Pregenerated sensors for KLB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029195Ensembl transcript IDs: ENSMUST00000031096.11, ENSMUST00000205084.2
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCACTGCTCAGAAGTGGCAGGGGGAGGCCGAGATGGGAGTGGGTTaGGTGGTACAACGTCACCATGGGGAAGACGCCCAGCTTCAGTCC | + |
|
Preference number: 1 (lower is better) Translates to: PTAQKWQGEAEMGVG*VVQRHHGEDAQLQS Trigger: GGACTGAAGCTGGGCGTCTTCCCCATGGTGACGTTGTACCACCCAACCCACTCCCATCTCGGCCTCCCCCTGCCACTTCTGAGCAGTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| 3UTR CCA 90 bp | AGTGACTCCCCAAGAGAAATCACAGGGGAACCGACCCTTCATGTCTaGCGTGGACTCTTTCAAAGGGAAGCCGTTGTCTTGTATGATCTG | + |
|
Preference number: 1 (lower is better) Translates to: SDSPREITGEPTLHV*RGLFQREAVVLYDL Trigger: CAGATCATACAAGACAACGGCTTCCCTTTGAAAGAGTCCACGCCAGACATGAAGGGTCGGTTCCCCTGTGATTTCTCTTGGGGAGTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| 3UTR TCA 90 bp | AGGGTGTCTTCAGCTCGGAGAACGGACTCACTGATTGTCGGGACCTaGAGGAATTATTTGAACCACACTTCAGAGGCATCGATTGTCTTC | + |
|
Preference number: 1 (lower is better) Translates to: RVSSARRTDSLIVGT*RNYLNHTSEASIVF Trigger: GAAGACAATCGATGCCTCTGAAGTGTGGTTCAAATAATTCCTTCAGGTCCCGACAATCAGTGAGTCCGTTCTCCGAGCTGAAGACACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| 3UTR TCA 90 bp | TCATGTCTGGCGTGGACTCTTTCAAAGGGAAGCCGTTGTCTTGTATaGTCTGCTTGTAGTAATGAGCCGAGGACTTGGGTTTCCTCTCTT | + |
|
Preference number: 1 (lower is better) Translates to: SCLAWTLSKGSRCLV*SACSNEPRTWVSSL Trigger: AAGAGAGGAAACCCAAGTCCTCGGCTCATTACTACAAGCAGATCATACAAGACAACGGCTTCCCTTTGAAAGAGTCCACGCCAGACATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGGAGGCCGAGATGGGAGTGGGTTGGGTGGTACAACGTCACCATGGGGAAGCCTTCATGTCTGGCGTaGACTCTTTCAAAGGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: RGRPRWEWVGWYNVTMGKPSCLA*TLSKGS Trigger: GCTTCCCTTTGAAAGAGTCCACGCCAGACATGAAGG...CTTCCCCATGGTGACGTTGTACCACCCAACCCACTCCCATCTCGGCCTCCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| 3UTR CAA 90 bp | TCATTACTCGTGCGGTTGTACATGTCACTCAGCCTGTTAGGCTCATaGATGGTGATCCAGAGCTTCACCAAGTCCCCCAACTCCCGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SLLVRLYMSLSLLGS*MVIQSFTKSPNSRK Trigger: CTTCCGGGAGTTGGGGGACTTGGTGAAGCTCTGGATCACCATCAATGAGCCTAACAGGCTGAGTGACATGTACAACCGCACGAGTAATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| 3UTR CAA 90 bp | ACCCTTCATGTCTGGCGTGGACTCTTTCAAAGGGAAGCCGTTGTCTaGTATGATCTGCTTGTAGTAATGAGCCGAGGACTTGGGTTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: TLHVWRGLFQREAVV*YDLLVVMSRGLGFP Trigger: AGGAAACCCAAGTCCTCGGCTCATTACTACAAGCAGATCATACAAGACAACGGCTTCCCTTTGAAAGAGTCCACGCCAGACATGAAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| 3UTR-3UTR CCA 90 bp | CACTTGTCTGTTAACTTTGGACAGATTGCCAGTGGGAAGGATAGAGGTCCAGTCAATGAGCCGAGGACTTaGGTTTCCTCTCTTTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: HLSVNFGQIASGKDRGPVNEPRT*VSSLSA Trigger: AGCAGAAAGAGAGGAAACCCAAGTCCTCGGCTCATT...GACTGGACCTCTATCCTTCCCACTGGCAATCTGTCCAAAGTTAACAGACAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCTTCATGTCTGGCGTGGACTCTTTCAAAGGGAAGCCGTTGTCTTGTATGATCGGTTTCCTCTCTTTCTaGTCACTGTTAAAGTCCACA | + |
|
Preference number: 2 (lower is better) Translates to: PFMSGVDSFKGKPLSCMIGFLSF*SLLKST Trigger: TGTGGACTTTAACAGTGAGCAGAAAGAGAGGAAACC...GATCATACAAGACAACGGCTTCCCTTTGAAAGAGTCCACGCCAGACATGAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTCTGTTAACTTTGGACAGATTGCCAGTGGGAAGGATAGAGGTCCAGTCCAGATCTGTGCACTGGGATaGTCTTGTTTTCAGCCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: LSVNFGQIASGKDRGPVQICALG*SCFQPY Trigger: GTAAGGCTGAAAACAAGACCATCCCAGTGCACAGAT...CTGGACTGGACCTCTATCCTTCCCACTGGCAATCTGTCCAAAGTTAACAGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGAGCCGGAGTGAATCTTaGAACTATGACAGAAATGGC | + |
|
Preference number: 2 (lower is better) Translates to: FRGIDCLHLGYSCLSHRKSRSES*NYDRNG Trigger: GCCATTTCTGTCATAGTTTCAAGATTCACTCCGGCT...CTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| 3UTR CAA 90 bp | AGGAATTATTTGAACCACACTTCAGAGGCATCGATTGTCTTCACCTaGGTTACAGCTGTCTCTCACATCGTAAGTTACCAGTACATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: RNYLNHTSEASIVFT*VTAVSHIVSYQYME Trigger: CTCCATGTACTGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTGGTTCAAATAATTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| 3UTR-3UTR GCA 90 bp | CTGTTAACTTTGGACAGATTGCCAGTGGGAAGGATAGAGGTCCAGTCCAGAGCAGGTGACTTTCATTTTTaGCAACATTTCAACTCGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLTLDRLPVGRIEVQSRAGDFHF*QHFNSF Trigger: AAACGAGTTGAAATGTTGGCAAAAATGAAAGTCACC...TGCTCTGGACTGGACCTCTATCCTTCCCACTGGCAATCTGTCCAAAGTTAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| 3UTR-3UTR TCA 90 bp | TATTTACAGAAGAATGCTAGAGAAAAAGGATGTGAAGTCGTGATTCACACTTCCCTGATTGTCGGGACCTaGAGGAATTATTTGAACCAC | + |
|
Preference number: 2 (lower is better) Translates to: YLQKNAREKGCEVVIHTSLIVGT*RNYLNH Trigger: GTGGTTCAAATAATTCCTTCAGGTCCCGACAATCAG...GGAAGTGTGAATCACGACTTCACATCCTTTTTCTCTAGCATTCTTCTGTAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| 3UTR CCA 72 bp | CCCCCACTGCTCAGAAGTGGCAGGGGGAGGCCGAGATaGGAGTGGGTTGGGTGGTACAACGTCACCATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PPLLRSGRGRPR*EWVGWYNVTMG Trigger: CCCCATGGTGACGTTGTACCACCCAACCCACTCCCATCTCGGCCTCCCCCTGCCACTTCTGAGCAGTGGGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| 3UTR CCA 72 bp | AGTGGCAGGGGGAGGCCGAGATGGGAGTGGGTTGGGTaGTACAACGTCACCATGGGGAAGACGCCCAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SGRGRPRWEWVG*YNVTMGKTPSF Trigger: GAAGCTGGGCGTCTTCCCCATGGTGACGTTGTACCACCCAACCCACTCCCATCTCGGCCTCCCCCTGCCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| 3UTR CCA 72 bp | CCAAGAGAAATCACAGGGGAACCGACCCTTCATGTCTaGCGTGGACTCTTTCAAAGGGAAGCCGTTGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PREITGEPTLHV*RGLFQREAVVL Trigger: CAAGACAACGGCTTCCCTTTGAAAGAGTCCACGCCAGACATGAAGGGTCGGTTCCCCTGTGATTTCTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| 3UTR TCA 72 bp | AGCAATCTGTTGCCAGTGACATTCCACACATACAGGTaGGGATCGGTAAACTGCGGGGAGGAGACCGTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SNLLPVTFHTYR*GSVNCGEETVN Trigger: GTTTACGGTCTCCTCCCCGCAGTTTACCGATCCTCACCTGTATGTGTGGAATGTCACTGGCAACAGATTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| 3UTR TCA 72 bp | TCAGCTCGGAGAACGGACTCACTGATTGTCGGGACCTaGAGGAATTATTTGAACCACACTTCAGAGGCATCG | + |
|
Preference number: 3 (lower is better) Translates to: SARRTDSLIVGT*RNYLNHTSEAS Trigger: CGATGCCTCTGAAGTGTGGTTCAAATAATTCCTTCAGGTCCCGACAATCAGTGAGTCCGTTCTCCGAGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| 3UTR TCA 72 bp | TACAGAAGAATGCTAGAGAAAAAGGATGTGAAGTCGTaGTTCACACTTCCTGAAGCGATGTTTAGGGTCACG | + |
|
Preference number: 3 (lower is better) Translates to: YRRMLEKKDVKS*FTLPEAMFRVT Trigger: CGTGACCCTAAACATCGCTTCAGGAAGTGTGAATCACGACTTCACATCCTTTTTCTCTAGCATTCTTCTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| 3UTR-3UTR CAA 90 bp | TATTTACAGAAGAATGCTAGAGAAAAAGGATGTGAAGTCGTGATTCACACTTCCTCGATTGTCTTCACCTaGGTTACAGCTGTCTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: YLQKNAREKGCEVVIHTSSIVFT*VTAVSH Trigger: GTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGA...GGAAGTGTGAATCACGACTTCACATCCTTTTTCTCTAGCATTCTTCTGTAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR GCA 90 bp | AGAACAGACTCAGTGACTCCCCAAGAGAAATCACAGGGGAACCGACCCTTCATGCAGCGAGTCCAGAAGTaGACGGTAGTACCGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: RTDSVTPQEKSQGNRPFMQRVQK*TVVPET Trigger: GGTCTCCGGTACTACCGTGCACTTCTGGACTCGCTG...CATGAAGGGTCGGTTCCCCTGTGATTTCTCTTGGGGAGTCACTGAGTCTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTAACTTTGGACAGATTGCCAGTGGGAAGGATAGAGGTCCAGTCCAGAGCACCCCGTGGATGGGGTTaGCGAACCATCCAAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LLTLDRLPVGRIEVQSRAPRGWG*RTIQAQ Trigger: CTGTGCTTGGATGGTTCGCCAACCCCATCCACGGGG...TGCTCTGGACTGGACCTCTATCCTTCCCACTGGCAATCTGTCCAAAGTTAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTTCATGTCTGGCGTGGACTCTTTCAAAGGGAAGCCGTTGTCTTGTATGATCGCCGTCCCCGTGGATaGGGTTGGCGAACCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLHVWRGLFQREAVVLYDRRPRG*GWRTIQ Trigger: TTGGATGGTTCGCCAACCCCATCCACGGGGACGGCG...ATCATACAAGACAACGGCTTCCCTTTGAAAGAGTCCACGCCAGACATGAAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACCAGTACATGGAGCCGGACAGGCGATCTCAAACTaGAGGAAGCGCTCGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLGYSCLSHRKLPVHGAGQAISN*RKRSAA Trigger: GGCAGCCGAGCGCTTCCTCCAGTTTGAGATCGCCTG...TCCGGCTCCATGTACTGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR TCA 90 bp | AACCACACTTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACGCGAGCTTAGGCGGGTaGTGTCCTGCAGGAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NHTSEASIVFTLVTAVSHASLGG*CPAGTG Trigger: TCCAGTTCCTGCAGGACATCACCCGCCTAAGCTCGC...GTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR GCA 90 bp | CACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACCAGTACATGGAGCCGGACCCTTCCACTTGAAATaGTCCGGTCCCAACGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLGYSCLSHRKLPVHGAGPFHLK*SGPNAP Trigger: TGGGGCGTTGGGACCGGAGCATTTCAAGTGGAAGGG...TCCGGCTCCATGTACTGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| 3UTR CAA 72 bp | GTGCGGTTGTACATGTCACTCAGCCTGTTAGGCTCATaGATGGTGATCCAGAGCTTCACCAAGTCCCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VRLYMSLSLLGS*MVIQSFTKSPN Trigger: GTTGGGGGACTTGGTGAAGCTCTGGATCACCATCAATGAGCCTAACAGGCTGAGTGACATGTACAACCGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTAACTTTGGACAGATTGCCAGTGGGAAGGATAGAGGTCCAGTCCAGAGCACAACTCCCTTCCACTTaGAATGCTCCGGTCCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: LLTLDRLPVGRIEVQSRAQLPST*NAPVPT Trigger: CGTTGGGACCGGAGCATTTCAAGTGGAAGGGAGTTG...TGCTCTGGACTGGACCTCTATCCTTCCCACTGGCAATCTGTCCAAAGTTAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR GCA 90 bp | CACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACCAGTACATGGAGCCGGACACCTCCTCCTTCTCTaGCTCAGAGAACTCGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HLGYSCLSHRKLPVHGAGHLLLL*LRELGD Trigger: ATCCCCGAGTTCTCTGAGGCAGAGAAGGAGGAGGTG...TCCGGCTCCATGTACTGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTAGGCGGGTGATGTCCTaGAGGAACTGGACGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEASIVFTLVTAVSHIVSRRVMS*RNWTSL Trigger: CAGGGACGTCCAGTTCCTGCAGGACATCACCCGCCT...ACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | TTGAACCACACTTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCCCCGTGGATGGGGTTaGCGAACCATCCAAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LNHTSEASIVFTLVTAVSPRGWG*RTIQAQ Trigger: CTGTGCTTGGATGGTTCGCCAACCCCATCCACGGGG...AGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTGGTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | CTCTCACATCGTAAGTTACCAGTACATGGAGCCGGAGTGAATCTTGAAACTATGCGCCGTCCCCGTGGATaGGGTTGGCGAACCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHRKLPVHGAGVNLETMRRPRG*GWRTIQ Trigger: TTGGATGGTTCGCCAACCCCATCCACGGGGACGGCG...CATAGTTTCAAGATTCACTCCGGCTCCATGTACTGGTAACTTACGATGTGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR TCA 90 bp | CTCCCCAAGAGAAATCACAGGGGAACCGACCCTTCATGTCTGGCGTGGACTCTTCCGTGGCCAGGAGATTaGGAACTGATAAAAAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPKRNHRGTDPSCLAWTLPWPGD*ELIKRN Trigger: GTTTCTTTTTATCAGTTCTCAATCTCCTGGCCACGG...AAGAGTCCACGCCAGACATGAAGGGTCGGTTCCCCTGTGATTTCTCTTGGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR TCA 90 bp | CGTGATTCACACTTCCTGAAGCGATGTTTAGGGTCACGCCCAGAGTTACTGTCATTTCACCACGGTGTTTaGGGGCCTGAAGTTGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDSHFLKRCLGSRPELLSFHHGV*GPEVVG Trigger: CCCAACAACTTCAGGCCCTCAAACACCGTGGTGAAA...TGACAGTAACTCTGGGCGTGACCCTAAACATCGCTTCAGGAAGTGTGAATCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR GCA 90 bp | ACTGGGATGGTCTTGTTTTCAGCCTTACCCCTTCCACTCGGTAGAGCAATCTGTTTGCTCCTCCTTCTCTaGCTCAGAGAACTCGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGMVLFSALPLPLGRAICLLLLL*LRELGD Trigger: ATCCCCGAGTTCTCTGAGGCAGAGAAGGAGGAGCAA...ACAGATTGCTCTACCGAGTGGAAGGGGTAAGGCTGAAAACAAGACCATCCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACCAGTACATGGAGCCGGACTGCTACTGTTCCATTaGGAAACAACCGTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLGYSCLSHRKLPVHGAGLLLFH*ETTVAR Trigger: CCTGGCCACGGTTGTTTCCCAATGGAACAGTAGCAG...TCCGGCTCCATGTACTGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | CATCGTAAGTTACCAGTACATGGAGCCGGAGTGAATCTTGAAACTATGACAGAAAGGGGGAGGCCGAGATaGGAGTGGGTTGGGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HRKLPVHGAGVNLETMTERGRPR*EWVGWY Trigger: GTACCACCCAACCCACTCCCATCTCGGCCTCCCCCT...TTCTGTCATAGTTTCAAGATTCACTCCGGCTCCATGTACTGGTAACTTACGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR GCA 90 bp | CCAGTCCAGAGCAAACTGGTAGTGGGTGACTTTCATTTTTGCCAACATTTCAACCCCTTCCACTTGAAATaGTCCGGTCCCAACGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVQSKLVVGDFHFCQHFNPFHLK*SGPNAP Trigger: TGGGGCGTTGGGACCGGAGCATTTCAAGTGGAAGGG...GTTGAAATGTTGGCAAAAATGAAAGTCACCCACTACCAGTTTGCTCTGGACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCACATCGTAAGTTACCAGTACATGGAGCCGGAGTGAATCTTGAAACTATGCAGCGAGTCCAGAAGTaGACGGTAGTACCGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LSHRKLPVHGAGVNLETMQRVQK*TVVPET Trigger: GGTCTCCGGTACTACCGTGCACTTCTGGACTCGCTG...CATAGTTTCAAGATTCACTCCGGCTCCATGTACTGGTAACTTACGATGTGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR GCA 90 bp | CCTTACCCCTTCCACTCGGTAGAGCAATCTGTTGCCAGTGACATTCCACACATAGTGCATGCATACCTGTaGCAAACCCATGCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PYPFHSVEQSVASDIPHIVHAYL*QTHAKQ Trigger: TTGCTTGGCATGGGTTTGGCACAGGTATGCATGCAC...TATGTGTGGAATGTCACTGGCAACAGATTGCTCTACCGAGTGGAAGGGGTAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCTTCAGTCCTTCGCTCACCACACACCTATAGTACCTTAACACTTGTCTGTCTGCTACTGTTCCATTaGGAAACAACCGTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PASVLRSPHTYSTLTLVCLLLFH*ETTVAR Trigger: CCTGGCCACGGTTGTTTCCCAATGGAACAGTAGCAG...ACAGACAAGTGTTAAGGTACTATAGGTGTGTGGTGAGCGAAGGACTGAAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR CCA 90 bp | AACCACACTTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACCCGACCCTTCATGTCTaGCGTGGACTCTTTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NHTSEASIVFTLVTAVSHPTLHV*RGLFQR Trigger: CCTTTGAAAGAGTCCACGCCAGACATGAAGGGTCGG...GTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR GCA 90 bp | TTGTCTGTTAACTTTGGACAGATTGCCAGTGGGAAGGATAGAGGTCCAGTCCAGTCCCTTCTCTCCTGGTaGATGCATACCTGTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSVNFGQIASGKDRGPVQSLLSW*MHTCAK Trigger: TTTGGCACAGGTATGCATGCACCAGGAGAGAAGGGA...CTGGACTGGACCTCTATCCTTCCCACTGGCAATCTGTCCAAAGTTAACAGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR GCA 90 bp | CACACTTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCAGTGAAGTGGTTCAGTaGGTAGAAGTCGACGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: HTSEASIVFTLVTAVSHISEVVQ*VEVDGT Trigger: GGTACCGTCGACTTCTACGCACTGAACCACTTCACT...GATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | ACCCTTCATGTCTGGCGTGGACTCTTTCAAAGGGAAGCCGTTGTCTTGTATGATATTTCCCTTCTCTCCTaGTGCATGCATACCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLHVWRGLFQREAVVLYDISLLS*CMHTCA Trigger: GGCACAGGTATGCATGCACCAGGAGAGAAGGGAAAT...ATCATACAAGACAACGGCTTCCCTTTGAAAGAGTCCACGCCAGACATGAAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACCAGTACATGTGCCAGACCTGGGCATaGGCGATCATCAGGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IVFTLVTAVSHIVSYQYMCQTWA*AIIRLW Trigger: CCACAACCTGATGATCGCCCATGCCCAGGTCTGGCA...CATGTACTGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| 3UTR CAA 72 bp | GTCTGGCGTGGACTCTTTCAAAGGGAAGCCGTTGTCTaGTATGATCTGCTTGTAGTAATGAGCCGAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: VWRGLFQREAVV*YDLLVVMSRGL Trigger: AAGTCCTCGGCTCATTACTACAAGCAGATCATACAAGACAACGGCTTCCCTTTGAAAGAGTCCACGCCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGGTGCATGCATACCTGTaGCAAACCCATGCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FRGIDCLHLGYSCLSHRKVHAYL*QTHAKQ Trigger: TTGCTTGGCATGGGTTTGGCACAGGTATGCATGCAC...CTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR GCA 90 bp | TTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACCAGTACATGGAGCCGCTTGAAGAGCGGATCTaGAAACCAGGCGATCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FTLVTAVSHIVSYQYMEPLEERI*KPGDLK Trigger: TTTGAGATCGCCTGGTTTGCAGATCCGCTCTTCAAG...CGGCTCCATGTACTGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | GAACCACACTTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCAAATGAGCCGAGGACTTaGGTTTCCTCTCTTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EPHFRGIDCLHLGYSCLSNEPRT*VSSLSA Trigger: AGCAGAAAGAGAGGAAACCCAAGTCCTCGGCTCATT...TGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTGGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | TTGAACCACACTTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTAGTCCTGGAAGGCCTTaGCTGTGTTCATGTTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNHTSEASIVFTLVTAVSSPGRP*LCSCLA Trigger: GGCTAAACATGAACACAGCCAAGGCCTTCCAGGACT...AGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTGGTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR TCA 90 bp | ATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACCAGTACATGGGAGGCCACTGCTGCTaGTCAGCTTGCTGTAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: IVFTLVTAVSHIVSYQYMGGHCC*SACCKT Trigger: AGTTTTACAGCAAGCTGATCAGCAGCAGTGGCCTCC...CATGTACTGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR GCA 90 bp | CACTTGTCTGTTAACTTTGGACAGATTGCCAGTGGGAAGGATAGAGGTCCAGTCGGCAGATCTTTGCAGTaGCCTGTTGGACATTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HLSVNFGQIASGKDRGPVGRSLQ*PVGHCF Trigger: AAAACAATGTCCAACAGGGCACTGCAAAGATCTGCC...GACTGGACCTCTATCCTTCCCACTGGCAATCTGTCCAAAGTTAACAGACAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTATCCCTTCTCTCCTGGTaGATGCATACCTGTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGIDCLHLGYSCLSHRKLSLLSW*MHTCAK Trigger: TTTGGCACAGGTATGCATGCACCAGGAGAGAAGGGA...TAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | CTCTCACATCGTAAGTTACCAGTACATGGAGCCGGAGTGAATCTTGAAACTATGTTTGGCTCTATCCAATaGGACCCCAAGGTGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSHRKLPVHGAGVNLETMFGSIQ*DPKVME Trigger: CTCCATCACCTTGGGGTCCCATTGGATAGAGCCAAA...CATAGTTTCAAGATTCACTCCGGCTCCATGTACTGGTAACTTACGATGTGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | TCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACCAGTACCCTTCATGTCTGGCGTaGACTCTTTCAAAGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIVFTLVTAVSHIVSYQYPSCLA*TLSKGS Trigger: GCTTCCCTTTGAAAGAGTCCACGCCAGACATGAAGG...GTACTGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | ATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACCAGTACATGGAGATGGGAGTGGGTTaGGTGGTACAACGTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: IVFTLVTAVSHIVSYQYMEMGVG*VVQRHH Trigger: ATGGTGACGTTGTACCACCCAACCCACTCCCATCTC...CATGTACTGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | AGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACTGCAACTGAGCGGTTaGTGTTCAGCTGCTTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RGIDCLHLGYSCLSHRKLLQLSG*CSAACV Trigger: TACACAAGCAGCTGAACACCAACCGCTCAGTTGCAG...TAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | CGTGATTCACACTTCCTGAAGCGATGTTTAGGGTCACGCCCAGAGTTACTGTCAACCGAAGAAGATGAGTaGTTTCTTCTCCACGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDSHFLKRCLGSRPELLSTEEDE*FLLHEK Trigger: TTTCTCGTGGAGAAGAAACCACTCATCTTCTTCGGT...TGACAGTAACTCTGGGCGTGACCCTAAACATCGCTTCAGGAAGTGTGAATCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR TCA 90 bp | CACACTTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCTCCGAAATCAAGATTTaGGGGTCATCGTATTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HTSEASIVFTLVTAVSHISEIKI*GSSYSS Trigger: ACTGGAATACGATGACCCTCAAATCTTGATTTCGGA...GATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR TCA 90 bp | CTCTCACATCGTAAGTTACCAGTACATGGAGCCGGAGTGAATCTTGAAACTATGGCAATCTGTTGCCAGTaGCATTCCACACATACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSHRKLPVHGAGVNLETMAICCQ*HSTHTG Trigger: ACCTGTATGTGTGGAATGTCACTGGCAACAGATTGC...CATAGTTTCAAGATTCACTCCGGCTCCATGTACTGGTAACTTACGATGTGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTGGCAGATCTTTGCAGTaGCCTGTTGGACATTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SEASIVFTLVTAVSHIVSGRSLQ*PVGHCF Trigger: AAAACAATGTCCAACAGGGCACTGCAAAGATCTGCC...ACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTTGCGCATTCACTGCTaGTACTGTTCCATTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SEASIVFTLVTAVSHIVSLRIHC*YCSIGK Trigger: TTTCCCAATGGAACAGTAGCAGCAGTGAATGCGCAA...ACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | ATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACCAGTACATGATTTCCCTTCTCTCCTaGTGCATGCATACCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IVFTLVTAVSHIVSYQYMISLLS*CMHTCA Trigger: GGCACAGGTATGCATGCACCAGGAGAGAAGGGAAAT...CATGTACTGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| 3UTR CAA 72 bp | TTGAACCACACTTCAGAGGCATCGATTGTCTTCACCTaGGTTACAGCTGTCTCTCACATCGTAAGTTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNHTSEASIVFT*VTAVSHIVSYQ Trigger: CTGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTGGTTCAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR TCA 90 bp | TATTTACAGAAGAATGCTAGAGAAAAAGGATGTGAAGTCGTGATTCACACTTCCCAACTCCCTTCCACTTaGAATGCTCCGGTCCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: YLQKNAREKGCEVVIHTSQLPST*NAPVPT Trigger: CGTTGGGACCGGAGCATTTCAAGTGGAAGGGAGTTG...GGAAGTGTGAATCACGACTTCACATCCTTTTTCTCTAGCATTCTTCTGTAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR GCA 90 bp | GAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACGGTTTCCTCTCTTTCTaGTCACTGTTAAAGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: EASIVFTLVTAVSHIVSYGFLSF*SLLKST Trigger: TGTGGACTTTAACAGTGAGCAGAAAGAGAGGAAACC...GTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | CTCTCACATCGTAAGTTACCAGTACATGGAGCCGGAGTGAATCTTGAAACTATGATCTGTGCACTGGGATaGTCTTGTTTTCAGCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSHRKLPVHGAGVNLETMICALG*SCFQPY Trigger: GTAAGGCTGAAAACAAGACCATCCCAGTGCACAGAT...CATAGTTTCAAGATTCACTCCGGCTCCATGTACTGGTAACTTACGATGTGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | TATTTACAGAAGAATGCTAGAGAAAAAGGATGTGAAGTCGTGATTCACACTTCCGGTACAACGTCACCATaGGGAAGACGCCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLQKNAREKGCEVVIHTSGTTSP*GRRPAS Trigger: TGAAGCTGGGCGTCTTCCCCATGGTGACGTTGTACC...GGAAGTGTGAATCACGACTTCACATCCTTTTTCTCTAGCATTCTTCTGTAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | TATTTACAGAAGAATGCTAGAGAAAAAGGATGTGAAGTCGTGATTCACACTTCCAATCCACAAAGGGGTTaGCAGGTTCTGCCCAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YLQKNAREKGCEVVIHTSNPQRG*QVLPSR Trigger: GCGACTGGGCAGAACCTGCCAACCCCTTTGTGGATT...GGAAGTGTGAATCACGACTTCACATCCTTTTTCTCTAGCATTCTTCTGTAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | AACCACACTTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACCTGAAAACTCTGCTGTaGCCTTTCTTCAATGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: NHTSEASIVFTLVTAVSHLKTLL*PFFNGI Trigger: TATACCATTGAAGAAAGGCCACAGCAGAGTTTTCAG...GTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR TCA 90 bp | CATCGTAAGTTACCAGTACATGGAGCCGGAGTGAATCTTGAAACTATGACAGAAGCACCTGCCTTAAGTTaGGTGATACATTTTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRKLPVHGAGVNLETMTEAPALS*VIHFVP Trigger: TGGGACAAAATGTATCACTCAACTTAAGGCAGGTGC...TTCTGTCATAGTTTCAAGATTCACTCCGGCTCCATGTACTGGTAACTTACGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR TCA 90 bp | TCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACCAGTACCAAACTGGTAGTGGGTaGCTTTCATTTTTGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: SIVFTLVTAVSHIVSYQYQTGSG*LSFLPT Trigger: TGTTGGCAAAAATGAAAGTCACCCACTACCAGTTTG...GTACTGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | TATTTACAGAAGAATGCTAGAGAAAAAGGATGTGAAGTCGTGATTCACACTTCCATGTCCTGCAGGAACTaGACGTCCCTGTCTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: YLQKNAREKGCEVVIHTSMSCRN*TSLSAT Trigger: AGTTGCAGACAGGGACGTCCAGTTCCTGCAGGACAT...GGAAGTGTGAATCACGACTTCACATCCTTTTTCTCTAGCATTCTTCTGTAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR GCA 90 bp | TGTTATTTACAGAAGAATGCTAGAGAAAAAGGATGTGAAGTCGTGATTCACACTCAAAGAAATCAGCCGTaGCCCTCACCTCCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CYLQKNAREKGCEVVIHTQRNQP*PSPPPS Trigger: AGAAGGAGGAGGTGAGGGGCACGGCTGATTTCTTTG...AGTGTGAATCACGACTTCACATCCTTTTTCTCTAGCATTCTTCTGTAAATAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | CATCGTAAGTTACCAGTACATGGAGCCGGAGTGAATCTTGAAACTATGACAGAATCATGTAGATGGCCGTaGTGTCCTCTGTCTTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: HRKLPVHGAGVNLETMTESCRWP*CPLSLY Trigger: ATATAAAGACAGAGGACACCACGGCCATCTACATGA...TTCTGTCATAGTTTCAAGATTCACTCCGGCTCCATGTACTGGTAACTTACGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CCA 90 bp | TGTTATTTACAGAAGAATGCTAGAGAAAAAGGATGTGAAGTCGTGATTCACACTTCTTCATCATGTAGATaGCCGTGGTGTCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CYLQKNAREKGCEVVIHTSSSCR*PWCPLS Trigger: AGACAGAGGACACCACGGCCATCTACATGATGAAGA...AGTGTGAATCACGACTTCACATCCTTTTTCTCTAGCATTCTTCTGTAAATAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR TCA 90 bp | TGTTATTTACAGAAGAATGCTAGAGAAAAAGGATGTGAAGTCGTGATTCACACTCCGTGGCCAGGAGATTaGGAACTGATAAAAAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CYLQKNAREKGCEVVIHTPWPGD*ELIKRN Trigger: GTTTCTTTTTATCAGTTCTCAATCTCCTGGCCACGG...AGTGTGAATCACGACTTCACATCCTTTTTCTCTAGCATTCTTCTGTAAATAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR GCA 90 bp | CATCGTAAGTTACCAGTACATGGAGCCGGAGTGAATCTTGAAACTATGACAGAAGGTGACTTTCATTTTTaGCAACATTTCAACTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HRKLPVHGAGVNLETMTEGDFHF*QHFNSF Trigger: AAACGAGTTGAAATGTTGGCAAAAATGAAAGTCACC...TTCTGTCATAGTTTCAAGATTCACTCCGGCTCCATGTACTGGTAACTTACGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS TCA 90 bp | CTCCCCAGGGTGTTACAGCCAGGCGGCTGGGCGAGCTTAGGCGGGTaGTGTCCTGCAGGAACTGGACGTCCCTGTCTGCAACTGAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPRVLQPGGWASLGG*CPAGTGRPCLQLSG Trigger: ACCGCTCAGTTGCAGACAGGGACGTCCAGTTCCTGCAGGACATCACCCGCCTAAGCTCGCCCAGCCGCCTGGCTGTAACACCCTGGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CCA 90 bp | GCCAGGCGGCTGGGCGAGCTTAGGCGGGTGATGTCCTGCAGGAACTaGACGTCCCTGTCTGCAACTGAGCGGTTGGTGTTCAGCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ARRLGELRRVMSCRN*TSLSATERLVFSCL Trigger: CAAGCAGCTGAACACCAACCGCTCAGTTGCAGACAGGGACGTCCAGTTCCTGCAGGACATCACCCGCCTAAGCTCGCCCAGCCGCCTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS GCA 90 bp | GGTGTTACAGCCAGGCGGCTGGGCGAGCTTAGGCGGGTGATGTCCTaGAGGAACTGGACGTCCCTGTCTGCAACTGAGCGGTTGGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GVTARRLGELRRVMS*RNWTSLSATERLVF Trigger: GAACACCAACCGCTCAGTTGCAGACAGGGACGTCCAGTTCCTGCAGGACATCACCCGCCTAAGCTCGCCCAGCCGCCTGGCTGTAACACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CAA 90 bp | AGGGGGAGGCCGAGATGGGAGTGGGTTGGGTGGTACAACGTCACCATGGGGAAGTCCCCGTGGATGGGGTaGGCGAACCATCCAAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: RGRPRWEWVGWYNVTMGKSPWMG*ANHPST Trigger: TGTGCTTGGATGGTTCGCCAACCCCATCCACGGGGA...CTTCCCCATGGTGACGTTGTACCACCCAACCCACTCCCATCTCGGCCTCCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS GCA 90 bp | AGATATCCCTGTCTCTGTAGTTCCTCCGGATCCACGCAAGGAGCTTaGGCACTCCCCAGGGTGTTACAGCCAGGCGGCTGGGCGAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RYPCLCSSSGSTQGA*ALPRVLQPGGWASL Trigger: TAAGCTCGCCCAGCCGCCTGGCTGTAACACCCTGGGGAGTGCGCAAGCTCCTTGCGTGGATCCGGAGGAACTACAGAGACAGGGATATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CCA 90 bp | GGAGGAAGCGCTCGGCTGCCTTCCAGTGTGAATCCACAAAGGGGTTaGCAGGTTCTGCCCAGTCGCAATGTAAGGACAGCGACACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGSARLPSSVNPQRG*QVLPSRNVRTATQP Trigger: GGGCTGTGTCGCTGTCCTTACATTGCGACTGGGCAGAACCTGCCAACCCCTTTGTGGATTCACACTGGAAGGCAGCCGAGCGCTTCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CCA 90 bp | TCGCCAGTCTTGAAGAGCGGATCTGCAAACCAGGCGATCTCAAACTaGAGGAAGCGCTCGGCTGCCTTCCAGTGTGAATCCACAAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPVLKSGSANQAISN*RKRSAAFQCESTKG Trigger: CCCCTTTGTGGATTCACACTGGAAGGCAGCCGAGCGCTTCCTCCAGTTTGAGATCGCCTGGTTTGCAGATCCGCTCTTCAAGACTGGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS GCA 90 bp | GTTCAGCTGCTTGTGTATCACGAACCTCGTAGTGAAGTGGTTCAGTaGGTAGAAGTCGACGGTACCCTTCACCAGCCTGCTCTCCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: VQLLVYHEPRSEVVQ*VEVDGTLHQPALLR Trigger: GCGAAGGAGAGCAGGCTGGTGAAGGGTACCGTCGACTTCTACGCACTGAACCACTTCACTACGAGGTTCGTGATACACAAGCAGCTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS TCA 90 bp | GTAACTGTCAGTGGATCTGTCTGTGCCGTTGACACCTCTCAGGTGTaGGTAGACGTACCGATCCCAGATCGAGGGTCCTCTTCCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VTVSGSVCAVDTSQV*VDVPIPDRGSSSIC Trigger: ACAGATGGAAGAGGACCCTCGATCTGGGATCGGTACGTCTACTCACACCTGAGAGGTGTCAACGGCACAGACAGATCCACTGACAGTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS GCA 90 bp | TTCCTTCATAACCGATGGATAGTCGCCAGTCTTGAAGAGCGGATCTaGAAACCAGGCGATCTCAAACTGGAGGAAGCGCTCGGCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FLHNRWIVASLEERI*KPGDLKLEEALGCL Trigger: AAGGCAGCCGAGCGCTTCCTCCAGTTTGAGATCGCCTGGTTTGCAGATCCGCTCTTCAAGACTGGCGACTATCCATCGGTTATGAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CCA 90 bp | TGGATGGGGTTGGCGAACCATCCAAGCACAGAGGACATGGAGTGCTaGCAGTTGATCACGTCCTCCATGTTGTCTGTTCTGTTTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WMGLANHPSTEDMEC*QLITSSMLSVLFGS Trigger: AGAGCCAAACAGAACAGACAACATGGAGGACGTGATCAACTGCCAGCACTCCATGTCCTCTGTGCTTGGATGGTTCGCCAACCCCATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS CCA 90 bp | CAGCCCTCGCTGGTTCTTGGAGGCGATGTATTCCTTCATAACCGATaGATAGTCGCCAGTCTTGAAGAGCGGATCTGCAAACCAGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: QPSLVLGGDVFLHNR*IVASLEERICKPGD Trigger: ATCGCCTGGTTTGCAGATCCGCTCTTCAAGACTGGCGACTATCCATCGGTTATGAAGGAATACATCGCCTCCAAGAACCAGCGAGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CAA 90 bp | AGAACAGACTCAGTGACTCCCCAAGAGAAATCACAGGGGAACCGACCCTTCATGCCAACTCCCTTCCACTaGAAATGCTCCGGTCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RTDSVTPQEKSQGNRPFMPTPFH*KCSGPN Trigger: GTTGGGACCGGAGCATTTCAAGTGGAAGGGAGTTGG...CATGAAGGGTCGGTTCCCCTGTGATTTCTCTTGGGGAGTCACTGAGTCTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR CAA 90 bp | AGGGGGAGGCCGAGATGGGAGTGGGTTGGGTGGTACAACGTCACCATGGGGAAGATTGTAATCCAATATTaGACACGGTCTCCAAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RGRPRWEWVGWYNVTMGKIVIQY*TRSPKV Trigger: GACCTTTGGAGACCGTGTCAAATATTGGATTACAAT...CTTCCCCATGGTGACGTTGTACCACCCAACCCACTCCCATCTCGGCCTCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR CAA 90 bp | CACACTTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCTCCCCGTGGATGGGGTaGGCGAACCATCCAAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: HTSEASIVFTLVTAVSHISPWMG*ANHPST Trigger: TGTGCTTGGATGGTTCGCCAACCCCATCCACGGGGA...GATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CAA 90 bp | TCTGTTAACTTTGGACAGATTGCCAGTGGGAAGGATAGAGGTCCAGTCCAGAGCGCTGCTACTGTTCCATaGGGAAACAACCGTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVNFGQIASGKDRGPVQSAATVP*GNNRGQ Trigger: CTGGCCACGGTTGTTTCCCAATGGAACAGTAGCAGC...GCTCTGGACTGGACCTCTATCCTTCCCACTGGCAATCTGTCCAAAGTTAACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR CAA 90 bp | CACACTTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGAGGGCCTGAAGTTGTaGGGCCCGAAGGAAAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HTSEASIVFTLVTAVSHIEGLKL*GPKEKA Trigger: TGCCTTTTCCTTCGGGCCCAACAACTTCAGGCCCTC...GATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS TCA 90 bp | CCATGTTGTCTGTTCTGTTTGGCTCTATCCAATGGGACCCCAAGGTaGTGGAGAGCCAACCCTTCTGATGAGGGCGGAAGTTTTTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PCCLFCLALSNGTPR*WRANPSDEGGSFCR Trigger: ACGACAAAAACTTCCGCCCTCATCAGAAGGGTTGGCTCTCCATCACCTTGGGGTCCCATTGGATAGAGCCAAACAGAACAGACAACATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS TCA 90 bp | GGTTGGCGAACCATCCAAGCACAGAGGACATGGAGTGCTGGCAGTTaGTCACGTCCTCCATGTTGTCTGTTCTGTTTGGCTCTATCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GWRTIQAQRTWSAGS*SRPPCCLFCLALSN Trigger: ATTGGATAGAGCCAAACAGAACAGACAACATGGAGGACGTGATCAACTGCCAGCACTCCATGTCCTCTGTGCTTGGATGGTTCGCCAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS TCA 90 bp | GGATCTGATCATCCTCTAGAGCCAGGTCATCGATGCCATTGGCTGTaGTGTAGATATCCCTGTCTCTGTAGTTCCTCCGGATCCACGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GSDHPLEPGHRCHWL*CRYPCLCSSSGSTQ Trigger: TTGCGTGGATCCGGAGGAACTACAGAGACAGGGATATCTACATCACAGCCAATGGCATCGATGACCTGGCTCTAGAGGATGATCAGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS TCA 90 bp | CTTTTTCCAGAAAGATGTAACTGTCAGTGGATCTGTCTGTGCCGTTaGCACCTCTCAGGTGTGAGTAGACGTACCGATCCCAGATCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFPERCNCQWICLCR*HLSGVSRRTDPRSR Trigger: CCTCGATCTGGGATCGGTACGTCTACTCACACCTGAGAGGTGTCAACGGCACAGACAGATCCACTGACAGTTACATCTTTCTGGAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS GCA 90 bp | AGCTCGCAGCAGAACAAACGCAGACAGCACGGCAGATCTTTGCAGTaGCCTGTTGGACATTGTTTTCCTAGAGCGTGTGTTTCTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SSQQNKRRQHGRSLQ*PVGHCFPRACVSFI Trigger: GATGAAAGAAACACACGCTCTAGGAAAACAATGTCCAACAGGGCACTGCAAAGATCTGCCGTGCTGTCTGCGTTTGTTCTGCTGCGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS GCA 90 bp | GTAACAGCTCGCAGCAGAACAAACGCAGACAGCACGGCAGATCTTTaGAGTGCCCTGTTGGACATTGTTTTCCTAGAGCGTGTGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VTARSRTNADSTADL*SALLDIVFLERVFL Trigger: AAGAAACACACGCTCTAGGAAAACAATGTCCAACAGGGCACTGCAAAGATCTGCCGTGCTGTCTGCGTTTGTTCTGCTGCGAGCTGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS-3UTR CAA 90 bp | TTGAACCACACTTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTGATCTGTCTGTGCCGTaGACACCTCTCAGGTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LNHTSEASIVFTLVTAVSDLSVP*TPLRCE Trigger: CTCACACCTGAGAGGTGTCAACGGCACAGACAGATC...AGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTGGTTCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CAA 90 bp | AGAACAGACTCAGTGACTCCCCAAGAGAAATCACAGGGGAACCGACCCTTCATGTGTTGTCTGTTCTGTTaGGCTCTATCCAATGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: RTDSVTPQEKSQGNRPFMCCLFC*ALSNGT Trigger: GGTCCCATTGGATAGAGCCAAACAGAACAGACAACA...CATGAAGGGTCGGTTCCCCTGTGATTTCTCTTGGGGAGTCACTGAGTCTGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR CAA 90 bp | CGTGATTCACACTTCCTGAAGCGATGTTTAGGGTCACGCCCAGAGTTACTGTCAAGCCTGTTAGGCTCATaGATGGTGATCCAGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RDSHFLKRCLGSRPELLSSLLGS*MVIQSF Trigger: GAAGCTCTGGATCACCATCAATGAGCCTAACAGGCT...TGACAGTAACTCTGGGCGTGACCCTAAACATCGCTTCAGGAAGTGTGAATCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CAA 90 bp | GAATTATTTGAACCACACTTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCATCCACGCAAGGAGCTaGCGCACTCCCCAGGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ELFEPHFRGIDCLHLGYSIHARS*RTPQGV Trigger: AACACCCTGGGGAGTGCGCAAGCTCCTTGCGTGGAT...GCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTGGTTCAAATAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CAA 90 bp | TCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACCAGTACCCAACTCCCTTCCACTaGAAATGCTCCGGTCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SIVFTLVTAVSHIVSYQYPTPFH*KCSGPN Trigger: GTTGGGACCGGAGCATTTCAAGTGGAAGGGAGTTGG...GTACTGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CAA 90 bp | CCTTACCCCTTCCACTCGGTAGAGCAATCTGTTGCCAGTGACATTCCACACATAATCACGTCCTCCATGTaGTCTGTTCTGTTTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PYPFHSVEQSVASDIPHIITSSM*SVLFGS Trigger: AGAGCCAAACAGAACAGACAACATGGAGGACGTGAT...TATGTGTGGAATGTCACTGGCAACAGATTGCTCTACCGAGTGGAAGGGGTAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS CCA 90 bp | GGTAGTACCGGAGACCTTGCGCATTCACTGCTGCTACTGTTCCATTaGGAAACAACCGTGGCCAGGAGATTGAGAACTGATAAAAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GSTGDLAHSLLLLFH*ETTVARRLRTDKKK Trigger: TTTCTTTTTATCAGTTCTCAATCTCCTGGCCACGGTTGTTTCCCAATGGAACAGTAGCAGCAGTGAATGCGCAAGGTCTCCGGTACTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS-3UTR CAA 90 bp | AACCACACTTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACTGTTGTCTGTTCTGTTaGGCTCTATCCAATGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: NHTSEASIVFTLVTAVSHCCLFC*ALSNGT Trigger: GGTCCCATTGGATAGAGCCAAACAGAACAGACAACA...GTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS GCA 90 bp | CTGGAAGCAGTATGTGGCATAGTCGTTGAAGAGATCTATCATAGTTaGATTTTTCCAGCCCCCATATTCTTCCTGGAGCGTCAGAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LEAVCGIVVEEIYHS*IFPAPIFFLERQRQ Trigger: TTGCCTCTGACGCTCCAGGAAGAATATGGGGGCTGGAAAAATGCAACTATGATAGATCTCTTCAACGACTATGCCACATACTGCTTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS-3UTR CAA 90 bp | GGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACCACTTTGCAGTGCCCTGTaGGACATTGTTTTCCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GIDCLHLGYSCLSHRKLPLCSAL*DIVFLE Trigger: CTCTAGGAAAACAATGTCCAACAGGGCACTGCAAAG...TGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CAA 90 bp | CCTTACCCCTTCCACTCGGTAGAGCAATCTGTTGCCAGTGACATTCCACACATAACCGTGGCCAGGAGATaGAGAACTGATAAAAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PYPFHSVEQSVASDIPHITVARR*RTDKKK Trigger: TTTCTTTTTATCAGTTCTCAATCTCCTGGCCACGGT...TATGTGTGGAATGTCACTGGCAACAGATTGCTCTACCGAGTGGAAGGGGTAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR CAA 90 bp | TCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTATCACGTCCTCCATGTaGTCTGTTCTGTTTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SEASIVFTLVTAVSHIVSITSSM*SVLFGS Trigger: AGAGCCAAACAGAACAGACAACATGGAGGACGTGAT...ACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CCA 90 bp | AAGAGATCTATCATAGTTGCATTTTTCCAGCCCCCATATTCTTCCTaGAGCGTCAGAGGCAAATCCCAATGGTACAAGGTAACAATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KRSIIVAFFQPPYSS*SVRGKSQWYKVTMG Trigger: GCCCATTGTTACCTTGTACCATTGGGATTTGCCTCTGACGCTCCAGGAAGAATATGGGGGCTGGAAAAATGCAACTATGATAGATCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTCCAGAGCAAACTGGTAGTGGGTGACTTTCATTTTTGCCAACATTTCAACCTTTGCAGTGCCCTGTaGGACATTGTTTTCCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PVQSKLVVGDFHFCQHFNLCSAL*DIVFLE Trigger: CTCTAGGAAAACAATGTCCAACAGGGCACTGCAAAG...GTTGAAATGTTGGCAAAAATGAAAGTCACCCACTACCAGTTTGCTCTGGACTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205084.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCACATCGTAAGTTACCAGTACATGGAGCCGGAGTGAATCTTGAAACTATGTTGGTGTTCAGCTGCTaGTGTATCACGAACCTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: LSHRKLPVHGAGVNLETMLVFSC*CITNLV Trigger: TACGAGGTTCGTGATACACAAGCAGCTGAACACCAA...CATAGTTTCAAGATTCACTCCGGCTCCATGTACTGGTAACTTACGATGTGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS TCA 90 bp | TCATGTAGATGGCCGTGGTGTCCTCTGTCTTTATATAGCTATCTGTaGACCAGCCGTTCTCCGAAATCAAGATTTGAGGGTCATCGTATT | + |
|
Preference number: 5 (lower is better) Translates to: SCRWPWCPLSLYSYL*TSRSPKSRFEGHRI Trigger: AATACGATGACCCTCAAATCTTGATTTCGGAGAACGGCTGGTTCACAGATAGCTATATAAAGACAGAGGACACCACGGCCATCTACATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CAA 90 bp | GGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTACCAACCGTGGCCAGGAGATaGAGAACTGATAAAAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GIDCLHLGYSCLSHRKLPTVARR*RTDKKK Trigger: TTTCTTTTTATCAGTTCTCAATCTCCTGGCCACGGT...TGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CAA 90 bp | TATTTACAGAAGAATGCTAGAGAAAAAGGATGTGAAGTCGTGATTCACACTTCCGCTGCTACTGTTCCATaGGGAAACAACCGTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YLQKNAREKGCEVVIHTSAATVP*GNNRGQ Trigger: CTGGCCACGGTTGTTTCCCAATGGAACAGTAGCAGC...GGAAGTGTGAATCACGACTTCACATCCTTTTTCTCTAGCATTCTTCTGTAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CAA 90 bp | AGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGTTAACTTGTCTGTTAACTTaGGACAGATTGCCAGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RGIDCLHLGYSCLSHRKLTCLLT*DRLPVG Trigger: TCCCACTGGCAATCTGTCCAAAGTTAACAGACAAGT...TAACTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CAA 90 bp | TTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCTGTCTCTCACATCGTAAGATTGTAATCCAATATTaGACACGGTCTCCAAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FRGIDCLHLGYSCLSHRKIVIQY*TRSPKV Trigger: GACCTTTGGAGACCGTGTCAAATATTGGATTACAAT...CTTACGATGTGAGAGACAGCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS-3UTR CAA 90 bp | GAATTATTTGAACCACACTTCAGAGGCATCGATTGTCTTCACCTTGGTTACAGCCCTTTGATTTTGACCTaGTCAATGAGATATGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELFEPHFRGIDCLHLGYSPLILT*SMRYAF Trigger: GAAAGCATATCTCATTGACAAGGTCAAAATCAAAGG...GCTGTAACCAAGGTGAAGACAATCGATGCCTCTGAAGTGTGGTTCAAATAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS GCA 72 bp | GCCAGGCGGCTGGGCGAGCTTAGGCGGGTGATGTCCTaGAGGAACTGGACGTCCCTGTCTGCAACTGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ARRLGELRRVMS*RNWTSLSATER Trigger: CCGCTCAGTTGCAGACAGGGACGTCCAGTTCCTGCAGGACATCACCCGCCTAAGCTCGCCCAGCCGCCTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS TCA 72 bp | GTGTTACAGCCAGGCGGCTGGGCGAGCTTAGGCGGGTaGTGTCCTGCAGGAACTGGACGTCCCTGTCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VLQPGGWASLGG*CPAGTGRPCLQ Trigger: TTGCAGACAGGGACGTCCAGTTCCTGCAGGACATCACCCGCCTAAGCTCGCCCAGCCGCCTGGCTGTAACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS TCA 72 bp | CTCAAACTGGAGGAAGCGCTCGGCTGCCTTCCAGTGTaGATCCACAAAGGGGTTGGCAGGTTCTGCCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LKLEEALGCLPV*IHKGVGRFCPV Trigger: GACTGGGCAGAACCTGCCAACCCCTTTGTGGATTCACACTGGAAGGCAGCCGAGCGCTTCCTCCAGTTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CCA 72 bp | GCTCGGCTGCCTTCCAGTGTGAATCCACAAAGGGGTTaGCAGGTTCTGCCCAGTCGCAATGTAAGGACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ARLPSSVNPQRG*QVLPSRNVRTA Trigger: CGCTGTCCTTACATTGCGACTGGGCAGAACCTGCCAACCCCTTTGTGGATTCACACTGGAAGGCAGCCGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CAA 72 bp | CGCTCGGCTGCCTTCCAGTGTGAATCCACAAAGGGGTaGGCAGGTTCTGCCCAGTCGCAATGTAAGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSAAFQCESTKG*AGSAQSQCKDS Trigger: GCTGTCCTTACATTGCGACTGGGCAGAACCTGCCAACCCCTTTGTGGATTCACACTGGAAGGCAGCCGAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS GCA 72 bp | TGCACGGTAGTACCGGAGACCTTGCGCATTCACTGCTaGTACTGTTCCATTGGGAAACAACCGTGGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: CTVVPETLRIHC*YCSIGKQPWPG Trigger: TCCTGGCCACGGTTGTTTCCCAATGGAACAGTAGCAGCAGTGAATGCGCAAGGTCTCCGGTACTACCGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS CCA 72 bp | TTGAAGAGCGGATCTGCAAACCAGGCGATCTCAAACTaGAGGAAGCGCTCGGCTGCCTTCCAGTGTGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: LKSGSANQAISN*RKRSAAFQCES Trigger: GGATTCACACTGGAAGGCAGCCGAGCGCTTCCTCCAGTTTGAGATCGCCTGGTTTGCAGATCCGCTCTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CAA 90 bp | GTGATGTCCTGCAGGAACTGGACGTCCCTGTCTGCAACTGAGCGGTaGGTGTTCAGCTGCTTGTGTATCACGAACCTCGTAGTGAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VMSCRNWTSLSATER*VFSCLCITNLVVKW Trigger: CCACTTCACTACGAGGTTCGTGATACACAAGCAGCTGAACACCAACCGCTCAGTTGCAGACAGGGACGTCCAGTTCCTGCAGGACATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS TCA 72 bp | CTGTTCTGTTTGGCTCTATCCAATGGGACCCCAAGGTaGTGGAGAGCCAACCCTTCTGATGAGGGCGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LFCLALSNGTPR*WRANPSDEGGS Trigger: ACTTCCGCCCTCATCAGAAGGGTTGGCTCTCCATCACCTTGGGGTCCCATTGGATAGAGCCAAACAGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS TCA 72 bp | GATGTCCTGCAGGAACTGGACGTCCCTGTCTGCAACTaGGCGGTTGGTGTTCAGCTGCTTGTGTATCACGAA | + |
|
Preference number: 6 (lower is better) Translates to: DVLQELDVPVCN*AVGVQLLVYHE Trigger: TTCGTGATACACAAGCAGCTGAACACCAACCGCTCAGTTGCAGACAGGGACGTCCAGTTCCTGCAGGACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS GCA 72 bp | AAGTGCACGGTAGTACCGGAGACCTTGCGCATTCACTaGTGCTACTGTTCCATTGGGAAACAACCGTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: KCTVVPETLRIH*CYCSIGKQPWP Trigger: TGGCCACGGTTGTTTCCCAATGGAACAGTAGCAGCAGTGAATGCGCAAGGTCTCCGGTACTACCGTGCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS GCA 72 bp | AACCGATGGATAGTCGCCAGTCTTGAAGAGCGGATCTaGAAACCAGGCGATCTCAAACTGGAGGAAGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: NRWIVASLEERI*KPGDLKLEEAL Trigger: GAGCGCTTCCTCCAGTTTGAGATCGCCTGGTTTGCAGATCCGCTCTTCAAGACTGGCGACTATCCATCGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CAA 72 bp | TGCAGGAACTGGACGTCCCTGTCTGCAACTGAGCGGTaGGTGTTCAGCTGCTTGTGTATCACGAACCTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: CRNWTSLSATER*VFSCLCITNLV Trigger: TACGAGGTTCGTGATACACAAGCAGCTGAACACCAACCGCTCAGTTGCAGACAGGGACGTCCAGTTCCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS GCA 72 bp | CGCAGCAGAACAAACGCAGACAGCACGGCAGATCTTTaGAGTGCCCTGTTGGACATTGTTTTCCTAGAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: RSRTNADSTADL*SALLDIVFLER Trigger: ACGCTCTAGGAAAACAATGTCCAACAGGGCACTGCAAAGATCTGCCGTGCTGTCTGCGTTTGTTCTGCTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS GCA 72 bp | CTTGTGTATCACGAACCTCGTAGTGAAGTGGTTCAGTaGGTAGAAGTCGACGGTACCCTTCACCAGCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LVYHEPRSEVVQ*VEVDGTLHQPA Trigger: AGCAGGCTGGTGAAGGGTACCGTCGACTTCTACGCACTGAACCACTTCACTACGAGGTTCGTGATACACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS GCA 72 bp | ACGTCCCTGTCTGCAACTGAGCGGTTGGTGTTCAGCTaGTTGTGTATCACGAACCTCGTAGTGAAGTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSLSATERLVFS*LCITNLVVKWF Trigger: GAACCACTTCACTACGAGGTTCGTGATACACAAGCAGCTGAACACCAACCGCTCAGTTGCAGACAGGGACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CCA 72 bp | TTGGCGAACCATCCAAGCACAGAGGACATGGAGTGCTaGCAGTTGATCACGTCCTCCATGTTGTCTGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LANHPSTEDMEC*QLITSSMLSVL Trigger: CAGAACAGACAACATGGAGGACGTGATCAACTGCCAGCACTCCATGTCCTCTGTGCTTGGATGGTTCGCCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS CAA 72 bp | TCGCAGCAGAACAAACGCAGACAGCACGGCAGATCTTaGCAGTGCCCTGTTGGACATTGTTTTCCTAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SQQNKRRQHGRS*QCPVGHCFPRA Trigger: CGCTCTAGGAAAACAATGTCCAACAGGGCACTGCAAAGATCTGCCGTGCTGTCTGCGTTTGTTCTGCTGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS CAA 72 bp | GACATGGAGTGCTGGCAGTTGATCACGTCCTCCATGTaGTCTGTTCTGTTTGGCTCTATCCAATGGGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: DMECWQLITSSM*SVLFGSIQWDP Trigger: GGGGTCCCATTGGATAGAGCCAAACAGAACAGACAACATGGAGGACGTGATCAACTGCCAGCACTCCATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS CAA 72 bp | CCCATTTTCACCACGGTGTTTGAGGGCCTGAAGTTGTaGGGCCCGAAGGAAAAGGCAAAGAAATCAGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PIFTTVFEGLKL*GPKEKAKKSAV Trigger: CACGGCTGATTTCTTTGCCTTTTCCTTCGGGCCCAACAACTTCAGGCCCTCAAACACCGTGGTGAAAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CAA 90 bp | GGGTTGGCGAACCATCCAAGCACAGAGGACATGGAGTGCTGGCAGTaGATCACGTCCTCCATGTTGTCTGTTCTGTTTGGCTCTATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GLANHPSTEDMECWQ*ITSSMLSVLFGSIQ Trigger: TTGGATAGAGCCAAACAGAACAGACAACATGGAGGACGTGATCAACTGCCAGCACTCCATGTCCTCTGTGCTTGGATGGTTCGCCAACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS CAA 90 bp | GGTAACAGCTCGCAGCAGAACAAACGCAGACAGCACGGCAGATCTTaGCAGTGCCCTGTTGGACATTGTTTTCCTAGAGCGTGTGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GNSSQQNKRRQHGRS*QCPVGHCFPRACVS Trigger: AGAAACACACGCTCTAGGAAAACAATGTCCAACAGGGCACTGCAAAGATCTGCCGTGCTGTCTGCGTTTGTTCTGCTGCGAGCTGTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS TCA 72 bp | GAAAGATGTAACTGTCAGTGGATCTGTCTGTGCCGTTaGCACCTCTCAGGTGTGAGTAGACGTACCGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: ERCNCQWICLCR*HLSGVSRRTDP Trigger: GGGATCGGTACGTCTACTCACACCTGAGAGGTGTCAACGGCACAGACAGATCCACTGACAGTTACATCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS TCA 72 bp | CATCCTCTAGAGCCAGGTCATCGATGCCATTGGCTGTaGTGTAGATATCCCTGTCTCTGTAGTTCCTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: HPLEPGHRCHWL*CRYPCLCSSSG Trigger: TCCGGAGGAACTACAGAGACAGGGATATCTACATCACAGCCAATGGCATCGATGACCTGGCTCTAGAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CCA 72 bp | GCAGTTGATCACGTCCTCCATGTTGTCTGTTCTGTTTaGCTCTATCCAATGGGACCCCAAGGTGATGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AVDHVLHVVCSV*LYPMGPQGDGE Trigger: CTCTCCATCACCTTGGGGTCCCATTGGATAGAGCCAAACAGAACAGACAACATGGAGGACGTGATCAACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS CAA 72 bp | AACCATCCAAGCACAGAGGACATGGAGTGCTGGCAGTaGATCACGTCCTCCATGTTGTCTGTTCTGTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: NHPSTEDMECWQ*ITSSMLSVLFG Trigger: GCCAAACAGAACAGACAACATGGAGGACGTGATCAACTGCCAGCACTCCATGTCCTCTGTGCTTGGATGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS CAA 72 bp | TGTCCCATTTTCACCACGGTGTTTGAGGGCCTGAAGTaGTTGGGCCCGAAGGAAAAGGCAAAGAAATCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CPIFTTVFEGLK*LGPKEKAKKSA Trigger: GGCTGATTTCTTTGCCTTTTCCTTCGGGCCCAACAACTTCAGGCCCTCAAACACCGTGGTGAAAATGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CAA 72 bp | TCCCTGTCTGCAACTGAGCGGTTGGTGTTCAGCTGCTaGTGTATCACGAACCTCGTAGTGAAGTGGTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SLSATERLVFSC*CITNLVVKWFS Trigger: ACTGAACCACTTCACTACGAGGTTCGTGATACACAAGCAGCTGAACACCAACCGCTCAGTTGCAGACAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS GCA 72 bp | CAGAACAAACGCAGACAGCACGGCAGATCTTTGCAGTaGCCTGTTGGACATTGTTTTCCTAGAGCGTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: QNKRRQHGRSLQ*PVGHCFPRACV Trigger: AACACACGCTCTAGGAAAACAATGTCCAACAGGGCACTGCAAAGATCTGCCGTGCTGTCTGCGTTTGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS CAA 90 bp | AGCAGAACAAACGCAGACAGCACGGCAGATCTTTGCAGTGCCCTGTaGGACATTGTTTTCCTAGAGCGTGTGTTTCTTTCATCAGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRTNADSTADLCSAL*DIVFLERVFLSSEL Trigger: CAGCTCTGATGAAAGAAACACACGCTCTAGGAAAACAATGTCCAACAGGGCACTGCAAAGATCTGCCGTGCTGTCTGCGTTTGTTCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS CCA 72 bp | CTGGTTCTTGGAGGCGATGTATTCCTTCATAACCGATaGATAGTCGCCAGTCTTGAAGAGCGGATCTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LVLGGDVFLHNR*IVASLEERICK Trigger: TTTGCAGATCCGCTCTTCAAGACTGGCGACTATCCATCGGTTATGAAGGAATACATCGCCTCCAAGAACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CAA 72 bp | AACGCAGACAGCACGGCAGATCTTTGCAGTGCCCTGTaGGACATTGTTTTCCTAGAGCGTGTGTTTCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: NADSTADLCSAL*DIVFLERVFLS Trigger: TGAAAGAAACACACGCTCTAGGAAAACAATGTCCAACAGGGCACTGCAAAGATCTGCCGTGCTGTCTGCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031096.11 ENSMUST00000205084.2 |
||
| CDS TCA 72 bp | TGGCCGTGGTGTCCTCTGTCTTTATATAGCTATCTGTaGACCAGCCGTTCTCCGAAATCAAGATTTGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: WPWCPLSLYSYL*TSRSPKSRFEG Trigger: ACCCTCAAATCTTGATTTCGGAGAACGGCTGGTTCACAGATAGCTATATAAAGACAGAGGACACCACGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CAA 90 bp | GGGTCATCGTATTCCAGTTTAATCCAGTTCAGCACCTGCCTTAAGTaGAGTGATACATTTTGTCCCATTTTCACCACGGTGTTTGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSSYSSLIQFSTCLK*SDTFCPIFTTVFEG Trigger: GCCCTCAAACACCGTGGTGAAAATGGGACAAAATGTATCACTCAACTTAAGGCAGGTGCTGAACTGGATTAAACTGGAATACGATGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS TCA 72 bp | CTATCTGTGAACCAGCCGTTCTCCGAAATCAAGATTTaGGGGTCATCGTATTCCAGTTTAATCCAGTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSVNQPFSEIKI*GSSYSSLIQFS Trigger: GCTGAACTGGATTAAACTGGAATACGATGACCCTCAAATCTTGATTTCGGAGAACGGCTGGTTCACAGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CAA 72 bp | GCTATCTGTGAACCAGCCGTTCTCCGAAATCAAGATTaGAGGGTCATCGTATTCCAGTTTAATCCAGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: AICEPAVLRNQD*RVIVFQFNPVQ Trigger: CTGAACTGGATTAAACTGGAATACGATGACCCTCAAATCTTGATTTCGGAGAACGGCTGGTTCACAGATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS CAA 90 bp | CTTTATATAGCTATCTGTGAACCAGCCGTTCTCCGAAATCAAGATTaGAGGGTCATCGTATTCCAGTTTAATCCAGTTCAGCACCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LYIAICEPAVLRNQD*RVIVFQFNPVQHLP Trigger: AGGCAGGTGCTGAACTGGATTAAACTGGAATACGATGACCCTCAAATCTTGATTTCGGAGAACGGCTGGTTCACAGATAGCTATATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||
| CDS GCA 72 bp | GGGTCATCGTATTCCAGTTTAATCCAGTTCAGCACCTaGCTTAAGTTGAGTGATACATTTTGTCCCATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GSSYSSLIQFST*LKLSDTFCPIF Trigger: GAAAATGGGACAAAATGTATCACTCAACTTAAGGCAGGTGCTGAACTGGATTAAACTGGAATACGATGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031096.11 |
||