Pregenerated sensors for KLC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021288Ensembl transcript IDs: ENSMUST00000084941.12, ENSMUST00000118471.8, ENSMUST00000120544.9, ENSMUST00000122300.8, ENSMUST00000134578.2, ENSMUST00000239017.2
Found 381 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCCCAGCCCCACCCTGGCCTTCACAGGGCCAGCTCCGGAGCCGTaGTCAGCAGCAGCAGCAGCAGCAGCAGCATGGTGTCTAAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: PPSPTLAFTGPAPEP*SAAAAAAAAWCLKD Trigger: GTCCTTTAGACACCATGCTGCTGCTGCTGCTGCTGCTGCTGAGCACGGCTCCGGAGCTGGCCCTGTGAAGGCCAGGGTGGGGCTGGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| 3UTR GCA 90 bp | CACGCAGCAGCTGATCCACACATACCTAAGCCACCAGCTGTAGCCTaGCTTGCCACCCTGGCCACAGTGCTGCTGGCTCTGGCCAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: HAAADPHIPKPPAVA*LATLATVLLALARR Trigger: TCTTCTGGCCAGAGCCAGCAGCACTGTGGCCAGGGTGGCAAGGCAGGCTACAGCTGGTGGCTTAGGTATGTGTGGATCAGCTGCTGCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR TCA 90 bp | CTCTGTAGACCAGGCTCGCCCGGAATTCCACCTTCCTCTGCCTCCTaGGTGCTGGGATTCAAGTTGTGTGCCGCCACCCCTGGCCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: LCRPGSPGIPPSSAS*VLGFKLCAATPGLR Trigger: TCTTAGGCCAGGGGTGGCGGCACACAACTTGAATCCCAGCACTCAGGAGGCAGAGGAAGGTGGAATTCCGGGCGAGCCTGGTCTACAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR CCA 90 bp | TGTGCACTACCTGAAGACAGGGTTTCTGTGTGGCCCTGGCTGGCCTaGAACTCACTCTGTAGACCAGGCTCGCCCGGAATTCCACCTTCC | + |
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Preference number: 1 (lower is better) Translates to: CALPEDRVSVWPWLA*NSLCRPGSPGIPPS Trigger: GGAAGGTGGAATTCCGGGCGAGCCTGGTCTACAGAGTGAGTTCCAGGCCAGCCAGGGCCACACAGAAACCCTGTCTTCAGGTAGTGCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR GCA 90 bp | GCCCACCAGGTAAGTCGAGAGCATCTCTCAGGATATGGGACACCTTaGCACCAGTATCTGCATTCACTGCAGCCAGCTAGCTGCCCGGAC | + |
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Preference number: 1 (lower is better) Translates to: AHQVSREHLSGYGTP*HQYLHSLQPASCPD Trigger: GTCCGGGCAGCTAGCTGGCTGCAGTGAATGCAGATACTGGTGGCAAGGTGTCCCATATCCTGAGAGATGCTCTCGACTTACCTGGTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR CCA 90 bp | AATTTCCACACCAAGACTACACAGCAAATCTACGTCAGTGTGTCCTaGGGAGGCCCCGCGCAGGGCACCGGCCAGGTCTCTAAGTACGAC | + |
|
Preference number: 1 (lower is better) Translates to: NFHTKTTQQIYVSVS*GGPAQGTGQVSKYD Trigger: GTCGTACTTAGAGACCTGGCCGGTGCCCTGCGCGGGGCCTCCCCAGGACACACTGACGTAGATTTGCTGTGTAGTCTTGGTGTGGAAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| 3UTR GCA 90 bp | ACTACAACCAAGAGGACAAGCTCCCTCCTGGGCAGGCTAAGGAACTaGCAGGGCTTCAAGGGTGTCAGTGTTTCGTACTCTCAGGATCCT | + |
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Preference number: 1 (lower is better) Translates to: TTTKRTSSLLGRLRN*QGFKGVSVSYSQDP Trigger: AGGATCCTGAGAGTACGAAACACTGACACCCTTGAAGCCCTGGCAGTTCCTTAGCCTGCCCAGGAGGGAGCTTGTCCTCTTGGTTGTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR GCA 90 bp | AATTCCACCTTCCTCTGCCTCCTGAGTGCTGGGATTCAAGTTGTGTaGCGCCACCCCTGGCCTAAGAAAACCTGTAGCTGGTTGTGGTCA | + |
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Preference number: 1 (lower is better) Translates to: NSTFLCLLSAGIQVV*RHPWPKKTCSWLWS Trigger: TGACCACAACCAGCTACAGGTTTTCTTAGGCCAGGGGTGGCGGCACACAACTTGAATCCCAGCACTCAGGAGGCAGAGGAAGGTGGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR CCA 90 bp | CAGAAGAAGCCCCCAGGCACAGATGCAGATCAAGCAACAGAATTCTaGGGTGAGGCTGCCAGGCACCTTTTAAGCAAAGCCTACAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: QKKPPGTDADQATEF*GEAARHLLSKAYRL Trigger: CAGCCTGTAGGCTTTGCTTAAAAGGTGCCTGGCAGCCTCACCCCAGAATTCTGTTGCTTGATCTGCATCTGTGCCTGGGGGCTTCTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR GCA 90 bp | CCGAGCCCTGCTTTTCTCCTAAGGACATTAAGTGCAACAGAACCTTaGACAGTGCTGACTGCATACAAGTTCCCAGAGTGCTCTGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: PSPAFLLRTLSATEP*TVLTAYKFPECSEA Trigger: TGCTTCAGAGCACTCTGGGAACTTGTATGCAGTCAGCACTGTGCAAGGTTCTGTTGCACTTAATGTCCTTAGGAGAAAAGCAGGGCTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR GCA 90 bp | CACCATGAGGAACTGAGGAACATGGTGAAAGGGACAGCCGAGCCCTaGTTTTCTCCTAAGGACATTAAGTGCAACAGAACCTTGCACAGT | + |
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Preference number: 1 (lower is better) Translates to: HHEELRNMVKGTAEP*FSPKDIKCNRTLHS Trigger: ACTGTGCAAGGTTCTGTTGCACTTAATGTCCTTAGGAGAAAAGCAGGGCTCGGCTGTCCCTTTCACCATGTTCCTCAGTTCCTCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR GCA 90 bp | CAAATCTACGTCAGTGTGTCCTGGGGAGGCCCCGCGCAGGGCACCGGCCAGGTCCTACAGCTCAGTGACTaGACAGGTCACCATCATGCC | + |
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Preference number: 2 (lower is better) Translates to: QIYVSVSWGGPAQGTGQVLQLSD*TGHHHA Trigger: GGCATGATGGTGACCTGTGCAGTCACTGAGCTGTAG...GACCTGGCCGGTGCCCTGCGCGGGGCCTCCCCAGGACACACTGACGTAGATTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| 3UTR-3UTR CCA 90 bp | CGTCCACCGCCAACACTGACCCGACAGAGGGGAGGTCTACAGAGCCCCGTGGGACAAGCAACAGAATTCTaGGGTGAGGCTGCCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: RPPPTLTRQRGGLQSPVGQATEF*GEAARH Trigger: GTGCCTGGCAGCCTCACCCCAGAATTCTGTTGCTTG...TCCCACGGGGCTCTGTAGACCTCCCCTCTGTCGGGTCAGTGTTGGCGGTGGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGGCAGCAGCAGCAGCATaGTGTCTAAAGGACCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: QAEAARARRVLLVGLPGRAAAAA*CLKDQA Trigger: GGCCTGGTCCTTTAGACACCATGCTGCTGCTGCTGC...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCGTGACACTAAGGCCTGTCTTCAAGGTGAACAGCTACTCTCTCTTAACTGTCTGCCCGTCCCGCCATaGAGGAGCAGGGGGAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: LRDTKACLQGEQLLSLNCLPVPP*RSRGRH Trigger: GTGCCTCCCCCTGCTCCTGCATGGCGGGACGGGCAG...ACAGTTAAGAGAGAGTAGCTGTTCACCTTGAAGACAGGCCTTAGTGTCACGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| 3UTR-3UTR CCA 90 bp | ACAAGTTCCCAGAGTGCTCTGAAGCAGTGTCAGCTAGTCAAGCCAGCTGACTCCCAGTGCTGCTGGCTCTaGCCAGAAGAAGCCCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: TSSQSALKQCQLVKPADSQCCWL*PEEAPR Trigger: CCTGGGGGCTTCTTCTGGCCAGAGCCAGCAGCACTG...GGAGTCAGCTGGCTTGACTAGCTGACACTGCTTCAGAGCACTCTGGGAACTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCACCATGAGGAACTGAGGAACATGGTGAAAGGGACAGCCGAGCCCTGCTTTTGGCCACAGTGCTGCTaGCTCTGGCCAGAAGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: AHHEELRNMVKGTAEPCFWPQCC*LWPEEA Trigger: GGCTTCTTCTGGCCAGAGCCAGCAGCACTGTGGCCA...AAAGCAGGGCTCGGCTGTCCCTTTCACCATGTTCCTCAGTTCCTCATGGTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR CCA 90 bp | CATGAGGAACTGAGGAACATGGTGAAAGGGACAGCCGAGCCCTGCTTTTCTCCTGTCTACAGAGCCCCGTaGGAAGCAACTCCCCTTGCG | + |
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Preference number: 2 (lower is better) Translates to: HEELRNMVKGTAEPCFSPVYRAP*EATPLA Trigger: CGCAAGGGGAGTTGCTTCCCACGGGGCTCTGTAGAC...AGGAGAAAAGCAGGGCTCGGCTGTCCCTTTCACCATGTTCCTCAGTTCCTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR TCA 90 bp | TGCACAGTGCTGACTGCATACAAGTTCCCAGAGTGCTCTGAAGCAGTGTCAGCTCGCAGCTCCTCAGACTaGTGCGAGGCTGAGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: CTVLTAYKFPECSEAVSARSSSD*CEAETE Trigger: CTCTGTCTCAGCCTCGCATCAGTCTGAGGAGCTGCG...AGCTGACACTGCTTCAGAGCACTCTGGGAACTTGTATGCAGTCAGCACTGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR GCA 90 bp | TGCACAGTGCTGACTGCATACAAGTTCCCAGAGTGCTCTGAAGCAGTGTCAGCTCCCTGGCCACAGTGCTaGTGGCTCTGGCCAGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: CTVLTAYKFPECSEAVSAPWPQC*WLWPEE Trigger: TTCTTCTGGCCAGAGCCAGCAGCACTGTGGCCAGGG...AGCTGACACTGCTTCAGAGCACTCTGGGAACTTGTATGCAGTCAGCACTGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR GCA 90 bp | CGTAACATCTCTAGCAGCATCCCAGGAGACTTCTATCTGAGCATCTGCGCTCTTCCACCCTGGCCACAGTaGTGCTGGCTCTGGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: RNISSSIPGDFYLSICALPPWPQ*CWLWPE Trigger: TTCTGGCCAGAGCCAGCAGCACTGTGGCCAGGGTGG...AAGAGCGCAGATGCTCAGATAGAAGTCTCCTGGGATGCTGCTAGAGATGTTACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGTTCCCAGAGTGCTCTGAAGCAGTGTCAGCTAGTCAAGCCAGCTGACTCCCAAAACCCTGGTGTTTaGTGGGAACCACGCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: TSSQSALKQCQLVKPADSQNPGV*WEPRSS Trigger: GGAGCTGCGTGGTTCCCATCAAACACCAGGGTTTTG...GGAGTCAGCTGGCTTGACTAGCTGACACTGCTTCAGAGCACTCTGGGAACTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR GCA 90 bp | TGCACAGTGCTGACTGCATACAAGTTCCCAGAGTGCTCTGAAGCAGTGTCAGCTCTGAGACAGAGTCCCTaGAACCCAAAGGCCACCCCT | + |
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Preference number: 2 (lower is better) Translates to: CTVLTAYKFPECSEAVSALRQSP*NPKATP Trigger: AGGGGTGGCCTTTGGGTTGCAGGGACTCTGTCTCAG...AGCTGACACTGCTTCAGAGCACTCTGGGAACTTGTATGCAGTCAGCACTGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR CCA 90 bp | CGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCGCAGCAGCAGCAGCATaGTGTCTAAAGGACCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: RHRTKHMRSATKRPGRSSAAAAA*CLKDQA Trigger: GGCCTGGTCCTTTAGACACCATGCTGCTGCTGCTGC...GCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCGTAACATCTCTAGCAGCATCCCAGGAGACTTCTATCTGAGCATCTGCGCTGTTTCTGTGTGGCCCTaGCTGGCCTGGAACTCACTC | + |
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Preference number: 2 (lower is better) Translates to: LRNISSSIPGDFYLSICAVSVWP*LAWNSL Trigger: GAGTGAGTTCCAGGCCAGCCAGGGCCACACAGAAAC...AGCGCAGATGCTCAGATAGAAGTCTCCTGGGATGCTGCTAGAGATGTTACGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR TCA 90 bp | TGCACAGTGCTGACTGCATACAAGTTCCCAGAGTGCTCTGAAGCAGTGTCAGCTCCTTCCTCTGCCTCCTaGGTGCTGGGATTCAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: CTVLTAYKFPECSEAVSAPSSAS*VLGFKL Trigger: CAACTTGAATCCCAGCACTCAGGAGGCAGAGGAAGG...AGCTGACACTGCTTCAGAGCACTCTGGGAACTTGTATGCAGTCAGCACTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR CCA 90 bp | CGTAACATCTCTAGCAGCATCCCAGGAGACTTCTATCTGAGCATCTGCGCTCTTCTGTGTGGCCCTGGCTaGCCTGGAACTCACTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: RNISSSIPGDFYLSICALLCGPG*PGTHSV Trigger: TACAGAGTGAGTTCCAGGCCAGCCAGGGCCACACAG...AAGAGCGCAGATGCTCAGATAGAAGTCTCCTGGGATGCTGCTAGAGATGTTACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR TCA 90 bp | TGCACAGTGCTGACTGCATACAAGTTCCCAGAGTGCTCTGAAGCAGTGTCAGCTACCCTGTGCACTACCTaGAGACAGGGTTTCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: CTVLTAYKFPECSEAVSATLCTT*RQGFCV Trigger: CACACAGAAACCCTGTCTTCAGGTAGTGCACAGGGT...AGCTGACACTGCTTCAGAGCACTCTGGGAACTTGTATGCAGTCAGCACTGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAGTTTATTAGAAGTTAGAAAGACACATACACACATCACGGAGCACTTCAGATACGTCAGTGTGTCCTaGGGAGGCCCCGCGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: VSLLEVRKTHTHITEHFRYVSVS*GGPAQG Trigger: GCCCTGCGCGGGGCCTCCCCAGGACACACTGACGTA...TCTGAAGTGCTCCGTGATGTGTGTATGTGTCTTTCTAACTTCTAATAAACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCCATGGCTTCTGAGGCACTCGCACTGGTATGGCCTGCTGAACCATCTCTCCGCTAAACAGACACTGTaGGCTCTGAAGGAAGTATTT | + |
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Preference number: 2 (lower is better) Translates to: FPWLLRHSHWYGLLNHLSAKQTL*ALKEVF Trigger: AAATACTTCCTTCAGAGCTCACAGTGTCTGTTTAGC...GGAGAGATGGTTCAGCAGGCCATACCAGTGCGAGTGCCTCAGAAGCCATGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR TCA 90 bp | CATGAGGAACTGAGGAACATGGTGAAAGGGACAGCCGAGCCCTGCTTTTCTCCTAGACACTGTGAGCTCTaGAGGAAGTATTTTAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: HEELRNMVKGTAEPCFSPRHCEL*RKYFKL Trigger: AAGCTTAAAATACTTCCTTCAGAGCTCACAGTGTCT...AGGAGAAAAGCAGGGCTCGGCTGTCCCTTTCACCATGTTCCTCAGTTCCTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR GCA 90 bp | CGTAACATCTCTAGCAGCATCCCAGGAGACTTCTATCTGAGCATCTGCGCTCTTCCTAAGGACATTAAGTaGAACAGAACCTTGCACAGT | + |
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Preference number: 2 (lower is better) Translates to: RNISSSIPGDFYLSICALPKDIK*NRTLHS Trigger: ACTGTGCAAGGTTCTGTTGCACTTAATGTCCTTAGG...AAGAGCGCAGATGCTCAGATAGAAGTCTCCTGGGATGCTGCTAGAGATGTTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR TCA 90 bp | GTATTGAAAATTAGAAGACAGTTCCCAGAGGCACTTAGAATCTATGCCCAAAGGAACAGAATTCTGGGGTaGGGCTGCCAGGCACCTTTT | + |
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Preference number: 2 (lower is better) Translates to: VLKIRRQFPEALRIYAQRNRILG*GCQAPF Trigger: AAAAGGTGCCTGGCAGCCTCACCCCAGAATTCTGTT...CCTTTGGGCATAGATTCTAAGTGCCTCTGGGAACTGTCTTCTAATTTTCAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR TCA 90 bp | ACACATACACACATCACGGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAACTCCTACAGCTCAGTaGCTGCACAGGTCACCATCA | + |
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Preference number: 2 (lower is better) Translates to: THTHITEHFRLVEKSRIQTPTAQ*LHRSPS Trigger: TGATGGTGACCTGTGCAGTCACTGAGCTGTAGGAGT...TTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCCGTGATGTGTGTATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| 3UTR-3UTR TCA 90 bp | GTATTGAAAATTAGAAGACAGTTCCCAGAGGCACTTAGAATCTATGCCCAAAGGTATTCCTATGAACGCTaGCTTTCCCAGGCTGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: VLKIRRQFPEALRIYAQRYSYER*LSQAGK Trigger: CTTGCCAGCCTGGGAAAGTCAGCGTTCATAGGAATA...CCTTTGGGCATAGATTCTAAGTGCCTCTGGGAACTGTCTTCTAATTTTCAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAAAATTAGAAGACAGTTCCCAGAGGCACTTAGAATCTATGCCCAAAGGTTCGCATCTCTCAGGATATaGGACACCTTGCCACCAGTA | + |
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Preference number: 2 (lower is better) Translates to: LKIRRQFPEALRIYAQRFASLRI*DTLPPV Trigger: TACTGGTGGCAAGGTGTCCCATATCCTGAGAGATGC...GAACCTTTGGGCATAGATTCTAAGTGCCTCTGGGAACTGTCTTCTAATTTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTTATTAGAAGTTAGAAAGACACATACACACATCACGGAGCACTTCAGATTAAGTACGACAGGGACGTaGAGCACATGCCTCACTCCT | + |
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Preference number: 2 (lower is better) Translates to: SLLEVRKTHTHITEHFRLSTTGT*STCLTP Trigger: AGGAGTGAGGCATGTGCTGCACGTCCCTGTCGTACT...TAATCTGAAGTGCTCCGTGATGTGTGTATGTGTCTTTCTAACTTCTAATAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| 3UTR-3UTR TCA 90 bp | TTATTAGAAGTTAGAAAGACACATACACACATCACGGAGCACTTCAGATTAGTAACTCCTACAGCTCAGTaGCTGCACAGGTCACCATCA | + |
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Preference number: 2 (lower is better) Translates to: LLEVRKTHTHITEHFRLVTPTAQ*LHRSPS Trigger: TGATGGTGACCTGTGCAGTCACTGAGCTGTAGGAGT...TACTAATCTGAAGTGCTCCGTGATGTGTGTATGTGTCTTTCTAACTTCTAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| 3UTR GCA 72 bp | CCCACCCTGGCCTTCACAGGGCCAGCTCCGGAGCCGTaGTCAGCAGCAGCAGCAGCAGCAGCAGCATGGTGT | + |
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Preference number: 3 (lower is better) Translates to: PTLAFTGPAPEP*SAAAAAAAAWC Trigger: ACACCATGCTGCTGCTGCTGCTGCTGCTGCTGAGCACGGCTCCGGAGCTGGCCCTGTGAAGGCCAGGGTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| 3UTR TCA 72 bp | GACCCTAGACCACTGCACAGCGTCCACCGCCAACACTaGCCCGACAGAGGGGAGGTCTACAGAGCCCCGTGG | + |
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Preference number: 3 (lower is better) Translates to: DPRPLHSVHRQH*PDRGEVYRAPW Trigger: CCACGGGGCTCTGTAGACCTCCCCTCTGTCGGGTCAGTGTTGGCGGTGGACGCTGTGCAGTGGTCTAGGGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR GCA 72 bp | GCTCGCCCGGAATTCCACCTTCCTCTGCCTCCTGAGTaGTGGGATTCAAGTTGTGTGCCGCCACCCCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: ARPEFHLPLPPE*WDSSCVPPPLA Trigger: GGCCAGGGGTGGCGGCACACAACTTGAATCCCAGCACTCAGGAGGCAGAGGAAGGTGGAATTCCGGGCGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR TCA 72 bp | CCAGGCTCGCCCGGAATTCCACCTTCCTCTGCCTCCTaGGTGCTGGGATTCAAGTTGTGTGCCGCCACCCCT | + |
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Preference number: 3 (lower is better) Translates to: PGSPGIPPSSAS*VLGFKLCAATP Trigger: AGGGGTGGCGGCACACAACTTGAATCCCAGCACTCAGGAGGCAGAGGAAGGTGGAATTCCGGGCGAGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR CCA 72 bp | ACCAAGACTACACAGCAAATCTACGTCAGTGTGTCCTaGGGAGGCCCCGCGCAGGGCACCGGCCAGGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: TKTTQQIYVSVS*GGPAQGTGQVS Trigger: AGAGACCTGGCCGGTGCCCTGCGCGGGGCCTCCCCAGGACACACTGACGTAGATTTGCTGTGTAGTCTTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| 3UTR TCA 72 bp | ATGGGAACCACGCAGCTCCTCAGACTGATGCGAGGCTaGGACAGAGTCCCTGCAACCCAAAGGCCACCCCTG | + |
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Preference number: 3 (lower is better) Translates to: MGTTQLLRLMRG*DRVPATQRPPL Trigger: CAGGGGTGGCCTTTGGGTTGCAGGGACTCTGTCTCAGCCTCGCATCAGTCTGAGGAGCTGCGTGGTTCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR CCA 72 bp | CACCGGGTCTTTCCATGGCTTCTGAGGCACTCGCACTaGTATGGCCTGCTGAACCATCTCTCCAGCCCCAAC | + |
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Preference number: 3 (lower is better) Translates to: HRVFPWLLRHSH*YGLLNHLSSPN Trigger: GTTGGGGCTGGAGAGATGGTTCAGCAGGCCATACCAGTGCGAGTGCCTCAGAAGCCATGGAAAGACCCGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR CCA 72 bp | GGTCTTTCCATGGCTTCTGAGGCACTCGCACTGGTATaGCCTGCTGAACCATCTCTCCAGCCCCAACCCTGT | + |
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Preference number: 3 (lower is better) Translates to: GLSMASEALALV*PAEPSLQPQPC Trigger: ACAGGGTTGGGGCTGGAGAGATGGTTCAGCAGGCCATACCAGTGCGAGTGCCTCAGAAGCCATGGAAAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| 3UTR TCA 72 bp | ACACATGGCACTCTCCTGAGGGTCCCTCGCTCACCATaGGGAACTGAGGAACATGGTGAAAGGGACAGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: THGTLLRVPRSP*GTEEHGERDSR Trigger: TCGGCTGTCCCTTTCACCATGTTCCTCAGTTCCTCATGGTGAGCGAGGGACCCTCAGGAGAGTGCCATGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR GCA 72 bp | TTCCTCTGCCTCCTGAGTGCTGGGATTCAAGTTGTGTaGCGCCACCCCTGGCCTAAGAAAACCTGTAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FLCLLSAGIQVV*RHPWPKKTCSW Trigger: CCAGCTACAGGTTTTCTTAGGCCAGGGGTGGCGGCACACAACTTGAATCCCAGCACTCAGGAGGCAGAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR GCA 72 bp | AAGAGGACAAGCTCCCTCCTGGGCAGGCTAAGGAACTaGCAGGGCTTCAAGGGTGTCAGTGTTTCGTACTCT | + |
|
Preference number: 3 (lower is better) Translates to: KRTSSLLGRLRN*QGFKGVSVSYS Trigger: AGAGTACGAAACACTGACACCCTTGAAGCCCTGGCAGTTCCTTAGCCTGCCCAGGAGGGAGCTTGTCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR CCA 72 bp | CCCCCAGGCACAGATGCAGATCAAGCAACAGAATTCTaGGGTGAGGCTGCCAGGCACCTTTTAAGCAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PPGTDADQATEF*GEAARHLLSKA Trigger: GGCTTTGCTTAAAAGGTGCCTGGCAGCCTCACCCCAGAATTCTGTTGCTTGATCTGCATCTGTGCCTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR-3UTR CAA 90 bp | CGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCACCAGGTCACCACCCTaGCTGACTGAGAGTGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RHRTKHMRSATKRPGRSSTRSPP*LTESGS Trigger: AGAGCCACTCTCAGTCAGCAAGGGTGGTGACCTGGT...GCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| 3UTR TCA 72 bp | AAGAGCTTCCCCAGCAATAAACACATGGCACTCTCCTaGGGGTCCCTCGCTCACCATGAGGAACTGAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: KSFPSNKHMALS*GSLAHHEELRN Trigger: GTTCCTCAGTTCCTCATGGTGAGCGAGGGACCCTCAGGAGAGTGCCATGTGTTTATTGCTGGGGAAGCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR TCA 72 bp | GTAACATCTCTAGCAGCATCCCAGGAGACTTCTATCTaGGCATCTGCGCTCTTCCAGCACCCAGCACCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: VTSLAASQETSI*ASALFQHPAPR Trigger: CCTAGGTGCTGGGTGCTGGAAGAGCGCAGATGCTCAGATAGAAGTCTCCTGGGATGCTGCTAGAGATGTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR CCA 72 bp | GGCCCACCAGGTAAGTCGAGAGCATCTCTCAGGATATaGGACACCTTGCCACCAGTATCTGCATTCACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GPPGKSRASLRI*DTLPPVSAFTA Trigger: TGCAGTGAATGCAGATACTGGTGGCAAGGTGTCCCATATCCTGAGAGATGCTCTCGACTTACCTGGTGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR TCA 72 bp | GGGACGTGCAGCACATGCCTCACTCCTACAGCTCAGTaGCTGCACAGGTCACCATCATGCCACTGTAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: GTCSTCLTPTAQ*LHRSPSCHCNK Trigger: TTTATTACAGTGGCATGATGGTGACCTGTGCAGTCACTGAGCTGTAGGAGTGAGGCATGTGCTGCACGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| 3UTR TCA 72 bp | AGGCACAGATGCAGATCAAGCAACAGAATTCTGGGGTaGGGCTGCCAGGCACCTTTTAAGCAAAGCCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: RHRCRSSNRILG*GCQAPFKQSLQ Trigger: CTGTAGGCTTTGCTTAAAAGGTGCCTGGCAGCCTCACCCCAGAATTCTGTTGCTTGATCTGCATCTGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCAAGATGGTGCAGAGAGTAAAGAAACTTaGAGCACAATGGCAACCTGGTTCACTCTCTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PGWQDGAESKET*STMATWFTLWN Trigger: GTTCCAGAGAGTGAACCAGGTTGCCATTGTGCTGCAAGTTTCTTTACTCTCTGCACCATCTTGCCAGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR CCA 72 bp | GCTGCCAGGCACCTTTTAAGCAAAGCCTACAGGCTGTaGACATCCCCATCTACAGAAAGTCCACTACAACCA | + |
|
Preference number: 3 (lower is better) Translates to: AARHLLSKAYRL*TSPSTESPLQP Trigger: TGGTTGTAGTGGACTTTCTGTAGATGGGGATGTCCACAGCCTGTAGGCTTTGCTTAAAAGGTGCCTGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCACCATGAGGAACTGAGGAACATGGTGAAAGGGACAGCCGAGCCCTGCTTTAAGTTAGTCTCACAATaGCCACAGGTTGATCGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: AHHEELRNMVKGTAEPCFKLVSQ*PQVDRK Trigger: TTTCCGATCAACCTGTGGCAATTGTGAGACTAACTT...AAAGCAGGGCTCGGCTGTCCCTTTCACCATGTTCCTCAGTTCCTCATGGTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR GCA 72 bp | GAACTGAGGAACATGGTGAAAGGGACAGCCGAGCCCTaGTTTTCTCCTAAGGACATTAAGTGCAACAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: ELRNMVKGTAEP*FSPKDIKCNRT Trigger: GGTTCTGTTGCACTTAATGTCCTTAGGAGAAAAGCAGGGCTCGGCTGTCCCTTTCACCATGTTCCTCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR GCA 72 bp | GACTATGTAAGAACCAACACCCAGCACCTAGGACTATaGACCCCCAAGAGCTTCCCCAGCAATAAACACATG | + |
|
Preference number: 3 (lower is better) Translates to: DYVRTNTQHLGL*TPKSFPSNKHM Trigger: CATGTGTTTATTGCTGGGGAAGCTCTTGGGGGTGCATAGTCCTAGGTGCTGGGTGTTGGTTCTTACATAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR GCA 72 bp | CTCTCTGGAACCATGAGAAGAAGAGAACGGAATGAATaGAGAGGTATCCTGATCTCCACACAGCGGACACAC | + |
|
Preference number: 3 (lower is better) Translates to: LSGTMRRRERNE*RGILISTQRTH Trigger: GTGTGTCCGCTGTGTGGAGATCAGGATACCTCTGCATTCATTCCGTTCTCTTCTTCTCATGGTTCCAGAGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCGTAACATCTCTAGCAGCATCCCAGGAGACTTCTATCTGAGCATCTGCGCTCACAATTGCCACAGGTaGATCGGAAACACTGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LRNISSSIPGDFYLSICAHNCHR*IGNTVK Trigger: TTTGACAGTGTTTCCGATCAACCTGTGGCAATTGTG...AGCGCAGATGCTCAGATAGAAGTCTCCTGGGATGCTGCTAGAGATGTTACGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR TCA 72 bp | TTCACTCTCTGGAACCATGAGAAGAAGAGAACGGAATaGATGCAGAGGTATCCTGATCTCCACACAGCGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FTLWNHEKKRTE*MQRYPDLHTAD Trigger: GTCCGCTGTGTGGAGATCAGGATACCTCTGCATTCATTCCGTTCTCTTCTTCTCATGGTTCCAGAGAGTGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR TCA 72 bp | CAGCACAATGGCAACCTGGTTCACTCTCTGGAACCATaGGAAGAAGAGAACGGAATGAATGCAGAGGTATCC | + |
|
Preference number: 3 (lower is better) Translates to: QHNGNLVHSLEP*EEENGMNAEVS Trigger: GGATACCTCTGCATTCATTCCGTTCTCTTCTTCTCATGGTTCCAGAGAGTGAACCAGGTTGCCATTGTGCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR GCA 72 bp | ACAGCCGAGCCCTGCTTTTCTCCTAAGGACATTAAGTaGAACAGAACCTTGCACAGTGCTGACTGCATACAA | + |
|
Preference number: 3 (lower is better) Translates to: TAEPCFSPKDIK*NRTLHSADCIQ Trigger: TTGTATGCAGTCAGCACTGTGCAAGGTTCTGTTGCACTTAATGTCCTTAGGAGAAAAGCAGGGCTCGGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR GCA 72 bp | GCTTTTCTCCTAAGGACATTAAGTGCAACAGAACCTTaGACAGTGCTGACTGCATACAAGTTCCCAGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: AFLLRTLSATEP*TVLTAYKFPEC Trigger: GCACTCTGGGAACTTGTATGCAGTCAGCACTGTGCAAGGTTCTGTTGCACTTAATGTCCTTAGGAGAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR CCA 72 bp | GCAGAGAGTAAAGAAACTTGCAGCACAATGGCAACCTaGTTCACTCTCTGGAACCATGAGAAGAAGAGAACG | + |
|
Preference number: 3 (lower is better) Translates to: AESKETCSTMAT*FTLWNHEKKRT Trigger: CGTTCTCTTCTTCTCATGGTTCCAGAGAGTGAACCAGGTTGCCATTGTGCTGCAAGTTTCTTTACTCTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR TCA 72 bp | CACATCTCAGCATTCAGTATATATTCCTATGAACGCTaGCTTTCCCAGGCTGGCAAGATGGTGCAGAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: HISAFSIYSYER*LSQAGKMVQRV Trigger: TACTCTCTGCACCATCTTGCCAGCCTGGGAAAGTCAGCGTTCATAGGAATATATACTGAATGCTGAGATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR TCA 72 bp | GTAAGCACACATCTCAGCATTCAGTATATATTCCTATaGACGCTGACTTTCCCAGGCTGGCAAGATGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VSTHLSIQYIFL*TLTFPGWQDGA Trigger: TGCACCATCTTGCCAGCCTGGGAAAGTCAGCGTTCATAGGAATATATACTGAATGCTGAGATGTGTGCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR TCA 72 bp | AAATACATTATCACACACGACACAGAACTAAACACATaGGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KYIITHDTELNT*EVPQRGQAEAA Trigger: TGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGTGTGATAATGTATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| 3UTR CCA 72 bp | GTCAATGAATTAATTTTAAATACCAGCCCAAAACCCTaGTGTTTGATGGGAACCACGCAGCTCCTCAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: VNELILNTSPKP*CLMGTTQLLRL Trigger: CAGTCTGAGGAGCTGCGTGGTTCCCATCAAACACCAGGGTTTTGGGCTGGTATTTAAAATTAATTCATTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR-3UTR CAA 90 bp | GTATTGAAAATTAGAAGACAGTTCCCAGAGGCACTTAGAATCTATGCCCAAAGGAAGTGCAACAGAACCTaGCACAGTGCTGACTGCATA | + |
|
Preference number: 3 (lower is better) Translates to: VLKIRRQFPEALRIYAQRKCNRT*HSADCI Trigger: TATGCAGTCAGCACTGTGCAAGGTTCTGTTGCACTT...CCTTTGGGCATAGATTCTAAGTGCCTCTGGGAACTGTCTTCTAATTTTCAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR TCA 90 bp | GGCGCTGCCCGTCCCGCCATGCAGGAGCAGGGGGAGGCACCGGGCGGGCGGCTAGCTGCCACCGCGGGGTaGTCTCTGCCCAGGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GAARPAMQEQGEAPGGRLAATAG*SLPRVF Trigger: GAAAACCCTGGGCAGAGATCACCCCGCGGTGGCAGC...TAGCCGCCCGCCCGGTGCCTCCCCCTGCTCCTGCATGGCGGGACGGGCAGCGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGAGGCGCTGCCCGTCCCGCCATGCAGGAGCAGGGGGAGGCACCGGGCGGGCCTCCAGGGCCTGCTTaGAGAGTGGCACCGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: AGGAARPAMQEQGEAPGGPPGPA*RVAPPP Trigger: AGGTGGCGGTGCCACTCTGCAAGCAGGCCCTGGAGG...CCCGCCCGGTGCCTCCCCCTGCTCCTGCATGGCGGGACGGGCAGCGCCTCCTGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | AGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCATGCAGGAGCAGGGGGAGGCACCGAGCGTGCGCAGCCTTaGAGGGATCTCGTAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGRRRRCPSRHAGAGGGTERAQP*RDLVAA Trigger: GGCGGCTACGAGATCCCTGCAAGGCTGCGCACGCTC...GGTGCCTCCCCCTGCTCCTGCATGGCGGGACGGGCAGCGCCTCCTGCGGCCCCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | CACTGGAGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCATGCAGGAGCAGGGGGAAGATCCTCCAGGGCCTaGTTGCAGAGTGGCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HWRGRRRRCPSRHAGAGGRSSRA*LQSGTA Trigger: GGCGGTGCCACTCTGCAAGCAGGCCCTGGAGGATCT...TCCCCCTGCTCCTGCATGGCGGGACGGGCAGCGCCTCCTGCGGCCCCTCCAGTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR TCA 90 bp | CTGCTAGACAGCGGAGGGACAGCACTGGAGGGGCCGCAGGAGGCGCTGCCCGTCGCTGCCACCGCGGGGTaGTCTCTGCCCAGGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLDSGGTALEGPQEALPVAATAG*SLPRVF Trigger: GAAAACCCTGGGCAGAGATCACCCCGCGGTGGCAGC...GACGGGCAGCGCCTCCTGCGGCCCCTCCAGTGCTGTCCCTCCGCTGTCTAGCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | CGGAGGGACAGCACTGGAGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCATGCAGCCAAGTTGTGGAGCGTaGGCAGCCTTGCAGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: RRDSTGGAAGGAARPAMQPSCGA*AALQGS Trigger: AGATCCCTGCAAGGCTGCGCACGCTCCACAACTTGG...CTGCATGGCGGGACGGGCAGCGCCTCCTGCGGCCCCTCCAGTGCTGTCCCTCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | GCTGACACGCCCCTAGGGCTGCTAGACAGCGGAGGGACAGCACTGGAGGGGCCGCCTCCAGGGCCTGCTTaGAGAGTGGCACCGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ADTPLGLLDSGGTALEGPPPGPA*RVAPPP Trigger: AGGTGGCGGTGCCACTCTGCAAGCAGGCCCTGGAGG...CGGCCCCTCCAGTGCTGTCCCTCCGCTGTCTAGCAGCCCTAGGGGCGTGTCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | GACAGCGGAGGGACAGCACTGGAGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCAGCCGACCCGTCCTTCTaGTTGCCTTTGCACTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSGGTALEGPQEALPVPPADPSF*LPLHSS Trigger: AGAGGAGTGCAAAGGCAAGCAGAAGGACGGGTCGGC...TGGCGGGACGGGCAGCGCCTCCTGCGGCCCCTCCAGTGCTGTCCCTCCGCTGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR TCA 90 bp | AGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCATGCAGGAGCAGGGGGAGGCACCCTCGTAACGCCCCTGTaGAGCATACTGGATCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGRRRRCPSRHAGAGGGTLVTPL*SILDHQ Trigger: TTGGTGATCCAGTATGCTTCACAGGGGCGTTACGAG...GGTGCCTCCCCCTGCTCCTGCATGGCGGGACGGGCAGCGCCTCCTGCGGCCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR TCA 90 bp | CTGGAGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCATGCAGGAGCAGGGGGAGGGCCACTCTCTGTTTGTaGACATTGTCAAGACCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEGPQEALPVPPCRSRGRATLCL*TLSRPC Trigger: GCAGGGTCTTGACAATGTTCACAAACAGAGAGTGGC...CCTCCCCCTGCTCCTGCATGGCGGGACGGGCAGCGCCTCCTGCGGCCCCTCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | GCGGAGGGACAGCACTGGAGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCATGCATTCTGCAACTTCTGCTaGGTGTTGGCCAGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AEGQHWRGRRRRCPSRHAFCNFC*VLASSS Trigger: GGATGAGCTGGCCAACACGCAGCAGAAGTTGCAGAA...TGCATGGCGGGACGGGCAGCGCCTCCTGCGGCCCCTCCAGTGCTGTCCCTCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | CACTGGAGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCATGCAGGAGCAGGGGGACTCTTCTGCAACTTCTaGTGCGTGTTGGCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HWRGRRRRCPSRHAGAGGLFCNF*CVLASS Trigger: TGAGCTGGCCAACACGCAGCAGAAGTTGCAGAAGAG...TCCCCCTGCTCCTGCATGGCGGGACGGGCAGCGCCTCCTGCGGCCCCTCCAGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | CGGAGGGACAGCACTGGAGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCATGCAGACCCGTCCTTCTGCTTaGCTTTGCACTCCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRDSTGGAAGGAARPAMQTRPSA*LCTPLS Trigger: AGAGAGAGGAGTGCAAAGGCAAGCAGAAGGACGGGT...CTGCATGGCGGGACGGGCAGCGCCTCCTGCGGCCCCTCCAGTGCTGTCCCTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR TCA 90 bp | TACGTCAGTGTGTCCTGGGGAGGCCCCGCGCAGGGCACCGGCCAGGTCTCTAAGGCTCGTGTGCGCGGGTaGGAATCTCCTTGTACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: YVSVSWGGPAQGTGQVSKARVRG*ESPCTA Trigger: CGCTGTACAAGGAGATTCTCACCCGCGCACACGAGC...CTTAGAGACCTGGCCGGTGCCCTGCGCGGGGCCTCCCCAGGACACACTGACGTA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | GACAGCACTGGAGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCATGCAGGAGCAGCTCTTCTGCAACTTCTaGTGCGTGTTGGCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSTGGAAGGAARPAMQEQLFCNF*CVLASS Trigger: TGAGCTGGCCAACACGCAGCAGAAGTTGCAGAAGAG...CTGCTCCTGCATGGCGGGACGGGCAGCGCCTCCTGCGGCCCCTCCAGTGCTGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | GACAGCACTGGAGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCATGCAGGAGCAGAGGGCTTCCAGCCCCTaGATCACTTGCTTGGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: DSTGGAAGGAARPAMQEQRASSP*ITCLVL Trigger: TAAGACCAAGCAAGTGATCCAGGGGCTGGAAGCCCT...CTGCTCCTGCATGGCGGGACGGGCAGCGCCTCCTGCGGCCCCTCCAGTGCTGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGGCTGCCACCGCGGGGTaGTCTCTGCCCAGGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRAATAG*SLPRVF Trigger: GAAAACCCTGGGCAGAGATCACCCCGCGGTGGCAGC...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR TCA 90 bp | GCGGCCGACGTGGTGAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCGCTCGTGTGCGCGGGTaGGAATCTCCTTGTACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: AADVVSAACAHRWPSDSAARVRG*ESPCTA Trigger: CGCTGTACAAGGAGATTCTCACCCGCGCACACGAGC...GGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTCACCACGTCGGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCGAGCGTGCGCAGCCTTaGAGGGATCTCGTAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRPGRSSKSQTCPARRPPERAQP*RDLVAA Trigger: GGCGGCTACGAGATCCCTGCAAGGCTGCGCACGCTC...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGCCTCCAGGGCCTGCTTaGAGAGTGGCACCGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRPPGPA*RVAPPP Trigger: AGGTGGCGGTGCCACTCTGCAAGCAGGCCCTGGAGG...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | CGTGGTGAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGGGTCACAGGCTCTGCGGGGGATaGCTTCCTCCCCTCCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGECCLCSQMAQRLSQGHRLCGG*LPPLRQ Trigger: CTGACGGAGGGGAGGAAGGCATCCCCCGCAGAGCCT...GTGACCCTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTCACCACG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
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| CDS-3UTR CCA 90 bp | ACAGCACTGGAGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCATGCAGGAGCAGGCAGCATTCAGGTGATTaGACAGCGCCATCATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TALEGPQEALPVPPCRSRQHSGD*TAPSSP Trigger: AGGTGATGATGGCGCTGTCCAATCACCTGAATGCTG...CCTGCTCCTGCATGGCGGGACGGGCAGCGCCTCCTGCGGCCCCTCCAGTGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR CCA 90 bp | GGCGCTGCCCGTCCCGCCATGCAGGAGCAGGGGGAGGCACCGGGCGGGCGGCTACATCCAACGGCTCTTTaGAAGAATCAGAGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GAARPAMQEQGEAPGGRLHPTAL*KNQSLC Trigger: ACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATG...TAGCCGCCCGCCCGGTGCCTCCCCCTGCTCCTGCATGGCGGGACGGGCAGCGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120544.9 |
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| CDS-3UTR GCA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGATCCTCCAGGGCCTaGTTGCAGAGTGGCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRPGRSSKSQTCPARRPPRSSRA*LQSGTA Trigger: GGCGGTGCCACTCTGCAAGCAGGCCCTGGAGGATCT...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR GCA 90 bp | GCCAACACTGACCCGACAGAGGGGAGGTCTACAGAGCCCCGTGGGAAGCAACTCAGATCCTCCAGGGCCTaGTTGCAGAGTGGCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ANTDPTEGRSTEPRGKQLRSSRA*LQSGTA Trigger: GGCGGTGCCACTCTGCAAGCAGGCCCTGGAGGATCT...GAGTTGCTTCCCACGGGGCTCTGTAGACCTCCCCTCTGTCGGGTCAGTGTTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| CDS-3UTR GCA 90 bp | ACAGCACTGGAGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCATGCAGGAGCAGGCTTGTACAGCGTTTCTaGCTGCTTGAACTTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TALEGPQEALPVPPCRSRLVQRF*LLELPL Trigger: CAAGGGAAGTTCAAGCAGGCAGAAACGCTGTACAAG...CCTGCTCCTGCATGGCGGGACGGGCAGCGCCTCCTGCGGCCCCTCCAGTGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR GCA 90 bp | GACAGCGGAGGGACAGCACTGGAGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCATTCTTCCAATGTCTCTaGAGCTTCAAACTTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSGGTALEGPQEALPVPPFFQCL*SFKLPL Trigger: CAGGGGAAGTTTGAAGCTGCAGAGACATTGGAAGAA...TGGCGGGACGGGCAGCGCCTCCTGCGGCCCCTCCAGTGCTGTCCCTCCGCTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR CCA 90 bp | CCCCTAGGGCTGCTAGACAGCGGAGGGACAGCACTGGAGGGGCCGCAGGAGGCGGCTTACGTGACCTCATaGCGGCTTCTTCCAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLGLLDSGGTALEGPQEAAYVTS*RLLPMS Trigger: AGACATTGGAAGAAGCCGCCATGAGGTCACGTAAGC...CGCCTCCTGCGGCCCCTCCAGTGCTGTCCCTCCGCTGTCTAGCAGCCCTAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGGCTCGTGTGCGCGGGTaGGAATCTCCTTGTACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRARVRG*ESPCTA Trigger: CGCTGTACAAGGAGATTCTCACCCGCGCACACGAGC...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR GCA 90 bp | CAAATCTACGTCAGTGTGTCCTGGGGAGGCCCCGCGCAGGGCACCGGCCAGGTCACCCGTCCTTCTGCTTaGCTTTGCACTCCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QIYVSVSWGGPAQGTGQVTRPSA*LCTPLS Trigger: AGAGAGAGGAGTGCAAAGGCAAGCAGAAGGACGGGT...GACCTGGCCGGTGCCCTGCGCGGGGCCTCCCCAGGACACACTGACGTAGATTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR TCA 90 bp | CGTCCACCGCCAACACTGACCCGACAGAGGGGAGGTCTACAGAGCCCCGTGGGACTCGTAACGCCCCTGTaGAGCATACTGGATCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: RPPPTLTRQRGGLQSPVGLVTPL*SILDHQ Trigger: TTGGTGATCCAGTATGCTTCACAGGGGCGTTACGAG...TCCCACGGGGCTCTGTAGACCTCCCCTCTGTCGGGTCAGTGTTGGCGGTGGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| CDS-3UTR TCA 90 bp | GCTGACACGCCCCTAGGGCTGCTAGACAGCGGAGGGACAGCACTGGAGGGGCCGTTGGCAACATCAGGATaGTCCTTTCCCAGAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ADTPLGLLDSGGTALEGPLATSG*SFPRTF Trigger: GAAGGTTCTGGGAAAGGATCATCCTGATGTTGCCAA...CGGCCCCTCCAGTGCTGTCCCTCCGCTGTCTAGCAGCCCTAGGGGCGTGTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | TACGTCAGTGTGTCCTGGGGAGGCCCCGCGCAGGGCACCGGCCAGGTCTCTAAGTGCAGGATGGAGTTGTaGTCATTCTTCAGGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YVSVSWGGPAQGTGQVSKCRMEL*SFFRAS Trigger: GGAAGCCCTGAAGAATGAGCACAACTCCATCCTGCA...CTTAGAGACCTGGCCGGTGCCCTGCGCGGGGCCTCCCCAGGACACACTGACGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR GCA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCCCAAGTTGTGGAGCGTaGGCAGCCTTGCAGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: KRPGRSSKSQTCPARRPPPSCGA*AALQGS Trigger: AGATCCCTGCAAGGCTGCGCACGCTCCACAACTTGG...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGCCAAGTTGTGGAGCGTaGGCAGCCTTGCAGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRPSCGA*AALQGS Trigger: AGATCCCTGCAAGGCTGCGCACGCTCCACAACTTGG...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR GCA 90 bp | TCTACGTCAGTGTGTCCTGGGGAGGCCCCGCGCAGGGCACCGGCCAGGTCTCTATCCTCCGCTTCTCCATaGTCTCAGGGTCATTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: STSVCPGEAPRRAPARSLSSASP*SQGHLA Trigger: TGCTAAATGACCCTGAGAGCATGGAGAAGCGGAGGA...TAGAGACCTGGCCGGTGCCCTGCGCGGGGCCTCCCCAGGACACACTGACGTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR TCA 90 bp | AATCTACGTCAGTGTGTCCTGGGGAGGCCCCGCGCAGGGCACCGGCCAGGTCTCTTGGCAACATCAGGATaGTCCTTTCCCAGAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NLRQCVLGRPRAGHRPGLLATSG*SFPRTF Trigger: GAAGGTTCTGGGAAAGGATCATCCTGATGTTGCCAA...GAGACCTGGCCGGTGCCCTGCGCGGGGCCTCCCCAGGACACACTGACGTAGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR GCA 90 bp | GAGGCTGCCAGGCACCTTTTAAGCAAAGCCTACAGGCTGTGGACATCCCCATCTCCTCCAGGGCCTGCTTaGAGAGTGGCACCGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: EAARHLLSKAYRLWTSPSPPGPA*RVAPPP Trigger: AGGTGGCGGTGCCACTCTGCAAGCAGGCCCTGGAGG...AGATGGGGATGTCCACAGCCTGTAGGCTTTGCTTAAAAGGTGCCTGGCAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | GGTGAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGGGTCACGTTGCCGACCCGTCCTTCTaGTTGCCTTTGCACTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GECCLCSQMAQRLSQGHVADPSF*LPLHSS Trigger: AGAGGAGTGCAAAGGCAAGCAGAAGGACGGGTCGGC...AACGTGACCCTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
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| CDS-3UTR CCA 90 bp | CACTGGAGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCATGCAGGAGCAGGGGGAGGTTATTTAACTGTTTaGCAACATCAGGATGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HWRGRRRRCPSRHAGAGGGYLTV*QHQDDP Trigger: AGGATCATCCTGATGTTGCCAAACAGTTAAATAACC...TCCCCCTGCTCCTGCATGGCGGGACGGGCAGCGCCTCCTGCGGCCCCTCCAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR CCA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCCAGCGTGCATCCAGATaGGCTTGTTCTCGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRPGRSSKSQTCPARRPPQRASR*ACSRRP Trigger: TGGACGACGAGAACAAGCCCATCTGGATGCACGCTG...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR CCA 90 bp | GTGGTGAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGGGTCACGCAGCGTGCATCCAGATaGGCTTGTTCTCGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVSAACAHRWPSDSARVTQRASR*ACSRRP Trigger: TGGACGACGAGAACAAGCCCATCTGGATGCACGCTG...CGTGACCCTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTCACCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
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| CDS-3UTR TCA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCCTCGTAACGCCCCTGTaGAGCATACTGGATCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: KRPGRSSKSQTCPARRPPLVTPL*SILDHQ Trigger: TTGGTGATCCAGTATGCTTCACAGGGGCGTTACGAG...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR GCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGTTCTGCAACTTCTGCTaGGTGTTGGCCAGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRFCNFC*VLASSS Trigger: GGATGAGCTGGCCAACACGCAGCAGAAGTTGCAGAA...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR GCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGCTCTTCTGCAACTTCTaGTGCGTGTTGGCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRLFCNF*CVLASS Trigger: TGAGCTGGCCAACACGCAGCAGAAGTTGCAGAAGAG...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR GCA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCGACTGCTCGCTCTTCTaGAACTTCTGCTGCGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRPGRSSKSQTCPARRPPDCSLF*NFCCVL Trigger: CAACACGCAGCAGAAGTTGCAGAAGAGCGAGCAGTC...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR GCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGGACTGCTCGCTCTTCTaGAACTTCTGCTGCGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRDCSLF*NFCCVL Trigger: CAACACGCAGCAGAAGTTGCAGAAGAGCGAGCAGTC...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR GCA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCGCACTACTGTGCTGCTaGTGGATTCCTTGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KRPGRSSKSQTCPARRPPALLCC*WIPCPG Trigger: ACCAGGACAAGGAATCCAGCAGCAGCACAGTAGTGC...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR GCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGGCACTACTGTGCTGCTaGTGGATTCCTTGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRALLCC*WIPCPG Trigger: ACCAGGACAAGGAATCCAGCAGCAGCACAGTAGTGC...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR GCA 90 bp | TTTCCACACCAAGACTACACAGCAAATCTACGTCAGTGTGTCCTGGGGAGGCCCGAGCGTGCGCAGCCTTaGAGGGATCTCGTAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FPHQDYTANLRQCVLGRPERAQP*RDLVAA Trigger: GGCGGCTACGAGATCCCTGCAAGGCTGCGCACGCTC...GGGCCTCCCCAGGACACACTGACGTAGATTTGCTGTGTAGTCTTGGTGTGGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR GCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGACCCGTCCTTCTGCTTaGCTTTGCACTCCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRTRPSA*LCTPLS Trigger: AGAGAGAGGAGTGCAAAGGCAAGCAGAAGGACGGGT...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR GCA 90 bp | CGTGGTGAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGGGTCACACCCGTCCTTCTGCTTaGCTTTGCACTCCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGECCLCSQMAQRLSQGHTRPSA*LCTPLS Trigger: AGAGAGAGGAGTGCAAAGGCAAGCAGAAGGACGGGT...GTGACCCTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTCACCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
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| CDS-3UTR GCA 90 bp | GCCGACGTGGTGAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGGTCCTCCGCTTCTCCATaGTCTCAGGGTCATTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ADVVSAACAHRWPSDSARSSASP*SQGHLA Trigger: TGCTAAATGACCCTGAGAGCATGGAGAAGCGGAGGA...CCTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTCACCACGTCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
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| CDS-3UTR CCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGAGGGCTTCCAGCCCCTaGATCACTTGCTTGGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRRASSP*ITCLVL Trigger: TAAGACCAAGCAAGTGATCCAGGGGCTGGAAGCCCT...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR CCA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGGCTTCCAGCCCCTaGATCACTTGCTTGGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KRPGRSSKSQTCPARRPPRASSP*ITCLVL Trigger: TAAGACCAAGCAAGTGATCCAGGGGCTGGAAGCCCT...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR CCA 90 bp | GCTGACACGCCCCTAGGGCTGCTAGACAGCGGAGGGACAGCACTGGAGGGGCCGCATCCAACGGCTCTTTaGAAGAATCAGAGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ADTPLGLLDSGGTALEGPHPTAL*KNQSLC Trigger: ACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATG...CGGCCCCTCCAGTGCTGTCCCTCCGCTGTCTAGCAGCCCTAGGGGCGTGTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGCTACTGTGCTGCTGCTaGATTCCTTGTCCTGGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRLLCCC*IPCPGS Trigger: CGAACCAGGACAAGGAATCCAGCAGCAGCACAGTAG...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR CCA 90 bp | GCCAACACTGACCCGACAGAGGGGAGGTCTACAGAGCCCCGTGGGAAGCAACTCCTACTGTGCTGCTGCTaGATTCCTTGTCCTGGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ANTDPTEGRSTEPRGKQLLLCCC*IPCPGS Trigger: CGAACCAGGACAAGGAATCCAGCAGCAGCACAGTAG...GAGTTGCTTCCCACGGGGCTCTGTAGACCTCCCCTCTGTCGGGTCAGTGTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR TCA 90 bp | TGCACAGTGCTGACTGCATACAAGTTCCCAGAGTGCTCTGAAGCAGTGTCAGCTGCTGCCACCGCGGGGTaGTCTCTGCCCAGGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTVLTAYKFPECSEAVSAAATAG*SLPRVF Trigger: GAAAACCCTGGGCAGAGATCACCCCGCGGTGGCAGC...AGCTGACACTGCTTCAGAGCACTCTGGGAACTTGTATGCAGTCAGCACTGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCGCCACTCTCTGTTTGTaGACATTGTCAAGACCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRPGRSSKSQTCPARRPPATLCL*TLSRPC Trigger: GCAGGGTCTTGACAATGTTCACAAACAGAGAGTGGC...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084941.12 |
||
| CDS-3UTR TCA 90 bp | GACGTGGTGAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGGGTCGCCACTCTCTGTTTGTaGACATTGTCAAGACCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DVVSAACAHRWPSDSARVATLCL*TLSRPC Trigger: GCAGGGTCTTGACAATGTTCACAAACAGAGAGTGGC...GACCCTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTCACCACGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCTGCAGGATGGAGTTGTaGTCATTCTTCAGGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRPGRSSKSQTCPARRPPCRMEL*SFFRAS Trigger: GGAAGCCCTGAAGAATGAGCACAACTCCATCCTGCA...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGGTCTCCAGCAAACTCTaGAGGATGGAGTTGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRVSSKL*RMELCS Trigger: TGAGCACAACTCCATCCTGCAGAGTTTGCTGGAGAC...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGGCATCTCCAGGGACTTaGGGATCATGCTGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRASPGT*GSCWIS Trigger: AGAAATCCAGCATGATCCGCAAGTCCCTGGAGATGC...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | TGCACAGTGCTGACTGCATACAAGTTCCCAGAGTGCTCTGAAGCAGTGTCAGCTGAGCGTGCGCAGCCTTaGAGGGATCTCGTAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CTVLTAYKFPECSEAVSAERAQP*RDLVAA Trigger: GGCGGCTACGAGATCCCTGCAAGGCTGCGCACGCTC...AGCTGACACTGCTTCAGAGCACTCTGGGAACTTGTATGCAGTCAGCACTGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCCCCAGGCACAGATGCAGATCAAGCAACAGAATTCTGGGGTGAGGCTGCCCCAAGTTGTGGAGCGTaGGCAGCCTTGCAGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: KPPGTDADQATEFWGEAAPSCGA*AALQGS Trigger: AGATCCCTGCAAGGCTGCGCACGCTCCACAACTTGG...GGCAGCCTCACCCCAGAATTCTGTTGCTTGATCTGCATCTGTGCCTGGGGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | GGCCGACGTGGTGAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGCTTGTACAGCGTTTCTaGCTGCTTGAACTTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRRGECCLCSQMAQRLSQLVQRF*LLELPL Trigger: CAAGGGAAGTTCAAGCAGGCAGAAACGCTGTACAAG...CTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTCACCACGTCGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
||
| CDS-3UTR GCA 90 bp | CGACGTGGTGAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGGGTACATTGTCAAGACCCTaGTTACGTGACCTCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RRGECCLCSQMAQRLSQGTLSRP*LRDLMA Trigger: CGCCATGAGGTCACGTAAGCAGGGTCTTGACAATGT...ACCCTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTCACCACGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCTCCTCCGCTTCTCCATaGTCTCAGGGTCATTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRPGRSSKSQTCPARRPPSSASP*SQGHLA Trigger: TGCTAAATGACCCTGAGAGCATGGAGAAGCGGAGGA...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCGCTTACGTGACCTCATaGCGGCTTCTTCCAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRPGRSSKSQTCPARRPPAYVTS*RLLPMS Trigger: AGACATTGGAAGAAGCCGCCATGAGGTCACGTAAGC...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CCA 90 bp | CGACGTGGTGAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGGGTGCTTACGTGACCTCATaGCGGCTTCTTCCAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRGECCLCSQMAQRLSQGAYVTS*RLLPMS Trigger: AGACATTGGAAGAAGCCGCCATGAGGTCACGTAAGC...ACCCTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTCACCACGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
||
| CDS-3UTR TCA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCGCTGCCACCGCGGGGTaGTCTCTGCCCAGGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRHRTKHMRSATKRPGRSAATAG*SLPRVF Trigger: GAAAACCCTGGGCAGAGATCACCCCGCGGTGGCAGC...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGTTGGCAACATCAGGATaGTCCTTTCCCAGAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRLATSG*SFPRTF Trigger: GAAGGTTCTGGGAAAGGATCATCCTGATGTTGCCAA...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCGAGCGTGCGCAGCCTTaGAGGGATCTCGTAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TRHRTKHMRSATKRPGRSERAQP*RDLVAA Trigger: GGCGGCTACGAGATCCCTGCAAGGCTGCGCACGCTC...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGGGGTGAGGCTGCCAGGCACCTTTTAAGCAAAGCCTACAGGCTGTGGACAGCCGACCCGTCCTTCTaGTTGCCTTTGCACTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FWGEAARHLLSKAYRLWTADPSF*LPLHSS Trigger: AGAGGAGTGCAAAGGCAAGCAGAAGGACGGGTCGGC...TGTCCACAGCCTGTAGGCTTTGCTTAAAAGGTGCCTGGCAGCCTCACCCCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | GCCGACGTGGTGAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGGTTCTTCCAATGTCTCTaGAGCTTCAAACTTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ADVVSAACAHRWPSDSARFFQCL*SFKLPL Trigger: CAGGGGAAGTTTGAAGCTGCAGAGACATTGGAAGAA...CCTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTCACCACGTCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
||
| CDS-3UTR CCA 90 bp | AAGCCCCCAGGCACAGATGCAGATCAAGCAACAGAATTCTGGGGTGAGGCTGCCCTAGGTCAGTGTGGCTaGCGCTCAGTGTTCTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KPPGTDADQATEFWGEAALGQCG*RSVFSS Trigger: ACTCGAGAACACTGAGCGCCAGCCACACTGACCTAG...GGCAGCCTCACCCCAGAATTCTGTTGCTTGATCTGCATCTGTGCCTGGGGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGTCTTCAGCTGGTTCATaGACTCCAGGTGTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRSSAGS*TPGVSS Trigger: AGAAGAAACACCTGGAGTTCATGAACCAGCTGAAGA...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR TCA 90 bp | GGACAGCCGAGCCCTGCTTTTCTCCTAAGGACATTAAGTGCAACAGAACCTTGCGCTCGTGTGCGCGGGTaGGAATCTCCTTGTACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GQPSPAFLLRTLSATEPCARVRG*ESPCTA Trigger: CGCTGTACAAGGAGATTCTCACCCGCGCACACGAGC...GCAAGGTTCTGTTGCACTTAATGTCCTTAGGAGAAAAGCAGGGCTCGGCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCCCCAGGCACAGATGCAGATCAAGCAACAGAATTCTGGGGTGAGGCTGCCGACTGCTCGCTCTTCTaGAACTTCTGCTGCGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPPGTDADQATEFWGEAADCSLF*NFCCVL Trigger: CAACACGCAGCAGAAGTTGCAGAAGAGCGAGCAGTC...GGCAGCCTCACCCCAGAATTCTGTTGCTTGATCTGCATCTGTGCCTGGGGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | CACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCAAGAGATCCTCCAGGGCCTaGTTGCAGAGTGGCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HRTKHMRSATKRPGRSSKRSSRA*LQSGTA Trigger: GGCGGTGCCACTCTGCAAGCAGGCCCTGGAGGATCT...CTTGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR GCA 90 bp | CTGGCAAAGCTACATGTATCCAGAAATCAAGAACCCAAAAGGACGGCAGCACCGAGATCCTCCAGGGCCTaGTTGCAGAGTGGCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAKLHVSRNQEPKRTAAPRSSRA*LQSGTA Trigger: GGCGGTGCCACTCTGCAAGCAGGCCCTGGAGGATCT...CGGTGCTGCCGTCCTTTTGGGTTCTTGATTTCTGGATACATGTAGCTTTGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGTACAGCGTTTCTGCCTaGTTGAACTTCCCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRYSVSA*LNFPCF Trigger: GAAACAAGGGAAGTTCAAGCAGGCAGAAACGCTGTA...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCTACAGCGTTTCTGCCTaGTTGAACTTCCCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KRPGRSSKSQTCPARRPPYSVSA*LNFPCF Trigger: GAAACAAGGGAAGTTCAAGCAGGCAGAAACGCTGTA...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCTTCTTCCAATGTCTCTaGAGCTTCAAACTTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRPGRSSKSQTCPARRPPFFQCL*SFKLPL Trigger: CAGGGGAAGTTTGAAGCTGCAGAGACATTGGAAGAA...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR GCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGTTCTTCCAATGTCTCTaGAGCTTCAAACTTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRFFQCL*SFKLPL Trigger: CAGGGGAAGTTTGAAGCTGCAGAGACATTGGAAGAA...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCGCTTTAAAGATCCAGTaGCATCCCCATTCCACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KRPGRSSKSQTCPARRPPALKIQ*HPHSTL Trigger: TAGAGTGGAATGGGGATGGCACTGGATCTTTAAAGC...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR CCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGTCGTACTTCTTCAGCTaGTTCATGAACTCCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRSYFFS*FMNSRC Trigger: ACACCTGGAGTTCATGAACCAGCTGAAGAAGTACGA...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CCA 90 bp | AATCTACGTCAGTGTGTCCTGGGGAGGCCCCGCGCAGGGCACCGGCCAGGTCTCGGTTATTTAACTGTTTaGCAACATCAGGATGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLRQCVLGRPRAGHRPGLGYLTV*QHQDDP Trigger: AGGATCATCCTGATGTTGCCAAACAGTTAAATAACC...GAGACCTGGCCGGTGCCCTGCGCGGGGCCTCCCCAGGACACACTGACGTAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR TCA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCGCTCGTGTGCGCGGGTaGGAATCTCCTTGTACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TRHRTKHMRSATKRPGRSARVRG*ESPCTA Trigger: CGCTGTACAAGGAGATTCTCACCCGCGCACACGAGC...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCCCCAGGCACAGATGCAGATCAAGCAACAGAATTCTGGGGTGAGGCTGCCGGGACTTGCGGATCATaGTGGATTTCTCTTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KPPGTDADQATEFWGEAAGTCGS*WISLPP Trigger: TGGTGGAAGAGAAATCCAGCATGATCCGCAAGTCCC...GGCAGCCTCACCCCAGAATTCTGTTGCTTGATCTGCATCTGTGCCTGGGGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | CGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCGCCGACCCGTCCTTCTaGTTGCCTTTGCACTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHRTKHMRSATKRPGRSSADPSF*LPLHSS Trigger: AGAGGAGTGCAAAGGCAAGCAGAAGGACGGGTCGGC...GCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGCATCCAACGGCTCTTTaGAAGAATCAGAGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRHPTAL*KNQSLC Trigger: ACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATG...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR CCA 90 bp | AAGCCCCCAGGCACAGATGCAGATCAAGCAACAGAATTCTGGGGTGAGGCTGCCGCTTACGTGACCTCATaGCGGCTTCTTCCAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPPGTDADQATEFWGEAAAYVTS*RLLPMS Trigger: AGACATTGGAAGAAGCCGCCATGAGGTCACGTAAGC...GGCAGCCTCACCCCAGAATTCTGTTGCTTGATCTGCATCTGTGCCTGGGGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGCAAAGCTACATGTATCCAGAAATCAAGAACCCAAAAGGACGGCAGCACCGCTCGTGTGCGCGGGTaGGAATCTCCTTGTACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SGKATCIQKSRTQKDGSTARVRG*ESPCTA Trigger: CGCTGTACAAGGAGATTCTCACCCGCGCACACGAGC...GGTGCTGCCGTCCTTTTGGGTTCTTGATTTCTGGATACATGTAGCTTTGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR TCA 90 bp | TTTCCATGGCTTCTGAGGCACTCGCACTGGTATGGCCTGCTGAACCATCTCTCCGCCACTCTCTGTTTGTaGACATTGTCAAGACCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPWLLRHSHWYGLLNHLSATLCL*TLSRPC Trigger: GCAGGGTCTTGACAATGTTCACAAACAGAGAGTGGC...GGAGAGATGGTTCAGCAGGCCATACCAGTGCGAGTGCCTCAGAAGCCATGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGGGGTGAGGCTGCCAGGCACCTTTTAAGCAAAGCCTACAGGCTGTGGACATGCAGGATGGAGTTGTaGTCATTCTTCAGGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FWGEAARHLLSKAYRLWTCRMEL*SFFRAS Trigger: GGAAGCCCTGAAGAATGAGCACAACTCCATCCTGCA...TGTCCACAGCCTGTAGGCTTTGCTTAAAAGGTGCCTGGCAGCCTCACCCCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | CATGAGGAACTGAGGAACATGGTGAAAGGGACAGCCGAGCCCTGCTTTTCTCCTTTCTGCAACTTCTGCTaGGTGTTGGCCAGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HEELRNMVKGTAEPCFSPFCNFC*VLASSS Trigger: GGATGAGCTGGCCAACACGCAGCAGAAGTTGCAGAA...AGGAGAAAAGCAGGGCTCGGCTGTCCCTTTCACCATGTTCCTCAGTTCCTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | GTGAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGGGTCACGTTATACAGCGTTTCTGCCTaGTTGAACTTCCCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSAACAHRWPSDSARVTLYSVSA*LNFPCF Trigger: GAAACAAGGGAAGTTCAAGCAGGCAGAAACGCTGTA...TAACGTGACCCTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
||
| CDS-3UTR CCA 90 bp | AAGCCCCCAGGCACAGATGCAGATCAAGCAACAGAATTCTGGGGTGAGGCTGCCTTCGTCCTCGTCATTTaGGAAGAGATCATCCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: KPPGTDADQATEFWGEAAFVLVI*EEIIQR Trigger: CCGTTGGATGATCTCTTCCCAAATGACGAGGACGAA...GGCAGCCTCACCCCAGAATTCTGTTGCTTGATCTGCATCTGTGCCTGGGGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CCA 90 bp | CGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCCAGCGTGCATCCAGATaGGCTTGTTCTCGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHRTKHMRSATKRPGRSSQRASR*ACSRRP Trigger: TGGACGACGAGAACAAGCCCATCTGGATGCACGCTG...GCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CCA 90 bp | CTCCGTAACATCTCTAGCAGCATCCCAGGAGACTTCTATCTGAGCATCTGCGCTCAGCGTGCATCCAGATaGGCTTGTTCTCGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRNISSSIPGDFYLSICAQRASR*ACSRRP Trigger: TGGACGACGAGAACAAGCCCATCTGGATGCACGCTG...AGCGCAGATGCTCAGATAGAAGTCTCCTGGGATGCTGCTAGAGATGTTACGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR TCA 90 bp | CGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCTCCACAGCATTCAGGTaGTTGGACAGCGCCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: RHRTKHMRSATKRPGRSSSTAFR*LDSAII Trigger: GATGATGGCGCTGTCCAATCACCTGAATGCTGTGGA...GCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCACACCAAGACTACACAGCAAATCTACGTCAGTGTGTCCTGGGGAGGCCCGCCACTCTCTGTTTGTaGACATTGTCAAGACCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPHQDYTANLRQCVLGRPATLCL*TLSRPC Trigger: GCAGGGTCTTGACAATGTTCACAAACAGAGAGTGGC...GGGCCTCCCCAGGACACACTGACGTAGATTTGCTGTGTAGTCTTGGTGTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | CATGAGGAACTGAGGAACATGGTGAAAGGGACAGCCGAGCCCTGCTTTTCTCCTGCATCTCCAGGGACTTaGGGATCATGCTGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HEELRNMVKGTAEPCFSPASPGT*GSCWIS Trigger: AGAAATCCAGCATGATCCGCAAGTCCCTGGAGATGC...AGGAGAAAAGCAGGGCTCGGCTGTCCCTTTCACCATGTTCCTCAGTTCCTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | CACCATGAGGAACTGAGGAACATGGTGAAAGGGACAGCCGAGCCCTGCTTTTCTTCCTCCGCTTCTCCATaGTCTCAGGGTCATTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HHEELRNMVKGTAEPCFSSSASP*SQGHLA Trigger: TGCTAAATGACCCTGAGAGCATGGAGAAGCGGAGGA...AGAAAAGCAGGGCTCGGCTGTCCCTTTCACCATGTTCCTCAGTTCCTCATGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CCA 90 bp | TGCACAGTGCTGACTGCATACAAGTTCCCAGAGTGCTCTGAAGCAGTGTCAGCTAGGGCTTCCAGCCCCTaGATCACTTGCTTGGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CTVLTAYKFPECSEAVSARASSP*ITCLVL Trigger: TAAGACCAAGCAAGTGATCCAGGGGCTGGAAGCCCT...AGCTGACACTGCTTCAGAGCACTCTGGGAACTTGTATGCAGTCAGCACTGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGGGTTATTTAACTGTTTaGCAACATCAGGATGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QAEAARARRVLLVGLPGRGYLTV*QHQDDP Trigger: AGGATCATCCTGATGTTGCCAAACAGTTAAATAACC...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR TCA 90 bp | CACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCAAGCTCGTAACGCCCCTGTaGAGCATACTGGATCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: HRTKHMRSATKRPGRSSKLVTPL*SILDHQ Trigger: TTGGTGATCCAGTATGCTTCACAGGGGCGTTACGAG...CTTGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | CGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCGAGATGATCTCATCCTaGGTGAGCTTCTCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RHRTKHMRSATKRPGRSSEMISS*VSFSSF Trigger: GAAGCTGGAGAAGCTCACGCAGGATGAGATCATCTC...GCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCAAAGCTACATGTATCCAGAAATCAAGAACCCAAAAGGACGGCAGCACCGTTCTGCAACTTCTGCTaGGTGTTGGCCAGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LAKLHVSRNQEPKRTAAPFCNFC*VLASSS Trigger: GGATGAGCTGGCCAACACGCAGCAGAAGTTGCAGAA...CGGTGCTGCCGTCCTTTTGGGTTCTTGATTTCTGGATACATGTAGCTTTGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCCTCTTCTGCAACTTCTaGTGCGTGTTGGCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TRHRTKHMRSATKRPGRSLFCNF*CVLASS Trigger: TGAGCTGGCCAACACGCAGCAGAAGTTGCAGAAGAG...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | CGTAACATCTCTAGCAGCATCCCAGGAGACTTCTATCTGAGCATCTGCGCTCTTGCACTACTGTGCTGCTaGTGGATTCCTTGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RNISSSIPGDFYLSICALALLCC*WIPCPG Trigger: ACCAGGACAAGGAATCCAGCAGCAGCACAGTAGTGC...AAGAGCGCAGATGCTCAGATAGAAGTCTCCTGGGATGCTGCTAGAGATGTTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | CACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCAAGACCCGTCCTTCTGCTTaGCTTTGCACTCCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRTKHMRSATKRPGRSSKTRPSA*LCTPLS Trigger: AGAGAGAGGAGTGCAAAGGCAAGCAGAAGGACGGGT...CTTGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGGGGTGAGGCTGCCAGGCACCTTTTAAGCAAAGCCTACAGGCTGTGGACATTCTTCCAATGTCTCTaGAGCTTCAAACTTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FWGEAARHLLSKAYRLWTFFQCL*SFKLPL Trigger: CAGGGGAAGTTTGAAGCTGCAGAGACATTGGAAGAA...TGTCCACAGCCTGTAGGCTTTGCTTAAAAGGTGCCTGGCAGCCTCACCCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CCA 90 bp | CTCCGTAACATCTCTAGCAGCATCCCAGGAGACTTCTATCTGAGCATCTGCGCTCAGCATTCAGGTGATTaGACAGCGCCATCATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LRNISSSIPGDFYLSICAQHSGD*TAPSSP Trigger: AGGTGATGATGGCGCTGTCCAATCACCTGAATGCTG...AGCGCAGATGCTCAGATAGAAGTCTCCTGGGATGCTGCTAGAGATGTTACGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR TCA 90 bp | TACAGGCTGTGGACATCCCCATCTACAGAAAGTCCACTACAACCAAGAGGACAATCCACAGCATTCAGGTaGTTGGACAGCGCCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: YRLWTSPSTESPLQPRGQSTAFR*LDSAII Trigger: GATGATGGCGCTGTCCAATCACCTGAATGCTGTGGA...TTGTCCTCTTGGTTGTAGTGGACTTTCTGTAGATGGGGATGTCCACAGCCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR TCA 90 bp | TGCACAGTGCTGACTGCATACAAGTTCCCAGAGTGCTCTGAAGCAGTGTCAGCTTTGGCAACATCAGGATaGTCCTTTCCCAGAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTVLTAYKFPECSEAVSALATSG*SFPRTF Trigger: GAAGGTTCTGGGAAAGGATCATCCTGATGTTGCCAA...AGCTGACACTGCTTCAGAGCACTCTGGGAACTTGTATGCAGTCAGCACTGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | CACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCAAGGAGATGATCTCATCCTaGGTGAGCTTCTCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRTKHMRSATKRPGRSSKEMISS*VSFSSF Trigger: GAAGCTGGAGAAGCTCACGCAGGATGAGATCATCTC...CTTGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCGGGACTTGCGGATCATaGTGGATTTCTCTTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TRHRTKHMRSATKRPGRSGTCGS*WISLPP Trigger: TGGTGGAAGAGAAATCCAGCATGATCCGCAAGTCCC...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCGCATCTCCAGGGACTTaGGGATCATGCTGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRHRTKHMRSATKRPGRSASPGT*GSCWIS Trigger: AGAAATCCAGCATGATCCGCAAGTCCCTGGAGATGC...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | TACAGGCTGTGGACATCCCCATCTACAGAAAGTCCACTACAACCAAGAGGACAACTCTTCTGCAACTTCTaGTGCGTGTTGGCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YRLWTSPSTESPLQPRGQLFCNF*CVLASS Trigger: TGAGCTGGCCAACACGCAGCAGAAGTTGCAGAAGAG...TTGTCCTCTTGGTTGTAGTGGACTTTCTGTAGATGGGGATGTCCACAGCCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCTACATGTATCCAGAAATCAAGAACCCAAAAGGACGGCAGCACCGCAAGGGCACTACTGTGCTGCTaGTGGATTCCTTGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KATCIQKSRTQKDGSTARALLCC*WIPCPG Trigger: ACCAGGACAAGGAATCCAGCAGCAGCACAGTAGTGC...CCTTGCGGTGCTGCCGTCCTTTTGGGTTCTTGATTTCTGGATACATGTAGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | CACCATGAGGAACTGAGGAACATGGTGAAAGGGACAGCCGAGCCCTGCTTTTCTTACAGCGTTTCTGCCTaGTTGAACTTCCCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HHEELRNMVKGTAEPCFSYSVSA*LNFPCF Trigger: GAAACAAGGGAAGTTCAAGCAGGCAGAAACGCTGTA...AGAAAAGCAGGGCTCGGCTGTCCCTTTCACCATGTTCCTCAGTTCCTCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | CGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCCTTGTACAGCGTTTCTaGCTGCTTGAACTTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RHRTKHMRSATKRPGRSSLVQRF*LLELPL Trigger: CAAGGGAAGTTCAAGCAGGCAGAAACGCTGTACAAG...GCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | TGCACAGTGCTGACTGCATACAAGTTCCCAGAGTGCTCTGAAGCAGTGTCAGCTCTTGTACAGCGTTTCTaGCTGCTTGAACTTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CTVLTAYKFPECSEAVSALVQRF*LLELPL Trigger: CAAGGGAAGTTCAAGCAGGCAGAAACGCTGTACAAG...AGCTGACACTGCTTCAGAGCACTCTGGGAACTTGTATGCAGTCAGCACTGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | CACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCAAGACATTGTCAAGACCCTaGTTACGTGACCTCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HRTKHMRSATKRPGRSSKTLSRP*LRDLMA Trigger: CGCCATGAGGTCACGTAAGCAGGGTCTTGACAATGT...CTTGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084941.12 |
||
| CDS-3UTR GCA 90 bp | TGGCAAAGCTACATGTATCCAGAAATCAAGAACCCAAAAGGACGGCAGCACCGCACATTGTCAAGACCCTaGTTACGTGACCTCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WQSYMYPEIKNPKGRQHRTLSRP*LRDLMA Trigger: CGCCATGAGGTCACGTAAGCAGGGTCTTGACAATGT...GCGGTGCTGCCGTCCTTTTGGGTTCTTGATTTCTGGATACATGTAGCTTTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | CATGAGGAACTGAGGAACATGGTGAAAGGGACAGCCGAGCCCTGCTTTTCTCCTGCTTTAAAGATCCAGTaGCATCCCCATTCCACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HEELRNMVKGTAEPCFSPALKIQ*HPHSTL Trigger: TAGAGTGGAATGGGGATGGCACTGGATCTTTAAAGC...AGGAGAAAAGCAGGGCTCGGCTGTCCCTTTCACCATGTTCCTCAGTTCCTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CCA 90 bp | CACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCAAGCAGCATTCAGGTGATTaGACAGCGCCATCATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HRTKHMRSATKRPGRSSKQHSGD*TAPSSP Trigger: AGGTGATGATGGCGCTGTCCAATCACCTGAATGCTG...CTTGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CCA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCCAGCATTCAGGTGATTaGACAGCGCCATCATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TRHRTKHMRSATKRPGRSQHSGD*TAPSSP Trigger: AGGTGATGATGGCGCTGTCCAATCACCTGAATGCTG...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CCA 90 bp | CGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCTTCGTCCTCGTCATTTaGGAAGAGATCATCCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: RHRTKHMRSATKRPGRSSFVLVI*EEIIQR Trigger: CCGTTGGATGATCTCTTCCCAAATGACGAGGACGAA...GCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CCA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCGCTTACGTGACCTCATaGCGGCTTCTTCCAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRHRTKHMRSATKRPGRSAYVTS*RLLPMS Trigger: AGACATTGGAAGAAGCCGCCATGAGGTCACGTAAGC...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR TCA 90 bp | CACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCAAGTTGGCAACATCAGGATaGTCCTTTCCCAGAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRTKHMRSATKRPGRSSKLATSG*SFPRTF Trigger: GAAGGTTCTGGGAAAGGATCATCCTGATGTTGCCAA...CTTGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCTACATGTATCCAGAAATCAAGAACCCAAAAGGACGGCAGCACCGCAAGGGTCTCCAGCAAACTCTaGAGGATGGAGTTGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KATCIQKSRTQKDGSTARVSSKL*RMELCS Trigger: TGAGCACAACTCCATCCTGCAGAGTTTGCTGGAGAC...CCTTGCGGTGCTGCCGTCCTTTTGGGTTCTTGATTTCTGGATACATGTAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCCTTGTACAGCGTTTCTaGCTGCTTGAACTTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRHRTKHMRSATKRPGRSLVQRF*LLELPL Trigger: CAAGGGAAGTTCAAGCAGGCAGAAACGCTGTACAAG...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CCA 90 bp | AGCTACATGTATCCAGAAATCAAGAACCCAAAAGGACGGCAGCACCGCAAGGAACAGCATTCAGGTGATTaGACAGCGCCATCATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SYMYPEIKNPKGRQHRKEQHSGD*TAPSSP Trigger: AGGTGATGATGGCGCTGTCCAATCACCTGAATGCTG...TTCCTTGCGGTGCTGCCGTCCTTTTGGGTTCTTGATTTCTGGATACATGTAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | CTCCGTAACATCTCTAGCAGCATCCCAGGAGACTTCTATCTGAGCATCTGCGCTTCGTACTTCTTCAGCTaGTTCATGAACTCCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRNISSSIPGDFYLSICASYFFS*FMNSRC Trigger: ACACCTGGAGTTCATGAACCAGCTGAAGAAGTACGA...AGCGCAGATGCTCAGATAGAAGTCTCCTGGGATGCTGCTAGAGATGTTACGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CCA 90 bp | TGGCAAAGCTACATGTATCCAGAAATCAAGAACCCAAAAGGACGGCAGCACCGCTTCGTCCTCGTCATTTaGGAAGAGATCATCCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: WQSYMYPEIKNPKGRQHRFVLVI*EEIIQR Trigger: CCGTTGGATGATCTCTTCCCAAATGACGAGGACGAA...GCGGTGCTGCCGTCCTTTTGGGTTCTTGATTTCTGGATACATGTAGCTTTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCTTCGTCCTCGTCATTTaGGAAGAGATCATCCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: TRHRTKHMRSATKRPGRSFVLVI*EEIIQR Trigger: CCGTTGGATGATCTCTTCCCAAATGACGAGGACGAA...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGGCCTGTCTTCAAGGTGAACAGCTACTCTCTCTTAACTGTTAAACTTGTTCCAAGTTGTGGAGCGTaGGCAGCCTTGCAGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LRPVFKVNSYSLLTVKLVPSCGA*AALQGS Trigger: AGATCCCTGCAAGGCTGCGCACGCTCCACAACTTGG...AACAAGTTTAACAGTTAAGAGAGAGTAGCTGTTCACCTTGAAGACAGGCCTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | CACGGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACACCAAGGCCGACCCGTCCTTCTaGTTGCCTTTGCACTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HGALQISREKQNSNFHTKADPSF*LPLHSS Trigger: AGAGGAGTGCAAAGGCAAGCAGAAGGACGGGTCGGC...CTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | CTGGCAAAGCTACATGTATCCAGAAATCAAGAACCCAAAAGGACGGCAGCACCGTTCTTCCAATGTCTCTaGAGCTTCAAACTTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAKLHVSRNQEPKRTAAPFFQCL*SFKLPL Trigger: CAGGGGAAGTTTGAAGCTGCAGAGACATTGGAAGAA...CGGTGCTGCCGTCCTTTTGGGTTCTTGATTTCTGGATACATGTAGCTTTGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCTCGTACTTCTTCAGCTaGTTCATGAACTCCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TRHRTKHMRSATKRPGRSSYFFS*FMNSRC Trigger: ACACCTGGAGTTCATGAACCAGCTGAAGAAGTACGA...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR GCA 90 bp | CTGCGTGACACTAAGGCCTGTCTTCAAGGTGAACAGCTACTCTCTCTTAACTGTTACAGCGTTTCTGCCTaGTTGAACTTCCCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRDTKACLQGEQLLSLNCYSVSA*LNFPCF Trigger: GAAACAAGGGAAGTTCAAGCAGGCAGAAACGCTGTA...ACAGTTAAGAGAGAGTAGCTGTTCACCTTGAAGACAGGCCTTAGTGTCACGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | CGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCCCTTTATGTACACCATaGTGGACATGTTGTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: RHRTKHMRSATKRPGRSSPLCTP*WTCCHT Trigger: TGTATGACAACATGTCCACCATGGTGTACATAAAGG...GCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CCA 90 bp | GGACAGCCGAGCCCTGCTTTTCTCCTAAGGACATTAAGTGCAACAGAACCTTGCCCTTTATGTACACCATaGTGGACATGTTGTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: GQPSPAFLLRTLSATEPCPLCTP*WTCCHT Trigger: TGTATGACAACATGTCCACCATGGTGTACATAAAGG...GCAAGGTTCTGTTGCACTTAATGTCCTTAGGAGAAAAGCAGGGCTCGGCTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CCA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCCATCCAACGGCTCTTTaGAAGAATCAGAGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TRHRTKHMRSATKRPGRSHPTAL*KNQSLC Trigger: ACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATG...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGAGTGAGTTTATTAGAAGTTAGAAAGACACATACACACATCACGGAGCACTCCACAGCATTCAGGTaGTTGGACAGCGCCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: VGVSLLEVRKTHTHITEHSTAFR*LDSAII Trigger: GATGATGGCGCTGTCCAATCACCTGAATGCTGTGGA...GTGCTCCGTGATGTGTGTATGTGTCTTTCTAACTTCTAATAAACTCACTCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | GTATTGAAAATTAGAAGACAGTTCCCAGAGGCACTTAGAATCTATGCCCAAAGGACCCGTCCTTCTGCTTaGCTTTGCACTCCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLKIRRQFPEALRIYAQRTRPSA*LCTPLS Trigger: AGAGAGAGGAGTGCAAAGGCAAGCAGAAGGACGGGT...CCTTTGGGCATAGATTCTAAGTGCCTCTGGGAACTGTCTTCTAATTTTCAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CCA 90 bp | TGGCAAAGCTACATGTATCCAGAAATCAAGAACCCAAAAGGACGGCAGCACCGCCCTTTATGTACACCATaGTGGACATGTTGTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: WQSYMYPEIKNPKGRQHRPLCTP*WTCCHT Trigger: TGTATGACAACATGTCCACCATGGTGTACATAAAGG...GCGGTGCTGCCGTCCTTTTGGGTTCTTGATTTCTGGATACATGTAGCTTTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCCCTTTATGTACACCATaGTGGACATGTTGTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: TRHRTKHMRSATKRPGRSPLCTP*WTCCHT Trigger: TGTATGACAACATGTCCACCATGGTGTACATAAAGG...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CCA 90 bp | CACGGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACACCAAGAGGGCTTCCAGCCCCTaGATCACTTGCTTGGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: HGALQISREKQNSNFHTKRASSP*ITCLVL Trigger: TAAGACCAAGCAAGTGATCCAGGGGCTGGAAGCCCT...CTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | CGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCGGTTATTTAACTGTTTaGCAACATCAGGATGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RHRTKHMRSATKRPGRSSGYLTV*QHQDDP Trigger: AGGATCATCCTGATGTTGCCAAACAGTTAAATAACC...GCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACACCAAGACTTCCACAGCATTCAGGTaGTTGGACAGCGCCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: GALQISREKQNSNFHTKTSTAFR*LDSAII Trigger: GATGATGGCGCTGTCCAATCACCTGAATGCTGTGGA...AGTCTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | CTAAGGCCTGTCTTCAAGGTGAACAGCTACTCTCTCTTAACTGTTAAACTTGTTGAGATGATCTCATCCTaGGTGAGCTTCTCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRPVFKVNSYSLLTVKLVEMISS*VSFSSF Trigger: GAAGCTGGAGAAGCTCACGCAGGATGAGATCATCTC...AACAAGTTTAACAGTTAAGAGAGAGTAGCTGTTCACCTTGAAGACAGGCCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | GTATTGAAAATTAGAAGACAGTTCCCAGAGGCACTTAGAATCTATGCCCAAAGGGAGATGATCTCATCCTaGGTGAGCTTCTCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLKIRRQFPEALRIYAQREMISS*VSFSSF Trigger: GAAGCTGGAGAAGCTCACGCAGGATGAGATCATCTC...CCTTTGGGCATAGATTCTAAGTGCCTCTGGGAACTGTCTTCTAATTTTCAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | GTATTGAAAATTAGAAGACAGTTCCCAGAGGCACTTAGAATCTATGCCCAAAGGGTCTCCAGCAAACTCTaGAGGATGGAGTTGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLKIRRQFPEALRIYAQRVSSKL*RMELCS Trigger: TGAGCACAACTCCATCCTGCAGAGTTTGCTGGAGAC...CCTTTGGGCATAGATTCTAAGTGCCTCTGGGAACTGTCTTCTAATTTTCAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR GCA 90 bp | CACGGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACACCAAGGCATCTCCAGGGACTTaGGGATCATGCTGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HGALQISREKQNSNFHTKASPGT*GSCWIS Trigger: AGAAATCCAGCATGATCCGCAAGTCCCTGGAGATGC...CTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGTTTATTAGAAGTTAGAAAGACACATACACACATCACGGAGCACTTCAGAGACTGCTCGCTCTTCTaGAACTTCTGCTGCGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSLLEVRKTHTHITEHFRDCSLF*NFCCVL Trigger: CAACACGCAGCAGAAGTTGCAGAAGAGCGAGCAGTC...TCTGAAGTGCTCCGTGATGTGTGTATGTGTCTTTCTAACTTCTAATAAACTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | ACACATCACGGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACGACTGCTCGCTCTTCTaGAACTTCTGCTGCGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: THHGALQISREKQNSNFHDCSLF*NFCCVL Trigger: CAACACGCAGCAGAAGTTGCAGAAGAGCGAGCAGTC...GTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCCGTGATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | TTGAAAATTAGAAGACAGTTCCCAGAGGCACTTAGAATCTATGCCCAAAGGTTCACATTGTCAAGACCCTaGTTACGTGACCTCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LKIRRQFPEALRIYAQRFTLSRP*LRDLMA Trigger: CGCCATGAGGTCACGTAAGCAGGGTCTTGACAATGT...GAACCTTTGGGCATAGATTCTAAGTGCCTCTGGGAACTGTCTTCTAATTTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACACCAAGACTCTACTGTGCTGCTGCTaGATTCCTTGTCCTGGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GALQISREKQNSNFHTKTLLCCC*IPCPGS Trigger: CGAACCAGGACAAGGAATCCAGCAGCAGCACAGTAG...AGTCTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | AACACGGTTGATATCTCTAAGTACATATCTGGCAAAGCTACATGTATCCAGAAACAGCGTGCATCCAGATaGGCTTGTTCTCGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NTVDISKYISGKATCIQKQRASR*ACSRRP Trigger: TGGACGACGAGAACAAGCCCATCTGGATGCACGCTG...TTTCTGGATACATGTAGCTTTGCCAGATATGTACTTAGAGATATCAACCGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAGACACATACACACATCACGGAGCACTTCAGATTAGTAGAGAAAAGCAGAGCTTACGTGACCTCATaGCGGCTTCTTCCAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKTHTHITEHFRLVEKSRAYVTS*RLLPMS Trigger: AGACATTGGAAGAAGCCGCCATGAGGTCACGTAAGC...TCTGCTTTTCTCTACTAATCTGAAGTGCTCCGTGATGTGTGTATGTGTCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR TCA 90 bp | ACATACACACATCACGGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATCTCGTAACGCCCCTGTaGAGCATACTGGATCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: TYTHHGALQISREKQNSNLVTPL*SILDHQ Trigger: TTGGTGATCCAGTATGCTTCACAGGGGCGTTACGAG...ATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCCGTGATGTGTGTATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | GGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACACCAAGACTGAGATGATCTCATCCTaGGTGAGCTTCTCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GALQISREKQNSNFHTKTEMISS*VSFSSF Trigger: GAAGCTGGAGAAGCTCACGCAGGATGAGATCATCTC...AGTCTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | GAAGTTAGAAAGACACATACACACATCACGGAGCACTTCAGATTAGTAGAGAAAGCATCTCCAGGGACTTaGGGATCATGCTGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EVRKTHTHITEHFRLVEKASPGT*GSCWIS Trigger: AGAAATCCAGCATGATCCGCAAGTCCCTGGAGATGC...TTTCTCTACTAATCTGAAGTGCTCCGTGATGTGTGTATGTGTCTTTCTAACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | CACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACACCAAGACTACACGCACTACTGTGCTGCTaGTGGATTCCTTGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HFRLVEKSRIQISTPRLHALLCC*WIPCPG Trigger: ACCAGGACAAGGAATCCAGCAGCAGCACAGTAGTGC...GTGTAGTCTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | ACACATACACACATCACGGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAATCCTCCGCTTCTCCATaGTCTCAGGGTCATTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: THTHITEHFRLVEKSRIQSSASP*SQGHLA Trigger: TGCTAAATGACCCTGAGAGCATGGAGAAGCGGAGGA...TTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCCGTGATGTGTGTATGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | CGGTTGATATCTCTAAGTACATATCTGGCAAAGCTACATGTATCCAGAAATCAACTACTGTGCTGCTGCTaGATTCCTTGTCCTGGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLISLSTYLAKLHVSRNQLLCCC*IPCPGS Trigger: CGAACCAGGACAAGGAATCCAGCAGCAGCACAGTAG...TTGATTTCTGGATACATGTAGCTTTGCCAGATATGTACTTAGAGATATCAACCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | AGTTTATTAGAAGTTAGAAAGACACATACACACATCACGGAGCACTTCAGATTACAGCGTGCATCCAGATaGGCTTGTTCTCGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLEVRKTHTHITEHFRLQRASR*ACSRRP Trigger: TGGACGACGAGAACAAGCCCATCTGGATGCACGCTG...TAATCTGAAGTGCTCCGTGATGTGTGTATGTGTCTTTCTAACTTCTAATAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | TTAACACGGTTGATATCTCTAAGTACATATCTGGCAAAGCTACATGTATCCAGAGTCTCCAGCAAACTCTaGAGGATGGAGTTGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTRLISLSTYLAKLHVSRVSSKL*RMELCS Trigger: TGAGCACAACTCCATCCTGCAGAGTTTGCTGGAGAC...TCTGGATACATGTAGCTTTGCCAGATATGTACTTAGAGATATCAACCGTGTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | CACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACACCAAGACTACACGGGACTTGCGGATCATaGTGGATTTCTCTTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HFRLVEKSRIQISTPRLHGTCGS*WISLPP Trigger: TGGTGGAAGAGAAATCCAGCATGATCCGCAAGTCCC...GTGTAGTCTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | CATACACACATCACGGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTGGGACTTGCGGATCATaGTGGATTTCTCTTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HTHITEHFRLVEKSRIQIGTCGS*WISLPP Trigger: TGGTGGAAGAGAAATCCAGCATGATCCGCAAGTCCC...AATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCCGTGATGTGTGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | GGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACACCAAGACTCTTGTACAGCGTTTCTaGCTGCTTGAACTTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GALQISREKQNSNFHTKTLVQRF*LLELPL Trigger: CAAGGGAAGTTCAAGCAGGCAGAAACGCTGTACAAG...AGTCTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | TTATTAGAAGTTAGAAAGACACATACACACATCACGGAGCACTTCAGATTAGTATGCAGGATGGAGTTGTaGTCATTCTTCAGGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLEVRKTHTHITEHFRLVCRMEL*SFFRAS Trigger: GGAAGCCCTGAAGAATGAGCACAACTCCATCCTGCA...TACTAATCTGAAGTGCTCCGTGATGTGTGTATGTGTCTTTCTAACTTCTAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGTTTATTAGAAGTTAGAAAGACACATACACACATCACGGAGCACTTCAGATCGTACTTCTTCAGCTaGTTCATGAACTCCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSLLEVRKTHTHITEHFRSYFFS*FMNSRC Trigger: ACACCTGGAGTTCATGAACCAGCTGAAGAAGTACGA...TCTGAAGTGCTCCGTGATGTGTGTATGTGTCTTTCTAACTTCTAATAAACTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | ACACATACACACATCACGGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAATCGTACTTCTTCAGCTaGTTCATGAACTCCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: THTHITEHFRLVEKSRIQSYFFS*FMNSRC Trigger: ACACCTGGAGTTCATGAACCAGCTGAAGAAGTACGA...TTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCCGTGATGTGTGTATGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | GTATTGAAAATTAGAAGACAGTTCCCAGAGGCACTTAGAATCTATGCCCAAAGGCATCCAACGGCTCTTTaGAAGAATCAGAGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLKIRRQFPEALRIYAQRHPTAL*KNQSLC Trigger: ACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATG...CCTTTGGGCATAGATTCTAAGTGCCTCTGGGAACTGTCTTCTAATTTTCAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CCA 90 bp | CATACACACATCACGGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTTCGTCCTCGTCATTTaGGAAGAGATCATCCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHITEHFRLVEKSRIQIFVLVI*EEIIQR Trigger: CCGTTGGATGATCTCTTCCCAAATGACGAGGACGAA...AATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCCGTGATGTGTGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR GCA 90 bp | TTATTAGAAGTTAGAAAGACACATACACACATCACGGAGCACTTCAGATTAGTATACAGCGTTTCTGCCTaGTTGAACTTCCCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLEVRKTHTHITEHFRLVYSVSA*LNFPCF Trigger: GAAACAAGGGAAGTTCAAGCAGGCAGAAACGCTGTA...TACTAATCTGAAGTGCTCCGTGATGTGTGTATGTGTCTTTCTAACTTCTAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | GGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACACCAAGACTCCTTTATGTACACCATaGTGGACATGTTGTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: GALQISREKQNSNFHTKTPLCTP*WTCCHT Trigger: TGTATGACAACATGTCCACCATGGTGTACATAAAGG...AGTCTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CCA 90 bp | GTATTGAAAATTAGAAGACAGTTCCCAGAGGCACTTAGAATCTATGCCCAAAGGGGTTATTTAACTGTTTaGCAACATCAGGATGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLKIRRQFPEALRIYAQRGYLTV*QHQDDP Trigger: AGGATCATCCTGATGTTGCCAAACAGTTAAATAACC...CCTTTGGGCATAGATTCTAAGTGCCTCTGGGAACTGTCTTCTAATTTTCAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| 3UTR CAA 72 bp | ACTTGTTGTTACACATTAATGGGCTTATTAACACGGTaGATATCTCTAAGTACATATCTGGCAAAGCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: TCCYTLMGLLTR*ISLSTYLAKLH Trigger: ATGTAGCTTTGCCAGATATGTACTTAGAGATATCAACCGTGTTAATAAGCCCATTAATGTGTAACAACAAGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CAA 90 bp | AGGAGGCGCTGCCCGTCCCGCCATGCAGGAGCAGGGGGAGGCACCGGGCGGGCGTTGACCACGTCCATATaGAGACTCTCCCGGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RRRCPSRHAGAGGGTGRALTTSI*RLSRLL Trigger: GAGGAGCCGGGAGAGTCTCAATATGGACGTGGTCAA...CGCCCGCCCGGTGCCTCCCCCTGCTCCTGCATGGCGGGACGGGCAGCGCCTCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CAA 90 bp | GCGGAGGGACAGCACTGGAGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCATGCACTGCTGCTGGATTCCTaGTCCTGGTTCGTCCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: AEGQHWRGRRRRCPSRHALLLDS*SWFVLV Trigger: GACGAGGACGAACCAGGACAAGGAATCCAGCAGCAG...TGCATGGCGGGACGGGCAGCGCCTCCTGCGGCCCCTCCAGTGCTGTCCCTCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CAA 90 bp | CCGTCCCGCCATGCAGGAGCAGGGGGAGGCACCGGGCGGGCGGCTAGGCCATGGGAAGAATCAGAGTCTTaGTCCTCCGAGGGGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: PSRHAGAGGGTGRAARPWEESES*SSEGEM Trigger: CATCTCCCCCTCGGAGGACAAAGACTCTGATTCTTC...CCATGGCCTAGCCGCCCGCCCGGTGCCTCCCCCTGCTCCTGCATGGCGGGACGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120544.9 |
||
| CDS-3UTR CAA 90 bp | AGGAGGCGCTGCCCGTCCCGCCATGCAGGAGCAGGGGGAGGCACCGGGCGGGCGCTGCTTGAACTTCCCTaGTTTCAGATAACAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RRRCPSRHAGAGGGTGRALLELP*FQITGG Trigger: GCCTCCTGTTATCTGAAACAAGGGAAGTTCAAGCAG...CGCCCGCCCGGTGCCTCCCCCTGCTCCTGCATGGCGGGACGGGCAGCGCCTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CAA 90 bp | CAAATCTACGTCAGTGTGTCCTGGGGAGGCCCCGCGCAGGGCACCGGCCAGGTCCTGCTGCTGGATTCCTaGTCCTGGTTCGTCCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: QIYVSVSWGGPAQGTGQVLLLDS*SWFVLV Trigger: GACGAGGACGAACCAGGACAAGGAATCCAGCAGCAG...GACCTGGCCGGTGCCCTGCGCGGGGCCTCCCCAGGACACACTGACGTAGATTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CAA 90 bp | GACAGCGGAGGGACAGCACTGGAGGGGCCGCAGGAGGCGCTGCCCGTCCCGCCAAGCGTTTCTGCCTGCTaGAACTTCCCTTGTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: DSGGTALEGPQEALPVPPSVSAC*NFPCFR Trigger: TCTGAAACAAGGGAAGTTCAAGCAGGCAGAAACGCT...TGGCGGGACGGGCAGCGCCTCCTGCGGCCCCTCCAGTGCTGTCCCTCCGCTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGAGCAGGGGGAGGCACCGGGCGGGCGGCTAGGCCATGGGACGCTGAGCAATCCTTCTGCTTGCCTTaGCACTCCTCTCTCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGAGGGTGRAARPWDAEQSFCLP*HSSLSS Trigger: TGAAGAGAGAGAGGAGTGCAAAGGCAAGCAGAAGGA...TTGCTCAGCGTCCCATGGCCTAGCCGCCCGCCCGGTGCCTCCCCCTGCTCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120544.9 |
||
| CDS-3UTR CAA 90 bp | GCTGACACGCCCCTAGGGCTGCTAGACAGCGGAGGGACAGCACTGGAGGGGCCGGAAGAATCAGAGTCTTaGTCCTCCGAGGGGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: ADTPLGLLDSGGTALEGPEESES*SSEGEM Trigger: CATCTCCCCCTCGGAGGACAAAGACTCTGATTCTTC...CGGCCCCTCCAGTGCTGTCCCTCCGCTGTCTAGCAGCCCTAGGGGCGTGTCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CAA 90 bp | CCCCTAGGGCTGCTAGACAGCGGAGGGACAGCACTGGAGGGGCCGCAGGAGGCGTCCTTCTGCTTGCCTTaGCACTCCTCTCTCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLGLLDSGGTALEGPQEASFCLP*HSSLSS Trigger: TGAAGAGAGAGAGGAGTGCAAAGGCAAGCAGAAGGA...CGCCTCCTGCGGCCCCTCCAGTGCTGTCCCTCCGCTGTCTAGCAGCCCTAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CAA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCCTGCTGCTGGATTCCTaGTCCTGGTTCGTCCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: KRPGRSSKSQTCPARRPPLLLDS*SWFVLV Trigger: GACGAGGACGAACCAGGACAAGGAATCCAGCAGCAG...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGATGGAAGCCCGGAGTTaGCTAAAGGAGCCACTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QAEAARARRVLLVGLPGRMEARS*LKEPLR Trigger: GCGCAGTGGCTCCTTTAGCAAACTCCGGGCTTCCAT...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS CCA 90 bp | GAGCGCGGAGCTTTTGCTTCTCGGACTCCACAGCATTCAGGTGATTaGACAGCGCCATCATCACCTGCGCCTCGCTCAGGCCAAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ERGAFASRTPQHSGD*TAPSSPAPRSGQAP Trigger: TGGAGCTTGGCCTGAGCGAGGCGCAGGTGATGATGGCGCTGTCCAATCACCTGAATGCTGTGGAGTCCGAGAAGCAAAAGCTCCGCGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGACCAGGGCCAAGATGTaGAGCATGGTAGCCACATCG | + |
|
Preference number: 5 (lower is better) Translates to: QAEAARARRVLLVGLPGRTRAKM*SMVATS Trigger: CGATGTGGCTACCATGCTCAACATCTTGGCCCTGGT...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGTTGACCACGTCCATATaGAGACTCTCCCGGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QAEAARARRVLLVGLPGRLTTSI*RLSRLL Trigger: GAGGAGCCGGGAGAGTCTCAATATGGACGTGGTCAA...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR CAA 90 bp | GACGTGGTGAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGGGTCTTGACCACGTCCATATaGAGACTCTCCCGGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: DVVSAACAHRWPSDSARVLTTSI*RLSRLL Trigger: GAGGAGCCGGGAGAGTCTCAATATGGACGTGGTCAA...GACCCTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTCACCACGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCGAAGAATCAGAGTCTTaGTCCTCCGAGGGGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KRPGRSSKSQTCPARRPPEESES*SSEGEM Trigger: CATCTCCCCCTCGGAGGACAAAGACTCTGATTCTTC...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR CAA 90 bp | GGTGAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGGGTCACGTTCGGGTGAGAATCTCCTaGTACAGCGTTTCTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GECCLCSQMAQRLSQGHVRVRIS*YSVSAC Trigger: GCAGGCAGAAACGCTGTACAAGGAGATTCTCACCCG...AACGTGACCCTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGGGGCCACTCTCGTACTaGACCACGTCCATATTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QAEAARARRVLLVGLPGRGPLSY*TTSILR Trigger: TCTCAATATGGACGTGGTCAAGTACGAGAGTGGCCC...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS CCA 90 bp | GGCGGCGGCCGCAGCACTACTGTGCTGCTGCTGGATTCCTTGTCCTaGTTCGTCCTCGTCATTTGGGAAGAGATCATCCAACGGCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GGGRSTTVLLLDSLS*FVLVIWEEIIQRLF Trigger: AAAGAGCCGTTGGATGATCTCTTCCCAAATGACGAGGACGAACCAGGACAAGGAATCCAGCAGCAGCACAGTAGTGCTGCGGCCGCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCAGGAAGGTTCTCTTCCACCAGGTaGCTCTCGTCATCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QAEAARARRVLLVGLPGRFSSTR*LSSSFF Trigger: GAAGAAGGATGACGAGAGCAACCTGGTGGAAGAGAA...CCTTCCTGGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCATGGCTTCTGAGGCACTCGCACTGGTATGGCCTGCTGAACCATCTCTCCCTGAGCGCGGAGCTTTaGCTTCTCGGACTCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: FPWLLRHSHWYGLLNHLSLSAEL*LLGLHS Trigger: GCTGTGGAGTCCGAGAAGCAAAAGCTCCGCGCTCAG...GGAGAGATGGTTCAGCAGGCCATACCAGTGCGAGTGCCTCAGAAGCCATGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCTCCTTCTGCTTGCCTTaGCACTCCTCTCTCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KRPGRSSKSQTCPARRPPSFCLP*HSSLSS Trigger: TGAAGAGAGAGAGGAGTGCAAAGGCAAGCAGAAGGA...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCACACCAAGACTACACAGCAAATCTACGTCAGTGTGTCCTGGGGAGGCCCCTGAGCGCGGAGCTTTaGCTTCTCGGACTCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: FPHQDYTANLRQCVLGRPLSAEL*LLGLHS Trigger: GCTGTGGAGTCCGAGAAGCAAAAGCTCCGCGCTCAG...GGGCCTCCCCAGGACACACTGACGTAGATTTGCTGTGTAGTCTTGGTGTGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CAA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCCTGCTTGAACTTCCCTaGTTTCAGATAACAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KRPGRSSKSQTCPARRPPLLELP*FQITGG Trigger: GCCTCCTGTTATCTGAAACAAGGGAAGTTCAAGCAG...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CAA 90 bp | GGTGAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGGGTCACGTTTCCTTCTGCTTGCCTTaGCACTCCTCTCTCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GECCLCSQMAQRLSQGHVSFCLP*HSSLSS Trigger: TGAAGAGAGAGAGGAGTGCAAAGGCAAGCAGAAGGA...AACGTGACCCTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
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| CDS-3UTR CAA 90 bp | AAGCCCCCAGGCACAGATGCAGATCAAGCAACAGAATTCTGGGGTGAGGCTGCCTTGACCACGTCCATATaGAGACTCTCCCGGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KPPGTDADQATEFWGEAALTTSI*RLSRLL Trigger: GAGGAGCCGGGAGAGTCTCAATATGGACGTGGTCAA...GGCAGCCTCACCCCAGAATTCTGTTGCTTGATCTGCATCTGTGCCTGGGGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CAA 90 bp | AGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGGGTCACGTTAGTGGGGCCACTCTCGTACTaGACCACGTCCATATTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SAACAHRWPSDSARVTLVGPLSY*TTSILR Trigger: TCTCAATATGGACGTGGTCAAGTACGAGAGTGGCCC...CACTAACGTGACCCTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
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| CDS GCA 90 bp | CCTCGCTCAGGCCAAGCTCCAGCATCTCCAGGGACTTGCGGATCATaGTGGATTTCTCTTCCACCAGGTTGCTCTCGTCATCCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRSGQAPASPGTCGS*WISLPPGCSRHPSS Trigger: TGAAGAAGGATGACGAGAGCAACCTGGTGGAAGAGAAATCCAGCATGATCCGCAAGTCCCTGGAGATGCTGGAGCTTGGCCTGAGCGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CCA 90 bp | CGCTCAGGCCAAGCTCCAGCATCTCCAGGGACTTGCGGATCATGCTaGATTTCTCTTCCACCAGGTTGCTCTCGTCATCCTTCTTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSGQAPASPGTCGSC*ISLPPGCSRHPSSS Trigger: GCTTGAAGAAGGATGACGAGAGCAACCTGGTGGAAGAGAAATCCAGCATGATCCGCAAGTCCCTGGAGATGCTGGAGCTTGGCCTGAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS-3UTR CAA 90 bp | CGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCCTGAGCGCGGAGCTTTaGCTTCTCGGACTCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RHRTKHMRSATKRPGRSSLSAEL*LLGLHS Trigger: GCTGTGGAGTCCGAGAAGCAAAAGCTCCGCGCTCAG...GCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR CAA 90 bp | AAGCCCCCAGGCACAGATGCAGATCAAGCAACAGAATTCTGGGGTGAGGCTGCCGAAGAATCAGAGTCTTaGTCCTCCGAGGGGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KPPGTDADQATEFWGEAAEESES*SSEGEM Trigger: CATCTCCCCCTCGGAGGACAAAGACTCTGATTCTTC...GGCAGCCTCACCCCAGAATTCTGTTGCTTGATCTGCATCTGTGCCTGGGGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| CDS-3UTR CAA 90 bp | AAGAGGCCAGGCAGAAGCAGCAAGAGCCAGACGTGTCCTGCTCGTAGGCCTCCCTCATCCAACGGCTCTTaGGAAGAATCAGAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KRPGRSSKSQTCPARRPPSSNGS*EESESL Trigger: CAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGA...GGGAGGCCTACGAGCAGGACACGTCTGGCTCTTGCTGCTTCTGCCTGGCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR CAA 90 bp | CACCATGAGGAACTGAGGAACATGGTGAAAGGGACAGCCGAGCCCTGCTTTTCTCTGCTGCTGGATTCCTaGTCCTGGTTCGTCCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: HHEELRNMVKGTAEPCFSLLLDS*SWFVLV Trigger: GACGAGGACGAACCAGGACAAGGAATCCAGCAGCAG...AGAAAAGCAGGGCTCGGCTGTCCCTTTCACCATGTTCCTCAGTTCCTCATGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| CDS GCA 90 bp | CTCTCGTCATCCTTCTTCAAGCACTTCAGCGTCTCCAGCAAACTCTaGAGGATGGAGTTGTGCTCATTCTTCAGGGCTTCCAGCCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSSSFFKHFSVSSKL*RMELCSFFRASSPW Trigger: CCAGGGGCTGGAAGCCCTGAAGAATGAGCACAACTCCATCCTGCAGAGTTTGCTGGAGACGCTGAAGTGCTTGAAGAAGGATGACGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS-3UTR CAA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCCTGAGCGCGGAGCTTTaGCTTCTCGGACTCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: TRHRTKHMRSATKRPGRSLSAEL*LLGLHS Trigger: GCTGTGGAGTCCGAGAAGCAAAAGCTCCGCGCTCAG...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR CAA 90 bp | GAGTGCTGCTTGTGCTCACAGATGGCCCAGCGACTCAGCCAGGGTCACGTTAGTAGCGTTTCTGCCTGCTaGAACTTCCCTTGTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ECCLCSQMAQRLSQGHVSSVSAC*NFPCFR Trigger: TCTGAAACAAGGGAAGTTCAAGCAGGCAGAAACGCT...ACTAACGTGACCCTGGCTGAGTCGCTGGGCCATCTGTGAGCACAAGCAGCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
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| CDS-3UTR CAA 90 bp | GGACAGCCGAGCCCTGCTTTTCTCCTAAGGACATTAAGTGCAACAGAACCTTGCATGGAAGCCCGGAGTTaGCTAAAGGAGCCACTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GQPSPAFLLRTLSATEPCMEARS*LKEPLR Trigger: GCGCAGTGGCTCCTTTAGCAAACTCCGGGCTTCCAT...GCAAGGTTCTGTTGCACTTAATGTCCTTAGGAGAAAAGCAGGGCTCGGCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| CDS GCA 90 bp | TTCAAGCACTTCAGCGTCTCCAGCAAACTCTGCAGGATGGAGTTGTaGTCATTCTTCAGGGCTTCCAGCCCCTGGATCACTTGCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FKHFSVSSKLCRMEL*SFFRASSPWITCLV Trigger: GACCAAGCAAGTGATCCAGGGGCTGGAAGCCCTGAAGAATGAGCACAACTCCATCCTGCAGAGTTTGCTGGAGACGCTGAAGTGCTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS GCA 90 bp | CGCTTCTCCATGCTCTCAGGGTCATTTAGCACTTCAGCCACTCTCTaGTTACGTGACCTCATGGCGGCTTCTTCCAATGTCTCTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RFSMLSGSFSTSATL*LRDLMAASSNVSAA Trigger: AGCTGCAGAGACATTGGAAGAAGCCGCCATGAGGTCACGTAAGCAGAGAGTGGCTGAAGTGCTAAATGACCCTGAGAGCATGGAGAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122300.8 |
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| CDS CCA 90 bp | CTCTGCAGGATGGAGTTGTGCTCATTCTTCAGGGCTTCCAGCCCCTaGATCACTTGCTTGGTCTTAGAGATGATCTCATCCTGCGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCRMELCSFFRASSP*ITCLVLEMISSCVS Trigger: GCTCACGCAGGATGAGATCATCTCTAAGACCAAGCAAGTGATCCAGGGGCTGGAAGCCCTGAAGAATGAGCACAACTCCATCCTGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CCA 90 bp | CAGGGTCATTTAGCACTTCAGCCACTCTCTGCTTACGTGACCTCATaGCGGCTTCTTCCAATGTCTCTGCAGCTTCAAACTTCCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGHLALQPLSAYVTS*RLLPMSLQLQTSPA Trigger: GGCAGGGGAAGTTTGAAGCTGCAGAGACATTGGAAGAAGCCGCCATGAGGTCACGTAAGCAGAGAGTGGCTGAAGTGCTAAATGACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122300.8 |
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| CDS-3UTR CAA 90 bp | TGCACAGTGCTGACTGCATACAAGTTCCCAGAGTGCTCTGAAGCAGTGTCAGCTACCAGGGCCAAGATGTaGAGCATGGTAGCCACATCG | + |
|
Preference number: 5 (lower is better) Translates to: CTVLTAYKFPECSEAVSATRAKM*SMVATS Trigger: CGATGTGGCTACCATGCTCAACATCTTGGCCCTGGT...AGCTGACACTGCTTCAGAGCACTCTGGGAACTTGTATGCAGTCAGCACTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| CDS GCA 90 bp | TTCCAATGTCTCTGCAGCTTCAAACTTCCCCTGCCGTCGGTAAAGTaGTCCAAGGTTTTTCAAGGTGGTTGTGACGGTGGGACTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FQCLCSFKLPLPSVK*SKVFQGGCDGGTVH Trigger: GTGGACAGTCCCACCGTCACAACCACCTTGAAAAACCTTGGAGCACTTTACCGACGGCAGGGGAAGTTTGAAGCTGCAGAGACATTGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000134578.2 ENSMUST00000239017.2 |
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| CDS CCA 90 bp | CTGGTTCGTCCTCGTCATTTGGGAAGAGATCATCCAACGGCTCTTTaGAAGAATCAGAGTCTTTGTCCTCCGAGGGGGAGATGTCGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LVRPRHLGRDHPTAL*KNQSLCPPRGRCRR Trigger: ACGACGACATCTCCCCCTCGGAGGACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGATCTCTTCCCAAATGACGAGGACGAACCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS-3UTR CAA 90 bp | CACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCAAGACCAGGGCCAAGATGTaGAGCATGGTAGCCACATCG | + |
|
Preference number: 5 (lower is better) Translates to: HRTKHMRSATKRPGRSSKTRAKM*SMVATS Trigger: CGATGTGGCTACCATGCTCAACATCTTGGCCCTGGT...CTTGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCATGGCTTCTGAGGCACTCGCACTGGTATGGCCTGCTGAACCATCTCTCCCTGCTTGAACTTCCCTaGTTTCAGATAACAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPWLLRHSHWYGLLNHLSLLELP*FQITGG Trigger: GCCTCCTGTTATCTGAAACAAGGGAAGTTCAAGCAG...GGAGAGATGGTTCAGCAGGCCATACCAGTGCGAGTGCCTCAGAAGCCATGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGCCAGGCACCTTTTAAGCAAAGCCTACAGGCTGTGGACATCCCCATCTAGCGTTTCTGCCTGCTaGAACTTCCCTTGTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EAARHLLSKAYRLWTSPSSVSAC*NFPCFR Trigger: TCTGAAACAAGGGAAGTTCAAGCAGGCAGAAACGCT...AGATGGGGATGTCCACAGCCTGTAGGCTTTGCTTAAAAGGTGCCTGGCAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CAA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCCGGGTGAGAATCTCCTaGTACAGCGTTTCTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TRHRTKHMRSATKRPGRSRVRIS*YSVSAC Trigger: GCAGGCAGAAACGCTGTACAAGGAGATTCTCACCCG...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCAAAGCTACATGTATCCAGAAATCAAGAACCCAAAAGGACGGCAGCACCGCGGGTGAGAATCTCCTaGTACAGCGTTTCTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAKLHVSRNQEPKRTAAPRVRIS*YSVSAC Trigger: GCAGGCAGAAACGCTGTACAAGGAGATTCTCACCCG...CGGTGCTGCCGTCCTTTTGGGTTCTTGATTTCTGGATACATGTAGCTTTGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CAA 90 bp | CACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCAAGCGGGTGAGAATCTCCTaGTACAGCGTTTCTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HRTKHMRSATKRPGRSSKRVRIS*YSVSAC Trigger: GCAGGCAGAAACGCTGTACAAGGAGATTCTCACCCG...CTTGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CAA 90 bp | TGGCAAAGCTACATGTATCCAGAAATCAAGAACCCAAAAGGACGGCAGCACCGCTTGACCACGTCCATATaGAGACTCTCCCGGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WQSYMYPEIKNPKGRQHRLTTSI*RLSRLL Trigger: GAGGAGCCGGGAGAGTCTCAATATGGACGTGGTCAA...GCGGTGCTGCCGTCCTTTTGGGTTCTTGATTTCTGGATACATGTAGCTTTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CAA 90 bp | CACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCAAGTTGACCACGTCCATATaGAGACTCTCCCGGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HRTKHMRSATKRPGRSSKLTTSI*RLSRLL Trigger: GAGGAGCCGGGAGAGTCTCAATATGGACGTGGTCAA...CTTGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS CCA 90 bp | CTGGCGCTCAGTGTTCTCGAGTCTGCCAGACCATTATTTCGTTCTTaGAAGCAATCTTCTGTGGCTTTGCCACCCGCATTAAGAACACCC | + |
|
Preference number: 5 (lower is better) Translates to: LALSVLESARPLFRS*KQSSVALPPALRTP Trigger: GGGTGTTCTTAATGCGGGTGGCAAAGCCACAGAAGATTGCTTCCAAGAACGAAATAATGGTCTGGCAGACTCGAGAACACTGAGCGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CAA 90 bp | ACACGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCGAAGAATCAGAGTCTTaGTCCTCCGAGGGGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: TRHRTKHMRSATKRPGRSEESES*SSEGEM Trigger: CATCTCCCCCTCGGAGGACAAAGACTCTGATTCTTC...GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR CAA 90 bp | TTCTGGGGTGAGGCTGCCAGGCACCTTTTAAGCAAAGCCTACAGGCTGTGGACATCATCCAACGGCTCTTaGGAAGAATCAGAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FWGEAARHLLSKAYRLWTSSNGS*EESESL Trigger: CAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGA...TGTCCACAGCCTGTAGGCTTTGCTTAAAAGGTGCCTGGCAGCCTCACCCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CAA 90 bp | TACAGGCTGTGGACATCCCCATCTACAGAAAGTCCACTACAACCAAGAGGACAACGGGTGAGAATCTCCTaGTACAGCGTTTCTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YRLWTSPSTESPLQPRGQRVRIS*YSVSAC Trigger: GCAGGCAGAAACGCTGTACAAGGAGATTCTCACCCG...TTGTCCTCTTGGTTGTAGTGGACTTTCTGTAGATGGGGATGTCCACAGCCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CAA 90 bp | CACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCAAGGGGCCACTCTCGTACTaGACCACGTCCATATTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HRTKHMRSATKRPGRSSKGPLSY*TTSILR Trigger: TCTCAATATGGACGTGGTCAAGTACGAGAGTGGCCC...CTTGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS-3UTR CAA 90 bp | CACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCAAGTTCTCTTCCACCAGGTaGCTCTCGTCATCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HRTKHMRSATKRPGRSSKFSSTR*LSSSFF Trigger: GAAGAAGGATGACGAGAGCAACCTGGTGGAAGAGAA...CTTGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CAA 90 bp | CGTAACATCTCTAGCAGCATCCCAGGAGACTTCTATCTGAGCATCTGCGCTCTTTTCTCTTCCACCAGGTaGCTCTCGTCATCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RNISSSIPGDFYLSICALFSSTR*LSSSFF Trigger: GAAGAAGGATGACGAGAGCAACCTGGTGGAAGAGAA...AAGAGCGCAGATGCTCAGATAGAAGTCTCCTGGGATGCTGCTAGAGATGTTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CAA 90 bp | CGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCCTGCTTGAACTTCCCTaGTTTCAGATAACAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RHRTKHMRSATKRPGRSSLLELP*FQITGG Trigger: GCCTCCTGTTATCTGAAACAAGGGAAGTTCAAGCAG...GCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CAA 90 bp | CGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCAGCGTTTCTGCCTGCTaGAACTTCCCTTGTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RHRTKHMRSATKRPGRSSSVSAC*NFPCFR Trigger: TCTGAAACAAGGGAAGTTCAAGCAGGCAGAAACGCT...GCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS CCA 90 bp | ACTGTGCTGCTGCTGGATTCCTTGTCCTGGTTCGTCCTCGTCATTTaGGAAGAGATCATCCAACGGCTCTTTGGAAGAATCAGAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TVLLLDSLSWFVLVI*EEIIQRLFGRIRVF Trigger: AAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGATCTCTTCCCAAATGACGAGGACGAACCAGGACAAGGAATCCAGCAGCAGCACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
||
| CDS-3UTR CAA 90 bp | GTTGGAGTGAGTTTATTAGAAGTTAGAAAGACACATACACACATCACGGAGCACCTGAGCGCGGAGCTTTaGCTTCTCGGACTCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGVSLLEVRKTHTHITEHLSAEL*LLGLHS Trigger: GCTGTGGAGTCCGAGAAGCAAAAGCTCCGCGCTCAG...GTGCTCCGTGATGTGTGTATGTGTCTTTCTAACTTCTAATAAACTCACTCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
||
| CDS-3UTR CAA 90 bp | CGACACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCTCATCCAACGGCTCTTaGGAAGAATCAGAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RHRTKHMRSATKRPGRSSSSNGS*EESESL Trigger: CAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGA...GCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CAA 90 bp | CACAGAACTAAACACATGAGAAGTGCCACAAAGAGGCCAGGCAGAAGCAGCAAGAGCGTTTCTGCCTGCTaGAACTTCCCTTGTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HRTKHMRSATKRPGRSSKSVSAC*NFPCFR Trigger: TCTGAAACAAGGGAAGTTCAAGCAGGCAGAAACGCT...CTTGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCAAAGCTACATGTATCCAGAAATCAAGAACCCAAAAGGACGGCAGCACCGTCATCCAACGGCTCTTaGGAAGAATCAGAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LAKLHVSRNQEPKRTAAPSSNGS*EESESL Trigger: CAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGA...CGGTGCTGCCGTCCTTTTGGGTTCTTGATTTCTGGATACATGTAGCTTTGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR CAA 90 bp | CTAAGGCCTGTCTTCAAGGTGAACAGCTACTCTCTCTTAACTGTTAAACTTGTTACCAGGGCCAAGATGTaGAGCATGGTAGCCACATCG | + |
|
Preference number: 5 (lower is better) Translates to: LRPVFKVNSYSLLTVKLVTRAKM*SMVATS Trigger: CGATGTGGCTACCATGCTCAACATCTTGGCCCTGGT...AACAAGTTTAACAGTTAAGAGAGAGTAGCTGTTCACCTTGAAGACAGGCCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR CAA 90 bp | AGAAAGACACATACACACATCACGGAGCACTTCAGATTAGTAGAGAAAAGCAGACGGGTGAGAATCTCCTaGTACAGCGTTTCTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RKTHTHITEHFRLVEKSRRVRIS*YSVSAC Trigger: GCAGGCAGAAACGCTGTACAAGGAGATTCTCACCCG...TCTGCTTTTCTCTACTAATCTGAAGTGCTCCGTGATGTGTGTATGTGTCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR CAA 90 bp | TTGAAAATTAGAAGACAGTTCCCAGAGGCACTTAGAATCTATGCCCAAAGGTTCGGGCCACTCTCGTACTaGACCACGTCCATATTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LKIRRQFPEALRIYAQRFGPLSY*TTSILR Trigger: TCTCAATATGGACGTGGTCAAGTACGAGAGTGGCCC...GAACCTTTGGGCATAGATTCTAAGTGCCTCTGGGAACTGTCTTCTAATTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS-3UTR CAA 90 bp | GAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACACCAAGACTAACCAGGGCCAAGATGTaGAGCATGGTAGCCACATCG | + |
|
Preference number: 5 (lower is better) Translates to: EHFRLVEKSRIQISTPRLTRAKM*SMVATS Trigger: CGATGTGGCTACCATGCTCAACATCTTGGCCCTGGT...TAGTCTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR CAA 90 bp | GTATTGAAAATTAGAAGACAGTTCCCAGAGGCACTTAGAATCTATGCCCAAAGGTCCTTCTGCTTGCCTTaGCACTCCTCTCTCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VLKIRRQFPEALRIYAQRSFCLP*HSSLSS Trigger: TGAAGAGAGAGAGGAGTGCAAAGGCAAGCAGAAGGA...CCTTTGGGCATAGATTCTAAGTGCCTCTGGGAACTGTCTTCTAATTTTCAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| CDS-3UTR CAA 90 bp | GAAGTTAGAAAGACACATACACACATCACGGAGCACTTCAGATTAGTAGAGAAATTCTCTTCCACCAGGTaGCTCTCGTCATCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EVRKTHTHITEHFRLVEKFSSTR*LSSSFF Trigger: GAAGAAGGATGACGAGAGCAACCTGGTGGAAGAGAA...TTTCTCTACTAATCTGAAGTGCTCCGTGATGTGTGTATGTGTCTTTCTAACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR CAA 90 bp | CAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACACCAAGACTACACAGCAAGGGCCACTCTCGTACTaGACCACGTCCATATTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QISREKQNSNFHTKTTQQGPLSY*TTSILR Trigger: TCTCAATATGGACGTGGTCAAGTACGAGAGTGGCCC...TTGCTGTGTAGTCTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR CAA 90 bp | AACACGGTTGATATCTCTAAGTACATATCTGGCAAAGCTACATGTATCCAGAAAGGGCCACTCTCGTACTaGACCACGTCCATATTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NTVDISKYISGKATCIQKGPLSY*TTSILR Trigger: TCTCAATATGGACGTGGTCAAGTACGAGAGTGGCCC...TTTCTGGATACATGTAGCTTTGCCAGATATGTACTTAGAGATATCAACCGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR CAA 90 bp | GAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACACCAAGACTATTCTCTTCCACCAGGTaGCTCTCGTCATCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EHFRLVEKSRIQISTPRLFSSTR*LSSSFF Trigger: GAAGAAGGATGACGAGAGCAACCTGGTGGAAGAGAA...TAGTCTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR CAA 90 bp | CACATCACGGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACACTGCTTGAACTTCCCTaGTTTCAGATAACAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HITEHFRLVEKSRIQISTLLELP*FQITGG Trigger: GCCTCCTGTTATCTGAAACAAGGGAAGTTCAAGCAG...TGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCCGTGATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR CAA 90 bp | GGAGCACTTCAGATTAGTAGAGAAAAGCAGAATTCAAATTTCCACACCAAGACTAGCGTTTCTGCCTGCTaGAACTTCCCTTGTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GALQISREKQNSNFHTKTSVSAC*NFPCFR Trigger: TCTGAAACAAGGGAAGTTCAAGCAGGCAGAAACGCT...AGTCTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS-3UTR CAA 90 bp | AACACGGTTGATATCTCTAAGTACATATCTGGCAAAGCTACATGTATCCAGAAATCATCCAACGGCTCTTaGGAAGAATCAGAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NTVDISKYISGKATCIQKSSNGS*EESESL Trigger: CAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGA...TTTCTGGATACATGTAGCTTTGCCAGATATGTACTTAGAGATATCAACCGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118471.8 ENSMUST00000120544.9 |
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| CDS GCA 72 bp | CCGCCCTGCTGGGCGGCGGCCGCAGCACTACTGTGCTaGTGCTGGATTCCTTGTCCTGGTTCGTCCTCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PPCWAAAAALLC*CWIPCPGSSSS Trigger: TGACGAGGACGAACCAGGACAAGGAATCCAGCAGCAGCACAGTAGTGCTGCGGCCGCCGCCCAGCAGGGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 90 bp | CTGCGGGGGATGCCTTCCTCCCCTCCGTCAGGGCCACTCTCGTACTaGACCACGTCCATATTGAGACTCTCCCGGCTCCTCCGCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRGMPSSPPSGPLSY*TTSILRLSRLLRFS Trigger: GGAGAAGCGGAGGAGCCGGGAGAGTCTCAATATGGACGTGGTCAAGTACGAGAGTGGCCCTGACGGAGGGGAGGAAGGCATCCCCCGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
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| CDS TCA 72 bp | GGGGGATGCCCCAGGGTTCCTCGGCTCACTGTCCCGTaGGCTTCCTCCCTTCAGCTTCCTAACCAGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GGCPRVPRLTVP*ASSLQLPNQLL Trigger: GAGAAGCTGGTTAGGAAGCTGAAGGGAGGAAGCTCACGGGACAGTGAGCCGAGGAACCCTGGGGCATCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084941.12 ENSMUST00000122300.8 |
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| CDS GCA 72 bp | CCCTGCTGGGCGGCGGCCGCAGCACTACTGTGCTGCTaGTGGATTCCTTGTCCTGGTTCGTCCTCGTCATTT | + |
|
Preference number: 6 (lower is better) Translates to: PCWAAAAALLCC*WIPCPGSSSSF Trigger: AAATGACGAGGACGAACCAGGACAAGGAATCCAGCAGCAGCACAGTAGTGCTGCGGCCGCCGCCCAGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 90 bp | CTGCTGGGCGGCGGCCGCAGCACTACTGTGCTGCTGCTGGATTCCTaGTCCTGGTTCGTCCTCGTCATTTGGGAAGAGATCATCCAACGG | + |
|
Preference number: 6 (lower is better) Translates to: LLGGGRSTTVLLLDS*SWFVLVIWEEIIQR Trigger: CCGTTGGATGATCTCTTCCCAAATGACGAGGACGAACCAGGACAAGGAATCCAGCAGCAGCACAGTAGTGCTGCGGCCGCCGCCCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 90 bp | TCCTCCCCTCCGTCAGGGCCACTCTCGTACTTGACCACGTCCATATaGAGACTCTCCCGGCTCCTCCGCTTCTCCATGCTCTCAGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSPPSGPLSYLTTSI*RLSRLLRFSMLSGS Trigger: TGACCCTGAGAGCATGGAGAAGCGGAGGAGCCGGGAGAGTCTCAATATGGACGTGGTCAAGTACGAGAGTGGCCCTGACGGAGGGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000134578.2 ENSMUST00000239017.2 |
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| CDS TCA 72 bp | GCGCTTCAGACCAGGGTTCCTCGGCTCACTGTCCCGTaGGCTTCCTCCCTTCAGCTTCCTAACCAGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALQTRVPRLTVP*ASSLQLPNQLL Trigger: GAGAAGCTGGTTAGGAAGCTGAAGGGAGGAAGCTCACGGGACAGTGAGCCGAGGAACCCTGGTCTGAAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| CDS GCA 72 bp | CGTTGGGATCGTCGGGCCCCAGCTTCGTCTGGTAGATaGCCAGGGCCCTCTGGTAATAATACTCCACCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RWDRRAPASSGR*PGPSGNNTPPP Trigger: AGGAGGTGGAGTATTATTACCAGAGGGCCCTGGGCATCTACCAGACGAAGCTGGGGCCCGACGATCCCAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 72 bp | CCGTCAGGGCCACTCTCGTACTTGACCACGTCCATATaGAGACTCTCCCGGCTCCTCCGCTTCTCCATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PSGPLSYLTTSI*RLSRLLRFSML Trigger: GAGCATGGAGAAGCGGAGGAGCCGGGAGAGTCTCAATATGGACGTGGTCAAGTACGAGAGTGGCCCTGACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000134578.2 ENSMUST00000239017.2 |
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| CDS CAA 72 bp | CTCACTTCCTCCCCTCCGTCAGGGCCACTCTCGTACTaGACCACGTCCATATTGAGACTCTCCCGGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LTSSPPSGPLSY*TTSILRLSRLL Trigger: GAGGAGCCGGGAGAGTCTCAATATGGACGTGGTCAAGTACGAGAGTGGCCCTGACGGAGGGGAGGAAGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084941.12 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 72 bp | ATGCCTTCCTCCCCTCCGTCAGGGCCACTCTCGTACTaGACCACGTCCATATTGAGACTCTCCCGGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: MPSSPPSGPLSY*TTSILRLSRLL Trigger: GAGGAGCCGGGAGAGTCTCAATATGGACGTGGTCAAGTACGAGAGTGGCCCTGACGGAGGGGAGGAAGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134578.2 |
||
| CDS CAA 90 bp | ACGCTCATACTCACTTCCTCCCCTCCGTCAGGGCCACTCTCGTACTaGACCACGTCCATATTGAGACTCTCCCGGCTCCTCCGCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLILTSSPPSGPLSY*TTSILRLSRLLRFS Trigger: GGAGAAGCGGAGGAGCCGGGAGAGTCTCAATATGGACGTGGTCAAGTACGAGAGTGGCCCTGACGGAGGGGAGGAAGTGAGTATGAGCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084941.12 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS TCA 72 bp | CGGAGCTTTTGCTTCTCGGACTCCACAGCATTCAGGTaGTTGGACAGCGCCATCATCACCTGCGCCTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSFCFSDSTAFR*LDSAIITCASL Trigger: GAGCGAGGCGCAGGTGATGATGGCGCTGTCCAATCACCTGAATGCTGTGGAGTCCGAGAAGCAAAAGCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
||
| CDS CCA 72 bp | GCTTTTGCTTCTCGGACTCCACAGCATTCAGGTGATTaGACAGCGCCATCATCACCTGCGCCTCGCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AFASRTPQHSGD*TAPSSPAPRSG Trigger: GCCTGAGCGAGGCGCAGGTGATGATGGCGCTGTCCAATCACCTGAATGCTGTGGAGTCCGAGAAGCAAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
||
| CDS CAA 72 bp | CTCCTGGCACAGCCGTCGAACCTGAGCGCGGAGCTTTaGCTTCTCGGACTCCACAGCATTCAGGTGATTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLAQPSNLSAEL*LLGLHSIQVIG Trigger: TCCAATCACCTGAATGCTGTGGAGTCCGAGAAGCAAAAGCTCCGCGCTCAGGTTCGACGGCTGTGCCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 72 bp | GGCGGCCGCAGCACTACTGTGCTGCTGCTGGATTCCTaGTCCTGGTTCGTCCTCGTCATTTGGGAAGAGATC | + |
|
Preference number: 6 (lower is better) Translates to: GGRSTTVLLLDS*SWFVLVIWEEI Trigger: GATCTCTTCCCAAATGACGAGGACGAACCAGGACAAGGAATCCAGCAGCAGCACAGTAGTGCTGCGGCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
||
| CDS CAA 72 bp | GTGGCTTTGCCACCCGCATTAAGAACACCCAGAGAATaGGCGCGCTTCAGACCAGGGTTCCTCGGCTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: VALPPALRTPRE*ARFRPGFLGSL Trigger: CAGTGAGCCGAGGAACCCTGGTCTGAAGCGCGCCAATTCTCTGGGTGTTCTTAATGCGGGTGGCAAAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
||
| CDS CAA 72 bp | ATCTCCAGGGCTCGTTTACACAGCGGCTCCGCCTCCTaGTACTTCCCTCGCTTACCGTACAGTACTGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: ISRARLHSGSAS*YFPRLPYSTAR Trigger: CCTAGCAGTACTGTACGGTAAGCGAGGGAAGTACAAGGAGGCGGAGCCGCTGTGTAAACGAGCCCTGGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
||
| CDS TCA 72 bp | CAACATCAGGATGATCCTTTCCCAGAACCTTCTCCCTaGTCTCCAGGGCTCGTTTACACAGCGGCTCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: QHQDDPFPEPSP*SPGLVYTAAPP Trigger: AGGCGGAGCCGCTGTGTAAACGAGCCCTGGAGATCAGGGAGAAGGTTCTGGGAAAGGATCATCCTGATGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 72 bp | CACTTCAGCGTCTCCAGCAAACTCTGCAGGATGGAGTaGTGCTCATTCTTCAGGGCTTCCAGCCCCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: HFSVSSKLCRME*CSFFRASSPWI Trigger: GATCCAGGGGCTGGAAGCCCTGAAGAATGAGCACAACTCCATCCTGCAGAGTTTGCTGGAGACGCTGAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 90 bp | TTCTCCCTGATCTCCAGGGCTCGTTTACACAGCGGCTCCGCCTCCTaGTACTTCCCTCGCTTACCGTACAGTACTGCTAGGTTGTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: FSLISRARLHSGSAS*YFPRLPYSTARLFR Trigger: TCTGAACAACCTAGCAGTACTGTACGGTAAGCGAGGGAAGTACAAGGAGGCGGAGCCGCTGTGTAAACGAGCCCTGGAGATCAGGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS GCA 72 bp | CTCTGCAGCTTCAAACTTCCCCTGCCGTCGGTAAAGTaGTCCAAGGTTTTTCAAGGTGGTTGTGACGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: LCSFKLPLPSVK*SKVFQGGCDGG Trigger: CCCACCGTCACAACCACCTTGAAAAACCTTGGAGCACTTTACCGACGGCAGGGGAAGTTTGAAGCTGCAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000134578.2 ENSMUST00000239017.2 |
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| CDS CCA 72 bp | TCAAGCACTTCAGCGTCTCCAGCAAACTCTGCAGGATaGAGTTGTGCTCATTCTTCAGGGCTTCCAGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: SSTSASPANSAG*SCAHSSGLPAP Trigger: AGGGGCTGGAAGCCCTGAAGAATGAGCACAACTCCATCCTGCAGAGTTTGCTGGAGACGCTGAAGTGCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CCA 72 bp | CAAGCTCCAGCATCTCCAGGGACTTGCGGATCATGCTaGATTTCTCTTCCACCAGGTTGCTCTCGTCATCCT | + |
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Preference number: 6 (lower is better) Translates to: QAPASPGTCGSC*ISLPPGCSRHP Trigger: AGGATGACGAGAGCAACCTGGTGGAAGAGAAATCCAGCATGATCCGCAAGTCCCTGGAGATGCTGGAGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 90 bp | CCTGGTTCGTCCTCGTCATTTGGGAAGAGATCATCCAACGGCTCTTaGGAAGAATCAGAGTCTTTGTCCTCCGAGGGGGAGATGTCGTCG | + |
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Preference number: 6 (lower is better) Translates to: PGSSSSFGKRSSNGS*EESESLSSEGEMSS Trigger: CGACGACATCTCCCCCTCGGAGGACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGATCTCTTCCCAAATGACGAGGACGAACCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CCA 72 bp | CGCAGCACTACTGTGCTGCTGCTGGATTCCTTGTCCTaGTTCGTCCTCGTCATTTGGGAAGAGATCATCCAA | + |
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Preference number: 6 (lower is better) Translates to: RSTTVLLLDSLS*FVLVIWEEIIQ Trigger: TTGGATGATCTCTTCCCAAATGACGAGGACGAACCAGGACAAGGAATCCAGCAGCAGCACAGTAGTGCTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 90 bp | TTCTTCAAGCACTTCAGCGTCTCCAGCAAACTCTGCAGGATGGAGTaGTGCTCATTCTTCAGGGCTTCCAGCCCCTGGATCACTTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: FFKHFSVSSKLCRME*CSFFRASSPWITCL Trigger: CAAGCAAGTGATCCAGGGGCTGGAAGCCCTGAAGAATGAGCACAACTCCATCCTGCAGAGTTTGCTGGAGACGCTGAAGTGCTTGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 90 bp | ATCTCCAGGGACTTGCGGATCATGCTGGATTTCTCTTCCACCAGGTaGCTCTCGTCATCCTTCTTCAAGCACTTCAGCGTCTCCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: ISRDLRIMLDFSSTR*LSSSFFKHFSVSSK Trigger: TTTGCTGGAGACGCTGAAGTGCTTGAAGAAGGATGACGAGAGCAACCTGGTGGAAGAGAAATCCAGCATGATCCGCAAGTCCCTGGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 90 bp | TTTGGGAAGAGATCATCCAACGGCTCTTTGGAAGAATCAGAGTCTTaGTCCTCCGAGGGGGAGATGTCGTCGTCGTACTTCTTCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: FGKRSSNGSLEESES*SSEGEMSSSYFFSW Trigger: CCAGCTGAAGAAGTACGACGACGACATCTCCCCCTCGGAGGACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGATCTCTTCCCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 90 bp | GCTGGCGCTCAGTGTTCTCGAGTCTGCCAGACCATTATTTCGTTCTaGGAAGCAATCTTCTGTGGCTTTGCCACCCGCATTAAGAACACC | + |
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Preference number: 6 (lower is better) Translates to: AGAQCSRVCQTIISF*EAIFCGFATRIKNT Trigger: GGTGTTCTTAATGCGGGTGGCAAAGCCACAGAAGATTGCTTCCAAGAACGAAATAATGGTCTGGCAGACTCGAGAACACTGAGCGCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| CDS GCA 72 bp | ATGCTCTCAGGGTCATTTAGCACTTCAGCCACTCTCTaGTTACGTGACCTCATGGCGGCTTCTTCCAATGTC | + |
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Preference number: 6 (lower is better) Translates to: MLSGSFSTSATL*LRDLMAASSNV Trigger: GACATTGGAAGAAGCCGCCATGAGGTCACGTAAGCAGAGAGTGGCTGAAGTGCTAAATGACCCTGAGAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122300.8 |
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| CDS CCA 72 bp | CCTCGTCATTTGGGAAGAGATCATCCAACGGCTCTTTaGAAGAATCAGAGTCTTTGTCCTCCGAGGGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: PRHLGRDHPTAL*KNQSLCPPRGR Trigger: TCTCCCCCTCGGAGGACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGATCTCTTCCCAAATGACGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 72 bp | GACTTGCGGATCATGCTGGATTTCTCTTCCACCAGGTaGCTCTCGTCATCCTTCTTCAAGCACTTCAGCGTC | + |
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Preference number: 6 (lower is better) Translates to: DLRIMLDFSSTR*LSSSFFKHFSV Trigger: GACGCTGAAGTGCTTGAAGAAGGATGACGAGAGCAACCTGGTGGAAGAGAAATCCAGCATGATCCGCAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 72 bp | AGATCATCCAACGGCTCTTTGGAAGAATCAGAGTCTTaGTCCTCCGAGGGGGAGATGTCGTCGTCGTACTTC | + |
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Preference number: 6 (lower is better) Translates to: RSSNGSLEESES*SSEGEMSSSYF Trigger: GAAGTACGACGACGACATCTCCCCCTCGGAGGACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 72 bp | TCCTCGTCATTTGGGAAGAGATCATCCAACGGCTCTTaGGAAGAATCAGAGTCTTTGTCCTCCGAGGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SSSFGKRSSNGS*EESESLSSEGE Trigger: CTCCCCCTCGGAGGACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGATCTCTTCCCAAATGACGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS TCA 72 bp | GTCGGTAAAGTGCTCCAAGGTTTTTCAAGGTGGTTGTaGCGGTGGGACTGTCCACTTTGCAGGCTTTATACC | + |
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Preference number: 6 (lower is better) Translates to: VGKVLQGFSRWL*RWDCPLCRLYT Trigger: GGTATAAAGCCTGCAAAGTGGACAGTCCCACCGTCACAACCACCTTGAAAAACCTTGGAGCACTTTACCGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000134578.2 ENSMUST00000239017.2 |
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| CDS TCA 72 bp | TCTCTGTTTGTGAACATTGTCAAGACCCTGCTTACGTaGCCTCATGGCGGCTTCTTCCAATGTCTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SLFVNIVKTLLT*PHGGFFQCLCS Trigger: GCTGCAGAGACATTGGAAGAAGCCGCCATGAGGTCACGTAAGCAGGGTCTTGACAATGTTCACAAACAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000134578.2 ENSMUST00000239017.2 |
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| CDS GCA 72 bp | ACTTGCGGATCATGCTGGATTTCTCTTCCACCAGGTTaGTCTCGTCATCCTTCTTCAAGCACTTCAGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: TCGSCWISLPPG*SRHPSSSTSAS Trigger: AGACGCTGAAGTGCTTGAAGAAGGATGACGAGAGCAACCTGGTGGAAGAGAAATCCAGCATGATCCGCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CCA 72 bp | ATGGAGTTGTGCTCATTCTTCAGGGCTTCCAGCCCCTaGATCACTTGCTTGGTCTTAGAGATGATCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: MELCSFFRASSP*ITCLVLEMISS Trigger: GGATGAGATCATCTCTAAGACCAAGCAAGTGATCCAGGGGCTGGAAGCCCTGAAGAATGAGCACAACTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CAA 90 bp | TACTGTGCTGCTGCTGGATTCCTTGTCCTGGTTCGTCCTCGTCATTaGGGAAGAGATCATCCAACGGCTCTTTGGAAGAATCAGAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: YCAAAGFLVLVRPRH*GRDHPTALWKNQSL Trigger: AAGACTCTGATTCTTCCAAAGAGCCGTTGGATGATCTCTTCCCAAATGACGAGGACGAACCAGGACAAGGAATCCAGCAGCAGCACAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000239017.2 |
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| CDS CCA 72 bp | TGTGAACATTGTCAAGACCCTGCTTACGTGACCTCATaGCGGCTTCTTCCAATGTCTCTGCAGCTTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: CEHCQDPAYVTS*RLLPMSLQLQT Trigger: AGTTTGAAGCTGCAGAGACATTGGAAGAAGCCGCCATGAGGTCACGTAAGCAGGGTCTTGACAATGTTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000134578.2 ENSMUST00000239017.2 |
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| CDS CAA 72 bp | TTTTTCAAGGTGGTTGTGACGGTGGGACTGTCCACTTaGCAGGCTTTATACCAGCCGCCATACTCTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: FFKVVVTVGLST*QALYQPPYSPK Trigger: TTTTGGAGAGTATGGCGGCTGGTATAAAGCCTGCAAAGTGGACAGTCCCACCGTCACAACCACCTTGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000084941.12 ENSMUST00000118471.8 ENSMUST00000120544.9 ENSMUST00000122300.8 ENSMUST00000134578.2 ENSMUST00000239017.2 |
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| CDS CAA 72 bp | CAGTGTTCTCGAGTCTGCCAGACCATTATTTCGTTCTaGGAAGCAATCTTCTGTGGCTTTGCCACCCGCATT | + |
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Preference number: 6 (lower is better) Translates to: QCSRVCQTIISF*EAIFCGFATRI Trigger: AATGCGGGTGGCAAAGCCACAGAAGATTGCTTCCAAGAACGAAATAATGGTCTGGCAGACTCGAGAACACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| CDS CCA 72 bp | AGTGTTCTCGAGTCTGCCAGACCATTATTTCGTTCTTaGAAGCAATCTTCTGTGGCTTTGCCACCCGCATTA | + |
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Preference number: 6 (lower is better) Translates to: SVLESARPLFRS*KQSSVALPPAL Trigger: TAATGCGGGTGGCAAAGCCACAGAAGATTGCTTCCAAGAACGAAATAATGGTCTGGCAGACTCGAGAACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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| CDS CAA 72 bp | CCATTATTTCGTTCTTGGAAGCAATCTTCTGTGGCTTaGCCACCCGCATTAAGAACACCCAGAGAATTGGCG | + |
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Preference number: 6 (lower is better) Translates to: PLFRSWKQSSVA*PPALRTPRELA Trigger: CGCCAATTCTCTGGGTGTTCTTAATGCGGGTGGCAAAGCCACAGAAGATTGCTTCCAAGAACGAAATAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239017.2 |
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