Pregenerated sensors for KL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058488Ensembl transcript IDs: ENSMUST00000078856.8
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAATGTGTGGAATGCGGCTCACAACACAGAGAGGTGCAAACGGCTaGCGGCGTGTACATCTTGATCCCAAAGCGAATGGCCAGGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: EMCGMRLTTQRGANG*RRVHLDPKANGQAD Trigger: GTCTGCCTGGCCATTCGCTTTGGGATCAAGATGTACACGCCGTCAGCCGTTTGCACCTCTCTGTGTTGTGAGCCGCATTCCACACATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR TCA 90 bp | AGATCTCGGCGGCCGCAAGGACAGGTTCCCAGTGTGCTCACACTGTaGTTGCTGCCGGATCGACTAAGAAAGTTGAACATCATGGCATCC | + |
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Preference number: 1 (lower is better) Translates to: RSRRPQGQVPSVLTL*LLPDRLRKLNIMAS Trigger: GGATGCCATGATGTTCAACTTTCTTAGTCGATCCGGCAGCAATCACAGTGTGAGCACACTGGGAACCTGTCCTTGCGGCCGCCGAGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR CCA 90 bp | TTCGGTAATGAGAAACAAATAAAGAATCTTTGGGCTGGAGCAAGCTaGGTGGAGCGAGGTGGGGCAGAGCAAGAGGGAAAGGGGAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: FGNEKQIKNLWAGAS*VERGGAEQEGKGKG Trigger: CCCCTTCCCCTTTCCCTCTTGCTCTGCCCCACCTCGCTCCACCCAGCTTGCTCCAGCCCAAAGATTCTTTATTTGTTTCTCATTACCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR CCA 90 bp | TGGTGGCTCACAACCTTCGGTAATGAGAAACAAATAAAGAATCTTTaGGCTGGAGCAAGCTGGGTGGAGCGAGGTGGGGCAGAGCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: WWLTTFGNEKQIKNL*AGASWVERGGAEQE Trigger: CTCTTGCTCTGCCCCACCTCGCTCCACCCAGCTTGCTCCAGCCCAAAGATTCTTTATTTGTTTCTCATTACCGAAGGTTGTGAGCCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR GCA 90 bp | ACCACCCATGACAAAAAGGGTTTTCTAGAATCGAAATGTGTGGAATaGGGCTCACAACACAGAGAGGTGCAAACGGCTGACGGCGTGTAC | + |
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Preference number: 1 (lower is better) Translates to: TTHDKKGFLESKCVE*GSQHREVQTADGVY Trigger: GTACACGCCGTCAGCCGTTTGCACCTCTCTGTGTTGTGAGCCGCATTCCACACATTTCGATTCTAGAAAACCCTTTTTGTCATGGGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR TCA 90 bp | ATCCAAGCACTGACAGCATATTCTGAAGAGGCATTCTTTACAGTTTaGCTGAGAGCTCCTCCTTCTTCCTGTGGGAAAGGTCATTGCATT | + |
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Preference number: 1 (lower is better) Translates to: IQALTAYSEEAFFTV*LRAPPSSCGKGHCI Trigger: AATGCAATGACCTTTCCCACAGGAAGAAGGAGGAGCTCTCAGTCAAACTGTAAAGAATGCCTCTTCAGAATATGCTGTCAGTGCTTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR CCA 90 bp | TGGATAAACAAGTCCCTAAAGTTGTTCTTTAAACTTCTGTCTGCTTaGCACTGTTATCCCTACCGTATTCTATGCCTTCCATTCCGGGGC | + |
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Preference number: 1 (lower is better) Translates to: WINKSLKLFFKLLSA*HCYPYRILCLPFRG Trigger: GCCCCGGAATGGAAGGCATAGAATACGGTAGGGATAACAGTGCCAAGCAGACAGAAGTTTAAAGAACAACTTTAGGGACTTGTTTATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR CCA 90 bp | CCTCCTTCTTCCTGTGGGAAAGGTCATTGCATTCATTCCAAGGTCTaGTCAAAGATAAAAGGATGTTCAATCAAATCACTCAGTTTCCGC | + |
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Preference number: 1 (lower is better) Translates to: PPSSCGKGHCIHSKV*SKIKGCSIKSLSFR Trigger: GCGGAAACTGAGTGATTTGATTGAACATCCTTTTATCTTTGACCAGACCTTGGAATGAATGCAATGACCTTTCCCACAGGAAGAAGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR CCA 90 bp | AGAGGCATTCTTTACAGTTTGACTGAGAGCTCCTCCTTCTTCCTGTaGGAAAGGTCATTGCATTCATTCCAAGGTCTGGTCAAAGATAAA | + |
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Preference number: 1 (lower is better) Translates to: RGILYSLTESSSFFL*ERSLHSFQGLVKDK Trigger: TTTATCTTTGACCAGACCTTGGAATGAATGCAATGACCTTTCCCACAGGAAGAAGGAGGAGCTCTCAGTCAAACTGTAAAGAATGCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGTAGATCTCGGCGGCCGCAAGGACAGGTTCCCAGTGTGCTCACACTGTGATAAACTTCTGTCTGCTTaGCACTGTTATCCCTACCGT | + |
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Preference number: 2 (lower is better) Translates to: TVDLGGRKDRFPVCSHCDKLLSA*HCYPYR Trigger: ACGGTAGGGATAACAGTGCCAAGCAGACAGAAGTTT...ATCACAGTGTGAGCACACTGGGAACCTGTCCTTGCGGCCGCCGAGATCTACCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR-3UTR TCA 90 bp | ACGGTAGATCTCGGCGGCCGCAAGGACAGGTTCCCAGTGTGCTCACACTGTGATAACCTCTACCACCCATaGCAAAAAGGGTTTTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: TVDLGGRKDRFPVCSHCDNLYHP*QKGFSR Trigger: TCTAGAAAACCCTTTTTGTCATGGGTGGTAGAGGTT...ATCACAGTGTGAGCACACTGGGAACCTGTCCTTGCGGCCGCCGAGATCTACCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR-3UTR CCA 90 bp | TCCGGAGGTCATGAGTTCAAATCCCAGAAACCACATGGTGGCTCACAACCTTCGTGGACTCAGGGCTCTTaGCCACCTTTACTGGATATT | + |
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Preference number: 2 (lower is better) Translates to: SGGHEFKSQKPHGGSQPSWTQGS*PPLLDI Trigger: AATATCCAGTAAAGGTGGCCAAGAGCCCTGAGTCCA...CGAAGGTTGTGAGCCACCATGTGGTTTCTGGGATTTGAACTCATGACCTCCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR-3UTR CCA 90 bp | GTAGCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATAAAGAATCTTTGGGCTaGAGCAAGCTGGGTGGAGCG | + |
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Preference number: 2 (lower is better) Translates to: VAMPAMTDLSCLIWYQGYKESLG*SKLGGA Trigger: CGCTCCACCCAGCTTGCTCCAGCCCAAAGATTCTTT...ATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGTAGATCTCGGCGGCCGCAAGGACAGGTTCCCAGTGTGCTCACACTGTGATATTCATTCCAAGGTCTaGTCAAAGATAAAAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: TVDLGGRKDRFPVCSHCDIHSKV*SKIKGC Trigger: ACATCCTTTTATCTTTGACCAGACCTTGGAATGAAT...ATCACAGTGTGAGCACACTGGGAACCTGTCCTTGCGGCCGCCGAGATCTACCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATATGGCATCCAAGCACTaGCAGCATATTCTGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VAMPAMTDLSCLIWYQGYMASKH*QHILKR Trigger: CCTCTTCAGAATATGCTGTCAGTGCTTGGATGCCAT...ATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR-3UTR TCA 90 bp | TGTATAAAGAATACCACAGCAAAAGCTGATCATTCACCAGGAAAACCATACCACATGAGCTATGTGCTGTaGCCCTGTGGCAGCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: CIKNTTAKADHSPGKPYHMSYVL*PCGSKG Trigger: ACCCTTGCTGCCACAGGGTCACAGCACATAGCTCAT...GTGGTATGGTTTTCCTGGTGAATGATCAGCTTTTGCTGTGGTATTCTTTATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR-3UTR GCA 90 bp | TGGATAAACAAGTCCCTAAAGTTGTTCTTTAAACTTCTGTCTGCTTGGCACTGTCACAACACAGAGAGGTaGAAACGGCTGACGGCGTGT | + |
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Preference number: 2 (lower is better) Translates to: WINKSLKLFFKLLSAWHCHNTER*KRLTAC Trigger: ACACGCCGTCAGCCGTTTGCACCTCTCTGTGTTGTG...ACAGTGCCAAGCAGACAGAAGTTTAAAGAACAACTTTAGGGACTTGTTTATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR-3UTR CCA 90 bp | GCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATCAACAAATAAAGAATCTTTaGGCTGGAGCAAGCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: AMPAMTDLSCLIWYQGYQQIKNL*AGASWV Trigger: CACCCAGCTTGCTCCAGCCCAAAGATTCTTTATTTG...TTGATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTCTGCTTGGCACTGTTATCCCTACCGTATTCTATGCCTTCCATTCCGGGGAGATACCATTCACCCTaGAATATTTTATTCTCACCA | + |
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Preference number: 2 (lower is better) Translates to: SVCLALLSLPYSMPSIPGRYHSP*NILFSP Trigger: TGGTGAGAATAAAATATTGCAGGGTGAATGGTATCT...CCCCGGAATGGAAGGCATAGAATACGGTAGGGATAACAGTGCCAAGCAGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR-3UTR GCA 90 bp | TGTATAAAGAATACCACAGCAAAAGCTGATCATTCACCAGGAAAACCATACCACGACAGGTTCCCAGTGTaGTCACACTGTGATTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: CIKNTTAKADHSPGKPYHDRFPV*SHCDCC Trigger: GCAGCAATCACAGTGTGAGCACACTGGGAACCTGTC...GTGGTATGGTTTTCCTGGTGAATGATCAGCTTTTGCTGTGGTATTCTTTATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR TCA 72 bp | GGAATGCGGCTCACAACACAGAGAGGTGCAAACGGCTaGCGGCGTGTACATCTTGATCCCAAAGCGAATGGC | + |
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Preference number: 3 (lower is better) Translates to: GMRLTTQRGANG*RRVHLDPKANG Trigger: GCCATTCGCTTTGGGATCAAGATGTACACGCCGTCAGCCGTTTGCACCTCTCTGTGTTGTGAGCCGCATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR TCA 72 bp | CGGCCGCAAGGACAGGTTCCCAGTGTGCTCACACTGTaGTTGCTGCCGGATCGACTAAGAAAGTTGAACATC | + |
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Preference number: 3 (lower is better) Translates to: RPQGQVPSVLTL*LLPDRLRKLNI Trigger: GATGTTCAACTTTCTTAGTCGATCCGGCAGCAATCACAGTGTGAGCACACTGGGAACCTGTCCTTGCGGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR CCA 72 bp | GAGAAACAAATAAAGAATCTTTGGGCTGGAGCAAGCTaGGTGGAGCGAGGTGGGGCAGAGCAAGAGGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: EKQIKNLWAGAS*VERGGAEQEGK Trigger: CTTTCCCTCTTGCTCTGCCCCACCTCGCTCCACCCAGCTTGCTCCAGCCCAAAGATTCTTTATTTGTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR-3UTR CAA 90 bp | TCCGGAGGTCATGAGTTCAAATCCCAGAAACCACATGGTGGCTCACAACCTTCGCTGGACTCAGGGCTCTaGGCCACCTTTACTGGATAT | + |
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Preference number: 3 (lower is better) Translates to: SGGHEFKSQKPHGGSQPSLDSGL*ATFTGY Trigger: ATATCCAGTAAAGGTGGCCAAGAGCCCTGAGTCCAG...CGAAGGTTGTGAGCCACCATGTGGTTTCTGGGATTTGAACTCATGACCTCCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR TCA 72 bp | AAGATGAAGAATAACAGGGTGATGAGCTATGTGCTGTaGCCCTGTGGCAGCAAGGGTAGCCATGCCTGCTAT | + |
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Preference number: 3 (lower is better) Translates to: KMKNNRVMSYVL*PCGSKGSHACY Trigger: ATAGCAGGCATGGCTACCCTTGCTGCCACAGGGTCACAGCACATAGCTCATCACCCTGTTATTCTTCATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR CCA 72 bp | ACAACCTTCGGTAATGAGAAACAAATAAAGAATCTTTaGGCTGGAGCAAGCTGGGTGGAGCGAGGTGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: TTFGNEKQIKNL*AGASWVERGGA Trigger: TGCCCCACCTCGCTCCACCCAGCTTGCTCCAGCCCAAAGATTCTTTATTTGTTTCTCATTACCGAAGGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR GCA 72 bp | GACAAAAAGGGTTTTCTAGAATCGAAATGTGTGGAATaGGGCTCACAACACAGAGAGGTGCAAACGGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: DKKGFLESKCVE*GSQHREVQTAD Trigger: GTCAGCCGTTTGCACCTCTCTGTGTTGTGAGCCGCATTCCACACATTTCGATTCTAGAAAACCCTTTTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR CCA 72 bp | GTGCTTCTTAATGGGCTGCTCTGGACTCAGGGCTCTTaGCCACCTTTACTGGATATTTTTCTACTTCACCTT | + |
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Preference number: 3 (lower is better) Translates to: VLLNGLLWTQGS*PPLLDIFLLHL Trigger: AAGGTGAAGTAGAAAAATATCCAGTAAAGGTGGCCAAGAGCCCTGAGTCCAGAGCAGCCCATTAAGAAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR-3UTR CAA 90 bp | GTAGCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATGCTCTGAAAGGAAAGTaGGTAAGAGAAAGCCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: VAMPAMTDLSCLIWYQGYALKGK*VRESPQ Trigger: TTGAGGGCTTTCTCTTACCAACTTTCCTTTCAGAGC...ATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR TCA 72 bp | CTGACAGCATATTCTGAAGAGGCATTCTTTACAGTTTaGCTGAGAGCTCCTCCTTCTTCCTGTGGGAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: LTAYSEEAFFTV*LRAPPSSCGKG Trigger: ACCTTTCCCACAGGAAGAAGGAGGAGCTCTCAGTCAAACTGTAAAGAATGCCTCTTCAGAATATGCTGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR CCA 72 bp | AAGTCCCTAAAGTTGTTCTTTAAACTTCTGTCTGCTTaGCACTGTTATCCCTACCGTATTCTATGCCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: KSLKLFFKLLSA*HCYPYRILCLP Trigger: TGGAAGGCATAGAATACGGTAGGGATAACAGTGCCAAGCAGACAGAAGTTTAAAGAACAACTTTAGGGACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR TCA 72 bp | CGACTAAGAAAGTTGAACATCATGGCATCCAAGCACTaGCAGCATATTCTGAAGAGGCATTCTTTACAGTTT | + |
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Preference number: 3 (lower is better) Translates to: RLRKLNIMASKH*QHILKRHSLQF Trigger: AAACTGTAAAGAATGCCTCTTCAGAATATGCTGTCAGTGCTTGGATGCCATGATGTTCAACTTTCTTAGTCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | ACGGTAGATCTCGGCGGCCGCAAGGACAGGTTCCCAGTGTGCTCACACTGTGATGGGCCAGGCGCCCGGTaGCATACCCGTGCCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TVDLGGRKDRFPVCSHCDGPGAR*HTRARP Trigger: TGGCCTGGCACGGGTATGCCACCGGGCGCCTGGCCC...ATCACAGTGTGAGCACACTGGGAACCTGTCCTTGCGGCCGCCGAGATCTACCGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR TCA 90 bp | ACGGTAGATCTCGGCGGCCGCAAGGACAGGTTCCCAGTGTGCTCACACTGTGATAGAAGCGGTAGTGGGTaGCCCCCAGTTCGCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: TVDLGGRKDRFPVCSHCDRSGSG*PPVRAA Trigger: GGCTGCGCGAACTGGGGGTCACCCACTACCGCTTCT...ATCACAGTGTGAGCACACTGGGAACCTGTCCTTGCGGCCGCCGAGATCTACCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR TCA 90 bp | TCTGTCTGCTTGGCACTGTTATCCCTACCGTATTCTATGCCTTCCATTCCGGGGCAGGTCTGCGCGCCCTaGCCCGGCTCAGCGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SVCLALLSLPYSMPSIPGQVCAP*PGSALR Trigger: CCTGAGCGCTGAGCCGGGTCAGGGCGCGCAGACCTG...CCCCGGAATGGAAGGCATAGAATACGGTAGGGATAACAGTGCCAAGCAGACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR GCA 90 bp | ACGGTAGATCTCGGCGGCCGCAAGGACAGGTTCCCAGTGTGCTCACACTGTGATTCTGATAGGCGGCGCTaGCTACCGCCCAGAGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: TVDLGGRKDRFPVCSHCDSDRRR*LPPRGN Trigger: GTTTCCTCTGGGCGGTAGGCAGCGCCGCCTATCAGA...ATCACAGTGTGAGCACACTGGGAACCTGTCCTTGCGGCCGCCGAGATCTACCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR GCA 90 bp | TCCGGAGGTCATGAGTTCAAATCCCAGAAACCACATGGTGGCTCACAACCTTCGGCCTTGGTGCGGGGCTaGTGGCTGCCACAGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SGGHEFKSQKPHGGSQPSALVRG*WLPQGH Trigger: GTGGCCCTGTGGCAGCCAGCAGCCCCGCACCAAGGC...CGAAGGTTGTGAGCCACCATGTGGTTTCTGGGATTTGAACTCATGACCTCCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR GCA 90 bp | ACGGTAGATCTCGGCGGCCGCAAGGACAGGTTCCCAGTGTGCTCACACTGTGATCCAGGCCCCATGTTTTaGAAGGGCATGTGGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TVDLGGRKDRFPVCSHCDPGPMF*KGMWQA Trigger: GGCCTGCCACATGCCCTTGCAAAACATGGGGCCTGG...ATCACAGTGTGAGCACACTGGGAACCTGTCCTTGCGGCCGCCGAGATCTACCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TCCGGAGGTCATGAGTTCAAATCCCAGAAACCACATGGTGGCTCACAACCTTCGGCAGCCCCTCGCGGTTaGGAGTGCCCGCGGTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SGGHEFKSQKPHGGSQPSAAPRG*ECPRCH Trigger: ATGGCACCGCGGGCACTCCCAACCGCGAGGGGCTGC...CGAAGGTTGTGAGCCACCATGTGGTTTCTGGGATTTGAACTCATGACCTCCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | ACGGTAGATCTCGGCGGCCGCAAGGACAGGTTCCCAGTGTGCTCACACTGTGATCCACAGGGCCACCACTaGAGTGATGTTGGCGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: TVDLGGRKDRFPVCSHCDPQGHH*SDVGVH Trigger: GTGCACGCCAACATCACTCCAGTGGTGGCCCTGTGG...ATCACAGTGTGAGCACACTGGGAACCTGTCCTTGCGGCCGCCGAGATCTACCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR GCA 90 bp | TCCGGAGGTCATGAGTTCAAATCCCAGAAACCACATGGTGGCTCACAACCTTCGTGTGGCAGGCCTTGGTaGGGGGCTGCTGGCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SGGHEFKSQKPHGGSQPSCGRPW*GAAGCH Trigger: GTGGCAGCCAGCAGCCCCGCACCAAGGCCTGCCACA...CGAAGGTTGTGAGCCACCATGTGGTTTCTGGGATTTGAACTCATGACCTCCGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TCCGGAGGTCATGAGTTCAAATCCCAGAAACCACATGGTGGCTCACAACCTTCGCGGCCAGGGCGCGATTaGCCCATCCGCCATAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SGGHEFKSQKPHGGSQPSRPGRD*PIRHRC Trigger: ACACCTATGGCGGATGGGCCAATCGCGCCCTGGCCG...CGAAGGTTGTGAGCCACCATGTGGTTTCTGGGATTTGAACTCATGACCTCCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | ACGGTAGATCTCGGCGGCCGCAAGGACAGGTTCCCAGTGTGCTCACACTGTGATGAAGCTGCCTCAGGTTaGGAGACTCCAATTGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: TVDLGGRKDRFPVCSHCDEAASG*ETPIGG Trigger: TCCGCCAATTGGAGTCTCCCAACCTGAGGCAGCTTC...ATCACAGTGTGAGCACACTGGGAACCTGTCCTTGCGGCCGCCGAGATCTACCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR GCA 90 bp | GCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATCAAGACGCGCCTTTGCCGTaGTGTCGCCAGCCGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: AMPAMTDLSCLIWYQGYQDAPLP*CRQPPS Trigger: CGAGGGCGGCTGGCGACAGCACGGCAAAGGCGCGTC...TTGATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR GCA 90 bp | GCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATCAATGGGAGTGCCCGCGGTaGCATTGGGGAGCACCCGCG | + |
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Preference number: 4 (lower is better) Translates to: AMPAMTDLSCLIWYQGYQWECPR*HWGAPA Trigger: CGCGGGTGCTCCCCAATGGCACCGCGGGCACTCCCA...TTGATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR GCA 90 bp | GCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATCAACCTCGCGGTTGGGAGTaGCCGCGGTGCCATTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: AMPAMTDLSCLIWYQGYQPRGWE*PRCHWG Trigger: TCCCCAATGGCACCGCGGGCACTCCCAACCGCGAGG...TTGATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | GCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATCAATTGGTGCGGGGCTGCTaGCTGCCACAGGGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: AMPAMTDLSCLIWYQGYQLVRGC*LPQGHH Trigger: GTGGTGGCCCTGTGGCAGCCAGCAGCCCCGCACCAA...TTGATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR TCA 90 bp | TCCGGAGGTCATGAGTTCAAATCCCAGAAACCACATGGTGGCTCACAACCTTCGCGTGCACCAGCTCGCTaGTCATGCAGCGGTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGGHEFKSQKPHGGSQPSRAPAR*SCSGRS Trigger: ACTTCTACCGCTGCATGATCAGCGAGCTGGTGCACG...CGAAGGTTGTGAGCCACCATGTGGTTTCTGGGATTTGAACTCATGACCTCCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR TCA 90 bp | ACGGTAGATCTCGGCGGCCGCAAGGACAGGTTCCCAGTGTGCTCACACTGTGATACTTCTTTGTCATTTTaGGAGAAAGGGCAGGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TVDLGGRKDRFPVCSHCDTSLSF*EKGQAG Trigger: ACCGGCCTGCCCTTTCTCTCAAAATGACAAAGAAGT...ATCACAGTGTGAGCACACTGGGAACCTGTCCTTGCGGCCGCCGAGATCTACCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR TCA 90 bp | GTAGCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATGCTCGGCATAATCCCTaGAATGGTCGGCCAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VAMPAMTDLSCLIWYQGYARHNP*NGRPGR Trigger: GCGCCCTGGCCGACCATTTCAGGGATTATGCCGAGC...ATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR GCA 90 bp | GCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATCAAAACGCCAGAGCAGTGTaGGGGTTCTCCCAGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AMPAMTDLSCLIWYQGYQNARAV*GFSQAP Trigger: TGGGGCCTGGGAGAACCCGCACACTGCTCTGGCGTT...TTGATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TGTATAAAGAATACCACAGCAAAAGCTGATCATTCACCAGGAAAACCATACCACGAGGCCAGCGGCCTCTaGGGCAGGAGCGCGCGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: CIKNTTAKADHSPGKPYHEASGL*GRSARE Trigger: TTCGCGCGCGCTCCTGCCCCAGAGGCCGCTGGCCTC...GTGGTATGGTTTTCCTGGTGAATGATCAGCTTTTGCTGTGGTATTCTTTATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATTGGCCACATCTCCAGTaGAGGACAGGGGAGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: VAMPAMTDLSCLIWYQGYWPHLQ*RTGEAT Trigger: CGTCGCCTCCCCTGTCCTCCACTGGAGATGTGGCCA...ATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TCCGGAGGTCATGAGTTCAAATCCCAGAAACCACATGGTGGCTCACAACCTTCGGCCAAAAGTAGGTTGTaGGCAACCAGGTACCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGGHEFKSQKPHGGSQPSAKSRL*ATRYPS Trigger: GCTCGGGTACCTGGTTGCCCACAACCTACTTTTGGC...CGAAGGTTGTGAGCCACCATGTGGTTTCTGGGATTTGAACTCATGACCTCCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTCTGCTTGGCACTGTTATCCCTACCGTATTCTATGCCTTCCATTCCGGGGATCCAAGACAGAAGCTaGCTCAGGTTGGGAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVCLALLSLPYSMPSIPGIQDRS*LRLGDS Trigger: GGAGTCTCCCAACCTGAGGCAGCTTCTGTCTTGGAT...CCCCGGAATGGAAGGCATAGAATACGGTAGGGATAACAGTGCCAAGCAGACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TGGATAAACAAGTCCCTAAAGTTGTTCTTTAAACTTCTGTCTGCTTGGCACTGTCCAGGTACCCGAGCCTaGAGCTGCCCCTCACGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: WINKSLKLFFKLLSAWHCPGTRA*SCPSRP Trigger: CGGGCGTGAGGGGCAGCTCCAGGCTCGGGTACCTGG...ACAGTGCCAAGCAGACAGAAGTTTAAAGAACAACTTTAGGGACTTGTTTATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTTAAACTTCTGTCTGCTTGGCACTGTTATCCCTACCGTATTCTATGCCTTGGGGCCGCCCCAGAGTaGTGGGTGAAAGTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FFKLLSAWHCYPYRILCLGAAPE*WVKVSQ Trigger: CTGGGACACTTTCACCCATCACTCTGGGGCGGCCCC...AAGGCATAGAATACGGTAGGGATAACAGTGCCAAGCAGACAGAAGTTTAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR GCA 90 bp | TGGATAAACAAGTCCCTAAAGTTGTTCTTTAAACTTCTGTCTGCTTGGCACTGTTGCGGGGCTGCTGGCTaGCACAGGGCCACCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WINKSLKLFFKLLSAWHCCGAAG*HRATTG Trigger: TCCAGTGGTGGCCCTGTGGCAGCCAGCAGCCCCGCA...ACAGTGCCAAGCAGACAGAAGTTTAAAGAACAACTTTAGGGACTTGTTTATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TCTGTCTGCTTGGCACTGTTATCCCTACCGTATTCTATGCCTTCCATTCCGGGGTGTTGTAACTATCGCTaGCCACATCTCCAGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVCLALLSLPYSMPSIPGCCNYR*PHLQWR Trigger: CCTCCACTGGAGATGTGGCCAGCGATAGTTACAACA...CCCCGGAATGGAAGGCATAGAATACGGTAGGGATAACAGTGCCAAGCAGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TGGATAAACAAGTCCCTAAAGTTGTTCTTTAAACTTCTGTCTGCTTGGCACTGTGCATGTGGCAGGCCTTaGTGCGGGGCTGCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WINKSLKLFFKLLSAWHCACGRP*CGAAGC Trigger: GCAGCCAGCAGCCCCGCACCAAGGCCTGCCACATGC...ACAGTGCCAAGCAGACAGAAGTTTAAAGAACAACTTTAGGGACTTGTTTATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TGTATAAAGAATACCACAGCAAAAGCTGATCATTCACCAGGAAAACCATACCACTCGGGGAAGGTGTCGTaGAGGAGGCCAGCGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CIKNTTAKADHSPGKPYHSGKVS*RRPAAS Trigger: AGAGGCCGCTGGCCTCCTCCACGACACCTTCCCCGA...GTGGTATGGTTTTCCTGGTGAATGATCAGCTTTTGCTGTGGTATTCTTTATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR TCA 90 bp | AAGAATCTCCAACAAGCAGGCTCTGAAAGGAAAGTTGGTAAGAGAAAGCCCTCAATCCAGTACTTGACCTaGCCACCGAAGTGGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KNLQQAGSERKVGKRKPSIQYLT*PPKWRK Trigger: CTTCCGCCACTTCGGTGGTCAGGTCAAGTACTGGAT...TGAGGGCTTTCTCTTACCAACTTTCCTTTCAGAGCCTGCTTGTTGGAGATTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | ACGGTAGATCTCGGCGGCCGCAAGGACAGGTTCCCAGTGTGCTCACACTGTGATGATAATACATATATTTaGCATCATCCCTTTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVDLGGRKDRFPVCSHCDDNTYI*HHPFWW Trigger: CCACCAAAAGGGATGATGCCAAATATATGTATTATC...ATCACAGTGTGAGCACACTGGGAACCTGTCCTTGCGGCCGCCGAGATCTACCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR GCA 90 bp | TGGATAAACAAGTCCCTAAAGTTGTTCTTTAAACTTCTGTCTGCTTGGCACTGTCCCCCAAGGCACCACTaGCACCTGACTGGGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WINKSLKLFFKLLSAWHCPPRHH*HLTGRV Trigger: AACTCTCCCAGTCAGGTGGCAGTGGTGCCTTGGGGG...ACAGTGCCAAGCAGACAGAAGTTTAAAGAACAACTTTAGGGACTTGTTTATCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | GTAGCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATCATCATCCCTTTTGGTaGTTCCCGAGACAAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VAMPAMTDLSCLIWYQGYHHPFW*FPRQTS Trigger: GCTGGTTTGTCTCGGGAACCACCAAAAGGGATGATG...ATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | GTAGCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATGTCCCTTCAAGGGGCTaGTTTTCAGGTAAAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VAMPAMTDLSCLIWYQGYVPSRG*FSGKGG Trigger: TCCTCCTTTACCTGAAAACCAGCCCCTTGAAGGGAC...ATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR CCA 90 bp | TGTATAAAGAATACCACAGCAAAAGCTGATCATTCACCAGGAAAACCATACCACTTTTGCAAGGGCATGTaGCAGGCCTTGGTGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CIKNTTAKADHSPGKPYHFCKGM*QALVRG Trigger: GCCCCGCACCAAGGCCTGCCACATGCCCTTGCAAAA...GTGGTATGGTTTTCCTGGTGAATGATCAGCTTTTGCTGTGGTATTCTTTATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR CCA 90 bp | TCCGGAGGTCATGAGTTCAAATCCCAGAAACCACATGGTGGCTCACAACCTTCGCACAGTGTATTCTTCTaGACAAAACCTTCCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGGHEFKSQKPHGGSQPSHSVFF*TKPSQC Trigger: ACACTGGGAAGGTTTTGTCCAGAAGAATACACTGTG...CGAAGGTTGTGAGCCACCATGTGGTTTCTGGGATTTGAACTCATGACCTCCGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR TCA 90 bp | GCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATCAACGACCCCATCCAGTCTaGTTGCTTTTAAGGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AMPAMTDLSCLIWYQGYQRPHPV*LLLRFP Trigger: TGGAAACCTTAAAAGCAATCAGACTGGATGGGGTCG...TTGATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR TCA 90 bp | GTAGCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATTTCGGGTCAGTAAACTaGGAGAGAGTAGTGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VAMPAMTDLSCLIWYQGYFGSVN*ERVVST Trigger: AGTGGACACTACTCTCTCTCAGTTTACTGACCCGAA...ATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR GCA 90 bp | TGGATAAACAAGTCCCTAAAGTTGTTCTTTAAACTTCTGTCTGCTTGGCACTGTGCGAGCAGCAGCAGATaGAGCAACAGCAAACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WINKSLKLFFKLLSAWHCASSSR*SNSKRS Trigger: GCTCCGTTTGCTGTTGCTGCATCTGCTGCTGCTCGC...ACAGTGCCAAGCAGACAGAAGTTTAAAGAACAACTTTAGGGACTTGTTTATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TGTATAAAGAATACCACAGCAAAAGCTGATCATTCACCAGGAAAACCATACCACTGTGGCAGGTCCCAATaGTACAGGGTAACCACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CIKNTTAKADHSPGKPYHCGRSQ*YRVTTG Trigger: GCCGGTGGTTACCCTGTACCATTGGGACCTGCCACA...GTGGTATGGTTTTCCTGGTGAATGATCAGCTTTTGCTGTGGTATTCTTTATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TCCGGAGGTCATGAGTTCAAATCCCAGAAACCACATGGTGGCTCACAACCTTCGGTTCTTCATACTCTCTaGGTAGTCGCCATCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGGHEFKSQKPHGGSQPSVLHTL*VVAINK Trigger: TTTATTGATGGCGACTACCCAGAGAGTATGAAGAAC...CGAAGGTTGTGAGCCACCATGTGGTTTCTGGGATTTGAACTCATGACCTCCGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TTCTTTAAACTTCTGTCTGCTTGGCACTGTTATCCCTACCGTATTCTATGCCTTACCGTGTGGTTCACTTaGGTCTGGTTACCCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FFKLLSAWHCYPYRILCLTVWFT*VWLPRG Trigger: GCCTCTGGGTAACCAGACCCAAGTGAACCACACGGT...AAGGCATAGAATACGGTAGGGATAACAGTGCCAAGCAGACAGAAGTTTAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | GTAGCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATAAGTGCAGAACCGTGTaGTTCACTTGGGTCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VAMPAMTDLSCLIWYQGYKCRTV*FTWVWL Trigger: TAACCAGACCCAAGTGAACCACACGGTTCTGCACTT...ATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | GCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATCAAGTCCCTCATCACACGTaGATAATCTCCGGAACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AMPAMTDLSCLIWYQGYQVPHHT*IISGTK Trigger: TTTGGTTCCGGAGATTATCCACGTGTGATGAGGGAC...TTGATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR GCA 90 bp | GCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATCAATCTATCCAGTCAGCCTaGAAGGCGATGGATATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AMPAMTDLSCLIWYQGYQSIQSA*KAMDIL Trigger: CAAAATATCCATCGCCTTGCAGGCTGACTGGATAGA...TTGATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| 3UTR CAA 72 bp | AGCAAGGGTAGCCATGCCTGCTATGACGGATTTATCTaGCCTGATCTGGTATCAGGGTTATCAATAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SKGSHACYDGFI*PDLVSGLSIRP Trigger: TGGTCTTATTGATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGCTACCCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR TCA 90 bp | AAGAATCTCCAACAAGCAGGCTCTGAAAGGAAAGTTGGTAAGAGAAAGCCCTCATCATTCTTCGAGGATTaGTCCAATGGGAGCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNLQQAGSERKVGKRKPSSFFED*SNGSLR Trigger: CCTTAAGCTCCCATTGGATCAATCCTCGAAGAATGA...TGAGGGCTTTCTCTTACCAACTTTCCTTTCAGAGCCTGCTTGTTGGAGATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | AAGAATCTCCAACAAGCAGGCTCTGAAAGGAAAGTTGGTAAGAGAAAGCCCTCAAAGGTTTTCTCTTCTTaGCTACAACCCCGTCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: KNLQQAGSERKVGKRKPSKVFSS*LQPRLL Trigger: AAGTAGACGGGGTTGTAGCCAAGAAGAGAAAACCTT...TGAGGGCTTTCTCTTACCAACTTTCCTTTCAGAGCCTGCTTGTTGGAGATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TGGATAAACAAGTCCCTAAAGTTGTTCTTTAAACTTCTGTCTGCTTGGCACTGTTGGTTCACTTGGGTCTaGTTACCCAGAGGCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: WINKSLKLFFKLLSAWHCWFTWV*LPRGKI Trigger: GATCTTGCCTCTGGGTAACCAGACCCAAGTGAACCA...ACAGTGCCAAGCAGACAGAAGTTTAAAGAACAACTTTAGGGACTTGTTTATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TGGATAAACAAGTCCCTAAAGTTGTTCTTTAAACTTCTGTCTGCTTGGCACTGTCGAGGATTGATCCAATaGGAGCTTAAGGCGATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WINKSLKLFFKLLSAWHCRGLIQ*ELKAID Trigger: GTCTATCGCCTTAAGCTCCCATTGGATCAATCCTCG...ACAGTGCCAAGCAGACAGAAGTTTAAAGAACAACTTTAGGGACTTGTTTATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TGGATAAACAAGTCCCTAAAGTTGTTCTTTAAACTTCTGTCTGCTTGGCACTGTTTGGGAGACTCCAATTaGCGGAACTTCATGTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WINKSLKLFFKLLSAWHCLGDSN*RNFMLG Trigger: CCCTAACATGAAGTTCCGCCAATTGGAGTCTCCCAA...ACAGTGCCAAGCAGACAGAAGTTTAAAGAACAACTTTAGGGACTTGTTTATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TGTATAAAGAATACCACAGCAAAAGCTGATCATTCACCAGGAAAACCATACCACCAGCCTGCAAGGCGATaGATATTTTGCCTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CIKNTTAKADHSPGKPYHQPARR*IFCLSE Trigger: CTCAGAAAGGCAAAATATCCATCGCCTTGCAGGCTG...GTGGTATGGTTTTCCTGGTGAATGATCAGCTTTTGCTGTGGTATTCTTTATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTAAACTTCTGTCTGCTTGGCACTGTTATCCCTACCGTATTCTATGCCTTACCAAAAATAGGCTCTaGCAGCCAGCCTATATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FFKLLSAWHCYPYRILCLTKNRL*QPAYIK Trigger: TTTGATATAGGCTGGCTGGCAGAGCCTATTTTTGGT...AAGGCATAGAATACGGTAGGGATAACAGTGCCAAGCAGACAGAAGTTTAAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CCA 90 bp | TGTATAAAGAATACCACAGCAAAAGCTGATCATTCACCAGGAAAACCATACCACAGAGATGCCAGACTTTaGCATGAGCCAAAAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CIKNTTAKADHSPGKPYHRDARL*HEPKVG Trigger: ACCTACTTTTGGCTCATGCCAAAGTCTGGCATCTCT...GTGGTATGGTTTTCCTGGTGAATGATCAGCTTTTGCTGTGGTATTCTTTATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR CCA 90 bp | GCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATCAATTCCACAATAAATATTaGAGGGTGGTTATATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AMPAMTDLSCLIWYQGYQFHNKY*RVVIFQ Trigger: CTGGAATATAACCACCCTCCAATATTTATTGTGGAA...TTGATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR CCA 90 bp | TGTATAAAGAATACCACAGCAAAAGCTGATCATTCACCAGGAAAACCATACCACTTATCTGAGGCCGGATaGCAGAGAAATCAACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CIKNTTAKADHSPGKPYHLSEAG*QRNQHS Trigger: ACTGTGTTGATTTCTCTGCCATCCGGCCTCAGATAA...GTGGTATGGTTTTCCTGGTGAATGATCAGCTTTTGCTGTGGTATTCTTTATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATGTAATGTTTCATAGATaGTTTGGGCTCAAACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: VAMPAMTDLSCLIWYQGYVMFHR*FGLKLI Trigger: AATCAGTTTGAGCCCAAACCATCTATGAAACATTAC...ATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR TCA 90 bp | TGTATAAAGAATACCACAGCAAAAGCTGATCATTCACCAGGAAAACCATACCACAAAGACTTCCGGGTTTaGAAAAATCCACATTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CIKNTTAKADHSPGKPYHKDFRV*KNPHSV Trigger: CACCGAATGTGGATTTTTTCAAACCCGGAAGTCTTT...GTGGTATGGTTTTCCTGGTGAATGATCAGCTTTTGCTGTGGTATTCTTTATACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR TCA 90 bp | TGGATAAACAAGTCCCTAAAGTTGTTCTTTAAACTTCTGTCTGCTTGGCACTGTAAACAAGAAACGAGATaGAGACCAGCAAAGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WINKSLKLFFKLLSAWHCKQETR*RPAKTS Trigger: GGAAGTCTTTGCTGGTCTTCATCTCGTTTCTTGTTT...ACAGTGCCAAGCAGACAGAAGTTTAAAGAACAACTTTAGGGACTTGTTTATCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS GCA 90 bp | GCTCCAGCAGCCGCCGGTAGTAGCGCAGCCCCTCGCGGTTGGGAGTaGCCGCGGTGCCATTGGGGAGCACCCGCGCCCACGATATGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: APAAAGSSAAPRGWE*PRCHWGAPAPTIWR Trigger: TCTCCATATCGTGGGCGCGGGTGCTCCCCAATGGCACCGCGGGCACTCCCAACCGCGAGGGGCTGCGCTACTACCGGCGGCTGCTGGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS GCA 90 bp | GCCGCCGGTAGTAGCGCAGCCCCTCGCGGTTGGGAGTGCCCGCGGTaGCATTGGGGAGCACCCGCGCCCACGATATGGAGAAGCGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: AAGSSAAPRGWECPR*HWGAPAPTIWRSGS Trigger: ACTACCGCTTCTCCATATCGTGGGCGCGGGTGCTCCCCAATGGCACCGCGGGCACTCCCAACCGCGAGGGGCTGCGCTACTACCGGCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS GCA 90 bp | GAGCCAAAAGTAGGTTGTGGGCAACCAGGTACCCGAGCCTGGAGCTaGCCCTCACGCCCGGGGCCAGGCGCCCGGTGGCATACCCGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EPKVGCGQPGTRAWS*PSRPGPGARWHTRA Trigger: GGCACGGGTATGCCACCGGGCGCCTGGCCCCGGGCGTGAGGGGCAGCTCCAGGCTCGGGTACCTGGTTGCCCACAACCTACTTTTGGCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS GCA 90 bp | CTTTGCCGTGCTGTCGCCAGCCGCCCTCGGTCTGATAGGCGGCGCTaGCTACCGCCCAGAGGAAACCGTCGGGGAAGGTGTCGTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LCRAVASRPRSDRRR*LPPRGNRRGRCRGG Trigger: TCCTCCACGACACCTTCCCCGACGGTTTCCTCTGGGCGGTAGGCAGCGCCGCCTATCAGACCGAGGGCGGCTGGCGACAGCACGGCAAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS CCA 90 bp | CAGGGCGCGATTGGCCCATCCGCCATAGGTGTCCTGCAGGCGCTGTaGCAGGTCCCAATGGTACAGGGTAACCACCGGCTGCACGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QGAIGPSAIGVLQAL*QVPMVQGNHRLHAQ Trigger: CTGGGCGTGCAGCCGGTGGTTACCCTGTACCATTGGGACCTGCCACAGCGCCTGCAGGACACCTATGGCGGATGGGCCAATCGCGCCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CCA 90 bp | TGGCAGGCCTTGGTGCGGGGCTGCTGGCTGCCACAGGGCCACCACTaGAGTGATGTTGGCGTGCACCAGCTCGCTGATCATGCAGCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: WQALVRGCWLPQGHH*SDVGVHQLADHAAV Trigger: TACCGCTGCATGATCAGCGAGCTGGTGCACGCCAACATCACTCCAGTGGTGGCCCTGTGGCAGCCAGCAGCCCCGCACCAAGGCCTGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS GCA 90 bp | TGTTTTGCAAGGGCATGTGGCAGGCCTTGGTGCGGGGCTGCTGGCTaGCACAGGGCCACCACTGGAGTGATGTTGGCGTGCACCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CFARACGRPWCGAAG*HRATTGVMLACTSS Trigger: CGAGCTGGTGCACGCCAACATCACTCCAGTGGTGGCCCTGTGGCAGCCAGCAGCCCCGCACCAAGGCCTGCCACATGCCCTTGCAAAACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CCA 90 bp | TGTCGCGGTAGACGTTGTTGTAACTATCGCTGGCCACATCTCCAGTaGAGGACAGGGGAGGCGACGGGGCACCCGACGGCGCCACGACGA | + |
|
Preference number: 5 (lower is better) Translates to: CRGRRCCNYRWPHLQ*RTGEATGHPTAPRR Trigger: TCGTCGTGGCGCCGTCGGGTGCCCCGTCGCCTCCCCTGTCCTCCACTGGAGATGTGGCCAGCGATAGTTACAACAACGTCTACCGCGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS CCA 90 bp | CCCATGTTTTGCAAGGGCATGTGGCAGGCCTTGGTGCGGGGCTGCTaGCTGCCACAGGGCCACCACTGGAGTGATGTTGGCGTGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: PMFCKGMWQALVRGC*LPQGHHWSDVGVHQ Trigger: CTGGTGCACGCCAACATCACTCCAGTGGTGGCCCTGTGGCAGCCAGCAGCCCCGCACCAAGGCCTGCCACATGCCCTTGCAAAACATGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS TCA 90 bp | CCAGAGGCAAGATCAGGGCCCAGTCCAGGGAGAAGCGAAAGTGGGTaGCCCGCATTTCTCGAAGTAAGGTTATCTGAGGCCGGATGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PEARSGPSPGRSESG*PAFLEVRLSEAGWQ Trigger: CTGCCATCCGGCCTCAGATAACCTTACTTCGAGAAATGCGGGTCACCCACTTTCGCTTCTCCCTGGACTGGGCCCTGATCTTGCCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS TCA 90 bp | AGCCAGTTGAGCACTTTGCGCAGCCCCCAAGGCACCACTGCCACCTaGCTGGGAGAGTTGAGCCATGTGATGTCAGTCATCTCCTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: SQLSTLRSPQGTTAT*LGELSHVMSVISCT Trigger: GGTACAGGAGATGACTGACATCACATGGCTCAACTCTCCCAGTCAGGTGGCAGTGGTGCCTTGGGGGCTGCGCAAAGTGCTCAACTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR CAA 90 bp | GTAGCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATCAGATGGACGCGCCTTaGCCGTGCTGTCGCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VAMPAMTDLSCLIWYQGYQMDAP*PCCRQP Trigger: CGGCTGGCGACAGCACGGCAAAGGCGCGTCCATCTG...ATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR CAA 90 bp | TGGATAAACAAGTCCCTAAAGTTGTTCTTTAAACTTCTGTCTGCTTGGCACTGTCGCAGCCCCTCGCGGTaGGGAGTGCCCGCGGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WINKSLKLFFKLLSAWHCRSPSR*GVPAVP Trigger: TGGCACCGCGGGCACTCCCAACCGCGAGGGGCTGCG...ACAGTGCCAAGCAGACAGAAGTTTAAAGAACAACTTTAGGGACTTGTTTATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS GCA 90 bp | GATCCAGAGATTGACCCAGTGACCCAACTCTTTAAAACACAGGTTTaGGTAGTCTGCAAACGCCAGAGCAGTGTGCGGGTTCTCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DPEIDPVTQLFKTQV*VVCKRQSSVRVLPG Trigger: GCCTGGGAGAACCCGCACACTGCTCTGGCGTTTGCAGACTACGCAAACCTGTGTTTTAAAGAGTTGGGTCACTGGGTCAATCTCTGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CAA 90 bp | GTAGCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATCCCAGGCCCCATGTTTaGCAAGGGCATGTGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VAMPAMTDLSCLIWYQGYPRPHV*QGHVAG Trigger: GCCTGCCACATGCCCTTGCAAAACATGGGGCCTGGG...ATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS GCA 90 bp | ATTGACCCAGTGACCCAACTCTTTAAAACACAGGTTTGCGTAGTCTaGAAACGCCAGAGCAGTGTGCGGGTTCTCCCAGGCCCCATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IDPVTQLFKTQVCVV*KRQSSVRVLPGPMF Trigger: AAACATGGGGCCTGGGAGAACCCGCACACTGCTCTGGCGTTTGCAGACTACGCAAACCTGTGTTTTAAAGAGTTGGGTCACTGGGTCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CAA 90 bp | TGGATAAACAAGTCCCTAAAGTTGTTCTTTAAACTTCTGTCTGCTTGGCACTGTGGCATGTGGCAGGCCTaGGTGCGGGGCTGCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WINKSLKLFFKLLSAWHCGMWQA*VRGCWL Trigger: CAGCCAGCAGCCCCGCACCAAGGCCTGCCACATGCC...ACAGTGCCAAGCAGACAGAAGTTTAAAGAACAACTTTAGGGACTTGTTTATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS TCA 90 bp | GGTTCTATCCAGTCAGCCTGCAAGGCGATGGATATTTTGCCTTTCTaGGCCGCCCTAAACTTGTCATCGTACAGATGCCAAGCCAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSIQSACKAMDILPF*AALNLSSYRCQAKA Trigger: TGCCTTGGCTTGGCATCTGTACGATGACAAGTTTAGGGCGGCTCAGAAAGGCAAAATATCCATCGCCTTGCAGGCTGACTGGATAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR CAA 90 bp | TCCGGAGGTCATGAGTTCAAATCCCAGAAACCACATGGTGGCTCACAACCTTCGGTTGGGAGACTCCAATaGGCGGAACTTCATGTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGGHEFKSQKPHGGSQPSVGRLQ*AELHVR Trigger: CCTAACATGAAGTTCCGCCAATTGGAGTCTCCCAAC...CGAAGGTTGTGAGCCACCATGTGGTTTCTGGGATTTGAACTCATGACCTCCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CAA 90 bp | GCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATCAAAGAAGCTGCCTCAGGTaGGGAGACTCCAATTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AMPAMTDLSCLIWYQGYQRSCLR*GDSNWR Trigger: CCGCCAATTGGAGTCTCCCAACCTGAGGCAGCTTCT...TTGATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CAA 90 bp | GTAGCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATAACCGTGTGGTTCACTaGGGTCTGGTTACCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VAMPAMTDLSCLIWYQGYNRVVH*GLVTQR Trigger: CCTCTGGGTAACCAGACCCAAGTGAACCACACGGTT...ATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR CAA 90 bp | GCCATGCCTGCTATGACGGATTTATCTTGCCTGATCTGGTATCAGGGTTATCAATTGAACCTTAGCCAGTaGAGCACTTTGCGCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AMPAMTDLSCLIWYQGYQLNLSQ*STLRSP Trigger: GGGGCTGCGCAAAGTGCTCAACTGGCTAAGGTTCAA...TTGATAACCCTGATACCAGATCAGGCAAGATAAATCCGTCATAGCAGGCATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS TCA 90 bp | CCTATATCAAATTCCAAAACTCTCTCGGCCACTTCTTTGTCATTTTaGGAGAAAGGGCAGGCCGGTTCTATCCAGTCAGCCTGCAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PISNSKTLSATSLSF*EKGQAGSIQSACKA Trigger: CGCCTTGCAGGCTGACTGGATAGAACCGGCCTGCCCTTTCTCTCAAAATGACAAAGAAGTGGCCGAGAGAGTTTTGGAATTTGATATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS GCA 90 bp | GTCCCTCATCACACGTGGATAATCTCCGGAACCAAAAATAGGCTCTaGCAGCCAGCCTATATCAAATTCCAAAACTCTCTCGGCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VPHHTWIISGTKNRL*QPAYIKFQNSLGHF Trigger: GAAGTGGCCGAGAGAGTTTTGGAATTTGATATAGGCTGGCTGGCAGAGCCTATTTTTGGTTCCGGAGATTATCCACGTGTGATGAGGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CAA 90 bp | TCCGGAGGTCATGAGTTCAAATCCCAGAAACCACATGGTGGCTCACAACCTTCGAAAGGAGGAAAGCCATaGTCCTCTATCAGCTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGGHEFKSQKPHGGSQPSKGGKP*SSISFW Trigger: CCAAAAGCTGATAGAGGACAATGGCTTTCCTCCTTT...CGAAGGTTGTGAGCCACCATGTGGTTTCTGGGATTTGAACTCATGACCTCCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CCA 90 bp | GCCATTGTCCTCTATCAGCTTTTGGTAGAACAAGGCCGAAGACTTTaGCAACAGCTCCTTGTCCTGACTCAGAAAGTCAACGTAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AIVLYQLLVEQGRRL*QQLLVLTQKVNVEE Trigger: CTCTTCTACGTTGACTTTCTGAGTCAGGACAAGGAGCTGTTGCCAAAGTCTTCGGCCTTGTTCTACCAAAAGCTGATAGAGGACAATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS GCA 90 bp | AATATTGGAGGGTGGTTATATTCCAGATCTATCCAAGACAGAAGCTaGCTCAGGTTGGGAGACTCCAATTGGCGGAACTTCATGTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NIGGWLYSRSIQDRS*LRLGDSNWRNFMLG Trigger: CCCTAACATGAAGTTCCGCCAATTGGAGTCTCCCAACCTGAGGCAGCTTCTGTCTTGGATAGATCTGGAATATAACCACCCTCCAATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CAA 90 bp | TTCTTTAAACTTCTGTCTGCTTGGCACTGTTATCCCTACCGTATTCTATGCCTTGGGAGGTCTCCGTACTaGAACCTTAGCCAGTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FFKLLSAWHCYPYRILCLGRSPY*NLSQLS Trigger: GCTCAACTGGCTAAGGTTCAAGTACGGAGACCTCCC...AAGGCATAGAATACGGTAGGGATAACAGTGCCAAGCAGACAGAAGTTTAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CAA 90 bp | AAGAATCTCCAACAAGCAGGCTCTGAAAGGAAAGTTGGTAAGAGAAAGCCCTCATCATCATCGATTCCATaGGCTGTCACATACATCGGG | + |
|
Preference number: 5 (lower is better) Translates to: KNLQQAGSERKVGKRKPSSSSIP*AVTYIG Trigger: CCCGATGTATGTGACAGCCAATGGAATCGATGATGA...TGAGGGCTTTCTCTTACCAACTTTCCTTTCAGAGCCTGCTTGTTGGAGATTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CAA 90 bp | AAGAATCTCCAACAAGCAGGCTCTGAAAGGAAAGTTGGTAAGAGAAAGCCCTCAGTCATTCTTCGAGGATaGATCCAATGGGAGCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: KNLQQAGSERKVGKRKPSVILRG*IQWELK Trigger: CTTAAGCTCCCATTGGATCAATCCTCGAAGAATGAC...TGAGGGCTTTCTCTTACCAACTTTCCTTTCAGAGCCTGCTTGTTGGAGATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR CAA 90 bp | TGGATAAACAAGTCCCTAAAGTTGTTCTTTAAACTTCTGTCTGCTTGGCACTGTTTGGCATCATCCCTTTaGGTGGTTCCCGAGACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: WINKSLKLFFKLLSAWHCLASSL*VVPETN Trigger: GTTTGTCTCGGGAACCACCAAAAGGGATGATGCCAA...ACAGTGCCAAGCAGACAGAAGTTTAAAGAACAACTTTAGGGACTTGTTTATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS-3UTR CAA 90 bp | TTCTTTAAACTTCTGTCTGCTTGGCACTGTTATCCCTACCGTATTCTATGCCTTGTCCTCTATCAGCTTTaGGTAGAACAAGGCCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FFKLLSAWHCYPYRILCLVLYQL*VEQGRR Trigger: TCTTCGGCCTTGTTCTACCAAAAGCTGATAGAGGAC...AAGGCATAGAATACGGTAGGGATAACAGTGCCAAGCAGACAGAAGTTTAAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTAAACTTCTGTCTGCTTGGCACTGTTATCCCTACCGTATTCTATGCCTTGAACCCAGGAAGCCATaGCTGTCAATAATTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FFKLLSAWHCYPYRILCLEPRKP*LSIIFL Trigger: CAGGAAAATTATTGACAGCAATGGCTTCCTGGGTTC...AAGGCATAGAATACGGTAGGGATAACAGTGCCAAGCAGACAGAAGTTTAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS TCA 72 bp | GGAGCGCGCGCGAAGCGAGCCCAGGTCTGCGCGCCCTaGCCCGGCTCAGCGCTCAGGCAGCGGGCGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GARAKRAQVCAP*PGSALRQRARR Trigger: CCTGCGCGCCCGCTGCCTGAGCGCTGAGCCGGGTCAGGGCGCGCAGACCTGGGCTCGCTTCGCGCGCGCTCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS GCA 72 bp | GCCGCCGGTAGTAGCGCAGCCCCTCGCGGTTGGGAGTaGCCGCGGTGCCATTGGGGAGCACCCGCGCCCACG | + |
|
Preference number: 6 (lower is better) Translates to: AAGSSAAPRGWE*PRCHWGAPAPT Trigger: CGTGGGCGCGGGTGCTCCCCAATGGCACCGCGGGCACTCCCAACCGCGAGGGGCTGCGCTACTACCGGCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS CCA 72 bp | CCAGCAGCCGCCGGTAGTAGCGCAGCCCCTCGCGGTTaGGAGTGCCCGCGGTGCCATTGGGGAGCACCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: PAAAGSSAAPRG*ECPRCHWGAPA Trigger: CGCGGGTGCTCCCCAATGGCACCGCGGGCACTCCCAACCGCGAGGGGCTGCGCTACTACCGGCGGCTGCTGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS GCA 72 bp | GTAGGTTGTGGGCAACCAGGTACCCGAGCCTGGAGCTaGCCCTCACGCCCGGGGCCAGGCGCCCGGTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VGCGQPGTRAWS*PSRPGPGARWH Trigger: ATGCCACCGGGCGCCTGGCCCCGGGCGTGAGGGGCAGCTCCAGGCTCGGGTACCTGGTTGCCCACAACCTAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS CAA 72 bp | CGCAGCCCCTCGCGGTTGGGAGTGCCCGCGGTGCCATaGGGGAGCACCCGCGCCCACGATATGGAGAAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RSPSRLGVPAVP*GSTRAHDMEKR Trigger: CCGCTTCTCCATATCGTGGGCGCGGGTGCTCCCCAATGGCACCGCGGGCACTCCCAACCGCGAGGGGCTGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS CCA 72 bp | GCAGCCCCTCGCGGTTGGGAGTGCCCGCGGTGCCATTaGGGAGCACCCGCGCCCACGATATGGAGAAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: AAPRGWECPRCH*GAPAPTIWRSG Trigger: ACCGCTTCTCCATATCGTGGGCGCGGGTGCTCCCCAATGGCACCGCGGGCACTCCCAACCGCGAGGGGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS GCA 72 bp | GCTGTCGCCAGCCGCCCTCGGTCTGATAGGCGGCGCTaGCTACCGCCCAGAGGAAACCGTCGGGGAAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: AVASRPRSDRRR*LPPRGNRRGRC Trigger: ACACCTTCCCCGACGGTTTCCTCTGGGCGGTAGGCAGCGCCGCCTATCAGACCGAGGGCGGCTGGCGACAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS GCA 72 bp | AGTAGCGCAGCCCCTCGCGGTTGGGAGTGCCCGCGGTaGCATTGGGGAGCACCCGCGCCCACGATATGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSAAPRGWECPR*HWGAPAPTIWR Trigger: TCTCCATATCGTGGGCGCGGGTGCTCCCCAATGGCACCGCGGGCACTCCCAACCGCGAGGGGCTGCGCTACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS TCA 72 bp | GCACCCGCGCCCACGATATGGAGAAGCGGTAGTGGGTaGCCCCCAGTTCGCGCAGCCCCTCTGTGTCGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: APAPTIWRSGSG*PPVRAAPLCRG Trigger: ACCGCGACACAGAGGGGCTGCGCGAACTGGGGGTCACCCACTACCGCTTCTCCATATCGTGGGCGCGGGTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS CCA 72 bp | TGCAAGGGCATGTGGCAGGCCTTGGTGCGGGGCTGCTaGCTGCCACAGGGCCACCACTGGAGTGATGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CKGMWQALVRGC*LPQGHHWSDVG Trigger: GCCAACATCACTCCAGTGGTGGCCCTGTGGCAGCCAGCAGCCCCGCACCAAGGCCTGCCACATGCCCTTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS TCA 72 bp | CACCGAAGTGGCGGAAGCAGAGCTCGGCATAATCCCTaGAATGGTCGGCCAGGGCGCGATTGGCCCATCCGC | + |
|
Preference number: 6 (lower is better) Translates to: HRSGGSRARHNP*NGRPGRDWPIR Trigger: GCGGATGGGCCAATCGCGCCCTGGCCGACCATTTCAGGGATTATGCCGAGCTCTGCTTCCGCCACTTCGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS CCA 72 bp | TTGGTGCGGGGCTGCTGGCTGCCACAGGGCCACCACTaGAGTGATGTTGGCGTGCACCAGCTCGCTGATCAT | + |
|
Preference number: 6 (lower is better) Translates to: LVRGCWLPQGHH*SDVGVHQLADH Trigger: ATGATCAGCGAGCTGGTGCACGCCAACATCACTCCAGTGGTGGCCCTGTGGCAGCCAGCAGCCCCGCACCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS GCA 72 bp | TTTTGCAAGGGCATGTGGCAGGCCTTGGTGCGGGGCTaGTGGCTGCCACAGGGCCACCACTGGAGTGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: FCKGMWQALVRG*WLPQGHHWSDV Trigger: AACATCACTCCAGTGGTGGCCCTGTGGCAGCCAGCAGCCCCGCACCAAGGCCTGCCACATGCCCTTGCAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS GCA 72 bp | CCAGTTGAGCACTTTGCGCAGCCCCCAAGGCACCACTaGCACCTGACTGGGAGAGTTGAGCCATGTGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: PVEHFAQPPRHH*HLTGRVEPCDV Trigger: GACATCACATGGCTCAACTCTCCCAGTCAGGTGGCAGTGGTGCCTTGGGGGCTGCGCAAAGTGCTCAACTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS CCA 72 bp | CCTCTGTGTCGCGGTAGACGTTGTTGTAACTATCGCTaGCCACATCTCCAGTGGAGGACAGGGGAGGCGACG | + |
|
Preference number: 6 (lower is better) Translates to: PLCRGRRCCNYR*PHLQWRTGEAT Trigger: CGTCGCCTCCCCTGTCCTCCACTGGAGATGTGGCCAGCGATAGTTACAACAACGTCTACCGCGACACAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
||
| CDS CAA 90 bp | CTCGCTGATCATGCAGCGGTAGAAGTGCAGAACCGTGTGGTTCACTaGGGTCTGGTTACCCAGAGGCAAGATCAGGGCCCAGTCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LADHAAVEVQNRVVH*GLVTQRQDQGPVQG Trigger: TCCCTGGACTGGGCCCTGATCTTGCCTCTGGGTAACCAGACCCAAGTGAACCACACGGTTCTGCACTTCTACCGCTGCATGATCAGCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CAA 72 bp | TACATCGGGAGGTCTCCGTACTTGAACCTTAGCCAGTaGAGCACTTTGCGCAGCCCCCAAGGCACCACTGCC | + |
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Preference number: 6 (lower is better) Translates to: YIGRSPYLNLSQ*STLRSPQGTTA Trigger: GGCAGTGGTGCCTTGGGGGCTGCGCAAAGTGCTCAACTGGCTAAGGTTCAAGTACGGAGACCTCCCGATGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CAA 72 bp | CATGCAGCGGTAGAAGTGCAGAACCGTGTGGTTCACTaGGGTCTGGTTACCCAGAGGCAAGATCAGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: HAAVEVQNRVVH*GLVTQRQDQGP Trigger: TGGGCCCTGATCTTGCCTCTGGGTAACCAGACCCAAGTGAACCACACGGTTCTGCACTTCTACCGCTGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS TCA 72 bp | AGATCAGGGCCCAGTCCAGGGAGAAGCGAAAGTGGGTaGCCCGCATTTCTCGAAGTAAGGTTATCTGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: RSGPSPGRSESG*PAFLEVRLSEA Trigger: GGCCTCAGATAACCTTACTTCGAGAAATGCGGGTCACCCACTTTCGCTTCTCCCTGGACTGGGCCCTGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CCA 72 bp | GTGGTGCCCGGCACGATAGGTCATGTTCCGTGTGTTTaGCTCGTTCATGGTGATCCAGAGATTGACCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: VVPGTIGHVPCV*LVHGDPEIDPV Trigger: CACTGGGTCAATCTCTGGATCACCATGAACGAGCCAAACACACGGAACATGACCTATCGTGCCGGGCACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CAA 72 bp | CCATTGGCTGTCACATACATCGGGAGGTCTCCGTACTaGAACCTTAGCCAGTTGAGCACTTTGCGCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: PLAVTYIGRSPY*NLSQLSTLRSP Trigger: GGGGCTGCGCAAAGTGCTCAACTGGCTAAGGTTCAAGTACGGAGACCTCCCGATGTATGTGACAGCCAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CAA 72 bp | GAGTCTTGCTCGGCGTGGGGGTCATCATCGATTCCATaGGCTGTCACATACATCGGGAGGTCTCCGTACTTG | + |
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Preference number: 6 (lower is better) Translates to: ESCSAWGSSSIP*AVTYIGRSPYL Trigger: CAAGTACGGAGACCTCCCGATGTATGTGACAGCCAATGGAATCGATGATGACCCCCACGCCGAGCAAGACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CAA 90 bp | TCATCGATTCCATTGGCTGTCACATACATCGGGAGGTCTCCGTACTaGAACCTTAGCCAGTTGAGCACTTTGCGCAGCCCCCAAGGCACC | + |
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Preference number: 6 (lower is better) Translates to: SSIPLAVTYIGRSPY*NLSQLSTLRSPQGT Trigger: GGTGCCTTGGGGGCTGCGCAAAGTGCTCAACTGGCTAAGGTTCAAGTACGGAGACCTCCCGATGTATGTGACAGCCAATGGAATCGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS GCA 72 bp | GTGACCCAACTCTTTAAAACACAGGTTTGCGTAGTCTaGAAACGCCAGAGCAGTGTGCGGGTTCTCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: VTQLFKTQVCVV*KRQSSVRVLPG Trigger: GCCTGGGAGAACCCGCACACTGCTCTGGCGTTTGCAGACTACGCAAACCTGTGTTTTAAAGAGTTGGGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CAA 90 bp | ATCCTCAGTGAGTCTTGCTCGGCGTGGGGGTCATCATCGATTCCATaGGCTGTCACATACATCGGGAGGTCTCCGTACTTGAACCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: ILSESCSAWGSSSIP*AVTYIGRSPYLNLS Trigger: GCTAAGGTTCAAGTACGGAGACCTCCCGATGTATGTGACAGCCAATGGAATCGATGATGACCCCCACGCCGAGCAAGACTCACTGAGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS TCA 72 bp | CAGTCAGCCTGCAAGGCGATGGATATTTTGCCTTTCTaGGCCGCCCTAAACTTGTCATCGTACAGATGCCAA | + |
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Preference number: 6 (lower is better) Translates to: QSACKAMDILPF*AALNLSSYRCQ Trigger: TTGGCATCTGTACGATGACAAGTTTAGGGCGGCTCAGAAAGGCAAAATATCCATCGCCTTGCAGGCTGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS GCA 72 bp | GGGTGGTTATATTCCAGATCTATCCAAGACAGAAGCTaGCTCAGGTTGGGAGACTCCAATTGGCGGAACTTC | + |
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Preference number: 6 (lower is better) Translates to: GWLYSRSIQDRS*LRLGDSNWRNF Trigger: GAAGTTCCGCCAATTGGAGTCTCCCAACCTGAGGCAGCTTCTGTCTTGGATAGATCTGGAATATAACCACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS GCA 72 bp | ATTGACCCAGTGACCCAACTCTTTAAAACACAGGTTTaGGTAGTCTGCAAACGCCAGAGCAGTGTGCGGGTT | + |
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Preference number: 6 (lower is better) Translates to: IDPVTQLFKTQV*VVCKRQSSVRV Trigger: AACCCGCACACTGCTCTGGCGTTTGCAGACTACGCAAACCTGTGTTTTAAAGAGTTGGGTCACTGGGTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CCA 72 bp | TCATCGGATCCTCCTTTTCCCAGTCTACCAGAATGGTaGTGTAATGACTCACCGCCAGGAAGTCAAAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: SSDPPFPSLPEW*CNDSPPGSQRN Trigger: GTTCCTTTGACTTCCTGGCGGTGAGTCATTACACCACCATTCTGGTAGACTGGGAAAAGGAGGATCCGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CAA 90 bp | GCCTATATCAAATTCCAAAACTCTCTCGGCCACTTCTTTGTCATTTaGAGAGAAAGGGCAGGCCGGTTCTATCCAGTCAGCCTGCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: AYIKFQNSLGHFFVI*RERAGRFYPVSLQG Trigger: GCCTTGCAGGCTGACTGGATAGAACCGGCCTGCCCTTTCTCTCAAAATGACAAAGAAGTGGCCGAGAGAGTTTTGGAATTTGATATAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CCA 72 bp | ATTTCATCGGATCCTCCTTTTCCCAGTCTACCAGAATaGTGGTGTAATGACTCACCGCCAGGAAGTCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: ISSDPPFPSLPE*WCNDSPPGSQR Trigger: CCTTTGACTTCCTGGCGGTGAGTCATTACACCACCATTCTGGTAGACTGGGAAAAGGAGGATCCGATGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CAA 90 bp | AGCCATTGTCCTCTATCAGCTTTTGGTAGAACAAGGCCGAAGACTTaGGCAACAGCTCCTTGTCCTGACTCAGAAAGTCAACGTAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SHCPLSAFGRTRPKT*ATAPCPDSESQRRR Trigger: TCTTCTACGTTGACTTTCTGAGTCAGGACAAGGAGCTGTTGCCAAAGTCTTCGGCCTTGTTCTACCAAAAGCTGATAGAGGACAATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS TCA 72 bp | TCCAATTGGCGGAACTTCATGTTAGGGTCCAATAGCTaGAAGCTCAAGGTTGGTCCGAAGGAGAGAGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SNWRNFMLGSNS*KLKVGPKERAK Trigger: TTTTGCTCTCTCCTTCGGACCAACCTTGAGCTTTCAGCTATTGGACCCTAACATGAAGTTCCGCCAATTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CCA 72 bp | CTCTATCAGCTTTTGGTAGAACAAGGCCGAAGACTTTaGCAACAGCTCCTTGTCCTGACTCAGAAAGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: LYQLLVEQGRRL*QQLLVLTQKVN Trigger: GTTGACTTTCTGAGTCAGGACAAGGAGCTGTTGCCAAAGTCTTCGGCCTTGTTCTACCAAAAGCTGATAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CAA 72 bp | CCTCTATCAGCTTTTGGTAGAACAAGGCCGAAGACTTaGGCAACAGCTCCTTGTCCTGACTCAGAAAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: PLSAFGRTRPKT*ATAPCPDSESQ Trigger: TTGACTTTCTGAGTCAGGACAAGGAGCTGTTGCCAAAGTCTTCGGCCTTGTTCTACCAAAAGCTGATAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS GCA 72 bp | CACACGTGGATAATCTCCGGAACCAAAAATAGGCTCTaGCAGCCAGCCTATATCAAATTCCAAAACTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: HTWIISGTKNRL*QPAYIKFQNSL Trigger: GAGAGAGTTTTGGAATTTGATATAGGCTGGCTGGCAGAGCCTATTTTTGGTTCCGGAGATTATCCACGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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| CDS CCA 72 bp | AGGCAGAAGAGACGAGAGGTTGTTCTTCATACTCTCTaGGTAGTCGCCATCAATAAATATGGGTTTGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: RQKRREVVLHTL*VVAINKYGFGK Trigger: TTTGCCAAACCCATATTTATTGATGGCGACTACCCAGAGAGTATGAAGAACAACCTCTCGTCTCTTCTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078856.8 |
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