Pregenerated sensors for KISS1R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035773Ensembl transcript IDs: ENSMUST00000045529.3, ENSMUST00000219745.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATTAACCACCCACCAGCGCAAGCAGCCTGGGATGCTTTACCCCACAGGCAGGACGGCGGACACAGCTGCTaGCCCCACCCAGATGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: INHPPAQAAWDALPHRQDGGHSC*PHPDAE Trigger: CTCAGCATCTGGGTGGGGTCAGCAGCTGTGTCCGCC...GTCCTGCCTGTGGGGTAAAGCATCCCAGGCTGCTTGCGCTGGTGGGTGGTTAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS-3UTR CCA 90 bp | ACAACATCCACAGCAAAAACCAGGGCATACGGGTGCCAAATGGAAGAAAAGGCCGGCATCCAGGGGCCTTaGCGCAGAGCCTGGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: TTSTAKTRAYGCQMEEKAGIQGP*RRAWVI Trigger: GATGACCCAGGCTCTGCGCCAAGGCCCCTGGATGCC...GGCCTTTTCTTCCATTTGGCACCCGTATGCCCTGGTTTTTGCTGTGGATGTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS-3UTR TCA 90 bp | GAATTATCACAACATCCACAGCAAAAACCAGGGCATACGGGTGCCAAATGGAAGGGTCATCCGAGGCGTTaGCACCGCAGCCTGGGCATC | + |
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Preference number: 4 (lower is better) Translates to: ELSQHPQQKPGHTGAKWKGHPRR*HRSLGI Trigger: GATGCCCAGGCTGCGGTGTCAACGCCTCGGATGACC...CTTCCATTTGGCACCCGTATGCCCTGGTTTTTGCTGTGGATGTTGTGATAATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS-3UTR CCA 90 bp | AATTATCACAACATCCACAGCAAAAACCAGGGCATACGGGTGCCAAATGGAAGAGCTCCAGGGCGCGGCTaGGAAACGCCTCGCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: NYHNIHSKNQGIRVPNGRAPGRG*ETPRCS Trigger: ACTGCAGCGAGGCGTTTCCCAGCCGCGCCCTGGAGC...TCTTCCATTTGGCACCCGTATGCCCTGGTTTTTGCTGTGGATGTTGTGATAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS-3UTR CCA 90 bp | GAATTATCACAACATCCACAGCAAAAACCAGGGCATACGGGTGCCAAATGGAAGCGTAGCAGGCGCAGGTaGCGAGCAGCGGCAGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: ELSQHPQQKPGHTGAKWKRSRRR*RAAAAD Trigger: ATCTGCTGCCGCTGCTCGCCACCTGCGCCTGCTACG...CTTCCATTTGGCACCCGTATGCCCTGGTTTTTGCTGTGGATGTTGTGATAATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS-3UTR CCA 90 bp | AAACCAGGGCATACGGGTGCCAAATGGAAGAAAAGGCCATTTACAAAGATTAACCCAGGTGGCGCAGCATaGCGCCGTAGCAGGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KPGHTGAKWKKRPFTKINPGGAA*RRSRRR Trigger: CCTGCGCCTGCTACGGCGCCATGCTGCGCCACCTGG...GTTAATCTTTGTAAATGGCCTTTTCTTCCATTTGGCACCCGTATGCCCTGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS-3UTR GCA 90 bp | TTTAGTTTAGTAGTTCATTGCTTGCCCCATAAACACAAACTCCTGGTTCGGTTCCCTCGCTGCAGTAGGTaGGAGGCCCTGGCGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: FSLVVHCLPHKHKLLVRFPRCSR*EALATG Trigger: GCCTGTCGCCAGGGCCTCGCACCTACTGCAGCGAGG...GAACCGAACCAGGAGTTTGTGTTTATGGGGCAAGCAATGAACTACTAAACTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS-3UTR GCA 90 bp | AAACCAGGGCATACGGGTGCCAAATGGAAGAAAAGGCCATTTACAAAGATTAACGCTAGCAGCTGTCCCTaGAGGGCGCCGTCAGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: KPGHTGAKWKKRPFTKINASSCP*RAPSVG Trigger: ACCCACTGACGGCGCCCTGCAGGGACAGCTGCTAGC...GTTAATCTTTGTAAATGGCCTTTTCTTCCATTTGGCACCCGTATGCCCTGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS-3UTR GCA 90 bp | TTTAGTTTAGTAGTTCATTGCTTGCCCCATAAACACAAACTCCTGGTTCGGTTCCTGATCCGCACAGGGTaGGCAGCACGGCTGTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: FSLVVHCLPHKHKLLVRFLIRTG*AARLCG Trigger: GCCGCACAGCCGTGCTGCGCACCCTGTGCGGATCAG...GAACCGAACCAGGAGTTTGTGTTTATGGGGCAAGCAATGAACTACTAAACTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS-3UTR CCA 90 bp | AATTATCACAACATCCACAGCAAAAACCAGGGCATACGGGTGCCAAATGGAAGACCTTGGCGCAGAGCCTaGGTCATCCGAGGCGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: NYHNIHSKNQGIRVPNGRPWRRA*VIRGVD Trigger: GTCAACGCCTCGGATGACCCAGGCTCTGCGCCAAGG...TCTTCCATTTGGCACCCGTATGCCCTGGTTTTTGCTGTGGATGTTGTGATAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS-3UTR TCA 90 bp | GAATTATCACAACATCCACAGCAAAAACCAGGGCATACGGGTGCCAAATGGAAGCATAGAGCAGCGGATTaGGCGCCGAGTTGCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: ELSQHPQQKPGHTGAKWKHRAAD*APSCCR Trigger: CCTACAGCAACTCGGCGCTCAATCCGCTGCTCTATG...CTTCCATTTGGCACCCGTATGCCCTGGTTTTTGCTGTGGATGTTGTGATAATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS-3UTR TCA 90 bp | TTTAGTTTAGTAGTTCATTGCTTGCCCCATAAACACAAACTCCTGGTTCGGTTCAGTGAGCCCAGATCTTaGCCGCGTAGGCGGCATAGC | + |
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Preference number: 4 (lower is better) Translates to: FSLVVHCLPHKHKLLVRFSEPRS*PRRRHS Trigger: GCTATGCCGCCTACGCGGTCAAGATCTGGGCTCACT...GAACCGAACCAGGAGTTTGTGTTTATGGGGCAAGCAATGAACTACTAAACTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS-3UTR CCA 90 bp | TCAAAGATTACAGAGAATTATCACAACATCCACAGCAAAAACCAGGGCATACGGTCATGGCCGTCAGAGTaGCACATGTGGCTTGCACCG | + |
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Preference number: 4 (lower is better) Translates to: SKITENYHNIHSKNQGIRSWPSE*HMWLAP Trigger: CGGTGCAAGCCACATGTGCCACTCTGACGGCCATGA...CCGTATGCCCTGGTTTTTGCTGTGGATGTTGTGATAATTCTCTGTAATCTTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS-3UTR CCA 90 bp | TTTAGTTTAGTAGTTCATTGCTTGCCCCATAAACACAAACTCCTGGTTCGGTTCTCAGAGTGGCACATGTaGCTTGCACCGAGACCTGCT | + |
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Preference number: 4 (lower is better) Translates to: FSLVVHCLPHKHKLLVRFSEWHM*LAPRPA Trigger: AGCAGGTCTCGGTGCAAGCCACATGTGCCACTCTGA...GAACCGAACCAGGAGTTTGTGTTTATGGGGCAAGCAATGAACTACTAAACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS-3UTR TCA 90 bp | TTTAGTTTAGTAGTTCATTGCTTGCCCCATAAACACAAACTCCTGGTTCGGTTCAACGTAGATGACCAATaGGTTTCCGACCAGCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: FSLVVHCLPHKHKLLVRFNVDDQ*VSDQPK Trigger: CTTGGGCTGGTCGGAAACTCATTGGTCATCTACGTT...GAACCGAACCAGGAGTTTGTGTTTATGGGGCAAGCAATGAACTACTAAACTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS-3UTR GCA 90 bp | TCAAAGATTACAGAGAATTATCACAACATCCACAGCAAAAACCAGGGCATACGGAAGTTGGTAACTGTCTaGATGTGCTTGTGGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SKITENYHNIHSKNQGIRKLVTV*MCLWRQ Trigger: CTGCCGCCACAAGCACATGCAGACAGTTACCAACTT...CCGTATGCCCTGGTTTTTGCTGTGGATGTTGTGATAATTCTCTGTAATCTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS CCA 90 bp | CAGGGCGCGGCTGGGAAACGCCTCGCTGCAGTAGGTGCGAGGCCCTaGCGACAGGCGGTGCAGGGCCAGCACCGGGGCGGACACAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: QGAAGKRLAAVGARP*RQAVQGQHRGGHSC Trigger: GCAGCTGTGTCCGCCCCGGTGCTGGCCCTGCACCGCCTGTCGCCAGGGCCTCGCACCTACTGCAGCGAGGCGTTTCCCAGCCGCGCCCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS GCA 90 bp | AGAGCGCGAAGGCGCGCTCCAGGGCGCGGCTGGGAAACGCCTCGCTaGAGTAGGTGCGAGGCCCTGGCGACAGGCGGTGCAGGGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RARRRAPGRGWETPR*SRCEALATGGAGPA Trigger: TGCTGGCCCTGCACCGCCTGTCGCCAGGGCCTCGCACCTACTGCAGCGAGGCGTTTCCCAGCCGCGCCCTGGAGCGCGCCTTCGCGCTCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS GCA 90 bp | ACCTTGGTGCGCACTGCTCCGGCGCGCTGTGCTAGCAGCTGTCCCTaGAGGGCGCCGTCAGTGGGTGCGGGGCGTACAGCCGCACGGCCC | + |
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Preference number: 5 (lower is better) Translates to: TLVRTAPARCASSCP*RAPSVGAGRTAARP Trigger: GGGCCGTGCGGCTGTACGCCCCGCACCCACTGACGGCGCCCTGCAGGGACAGCTGCTAGCACAGCGCGCCGGAGCAGTGCGCACCAAGGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS TCA 90 bp | GAGCGCAGGGCGAGCGCACCACAGGGTTCCCAGGCTCCGGGCTCCTaGTCCGCACAGGGTGCGCAGCACGGCTGTGCGGCACAGTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: ERRASAPQGSQAPGS*SAQGAQHGCAAQCE Trigger: CTCACACTGTGCCGCACAGCCGTGCTGCGCACCCTGTGCGGATCAGGAGCCCGGAGCCTGGGAACCCTGTGGTGCGCTCGCCCTGCGCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS GCA 90 bp | CGGCGAAGAGCAGGACGACAGCGGCCACCAGCCGGGAGACCTTGGTaGGCACTGCTCCGGCGCGCTGTGCTAGCAGCTGTCCCTGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: RRRAGRQRPPAGRPW*ALLRRAVLAAVPAG Trigger: CCCTGCAGGGACAGCTGCTAGCACAGCGCGCCGGAGCAGTGCGCACCAAGGTCTCCCGGCTGGTGGCCGCTGTCGTCCTGCTCTTCGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS GCA 90 bp | CGGCGAAGAGCAGGACGACAGCGGCCACCAGCCGGGAGACCTTGGTaGGCACTGCTCCGGCGCGCTGTGCTAGCAGCTGTCCCCACCCAG | + |
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Preference number: 5 (lower is better) Translates to: RRRAGRQRPPAGRPW*ALLRRAVLAAVPTQ Trigger: CTGGGTGGGGACAGCTGCTAGCACAGCGCGCCGGAGCAGTGCGCACCAAGGTCTCCCGGCTGGTGGCCGCTGTCGTCCTGCTCTTCGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219745.2 |
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| CDS CCA 90 bp | GAGCCAGCAGGTTGTAGAGCGCGAAGGCGCGCTCCAGGGCGCGGCTaGGAAACGCCTCGCTGCAGTAGGTGCGAGGCCCTGGCGACAGGC | + |
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Preference number: 5 (lower is better) Translates to: EPAGCRARRRAPGRG*ETPRCSRCEALATG Trigger: GCCTGTCGCCAGGGCCTCGCACCTACTGCAGCGAGGCGTTTCCCAGCCGCGCCCTGGAGCGCGCCTTCGCGCTCTACAACCTGCTGGCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS CCA 90 bp | CAGTGGGTGCGGGGCGTACAGCCGCACGGCCCAGGTGGCGCAGCATaGCGCCGTAGCAGGCGCAGGTGGCGAGCAGCGGCAGCAGATATA | + |
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Preference number: 5 (lower is better) Translates to: QWVRGVQPHGPGGAA*RRSRRRWRAAAADI Trigger: TATATCTGCTGCCGCTGCTCGCCACCTGCGCCTGCTACGGCGCCATGCTGCGCCACCTGGGCCGTGCGGCTGTACGCCCCGCACCCACTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS CCA 90 bp | AGGCGGCGAAGAGCAGGACGACAGCGGCCACCAGCCGGGAGACCTTaGTGCGCACTGCTCCGGCGCGCTGTGCTAGCAGCTGTCCCCACC | + |
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Preference number: 5 (lower is better) Translates to: RRRRAGRQRPPAGRP*CALLRRAVLAAVPT Trigger: GGTGGGGACAGCTGCTAGCACAGCGCGCCGGAGCAGTGCGCACCAAGGTCTCCCGGCTGGTGGCCGCTGTCGTCCTGCTCTTCGCCGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219745.2 |
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| CDS TCA 90 bp | CTCCTGATCCGCACAGGGTGCGCAGCACGGCTGTGCGGCACAGTGTaGGTTGCAGCTCGGTCCGAGTGCGCTGACGTGTGGGGCCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: LLIRTGCAARLCGTV*VAARSECADVWGRR Trigger: GCGCCGGCCCCACACGTCAGCGCACTCGGACCGAGCTGCAACTCACACTGTGCCGCACAGCCGTGCTGCGCACCCTGTGCGGATCAGGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS CCA 90 bp | AGGCGGCGAAGAGCAGGACGACAGCGGCCACCAGCCGGGAGACCTTaGTGCGCACTGCTCCGGCGCGCTGTGCTAGCAGCTGTCCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: RRRRAGRQRPPAGRP*CALLRRAVLAAVPA Trigger: TGCAGGGACAGCTGCTAGCACAGCGCGCCGGAGCAGTGCGCACCAAGGTCTCCCGGCTGGTGGCCGCTGTCGTCCTGCTCTTCGCCGCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS CCA 90 bp | CCGCACGGCCCAGGTGGCGCAGCATGGCGCCGTAGCAGGCGCAGGTaGCGAGCAGCGGCAGCAGATATAGAGCCAGCAGGTTGTAGAGCG | + |
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Preference number: 5 (lower is better) Translates to: PHGPGGAAWRRSRRR*RAAAADIEPAGCRA Trigger: CGCTCTACAACCTGCTGGCTCTATATCTGCTGCCGCTGCTCGCCACCTGCGCCTGCTACGGCGCCATGCTGCGCCACCTGGGCCGTGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS TCA 90 bp | CAGATGCTGAGGCTGACAGCCAGGGCCAGGCGCGGAGTGCGGCGGTaGAGTGCACGCAGCGGGAACACAGTCACATACCAGCGGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: QMLRLTARARRGVRR*SARSGNTVTYQRST Trigger: TGTGGACCGCTGGTATGTGACTGTGTTCCCGCTGCGTGCACTTCACCGCCGCACTCCGCGCCTGGCCCTGGCTGTCAGCCTCAGCATCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS GCA 90 bp | GCTGAGGCTGACAGCCAGGGCCAGGCGCGGAGTGCGGCGGTGAAGTaGACGCAGCGGGAACACAGTCACATACCAGCGGTCCACACTCAT | + |
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Preference number: 5 (lower is better) Translates to: AEADSQGQARSAAVK*TQREHSHIPAVHTH Trigger: ATGAGTGTGGACCGCTGGTATGTGACTGTGTTCCCGCTGCGTGCACTTCACCGCCGCACTCCGCGCCTGGCCCTGGCTGTCAGCCTCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS TCA 90 bp | AGAGCCTGGGTCATCCGAGGCGTTGACACCGCAGCCTGGGCATCCTaGAGCGTTGGACGGAGCCCACCAGGTCACATTGGGAGCCAATGT | + |
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Preference number: 5 (lower is better) Translates to: RAWVIRGVDTAAWAS*SVGRSPPGHIGSQC Trigger: ACATTGGCTCCCAATGTGACCTGGTGGGCTCCGTCCAACGCTTCAGGATGCCCAGGCTGCGGTGTCAACGCCTCGGATGACCCAGGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS TCA 90 bp | AACTGTCTGCATGTGCTTGTGGCGGCAGATAACGTAGATGACCAATaGGTTTCCGACCAGCCCAAGCAACATGAGTGTAGCGAAAAACAG | + |
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Preference number: 5 (lower is better) Translates to: NCLHVLVAADNVDDQ*VSDQPKQHECSEKQ Trigger: CTGTTTTTCGCTACACTCATGTTGCTTGGGCTGGTCGGAAACTCATTGGTCATCTACGTTATCTGCCGCCACAAGCACATGCAGACAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS-3UTR CAA 90 bp | TCAAAGATTACAGAGAATTATCACAACATCCACAGCAAAAACCAGGGCATACGGAGTGGCACATGTGGCTaGCACCGAGACCTGCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: SKITENYHNIHSKNQGIRSGTCG*HRDLLD Trigger: ATCCAGCAGGTCTCGGTGCAAGCCACATGTGCCACT...CCGTATGCCCTGGTTTTTGCTGTGGATGTTGTGATAATTCTCTGTAATCTTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS GCA 72 bp | AGGCGCGCTCCAGGGCGCGGCTGGGAAACGCCTCGCTaGAGTAGGTGCGAGGCCCTGGCGACAGGCGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: RRAPGRGWETPR*SRCEALATGGA Trigger: TGCACCGCCTGTCGCCAGGGCCTCGCACCTACTGCAGCGAGGCGTTTCCCAGCCGCGCCCTGGAGCGCGCCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS GCA 72 bp | CGCACTGCTCCGGCGCGCTGTGCTAGCAGCTGTCCCTaGAGGGCGCCGTCAGTGGGTGCGGGGCGTACAGCC | + |
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Preference number: 6 (lower is better) Translates to: RTAPARCASSCP*RAPSVGAGRTA Trigger: GGCTGTACGCCCCGCACCCACTGACGGCGCCCTGCAGGGACAGCTGCTAGCACAGCGCGCCGGAGCAGTGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS GCA 72 bp | TCCGAGTGCGCTGACGTGTGGGGCCGGCGCTGGCGTTaGCGGCAGCAGGGGCACACGCGGCAGAAGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SECADVWGRRWR*RQQGHTRQKAC Trigger: ACAGGCCTTCTGCCGCGTGTGCCCCTGCTGCCGGCAACGCCAGCGCCGGCCCCACACGTCAGCGCACTCGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS CCA 72 bp | GCTGGGAAACGCCTCGCTGCAGTAGGTGCGAGGCCCTaGCGACAGGCGGTGCAGGGCCAGCACCGGGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: AGKRLAAVGARP*RQAVQGQHRGG Trigger: TCCGCCCCGGTGCTGGCCCTGCACCGCCTGTCGCCAGGGCCTCGCACCTACTGCAGCGAGGCGTTTCCCAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS TCA 72 bp | GCGAGCGCACCACAGGGTTCCCAGGCTCCGGGCTCCTaGTCCGCACAGGGTGCGCAGCACGGCTGTGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: ASAPQGSQAPGS*SAQGAQHGCAA Trigger: TGCCGCACAGCCGTGCTGCGCACCCTGTGCGGATCAGGAGCCCGGAGCCTGGGAACCCTGTGGTGCGCTCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS CAA 90 bp | CAGGCGGCGAAGAGCAGGACGACAGCGGCCACCAGCCGGGAGACCTaGGTGCGCACTGCTCCGGCGCGCTGTGCTAGCAGCTGTCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: QAAKSRTTAATSRET*VRTAPARCASSCPC Trigger: GCAGGGACAGCTGCTAGCACAGCGCGCCGGAGCAGTGCGCACCAAGGTCTCCCGGCTGGTGGCCGCTGTCGTCCTGCTCTTCGCCGCCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS CAA 90 bp | CAGGCGGCGAAGAGCAGGACGACAGCGGCCACCAGCCGGGAGACCTaGGTGCGCACTGCTCCGGCGCGCTGTGCTAGCAGCTGTCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: QAAKSRTTAATSRET*VRTAPARCASSCPH Trigger: GTGGGGACAGCTGCTAGCACAGCGCGCCGGAGCAGTGCGCACCAAGGTCTCCCGGCTGGTGGCCGCTGTCGTCCTGCTCTTCGCCGCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219745.2 |
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| CDS GCA 72 bp | GCAGGACGACAGCGGCCACCAGCCGGGAGACCTTGGTaGGCACTGCTCCGGCGCGCTGTGCTAGCAGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: AGRQRPPAGRPW*ALLRRAVLAAV Trigger: GACAGCTGCTAGCACAGCGCGCCGGAGCAGTGCGCACCAAGGTCTCCCGGCTGGTGGCCGCTGTCGTCCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS CCA 72 bp | GGTTGTAGAGCGCGAAGGCGCGCTCCAGGGCGCGGCTaGGAAACGCCTCGCTGCAGTAGGTGCGAGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: GCRARRRAPGRG*ETPRCSRCEAL Trigger: CAGGGCCTCGCACCTACTGCAGCGAGGCGTTTCCCAGCCGCGCCCTGGAGCGCGCCTTCGCGCTCTACAACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS CCA 72 bp | AGAGCAGGACGACAGCGGCCACCAGCCGGGAGACCTTaGTGCGCACTGCTCCGGCGCGCTGTGCTAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RAGRQRPPAGRP*CALLRRAVLAA Trigger: AGCTGCTAGCACAGCGCGCCGGAGCAGTGCGCACCAAGGTCTCCCGGCTGGTGGCCGCTGTCGTCCTGCTCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS CAA 72 bp | AAGAGCAGGACGACAGCGGCCACCAGCCGGGAGACCTaGGTGCGCACTGCTCCGGCGCGCTGTGCTAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: KSRTTAATSRET*VRTAPARCASS Trigger: GCTGCTAGCACAGCGCGCCGGAGCAGTGCGCACCAAGGTCTCCCGGCTGGTGGCCGCTGTCGTCCTGCTCTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS CAA 90 bp | CAGGCATCCAGGGGCCTTGGCGCAGAGCCTGGGTCATCCGAGGCGTaGACACCGCAGCCTGGGCATCCTGAAGCGTTGGACGGAGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: QASRGLGAEPGSSEA*TPQPGHPEALDGAH Trigger: GTGGGCTCCGTCCAACGCTTCAGGATGCCCAGGCTGCGGTGTCAACGCCTCGGATGACCCAGGCTCTGCGCCAAGGCCCCTGGATGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS TCA 72 bp | CGCACAGGGTGCGCAGCACGGCTGTGCGGCACAGTGTaGGTTGCAGCTCGGTCCGAGTGCGCTGACGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: RTGCAARLCGTV*VAARSECADVW Trigger: CCACACGTCAGCGCACTCGGACCGAGCTGCAACTCACACTGTGCCGCACAGCCGTGCTGCGCACCCTGTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS CCA 72 bp | AACCAGCCAGGCATCCAGGGGCCTTGGCGCAGAGCCTaGGTCATCCGAGGCGTTGACACCGCAGCCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: NQPGIQGPWRRA*VIRGVDTAAWA Trigger: TGCCCAGGCTGCGGTGTCAACGCCTCGGATGACCCAGGCTCTGCGCCAAGGCCCCTGGATGCCTGGCTGGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS CCA 72 bp | CCAGGTGGCGCAGCATGGCGCCGTAGCAGGCGCAGGTaGCGAGCAGCGGCAGCAGATATAGAGCCAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PGGAAWRRSRRR*RAAAADIEPAG Trigger: ACCTGCTGGCTCTATATCTGCTGCCGCTGCTCGCCACCTGCGCCTGCTACGGCGCCATGCTGCGCCACCTGG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045529.3 |
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| CDS TCA 72 bp | AGGCTGACAGCCAGGGCCAGGCGCGGAGTGCGGCGGTaGAGTGCACGCAGCGGGAACACAGTCACATACCAG | + |
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Preference number: 6 (lower is better) Translates to: RLTARARRGVRR*SARSGNTVTYQ Trigger: CTGGTATGTGACTGTGTTCCCGCTGCGTGCACTTCACCGCCGCACTCCGCGCCTGGCCCTGGCTGTCAGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS CAA 72 bp | AGGGGCCTTGGCGCAGAGCCTGGGTCATCCGAGGCGTaGACACCGCAGCCTGGGCATCCTGAAGCGTTGGAC | + |
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Preference number: 6 (lower is better) Translates to: RGLGAEPGSSEA*TPQPGHPEALD Trigger: GTCCAACGCTTCAGGATGCCCAGGCTGCGGTGTCAACGCCTCGGATGACCCAGGCTCTGCGCCAAGGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS CAA 90 bp | GGGTCATCCGAGGCGTTGACACCGCAGCCTGGGCATCCTGAAGCGTaGGACGGAGCCCACCAGGTCACATTGGGAGCCAATGTCGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: GSSEALTPQPGHPEA*DGAHQVTLGANVAS Trigger: CGAGGCGACATTGGCTCCCAATGTGACCTGGTGGGCTCCGTCCAACGCTTCAGGATGCCCAGGCTGCGGTGTCAACGCCTCGGATGACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS TCA 72 bp | GTCATCCGAGGCGTTGACACCGCAGCCTGGGCATCCTaGAGCGTTGGACGGAGCCCACCAGGTCACATTGGG | + |
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Preference number: 6 (lower is better) Translates to: VIRGVDTAAWAS*SVGRSPPGHIG Trigger: CCCAATGTGACCTGGTGGGCTCCGTCCAACGCTTCAGGATGCCCAGGCTGCGGTGTCAACGCCTCGGATGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS CAA 72 bp | GAGGCGTTGACACCGCAGCCTGGGCATCCTGAAGCGTaGGACGGAGCCCACCAGGTCACATTGGGAGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: EALTPQPGHPEA*DGAHQVTLGAN Trigger: ATTGGCTCCCAATGTGACCTGGTGGGCTCCGTCCAACGCTTCAGGATGCCCAGGCTGCGGTGTCAACGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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| CDS CCA 72 bp | TCACATACCAGCGGTCCACACTCATGGCCGTCAGAGTaGCACATGTGGCTTGCACCGAGACCTGCTGGATGT | + |
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Preference number: 6 (lower is better) Translates to: SHTSGPHSWPSE*HMWLAPRPAGC Trigger: ACATCCAGCAGGTCTCGGTGCAAGCCACATGTGCCACTCTGACGGCCATGAGTGTGGACCGCTGGTATGTGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045529.3 ENSMUST00000219745.2 |
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