTGTGGGGCCATGTGTGGGGCTGAAGGCTCCTTTGTATaGTCTTCTGGTCAGTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: VDLSGGLYCWVCGAMCGAEGSFV*SSGQFL Trigger: CAAAAACTGACCAGAAGACCATACAAAGGAGCCTTC...AGCCCCACACATGGCCCCACAGACCCAGCAATATAGACCACCAGATAAATCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR-3UTR CCA 90 bp | GTAACGACAACAATCCTAGCAGATGGGCACAGTGTGAAGCTCCCTTCTAGATCTGGTCAGTTTTTGATCTaGGTAGGACTATATAATGGC | + |
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Preference number: 2 (lower is better) Translates to: VTTTILADGHSVKLPSRSGQFLI*VGLYNG Trigger: GCCATTATATAGTCCTACCCAGATCAAAAACTGACC...AGATCTAGAAGGGAGCTTCACACTGTGCCCATCTGCTAGGATTGTTGTCGTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGTAACGACAACAATCCTAGCAGATGGGCACAGTGTGAAGCTCCCTTCTAGAGAAGGCTCCTTTGTATaGTCTTCTGGTCAGTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: IVTTTILADGHSVKLPSREGSFV*SSGQFL Trigger: CAAAAACTGACCAGAAGACCATACAAAGGAGCCTTC...TCTAGAAGGGAGCTTCACACTGTGCCCATCTGCTAGGATTGTTGTCGTTACTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR TCA 72 bp | TATTGCTGGGTCTGTGGGGCCATGTGTGGGGCTCCCTaGGGACATGTGAGGTTTGTCCTGAAGGCTCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: YCWVCGAMCGAP*GHVRFVLKAPL Trigger: CAAAGGAGCCTTCAGGACAAACCTCACATGTCCTCAGGGAGCCCCACACATGGCCCCACAGACCCAGCAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR-3UTR CAA 90 bp | GTAACGACAACAATCCTAGCAGATGGGCACAGTGTGAAGCTCCCTTCTAGATCTATCTGGTGGTCTATATaGCTGGGTCTGTGGGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: VTTTILADGHSVKLPSRSIWWSI*LGLWGH Trigger: ATGGCCCCACAGACCCAGCAATATAGACCACCAGAT...AGATCTAGAAGGGAGCTTCACACTGTGCCCATCTGCTAGGATTGTTGTCGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR TCA 72 bp | CAGGGTCACTCCTCTGGTCTAGGGGTCCATTTGAGTTaGTTTATCTGGTGGTCTATATTGCTGGGTCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: QGHSSGLGVHLS*FIWWSILLGLW Trigger: CCACAGACCCAGCAATATAGACCACCAGATAAATCAACTCAAATGGACCCCTAGACCAGAGGAGTGACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR CCA 72 bp | GACTATATAATGGCCCATCTTTTGGGATACGGTCCTTaGATCCACTCTTATTTCATCCCCAGTCCTTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: DYIMAHLLGYGP*IHSYFIPSPCA Trigger: TGCACAAGGACTGGGGATGAAATAAGAGTGGATCCAAGGACCGTATCCCAAAAGATGGGCCATTATATAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR CCA 72 bp | AGGACATGTGAGGTTTGTCCTGAAGGCTCCTTTGTATaGTCTTCTGGTCAGTTTTTGATCTGGGTAGGACTA | + |
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Preference number: 3 (lower is better) Translates to: RTCEVCPEGSFV*SSGQFLIWVGL Trigger: TAGTCCTACCCAGATCAAAAACTGACCAGAAGACCATACAAAGGAGCCTTCAGGACAAACCTCACATGTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| 3UTR CCA 72 bp | GGCTCCTTTGTATGGTCTTCTGGTCAGTTTTTGATCTaGGTAGGACTATATAATGGCCCATCTTTTGGGATA | + |
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Preference number: 3 (lower is better) Translates to: GSFVWSSGQFLI*VGLYNGPSFGI Trigger: TATCCCAAAAGATGGGCCATTATATAGTCCTACCCAGATCAAAAACTGACCAGAAGACCATACAAAGGAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | TTGCTGGGTCTGTGGGGCCATGTGTGGGGCTCCCTGAGGACATGTGAGGTTTGTTGGCCCCGAGTTCTGTaGCCACAGTCCCAGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LLGLWGHVWGSLRTCEVCWPRVL*PQSQVP Trigger: TGGGACCTGGGACTGTGGCCACAGAACTCGGGGCCA...ACAAACCTCACATGTCCTCAGGGAGCCCCACACATGGCCCCACAGACCCAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | GTGGTCTATATTGCTGGGTCTGTGGGGCCATGTGTGGGGCTCCCTGAGGACATGGGCTGGTGTCCACCCTaGACCTCAGGCCTCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VVYIAGSVGPCVGLPEDMGWCPP*TSGLLS Trigger: AGAGAGGAGGCCTGAGGTCCAGGGTGGACACCAGCC...CATGTCCTCAGGGAGCCCCACACATGGCCCCACAGACCCAGCAATATAGACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | TTGCTGGGTCTGTGGGGCCATGTGTGGGGCTCCCTGAGGACATGTGAGGTTTGTAGCTGGAAGTGGCCTTaGTACTGTGGCGCGGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: LLGLWGHVWGSLRTCEVCSWKWP*YCGAGY Trigger: GTACCCCGCGCCACAGTACCAAGGCCACTTCCAGCT...ACAAACCTCACATGTCCTCAGGGAGCCCCACACATGGCCCCACAGACCCAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | ATAGTAACGACAACAATCCTAGCAGATGGGCACAGTGTGAAGCTCCCTTCTAGACCACTGGCCCCACGCTaGGCGCCAGGGCACAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: IVTTTILADGHSVKLPSRPLAPR*APGHRS Trigger: GGACCTGTGCCCTGGCGCCCAGCGTGGGGCCAGTGG...TCTAGAAGGGAGCTTCACACTGTGCCCATCTGCTAGGATTGTTGTCGTTACTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | TCTATATTGCTGGGTCTGTGGGGCCATGTGTGGGGCTCCCTGAGGACATGTGAGCGAAAGAGCTGGAAGTaGCCTTGGTACTGTGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: SILLGLWGHVWGSLRTCERKSWK*PWYCGA Trigger: CGCGCCACAGTACCAAGGCCACTTCCAGCTCTTTCG...CTCACATGTCCTCAGGGAGCCCCACACATGGCCCCACAGACCCAGCAATATAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | GTGGTCTATATTGCTGGGTCTGTGGGGCCATGTGTGGGGCTCCCTGAGGACATGAGCCCGCGAAAGAGCTaGAAGTGGCCTTGGTACTGT | + |
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Preference number: 4 (lower is better) Translates to: VVYIAGSVGPCVGLPEDMSPRKS*KWPWYC Trigger: ACAGTACCAAGGCCACTTCCAGCTCTTTCGCGGGCT...CATGTCCTCAGGGAGCCCCACACATGGCCCCACAGACCCAGCAATATAGACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | TTGCTGGGTCTGTGGGGCCATGTGTGGGGCTCCCTGAGGACATGTGAGGTTTGTAGCCCGCGAAAGAGCTaGAAGTGGCCTTGGTACTGT | + |
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Preference number: 4 (lower is better) Translates to: LLGLWGHVWGSLRTCEVCSPRKS*KWPWYC Trigger: ACAGTACCAAGGCCACTTCCAGCTCTTTCGCGGGCT...ACAAACCTCACATGTCCTCAGGGAGCCCCACACATGGCCCCACAGACCCAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR TCA 90 bp | TCCCTTCTAGATCTTAGGAAATCTCACCCCAGTCCATCTGCGTCCAGGACACAGCAGACCGCCACCACTTaGGGAAGTCCTCCTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SLLDLRKSHPSPSASRTQQTATT*GSPPGC Trigger: ACACCCAGGAGGACTTCCTCAAGTGGTGGCGGTCTG...CTGTGTCCTGGACGCAGATGGACTGGGGTGAGATTTCCTAAGATCTAGAAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | GGACATGTGAGGTTTGTCCTGAAGGCTCCTTTGTATGGTCTTCTGGTCAGTTTTGTGGCCTTGGTACTGTaGCGCGGGGTACAGCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GHVRFVLKAPLYGLLVSFVALVL*RGVQRG Trigger: CCCGCGCTGTACCCCGCGCCACAGTACCAAGGCCAC...AAAACTGACCAGAAGACCATACAAAGGAGCCTTCAGGACAAACCTCACATGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | TTTGAGTTGATTTATCTGGTGGTCTATATTGCTGGGTCTGTGGGGCCATGTGTGGTGGCCTTGGTACTGTaGCGCGGGGTACAGCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: FELIYLVVYIAGSVGPCVVALVL*RGVQRG Trigger: CCCGCGCTGTACCCCGCGCCACAGTACCAAGGCCAC...CACACATGGCCCCACAGACCCAGCAATATAGACCACCAGATAAATCAACTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR TCA 90 bp | GGACATGTGAGGTTTGTCCTGAAGGCTCCTTTGTATGGTCTTCTGGTCAGTTTTTCGGAGTACGAGGGCTaGGCCTTGGGAGCGAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: GHVRFVLKAPLYGLLVSFSEYEG*ALGASP Trigger: GGGACTCGCTCCCAAGGCTCAGCCCTCGTACTCCGA...AAAACTGACCAGAAGACCATACAAAGGAGCCTTCAGGACAAACCTCACATGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR TCA 90 bp | CTCTGGTCTAGGGGTCCATTTGAGTTGATTTATCTGGTGGTCTATATTGCTGGGTCGGAGTACGAGGGCTaGGCCTTGGGAGCGAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LWSRGPFELIYLVVYIAGSEYEG*ALGASP Trigger: GGGACTCGCTCCCAAGGCTCAGCCCTCGTACTCCGA...CCCAGCAATATAGACCACCAGATAAATCAACTCAAATGGACCCCTAGACCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR GCA 90 bp | GTAACGACAACAATCCTAGCAGATGGGCACAGTGTGAAGCTCCCTTCTAGATCTTGCGCCCAGCTTGTGTaGTCCTCGGAGCCCAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: VTTTILADGHSVKLPSRSCAQLV*SSEPKG Trigger: GCCTTTGGGCTCCGAGGAGCACACAAGCTGGGCGCA...AGATCTAGAAGGGAGCTTCACACTGTGCCCATCTGCTAGGATTGTTGTCGTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | GTTGATTTATCTGGTGGTCTATATTGCTGGGTCTGTGGGGCCATGTGTGGGGCTCGAAAGAGCTGGAAGTaGCCTTGGTACTGTGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: VDLSGGLYCWVCGAMCGARKSWK*PWYCGA Trigger: CGCGCCACAGTACCAAGGCCACTTCCAGCTCTTTCG...AGCCCCACACATGGCCCCACAGACCCAGCAATATAGACCACCAGATAAATCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | GTTGATTTATCTGGTGGTCTATATTGCTGGGTCTGTGGGGCCATGTGTGGGGCTTTGAGGAAGTCCTCCTaGGTGTCCAGGAACTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VDLSGGLYCWVCGAMCGALRKSS*VSRNCP Trigger: GGGACAGTTCCTGGACACCCAGGAGGACTTCCTCAA...AGCCCCACACATGGCCCCACAGACCCAGCAATATAGACCACCAGATAAATCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | TCTATATTGCTGGGTCTGTGGGGCCATGTGTGGGGCTCCCTGAGGACATGTGAGGGGAGACTCGGAACCTaGAAAGTTTGTAAGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: SILLGLWGHVWGSLRTCEGRLGT*KVCKEK Trigger: CTTTTCCTTACAAACTTTCCAGGTTCCGAGTCTCCC...CTCACATGTCCTCAGGGAGCCCCACACATGGCCCCACAGACCCAGCAATATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | GGACATGTGAGGTTTGTCCTGAAGGCTCCTTTGTATGGTCTTCTGGTCAGTTTTAGCTGGAAGTGGCCTTaGTACTGTGGCGCGGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: GHVRFVLKAPLYGLLVSFSWKWP*YCGAGY Trigger: GTACCCCGCGCCACAGTACCAAGGCCACTTCCAGCT...AAAACTGACCAGAAGACCATACAAAGGAGCCTTCAGGACAAACCTCACATGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | ATAGTAACGACAACAATCCTAGCAGATGGGCACAGTGTGAAGCTCCCTTCTAGATTGAGGAAGTCCTCCTaGGTGTCCAGGAACTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: IVTTTILADGHSVKLPSRLRKSS*VSRNCP Trigger: GGGACAGTTCCTGGACACCCAGGAGGACTTCCTCAA...TCTAGAAGGGAGCTTCACACTGTGCCCATCTGCTAGGATTGTTGTCGTTACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR GCA 90 bp | GGTTTTATATGGGAAATTTTTATAGTAACGACAACAATCCTAGCAGATGGGCACTGCGCCCAGCTTGTGTaGTCCTCGGAGCCCAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: GFIWEIFIVTTTILADGHCAQLV*SSEPKG Trigger: GCCTTTGGGCTCCGAGGAGCACACAAGCTGGGCGCA...GTGCCCATCTGCTAGGATTGTTGTCGTTACTATAAAAATTTCCCATATAAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | TATATGGGAAATTTTTATAGTAACGACAACAATCCTAGCAGATGGGCACAGTGTTGGCCCCGAGTTCTGTaGCCACAGTCCCAGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: YMGNFYSNDNNPSRWAQCWPRVL*PQSQVP Trigger: TGGGACCTGGGACTGTGGCCACAGAACTCGGGGCCA...ACACTGTGCCCATCTGCTAGGATTGTTGTCGTTACTATAAAAATTTCCCATATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR TCA 90 bp | GGTTTTATATGGGAAATTTTTATAGTAACGACAACAATCCTAGCAGATGGGCACCAGACCGCCACCACTTaGGGAAGTCCTCCTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GFIWEIFIVTTTILADGHQTATT*GSPPGC Trigger: ACACCCAGGAGGACTTCCTCAAGTGGTGGCGGTCTG...GTGCCCATCTGCTAGGATTGTTGTCGTTACTATAAAAATTTCCCATATAAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239392.2 |
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| CDS-3UTR CCA 90 bp | TATATGGGAAATTTTTATAGTAACGACAACAATCCTAGCAGATGGGCACAGTGTGGGAGACTCGGAACCTaGAAAGTTTGTAAGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: YMGNFYSNDNNPSRWAQCGRLGT*KVCKEK Trigger: CTTTTCCTTACAAACTTTCCAGGTTCCGAGTCTCCC...ACACTGTGCCCATCTGCTAGGATTGTTGTCGTTACTATAAAAATTTCCCATATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS GCA 90 bp | TGGGCCACCCGCATAGGCGCCCAGAGACTCAGGCGGCTCGAACTGTaGCACTGGCCCCACGCTGGGCGCCAGGGCACAGGTCCGGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: WATRIGAQRLRRLEL*HWPHAGRQGTGPGS Trigger: ACTTCCCGGACCTGTGCCCTGGCGCCCAGCGTGGGGCCAGTGGCACAGTTCGAGCCGCCTGAGTCTCTGGGCGCCTATGCGGGTGGCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 90 bp | CGCCCAGAGACTCAGGCGGCTCGAACTGTGCCACTGGCCCCACGCTaGGCGCCAGGGCACAGGTCCGGGAAGTGCCGGGAGACTCGGAAC | + |
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Preference number: 5 (lower is better) Translates to: RPETQAARTVPLAPR*APGHRSGKCRETRN Trigger: GTTCCGAGTCTCCCGGCACTTCCCGGACCTGTGCCCTGGCGCCCAGCGTGGGGCCAGTGGCACAGTTCGAGCCGCCTGAGTCTCTGGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS GCA 90 bp | GGTTCAGGGGCTGGGGGTCTCGGAGTCGGGTGCGCCCAGCTTGTGTaGTCCTCGGAGCCCAAAGGCCCAGTCACCAACCCTGGGCCACCC | + |
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Preference number: 5 (lower is better) Translates to: GSGAGGLGVGCAQLV*SSEPKGPVTNPGPP Trigger: GGGTGGCCCAGGGTTGGTGACTGGGCCTTTGGGCTCCGAGGAGCACACAAGCTGGGCGCACCCGACTCCGAGACCCCCAGCCCCTGAACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 90 bp | GGCGCCGTGGGACCAGCAGAAGGCGCCGCGAGCCCGCGAAAGAGCTaGAAGTGGCCTTGGTACTGTGGCGCGGGGTACAGCGCGGGGTAT | + |
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Preference number: 5 (lower is better) Translates to: GAVGPAEGAASPRKS*KWPWYCGAGYSAGY Trigger: ATACCCCGCGCTGTACCCCGCGCCACAGTACCAAGGCCACTTCCAGCTCTTTCGCGGGCTCGCGGCGCCTTCTGCTGGTCCCACGGCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS GCA 90 bp | CCCGCAGCCTTCGTGCCCGCACGTATGTGCCGCCTGCCTCTTAGGTaGCAAAGTTCGCCGGCTGCGTTTGGGCGGCGCAGTTCCCGGGGA | + |
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Preference number: 5 (lower is better) Translates to: PAAFVPARMCRLPLR*QSSPAAFGRRSSRG Trigger: TCCCCGGGAACTGCGCCGCCCAAACGCAGCCGGCGAACTTTGGCACCTAAGAGGCAGGCGGCACATACGTGCGGGCACGAAGGCTGCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 90 bp | AGGCGCCGCGAGCCCGCGAAAGAGCTGGAAGTGGCCTTGGTACTGTaGCGCGGGGTACAGCGCGGGGTATCCCGACAGCAGCCCATAGGG | + |
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Preference number: 5 (lower is better) Translates to: RRREPAKELEVALVL*RGVQRGVSRQQPIG Trigger: CCCTATGGGCTGCTGTCGGGATACCCCGCGCTGTACCCCGCGCCACAGTACCAAGGCCACTTCCAGCTCTTTCGCGGGCTCGCGGCGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 90 bp | CCAGCAGAAGGCGCCGCGAGCCCGCGAAAGAGCTGGAAGTGGCCTTaGTACTGTGGCGCGGGGTACAGCGCGGGGTATCCCGACAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PAEGAASPRKSWKWP*YCGAGYSAGYPDSS Trigger: GCTGCTGTCGGGATACCCCGCGCTGTACCCCGCGCCACAGTACCAAGGCCACTTCCAGCTCTTTCGCGGGCTCGCGGCGCCTTCTGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 90 bp | GTGGGACCAGCAGAAGGCGCCGCGAGCCCGCGAAAGAGCTGGAAGTaGCCTTGGTACTGTGGCGCGGGGTACAGCGCGGGGTATCCCGAC | + |
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Preference number: 5 (lower is better) Translates to: VGPAEGAASPRKSWK*PWYCGAGYSAGYPD Trigger: GTCGGGATACCCCGCGCTGTACCCCGCGCCACAGTACCAAGGCCACTTCCAGCTCTTTCGCGGGCTCGCGGCGCCTTCTGCTGGTCCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 90 bp | GCGGCGCAGTTCCCGGGGACAAGCCTGCGTCTCCGGCGATCGCAGTaGCCCCGAGTTCTGTGGCCACAGTCCCAGGTCCCAGACAATTCA | + |
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Preference number: 5 (lower is better) Translates to: AAQFPGTSLRLRRSQ*PRVLWPQSQVPDNS Trigger: TGAATTGTCTGGGACCTGGGACTGTGGCCACAGAACTCGGGGCCACTGCGATCGCCGGAGACGCAGGCTTGTCCCCGGGAACTGCGCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 90 bp | CCACAGTCCCAGGTCCCAGACAATTCAAGAAGGAAGGGGGCGCCGTaGGACCAGCAGAAGGCGCCGCGAGCCCGCGAAAGAGCTGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: PQSQVPDNSRRKGAP*DQQKAPRARERAGS Trigger: ACTTCCAGCTCTTTCGCGGGCTCGCGGCGCCTTCTGCTGGTCCCACGGCGCCCCCTTCCTTCTTGAATTGTCTGGGACCTGGGACTGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CAA 90 bp | TTGCTGGGTCTGTGGGGCCATGTGTGGGGCTCCCTGAGGACATGTGAGGTTTGTTCAGACCGCCACCACTaGAGGAAGTCCTCCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: LLGLWGHVWGSLRTCEVCSDRHH*RKSSWV Trigger: CACCCAGGAGGACTTCCTCAAGTGGTGGCGGTCTGA...ACAAACCTCACATGTCCTCAGGGAGCCCCACACATGGCCCCACAGACCCAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 90 bp | AAATCCTGCGTCTCCTCAGACCGCCACCACTTGAGGAAGTCCTCCTaGGTGTCCAGGAACTGTCCCAGGGTGGTGAGTGTACTGATGGAG | + |
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Preference number: 5 (lower is better) Translates to: KSCVSSDRHHLRKSS*VSRNCPRVVSVLME Trigger: CTCCATCAGTACACTCACCACCCTGGGACAGTTCCTGGACACCCAGGAGGACTTCCTCAAGTGGTGGCGGTCTGAGGAGACGCAGGATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CAA 90 bp | GTTGATTTATCTGGTGGTCTATATTGCTGGGTCTGTGGGGCCATGTGTGGGGCTTCAGACCGCCACCACTaGAGGAAGTCCTCCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: VDLSGGLYCWVCGAMCGASDRHH*RKSSWV Trigger: CACCCAGGAGGACTTCCTCAAGTGGTGGCGGTCTGA...AGCCCCACACATGGCCCCACAGACCCAGCAATATAGACCACCAGATAAATCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS-3UTR CAA 90 bp | GGACATGTGAGGTTTGTCCTGAAGGCTCCTTTGTATGGTCTTCTGGTCAGTTTTGAGCTGGAAGTGGCCTaGGTACTGTGGCGCGGGGTA | + |
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Preference number: 5 (lower is better) Translates to: GHVRFVLKAPLYGLLVSFELEVA*VLWRGV Trigger: TACCCCGCGCCACAGTACCAAGGCCACTTCCAGCTC...AAAACTGACCAGAAGACCATACAAAGGAGCCTTCAGGACAAACCTCACATGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS TCA 72 bp | CCTACGGAGCCCGCTCGCGAGTCGGAGTACGAGGGCTaGGCCTTGGGAGCGAGTCCCGGGGCCAGGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PTEPARESEYEG*ALGASPGARAG Trigger: CCCTGCCCTGGCCCCGGGACTCGCTCCCAAGGCTCAGCCCTCGTACTCCGACTCGCGAGCGGGCTCCGTAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 72 bp | ACTCAGGCGGCTCGAACTGTGCCACTGGCCCCACGCTaGGCGCCAGGGCACAGGTCCGGGAAGTGCCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: TQAARTVPLAPR*APGHRSGKCRE Trigger: CTCCCGGCACTTCCCGGACCTGTGCCCTGGCGCCCAGCGTGGGGCCAGTGGCACAGTTCGAGCCGCCTGAGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 72 bp | GGCGCCGCGAGCCCGCGAAAGAGCTGGAAGTGGCCTTaGTACTGTGGCGCGGGGTACAGCGCGGGGTATCCC | + |
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Preference number: 6 (lower is better) Translates to: GAASPRKSWKWP*YCGAGYSAGYP Trigger: GGGATACCCCGCGCTGTACCCCGCGCCACAGTACCAAGGCCACTTCCAGCTCTTTCGCGGGCTCGCGGCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 72 bp | GCAGAAGGCGCCGCGAGCCCGCGAAAGAGCTGGAAGTaGCCTTGGTACTGTGGCGCGGGGTACAGCGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: AEGAASPRKSWK*PWYCGAGYSAG Trigger: CCCCGCGCTGTACCCCGCGCCACAGTACCAAGGCCACTTCCAGCTCTTTCGCGGGCTCGCGGCGCCTTCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CAA 90 bp | CGAAGGGTTCAGGGGCTGGGGGTCTCGGAGTCGGGTGCGCCCAGCTaGTGTGCTCCTCGGAGCCCAAAGGCCCAGTCACCAACCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: RRVQGLGVSESGAPS*CAPRSPKAQSPTLG Trigger: GCCCAGGGTTGGTGACTGGGCCTTTGGGCTCCGAGGAGCACACAAGCTGGGCGCACCCGACTCCGAGACCCCCAGCCCCTGAACCCTTCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CAA 72 bp | AGGCGCCGCGAGCCCGCGAAAGAGCTGGAAGTGGCCTaGGTACTGTGGCGCGGGGTACAGCGCGGGGTATCC | + |
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Preference number: 6 (lower is better) Translates to: RRREPAKELEVA*VLWRGVQRGVS Trigger: GGATACCCCGCGCTGTACCCCGCGCCACAGTACCAAGGCCACTTCCAGCTCTTTCGCGGGCTCGCGGCGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CAA 90 bp | ACCAGCAGAAGGCGCCGCGAGCCCGCGAAAGAGCTGGAAGTGGCCTaGGTACTGTGGCGCGGGGTACAGCGCGGGGTATCCCGACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TSRRRREPAKELEVA*VLWRGVQRGVSRQQ Trigger: CTGCTGTCGGGATACCCCGCGCTGTACCCCGCGCCACAGTACCAAGGCCACTTCCAGCTCTTTCGCGGGCTCGCGGCGCCTTCTGCTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 72 bp | GGACCAGCAGAAGGCGCCGCGAGCCCGCGAAAGAGCTaGAAGTGGCCTTGGTACTGTGGCGCGGGGTACAGC | + |
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Preference number: 6 (lower is better) Translates to: GPAEGAASPRKS*KWPWYCGAGYS Trigger: GCTGTACCCCGCGCCACAGTACCAAGGCCACTTCCAGCTCTTTCGCGGGCTCGCGGCGCCTTCTGCTGGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 72 bp | TTCCCGGGGACAAGCCTGCGTCTCCGGCGATCGCAGTaGCCCCGAGTTCTGTGGCCACAGTCCCAGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: FPGTSLRLRRSQ*PRVLWPQSQVP Trigger: TGGGACCTGGGACTGTGGCCACAGAACTCGGGGCCACTGCGATCGCCGGAGACGCAGGCTTGTCCCCGGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 72 bp | GAGCCCGCGAAAGAGCTGGAAGTGGCCTTGGTACTGTaGCGCGGGGTACAGCGCGGGGTATCCCGACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: EPAKELEVALVL*RGVQRGVSRQQ Trigger: CTGCTGTCGGGATACCCCGCGCTGTACCCCGCGCCACAGTACCAAGGCCACTTCCAGCTCTTTCGCGGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS GCA 72 bp | TTCGTGCCCGCACGTATGTGCCGCCTGCCTCTTAGGTaGCAAAGTTCGCCGGCTGCGTTTGGGCGGCGCAGT | + |
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Preference number: 6 (lower is better) Translates to: FVPARMCRLPLR*QSSPAAFGRRS Trigger: ACTGCGCCGCCCAAACGCAGCCGGCGAACTTTGGCACCTAAGAGGCAGGCGGCACATACGTGCGGGCACGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 72 bp | CAGGTCCCAGACAATTCAAGAAGGAAGGGGGCGCCGTaGGACCAGCAGAAGGCGCCGCGAGCCCGCGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: QVPDNSRRKGAP*DQQKAPRARER Trigger: TCTTTCGCGGGCTCGCGGCGCCTTCTGCTGGTCCCACGGCGCCCCCTTCCTTCTTGAATTGTCTGGGACCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS GCA 72 bp | GTAGCTCTTCCCGCAGCCTTCGTGCCCGCACGTATGTaGCGCCTGCCTCTTAGGTGCCAAAGTTCGCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: VALPAAFVPARM*RLPLRCQSSPA Trigger: AGCCGGCGAACTTTGGCACCTAAGAGGCAGGCGGCACATACGTGCGGGCACGAAGGCTGCGGGAAGAGCTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 72 bp | CTGCGTCTCCGGCGATCGCAGTGGCCCCGAGTTCTGTaGCCACAGTCCCAGGTCCCAGACAATTCAAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LRLRRSQWPRVL*PQSQVPDNSRR Trigger: CCTTCTTGAATTGTCTGGGACCTGGGACTGTGGCCACAGAACTCGGGGCCACTGCGATCGCCGGAGACGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS TCA 72 bp | GCCCCAAATCCTGCGTCTCCTCAGACCGCCACCACTTaGGGAAGTCCTCCTGGGTGTCCAGGAACTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: APNPASPQTATT*GSPPGCPGTVP Trigger: TGGGACAGTTCCTGGACACCCAGGAGGACTTCCTCAAGTGGTGGCGGTCTGAGGAGACGCAGGATTTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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| CDS CCA 72 bp | GTCTCCTCAGACCGCCACCACTTGAGGAAGTCCTCCTaGGTGTCCAGGAACTGTCCCAGGGTGGTGAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: VSSDRHHLRKSS*VSRNCPRVVSV Trigger: TACACTCACCACCCTGGGACAGTTCCTGGACACCCAGGAGGACTTCCTCAAGTGGTGGCGGTCTGAGGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067060.10 ENSMUST00000239392.2 |
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