Pregenerated sensors for KIZ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074749Ensembl transcript IDs: ENSMUST00000099278.9, ENSMUST00000156232.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCCCACCCTTTCGTAGTAGCTGGGGCTCGCCAAGGGCGCAGAGGTaGCGGAGGCCTGGCGCAGGCCACCACCACCGCCACCGCGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: GPPFRSSWGSPRAQR*RRPGAGHHHRHRAL Trigger: GAGGGCGCGGTGGCGGTGGTGGTGGCCTGCGCCAGGCCTCCGCCACCTCTGCGCCCTTGGCGAGCCCCAGCTACTACGAAAGGGTGGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099278.9 ENSMUST00000156232.2 |
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| CDS GCA 90 bp | AAGAGCGAATCTTGTCTTGGTTCAGTGTGGGCCGCTCGCAAGGCCTaGATTCCATCTTTGCCCGCCATCTTGGCTCCTGGATTCGACAGT | + |
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Preference number: 5 (lower is better) Translates to: KSESCLGSVWAARKA*IPSLPAILAPGFDS Trigger: ACTGTCGAATCCAGGAGCCAAGATGGCGGGCAAAGATGGAATGCAGGCCTTGCGAGCGGCCCACACTGAACCAAGACAAGATTCGCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS TCA 90 bp | AGAATGCTTCTCTCCAGCCCACTTCTTTGCAGATGTACAGTGTTCTaGAGCTGCCATCATGGGGACCAGCGGGCCGGCTCTTTCTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: RMLLSSPLLCRCTVF*SCHHGDQRAGSFFP Trigger: AGGGAAGAAAGAGCCGGCCCGCTGGTCCCCATGATGGCAGCTTCAGAACACTGTACATCTGCAAAGAAGTGGGCTGGAGAGAAGCATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS GCA 90 bp | ACAGAAACTGTGAGGTCGCTGCTGCTGCATGAGCTTCCCTCCTCCTaGTCTTCCTCATGTTTCAGGACGGCCTTCTGTGACTTTGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: TETVRSLLLHELPSS*SSSCFRTAFCDFES Trigger: GGACTCAAAGTCACAGAAGGCCGTCCTGAAACATGAGGAAGAGCAGGAGGAGGGAAGCTCATGCAGCAGCAGCGACCTCACAGTTTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CCA 90 bp | TGTAAAACATATTCCGTGAAGAGCGAATCTTGTCTTGGTTCAGTGTaGGCCGCTCGCAAGGCCTGCATTCCATCTTTGCCCGCCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: CKTYSVKSESCLGSV*AARKACIPSLPAIL Trigger: CAAGATGGCGGGCAAAGATGGAATGCAGGCCTTGCGAGCGGCCCACACTGAACCAAGACAAGATTCGCTCTTCACGGAATATGTTTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CCA 90 bp | TCACCATTAGTCTGCACTACACAGCTGTCTGTCACACAGCTGCTCTaGGCTGTCTGTTGGTGTGAATGTGGGTCAGAGATTGAAAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SPLVCTTQLSVTQLL*AVCWCECGSEIEKF Trigger: GAACTTTTCAATCTCTGACCCACATTCACACCAACAGACAGCCCAGAGCAGCTGTGTGACAGACAGCTGTGTAGTGCAGACTAATGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099278.9 ENSMUST00000156232.2 |
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| CDS TCA 90 bp | CTTGAGATGGCTGACATTTGGCGGCCCATAAAGATTGTTGCTGGTTaGTACAATCCTCTTGACATAGCTGTCCCCGAGTTAATTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LEMADIWRPIKIVAG*YNPLDIAVPELIPA Trigger: GGCAGGAATTAACTCGGGGACAGCTATGTCAAGAGGATTGTATCAACCAGCAACAATCTTTATGGGCCGCCAAATGTCAGCCATCTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099278.9 ENSMUST00000156232.2 |
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| CDS TCA 90 bp | CCCTTTTTGAATCAGGAAAGCTTTGGGTCTGTAAAACATATTCCGTaGAGAGCGAATCTTGTCTTGGTTCAGTGTGGGCCGCTCGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: PFLNQESFGSVKHIP*RANLVLVQCGPLAR Trigger: CCTTGCGAGCGGCCCACACTGAACCAAGACAAGATTCGCTCTTCACGGAATATGTTTTACAGACCCAAAGCTTTCCTGATTCAAAAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS TCA 90 bp | GCTGTCCCCGAGTTAATTCCTGCCTGCACTGCATCCTTCAGTTTTTaGAGCTTCTCTGTATTTGTGGTCAAGTGTTCAACATACGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: AVPELIPACTASFSF*SFSVFVVKCSTYVW Trigger: CCAGACGTATGTTGAACACTTGACCACAAATACAGAGAAGCTTCAAAAACTGAAGGATGCAGTGCAGGCAGGAATTAACTCGGGGACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156232.2 |
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| CDS CCA 90 bp | GGACTTCCTTCACTAGATGAAAAACTAGCTTCCGAGGCGATTTTGTaGGCTGTCTTTGTTGTGAACATGCTGCCACCAATATCCAGACCT | + |
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Preference number: 5 (lower is better) Translates to: GLPSLDEKLASEAIL*AVFVVNMLPPISRP Trigger: AGGTCTGGATATTGGTGGCAGCATGTTCACAACAAAGACAGCCCACAAAATCGCCTCGGAAGCTAGTTTTTCATCTAGTGAAGGAAGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS GCA 90 bp | CAGCAGACTTTCTGCCTTCAGATAAATTACTCTTGCTGTGCTGTGTaGTGCTTCCTATCTCCAAGCAATGAGTTTGTTCTTCTGCAGACA | + |
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Preference number: 5 (lower is better) Translates to: QQTFCLQINYSCCAV*CFLSPSNEFVLLQT Trigger: TGTCTGCAGAAGAACAAACTCATTGCTTGGAGATAGGAAGCAGCACACAGCACAGCAAGAGTAATTTATCTGAAGGCAGAAAGTCTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS GCA 90 bp | AAGGCATTTGACTTTATGGTGGTCACTGGGTCCCTTTTGCTTTCGTaGCTTGACAAAGGACTTCCTTCACTAGATGAAAAACTAGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: KAFDFMVVTGSLLLS*LDKGLPSLDEKLAS Trigger: GGAAGCTAGTTTTTCATCTAGTGAAGGAAGTCCTTTGTCAAGGCACGAAAGCAAAAGGGACCCAGTGACCACCATAAAGTCAAATGCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS TCA 90 bp | TGTCTGATCCCTCTGATCTGCTGGAACTGTCACACTTTAAATCAGTaGTGCTGTTCTCTGGACTTAATCTTTCCTGTAACGAGGAATGGA | + |
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Preference number: 5 (lower is better) Translates to: CLIPLICWNCHTLNQ*CCSLDLIFPVTRNG Trigger: TCCATTCCTCGTTACAGGAAAGATTAAGTCCAGAGAACAGCATCACTGATTTAAAGTGTGACAGTTCCAGCAGATCAGAGGGATCAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS GCA 90 bp | AGGAATGGAGTTCAGCAGACTTTCTGCCTTCAGATAAATTACTCTTaGTGTGCTGTGTGCTGCTTCCTATCTCCAAGCAATGAGTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: RNGVQQTFCLQINYS*CAVCCFLSPSNEFV Trigger: AACAAACTCATTGCTTGGAGATAGGAAGCAGCACACAGCACAGCAAGAGTAATTTATCTGAAGGCAGAAAGTCTGCTGAACTCCATTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS GCA 90 bp | GACTTAATCTTTCCTGTAACGAGGAATGGAGTTCAGCAGACTTTCTaGCTTCAGATAAATTACTCTTGCTGTGCTGTGTGCTGCTTCCTA | + |
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Preference number: 5 (lower is better) Translates to: DLIFPVTRNGVQQTF*LQINYSCCAVCCFL Trigger: TAGGAAGCAGCACACAGCACAGCAAGAGTAATTTATCTGAAGGCAGAAAGTCTGCTGAACTCCATTCCTCGTTACAGGAAAGATTAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CCA 90 bp | TCAGTGATGCTGTTCTCTGGACTTAATCTTTCCTGTAACGAGGAATaGAGTTCAGCAGACTTTCTGCCTTCAGATAAATTACTCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: SVMLFSGLNLSCNEE*SSADFLPSDKLLLL Trigger: CAGCAAGAGTAATTTATCTGAAGGCAGAAAGTCTGCTGAACTCCATTCCTCGTTACAGGAAAGATTAAGTCCAGAGAACAGCATCACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CCA 90 bp | CTGCCTGCACTGCATCCTTCAGTTTTTGAAGCTTCTCTGTATTTGTaGTCAAGTGTTCAACATACGTCTGGACACATTCAAACTTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: LPALHPSVFEASLYL*SSVQHTSGHIQTSL Trigger: TAAAGAAGTTTGAATGTGTCCAGACGTATGTTGAACACTTGACCACAAATACAGAGAAGCTTCAAAAACTGAAGGATGCAGTGCAGGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156232.2 |
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| CDS CCA 90 bp | TGTTGGTGTGAATGTGGGTCAGAGATTGAAAAGTTCTTTGTGGGTTaGTTAGATTTCAGCTCTGTACTGAAATCTTCAATGCTTGAGATG | + |
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Preference number: 5 (lower is better) Translates to: CWCECGSEIEKFFVG*LDFSSVLKSSMLEM Trigger: CATCTCAAGCATTGAAGATTTCAGTACAGAGCTGAAATCTAACCAACCCACAAAGAACTTTTCAATCTCTGACCCACATTCACACCAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099278.9 ENSMUST00000156232.2 |
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| CDS CCA 90 bp | CAGCCTCATATTCAGTCTTCAGTTTTTGAAGCTTCTCTGTATTTGTaGTCAAGTGTTCAACATACGTCTGGACACATTCAAACTTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: QPHIQSSVFEASLYL*SSVQHTSGHIQTSL Trigger: TAAAGAAGTTTGAATGTGTCCAGACGTATGTTGAACACTTGACCACAAATACAGAGAAGCTTCAAAAACTGAAGACTGAATATGAGGCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CCA 72 bp | CTGGGGCTCGCCAAGGGCGCAGAGGTGGCGGAGGCCTaGCGCAGGCCACCACCACCGCCACCGCGCCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: LGLAKGAEVAEA*RRPPPPPPRPR Trigger: GCGAGGGCGCGGTGGCGGTGGTGGTGGCCTGCGCCAGGCCTCCGCCACCTCTGCGCCCTTGGCGAGCCCCAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099278.9 ENSMUST00000156232.2 |
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| CDS CCA 72 bp | GAGCCTGCTGGAGCTGGCCCACCCTTTCGTAGTAGCTaGGGCTCGCCAAGGGCGCAGAGGTGGCGGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: EPAGAGPPFRSS*GSPRAQRWRRP Trigger: AGGCCTCCGCCACCTCTGCGCCCTTGGCGAGCCCCAGCTACTACGAAAGGGTGGGCCAGCTCCAGCAGGCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099278.9 ENSMUST00000156232.2 |
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| CDS CAA 72 bp | GCTCGCAAGGCCTGCATTCCATCTTTGCCCGCCATCTaGGCTCCTGGATTCGACAGTGCGGCCAGACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: ARKACIPSLPAI*APGFDSAARLS Trigger: AGAGAGTCTGGCCGCACTGTCGAATCCAGGAGCCAAGATGGCGGGCAAAGATGGAATGCAGGCCTTGCGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS TCA 72 bp | CTCTCCAGCCCACTTCTTTGCAGATGTACAGTGTTCTaGAGCTGCCATCATGGGGACCAGCGGGCCGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LSSPLLCRCTVF*SCHHGDQRAGS Trigger: AGAGCCGGCCCGCTGGTCCCCATGATGGCAGCTTCAGAACACTGTACATCTGCAAAGAAGTGGGCTGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS GCA 72 bp | TCTTGTCTTGGTTCAGTGTGGGCCGCTCGCAAGGCCTaGATTCCATCTTTGCCCGCCATCTTGGCTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SCLGSVWAARKA*IPSLPAILAPG Trigger: TCCAGGAGCCAAGATGGCGGGCAAAGATGGAATGCAGGCCTTGCGAGCGGCCCACACTGAACCAAGACAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CCA 72 bp | CTCGCAAGGCCTGCATTCCATCTTTGCCCGCCATCTTaGCTCCTGGATTCGACAGTGCGGCCAGACTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: LARPAFHLCPPS*LLDSTVRPDSL Trigger: TAGAGAGTCTGGCCGCACTGTCGAATCCAGGAGCCAAGATGGCGGGCAAAGATGGAATGCAGGCCTTGCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS GCA 72 bp | GTTCTGAGGGTACTAGATCCGCCTCTCTGTGTCCTGTaGCTGGGGCCGCAGCTATGCTTTCTTCCTTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VLRVLDPPLCVL*LGPQLCFLPCS Trigger: AGAGCAAGGAAGAAAGCATAGCTGCGGCCCCAGGCACAGGACACAGAGAGGCGGATCTAGTACCCTCAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CCA 72 bp | TATTCCGTGAAGAGCGAATCTTGTCTTGGTTCAGTGTaGGCCGCTCGCAAGGCCTGCATTCCATCTTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: YSVKSESCLGSV*AARKACIPSLP Trigger: GGGCAAAGATGGAATGCAGGCCTTGCGAGCGGCCCACACTGAACCAAGACAAGATTCGCTCTTCACGGAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CAA 90 bp | CTGAGGAAGCTTCCCAAGCAGAATGCTTCTCTCCAGCCCACTTCTTaGCAGATGTACAGTGTTCTGAAGCTGCCATCATGGGGACCAGCG | + |
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Preference number: 6 (lower is better) Translates to: LRKLPKQNASLQPTS*QMYSVLKLPSWGPA Trigger: CGCTGGTCCCCATGATGGCAGCTTCAGAACACTGTACATCTGCAAAGAAGTGGGCTGGAGAGAAGCATTCTGCTTGGGAAGCTTCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CAA 90 bp | GCCTCTCTGTGTCCTGTGCCTGGGGCCGCAGCTATGCTTTCTTCCTaGCTCTCATCTCCACAGCCACTTGAAACTTCTTGTTCCCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: ASLCPVPGAAAMLSS*LSSPQPLETSCSLV Trigger: TACAAGGGAACAAGAAGTTTCAAGTGGCTGTGGAGATGAGAGCAAGGAAGAAAGCATAGCTGCGGCCCCAGGCACAGGACACAGAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS GCA 72 bp | TGTCCCCGAGTTAATTCCTGCCTGCACTGCATCCTTTaGTCCGTCTTCGTCACTCATTCCCAGGCTATCCTT | + |
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Preference number: 6 (lower is better) Translates to: CPRVNSCLHCIL*SVFVTHSQAIL Trigger: AAGGATAGCCTGGGAATGAGTGACGAAGACGGAGCAAAGGATGCAGTGCAGGCAGGAATTAACTCGGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS GCA 72 bp | GTCCTGTGCCTGGGGCCGCAGCTATGCTTTCTTCCTTaGTCTCATCTCCACAGCCACTTGAAACTTCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: VLCLGPQLCFLP*SHLHSHLKLLV Trigger: AACAAGAAGTTTCAAGTGGCTGTGGAGATGAGAGCAAGGAAGAAAGCATAGCTGCGGCCCCAGGCACAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS GCA 72 bp | CCTCTTGACATAGCTGTCCCCGAGTTAATTCCTGCCTaGACTGCATCCTTTGCTCCGTCTTCGTCACTCATT | + |
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Preference number: 6 (lower is better) Translates to: PLDIAVPELIPA*TASFAPSSSLI Trigger: AATGAGTGACGAAGACGGAGCAAAGGATGCAGTGCAGGCAGGAATTAACTCGGGGACAGCTATGTCAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS TCA 72 bp | CCATCATGGGGACCAGCGGGCCGGCTCTTTCTTCCCTaGCTTCAATATGTTCTTGTGTCAGTATTTCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: PSWGPAGRLFLP*LQYVLVSVFLC Trigger: ACAGAGAAATACTGACACAAGAACATATTGAAGTCAGGGAAGAAAGAGCCGGCCCGCTGGTCCCCATGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS TCA 72 bp | GCTTTTGTTTCTTTCATGGCTGCTCCCAAGCTGAACTaGAACAGTTCTGAGGGTACTAGATCCGCCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: AFVSFMAAPKLN*NSSEGTRSASL Trigger: CAGAGAGGCGGATCTAGTACCCTCAGAACTGTTTCAGTTCAGCTTGGGAGCAGCCATGAAAGAAACAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS TCA 72 bp | GGTAGGCTTTTGTTTCTTTCATGGCTGCTCCCAAGCTaGACTGAAACAGTTCTGAGGGTACTAGATCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: GRLLFLSWLLPS*TETVLRVLDPP Trigger: AGGCGGATCTAGTACCCTCAGAACTGTTTCAGTTCAGCTTGGGAGCAGCCATGAAAGAAACAAAAGCCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CAA 90 bp | ACTCTTGCTGTGCTGTGTGCTGCTTCCTATCTCCAAGCAATGAGTTaGTTCTTCTGCAGACAATACATAGCTTGTGACTGGCGCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: TLAVLCAASYLQAMS*FFCRQYIACDWRLL Trigger: GAGAAGGCGCCAGTCACAAGCTATGTATTGTCTGCAGAAGAACAAACTCATTGCTTGGAGATAGGAAGCAGCACACAGCACAGCAAGAGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS TCA 72 bp | GCTGACATTTGGCGGCCCATAAAGATTGTTGCTGGTTaGTACAATCCTCTTGACATAGCTGTCCCCGAGTTA | + |
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Preference number: 6 (lower is better) Translates to: ADIWRPIKIVAG*YNPLDIAVPEL Trigger: TAACTCGGGGACAGCTATGTCAAGAGGATTGTATCAACCAGCAACAATCTTTATGGGCCGCCAAATGTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099278.9 ENSMUST00000156232.2 |
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| CDS CAA 72 bp | CCTTCACTAGATGAAAAACTAGCTTCCGAGGCGATTTaGTGGGCTGTCTTTGTTGTGAACATGCTGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: PSLDEKLASEAI*WAVFVVNMLPP Trigger: TGGTGGCAGCATGTTCACAACAAAGACAGCCCACAAAATCGCCTCGGAAGCTAGTTTTTCATCTAGTGAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CAA 90 bp | AGCTGTCCCCGAGTTAATTCCTGCCTGCACTGCATCCTTCAGTTTTaGAAGCTTCTCTGTATTTGTGGTCAAGTGTTCAACATACGTCTG | + |
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Preference number: 6 (lower is better) Translates to: SCPRVNSCLHCILQF*KLLCICGQVFNIRL Trigger: CAGACGTATGTTGAACACTTGACCACAAATACAGAGAAGCTTCAAAAACTGAAGGATGCAGTGCAGGCAGGAATTAACTCGGGGACAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156232.2 |
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| CDS TCA 72 bp | AATCAGGAAAGCTTTGGGTCTGTAAAACATATTCCGTaGAGAGCGAATCTTGTCTTGGTTCAGTGTGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: NQESFGSVKHIP*RANLVLVQCGP Trigger: CGGCCCACACTGAACCAAGACAAGATTCGCTCTTCACGGAATATGTTTTACAGACCCAAAGCTTTCCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CCA 72 bp | AGTTTGTTCTTCTGCAGACAATACATAGCTTGTGACTaGCGCCTTCTCACCAGTCTGAAGAGATGTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SLFFCRQYIACD*RLLTSLKRCLS Trigger: GGAAAGACATCTCTTCAGACTGGTGAGAAGGCGCCAGTCACAAGCTATGTATTGTCTGCAGAAGAACAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CAA 72 bp | GTGCTGTGTGCTGCTTCCTATCTCCAAGCAATGAGTTaGTTCTTCTGCAGACAATACATAGCTTGTGACTGG | + |
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Preference number: 6 (lower is better) Translates to: VLCAASYLQAMS*FFCRQYIACDW Trigger: CCAGTCACAAGCTATGTATTGTCTGCAGAAGAACAAACTCATTGCTTGGAGATAGGAAGCAGCACACAGCAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CAA 72 bp | CCACTTGAAACTTCTTGTTCCCTTGTAAGAACACTGTaGAGCCGCAGAGCGGGTTTTGCTTCCTTTATTCCA | + |
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Preference number: 6 (lower is better) Translates to: PLETSCSLVRTL*SRRAGFASFIP Trigger: TGGAATAAAGGAAGCAAAACCCGCTCTGCGGCTCAACAGTGTTCTTACAAGGGAACAAGAAGTTTCAAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CAA 90 bp | TCTCCACAGCCACTTGAAACTTCTTGTTCCCTTGTAAGAACACTGTaGAGCCGCAGAGCGGGTTTTGCTTCCTTTATTCCATTATTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SPQPLETSCSLVRTL*SRRAGFASFIPLLS Trigger: TGACAATAATGGAATAAAGGAAGCAAAACCCGCTCTGCGGCTCAACAGTGTTCTTACAAGGGAACAAGAAGTTTCAAGTGGCTGTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CAA 90 bp | AAAGGACTTCCTTCACTAGATGAAAAACTAGCTTCCGAGGCGATTTaGTGGGCTGTCTTTGTTGTGAACATGCTGCCACCAATATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: KGLPSLDEKLASEAI*WAVFVVNMLPPISR Trigger: TCTGGATATTGGTGGCAGCATGTTCACAACAAAGACAGCCCACAAAATCGCCTCGGAAGCTAGTTTTTCATCTAGTGAAGGAAGTCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CCA 72 bp | TCACTAGATGAAAAACTAGCTTCCGAGGCGATTTTGTaGGCTGTCTTTGTTGTGAACATGCTGCCACCAATA | + |
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Preference number: 6 (lower is better) Translates to: SLDEKLASEAIL*AVFVVNMLPPI Trigger: TATTGGTGGCAGCATGTTCACAACAAAGACAGCCCACAAAATCGCCTCGGAAGCTAGTTTTTCATCTAGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS GCA 72 bp | TGCCTTCAGATAAATTACTCTTGCTGTGCTGTGTGCTaGTTCCTATCTCCAAGCAATGAGTTTGTTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: CLQINYSCCAVC*FLSPSNEFVLL Trigger: CAGAAGAACAAACTCATTGCTTGGAGATAGGAAGCAGCACACAGCACAGCAAGAGTAATTTATCTGAAGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CAA 90 bp | TTCCTGCCTGCACTGCATCCTTCAGTTTTTGAAGCTTCTCTGTATTaGTGGTCAAGTGTTCAACATACGTCTGGACACATTCAAACTTCT | + |
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Preference number: 6 (lower is better) Translates to: FLPALHPSVFEASLY*WSSVQHTSGHIQTS Trigger: AGAAGTTTGAATGTGTCCAGACGTATGTTGAACACTTGACCACAAATACAGAGAAGCTTCAAAAACTGAAGGATGCAGTGCAGGCAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156232.2 |
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| CDS TCA 72 bp | GAGTTAATTCCTGCCTGCACTGCATCCTTCAGTTTTTaGAGCTTCTCTGTATTTGTGGTCAAGTGTTCAACA | + |
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Preference number: 6 (lower is better) Translates to: ELIPACTASFSF*SFSVFVVKCST Trigger: TGTTGAACACTTGACCACAAATACAGAGAAGCTTCAAAAACTGAAGGATGCAGTGCAGGCAGGAATTAACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156232.2 |
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| CDS GCA 72 bp | TTCTGCCTTCAGATAAATTACTCTTGCTGTGCTGTGTaGTGCTTCCTATCTCCAAGCAATGAGTTTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FCLQINYSCCAV*CFLSPSNEFVL Trigger: AAGAACAAACTCATTGCTTGGAGATAGGAAGCAGCACACAGCACAGCAAGAGTAATTTATCTGAAGGCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS TCA 72 bp | TGTTCCTTCATACATTGCCCTCGTGTCTTCAATAAGTaGCAATCTGGTACTTTTTCAGGTTGTCTTGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: CSFIHCPRVFNK*QSGTFSGCLGE Trigger: TTCACCAAGACAACCTGAAAAAGTACCAGATTGTCACTTATTGAAGACACGAGGGCAATGTATGAAGGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CCA 72 bp | CTGCATCCTTCAGTTTTTGAAGCTTCTCTGTATTTGTaGTCAAGTGTTCAACATACGTCTGGACACATTCAA | + |
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Preference number: 6 (lower is better) Translates to: LHPSVFEASLYL*SSVQHTSGHIQ Trigger: TTGAATGTGTCCAGACGTATGTTGAACACTTGACCACAAATACAGAGAAGCTTCAAAAACTGAAGGATGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156232.2 |
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| CDS CAA 90 bp | CTTCAGCCTCATATTCAGTCTTCAGTTTTTGAAGCTTCTCTGTATTaGTGGTCAAGTGTTCAACATACGTCTGGACACATTCAAACTTCT | + |
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Preference number: 6 (lower is better) Translates to: LQPHIQSSVFEASLY*WSSVQHTSGHIQTS Trigger: AGAAGTTTGAATGTGTCCAGACGTATGTTGAACACTTGACCACAAATACAGAGAAGCTTCAAAAACTGAAGACTGAATATGAGGCTGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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| CDS CCA 72 bp | GAATGTGGGTCAGAGATTGAAAAGTTCTTTGTGGGTTaGTTAGATTTCAGCTCTGTACTGAAATCTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: ECGSEIEKFFVG*LDFSSVLKSSM Trigger: CATTGAAGATTTCAGTACAGAGCTGAAATCTAACCAACCCACAAAGAACTTTTCAATCTCTGACCCACATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099278.9 ENSMUST00000156232.2 |
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| CDS CCA 72 bp | ATTCAGTCTTCAGTTTTTGAAGCTTCTCTGTATTTGTaGTCAAGTGTTCAACATACGTCTGGACACATTCAA | + |
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Preference number: 6 (lower is better) Translates to: IQSSVFEASLYL*SSVQHTSGHIQ Trigger: TTGAATGTGTCCAGACGTATGTTGAACACTTGACCACAAATACAGAGAAGCTTCAAAAACTGAAGACTGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099278.9 |
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