Pregenerated sensors for KISS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000116158Ensembl transcript IDs: ENSMUST00000007433.5, ENSMUST00000178033.5
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTCAACAGAACGGGACATTCCTTAACTAGTAGTTTAAAAAGCACCGACTTTGGCAGTCTAGAAGCTCCCTaGCTTGGCCTCTACAATCCA | + |
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Preference number: 2 (lower is better) Translates to: FNRTGHSLTSSLKSTDFGSLEAP*LGLYNP Trigger: TGGATTGTAGAGGCCAAGGCAGGGAGCTTCTAGACT...GCCAAAGTCGGTGCTTTTTAAACTACTAGTTAAGGAATGTCCCGTTCTGTTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007433.5 |
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| 3UTR-3UTR CAA 90 bp | TCAGTGGCCGAGTTTCTCCAGCCCCTTGATTTTCAACAGAACGGGACATTCCTTGGCACCGAGGACATCTaGAAATCAGAAAAGAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: SVAEFLQPLDFQQNGTFLGTEDI*KSEKRQ Trigger: TTGCCTCTTTTCTGATTTCAAGATGTCCTCGGTGCC...AAGGAATGTCCCGTTCTGTTGAAAATCAAGGGGCTGGAGAAACTCGGCCACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007433.5 |
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| 3UTR-3UTR CAA 90 bp | AAGCACCGACTTTGGCACCGAGGACATCTTGAAATCAGAAAAGAGGCAACTGAGGCAGCATTGCTTTTATaGCACAAGTCTAGAAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: KHRLWHRGHLEIRKEATEAALLL*HKSRSS Trigger: GGAGCTTCTAGACTTGTGCAATAAAAGCAATGCTGC...CTCAGTTGCCTCTTTTCTGATTTCAAGATGTCCTCGGTGCCAAAGTCGGTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007433.5 |
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| 3UTR-3UTR CAA 90 bp | ATTTTCAACAGAACGGGACATTCCTTAACTAGTAGTTTAAAAAGCACCGACTTTTGTAAGACGGCAGCATaGCTTTTATTGCACAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: IFNRTGHSLTSSLKSTDFCKTAA*LLLHKS Trigger: AGACTTGTGCAATAAAAGCAATGCTGCCGTCTTACA...AAAGTCGGTGCTTTTTAAACTACTAGTTAAGGAATGTCCCGTTCTGTTGAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000007433.5 |
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| CDS-3UTR GCA 90 bp | ACAAGTCTAGAAGCTCCCTGCCTTGGCCTCTACAATCCACCTGCAGCCCAGCACTCCTGGGGTCCGGACTaGTGGCCTGTGGATCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: TSLEAPCLGLYNPPAAQHSWGPD*WPVDPG Trigger: GCCTGGATCCACAGGCCAGCAGTCCGGACCCCAGGA...GTGCTGGGCTGCAGGTGGATTGTAGAGGCCAAGGCAGGGAGCTTCTAGACTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS-3UTR GCA 90 bp | CTTTTATTGCACAAGTCTAGAAGCTCCCTGCCTTGGCCTCTACAATCCACCTGCCAGGGATCAGGCGACTaGGGGAGGCACACAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LLLHKSRSSLPWPLQSTCQGSGD*GRHTGA Trigger: GGCCCCTGTGTGCCTCCCGCAGTCGCCTGATCCCTG...GCAGGTGGATTGTAGAGGCCAAGGCAGGGAGCTTCTAGACTTGTGCAATAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS-3UTR GCA 90 bp | TGCTTTTATTGCACAAGTCTAGAAGCTCCCTGCCTTGGCCTCTACAATCCACCTCAGGGATCAGGCGACTaGGGGAGGCACACAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: CFYCTSLEAPCLGLYNPPQGSGD*GRHTGA Trigger: GGCCCCTGTGTGCCTCCCGCAGTCGCCTGATCCCTG...AGGTGGATTGTAGAGGCCAAGGCAGGGAGCTTCTAGACTTGTGCAATAAAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS-3UTR GCA 90 bp | TGCTTTTATTGCACAAGTCTAGAAGCTCCCTGCCTTGGCCTCTACAATCCACCTAGGTCCTTCTCCCGCTaGACCAGCACCGCTCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: CFYCTSLEAPCLGLYNPPRSFSR*TSTAPR Trigger: CCGCGGAGCGGTGCTGGTGCAGCGGGAGAAGGACCT...AGGTGGATTGTAGAGGCCAAGGCAGGGAGCTTCTAGACTTGTGCAATAAAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS-3UTR CCA 90 bp | CACAAGTCTAGAAGCTCCCTGCCTTGGCCTCTACAATCCACCTGCAGCCCAGCACGGACTGCTGGCCTGTaGATCCAGGCTTCACTTTTG | + |
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Preference number: 4 (lower is better) Translates to: HKSRSSLPWPLQSTCSPARTAGL*IQASLL Trigger: CAAAAGTGAAGCCTGGATCCACAGGCCAGCAGTCCG...TGCTGGGCTGCAGGTGGATTGTAGAGGCCAAGGCAGGGAGCTTCTAGACTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS-3UTR GCA 90 bp | TGCTTTTATTGCACAAGTCTAGAAGCTCCCTGCCTTGGCCTCTACAATCCACCTTCCTGGGGTCCGGACTaGTGGCCTGTGGATCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: CFYCTSLEAPCLGLYNPPSWGPD*WPVDPG Trigger: GCCTGGATCCACAGGCCAGCAGTCCGGACCCCAGGA...AGGTGGATTGTAGAGGCCAAGGCAGGGAGCTTCTAGACTTGTGCAATAAAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS-3UTR GCA 90 bp | ACAAGTCTAGAAGCTCCCTGCCTTGGCCTCTACAATCCACCTGCAGCCCAGCACCCCAGGCTTGCTCTCTaGATACCGCGATTCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: TSLEAPCLGLYNPPAAQHPRLAL*IPRFLF Trigger: GAAAAGGAATCGCGGTATGCAGAGAGCAAGCCTGGG...GTGCTGGGCTGCAGGTGGATTGTAGAGGCCAAGGCAGGGAGCTTCTAGACTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS-3UTR CCA 90 bp | CGGCAGCATTGCTTTTATTGCACAAGTCTAGAAGCTCCCTGCCTTGGCCTCTACAGTTCCAGTTGTAGGTaGACAGGTCCTTCTCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: RQHCFYCTSLEAPCLGLYSSSCR*TGPSPA Trigger: AGCGGGAGAAGGACCTGTCCACCTACAACTGGAACT...GTAGAGGCCAAGGCAGGGAGCTTCTAGACTTGTGCAATAAAAGCAATGCTGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS-3UTR CCA 90 bp | GCAGCATTGCTTTTATTGCACAAGTCTAGAAGCTCCCTGCCTTGGCCTCTACAACGGACTGCTGGCCTGTaGATCCAGGCTTCACTTTTG | + |
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Preference number: 4 (lower is better) Translates to: AALLLLHKSRSSLPWPLQRTAGL*IQASLL Trigger: CAAAAGTGAAGCCTGGATCCACAGGCCAGCAGTCCG...TTGTAGAGGCCAAGGCAGGGAGCTTCTAGACTTGTGCAATAAAAGCAATGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS-3UTR CCA 90 bp | TGCTTTTATTGCACAAGTCTAGAAGCTCCCTGCCTTGGCCTCTACAATCCACCTAGTTCCAGTTGTAGGTaGACAGGTCCTTCTCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: CFYCTSLEAPCLGLYNPPSSSCR*TGPSPA Trigger: AGCGGGAGAAGGACCTGTCCACCTACAACTGGAACT...AGGTGGATTGTAGAGGCCAAGGCAGGGAGCTTCTAGACTTGTGCAATAAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS-3UTR GCA 90 bp | TGCTTTTATTGCACAAGTCTAGAAGCTCCCTGCCTTGGCCTCTACAATCCACCTAGGAGAAGCAGCAGCTaGCAAGAAGCCATTGAGATC | + |
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Preference number: 4 (lower is better) Translates to: CFYCTSLEAPCLGLYNPPRRSSS*QEAIEI Trigger: GATCTCAATGGCTTCTTGGCAGCTGCTGCTTCTCCT...AGGTGGATTGTAGAGGCCAAGGCAGGGAGCTTCTAGACTTGTGCAATAAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS-3UTR GCA 90 bp | TTTTATTGCACAAGTCTAGAAGCTCCCTGCCTTGGCCTCTACAATCCACCTGCAAGGAGAAGCAGCAGCTaGCAAGAAGCCATTGAGATC | + |
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Preference number: 4 (lower is better) Translates to: FYCTSLEAPCLGLYNPPARRSSS*QEAIEI Trigger: GATCTCAATGGCTTCTTGGCAGCTGCTGCTTCTCCT...TGCAGGTGGATTGTAGAGGCCAAGGCAGGGAGCTTCTAGACTTGTGCAATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS-3UTR GCA 90 bp | ATTTTCAACAGAACGGGACATTCCTTAACTAGTAGTTTAAAAAGCACCGACTTTAGGTCCTTCTCCCGCTaGACCAGCACCGCTCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: IFNRTGHSLTSSLKSTDFRSFSR*TSTAPR Trigger: CCGCGGAGCGGTGCTGGTGCAGCGGGAGAAGGACCT...AAAGTCGGTGCTTTTTAAACTACTAGTTAAGGAATGTCCCGTTCTGTTGAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007433.5 |
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| 3UTR CAA 72 bp | AAAATAACACACTGTAAGACGGCAGCATTGCTTTTATaGCACAAGTCTAGAAGCTCCCTGCCTTGGCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: KITHCKTAALLL*HKSRSSLPWPL Trigger: TAGAGGCCAAGGCAGGGAGCTTCTAGACTTGTGCAATAAAAGCAATGCTGCCGTCTTACAGTGTGTTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007433.5 |
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| CDS GCA 90 bp | CGACGACCTACGAGCGCGCAGCCCTGCAGACCCAGGCTTGCTCTCTaGATACCGCGATTCCTTTTCCCAGGCATTAACGAGTTCCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: RRPTSAQPCRPRLAL*IPRFLFPGINEFLG Trigger: CCCCAGGAACTCGTTAATGCCTGGGAAAAGGAATCGCGGTATGCAGAGAGCAAGCCTGGGTCTGCAGGGCTGCGCGCTCGTAGGTCGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS-3UTR CAA 90 bp | TTTTATTGCACAAGTCTAGAAGCTCCCTGCCTTGGCCTCTACAATCCACCTGCACCTGCAGACCCAGGCTaGCTCTCTGCATACCGCGAT | + |
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Preference number: 5 (lower is better) Translates to: FYCTSLEAPCLGLYNPPAPADPG*LSAYRD Trigger: ATCGCGGTATGCAGAGAGCAAGCCTGGGTCTGCAGG...TGCAGGTGGATTGTAGAGGCCAAGGCAGGGAGCTTCTAGACTTGTGCAATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS-3UTR CAA 90 bp | CAGCATTGCTTTTATTGCACAAGTCTAGAAGCTCCCTGCCTTGGCCTCTACAATCCTGCAGACCCAGGCTaGCTCTCTGCATACCGCGAT | + |
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Preference number: 5 (lower is better) Translates to: QHCFYCTSLEAPCLGLYNPADPG*LSAYRD Trigger: ATCGCGGTATGCAGAGAGCAAGCCTGGGTCTGCAGG...ATTGTAGAGGCCAAGGCAGGGAGCTTCTAGACTTGTGCAATAAAAGCAATGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS GCA 72 bp | CGGCGGGCATGGCGACGACCTACGAGCGCGCAGCCCTaGAGACCCAGGCTTGCTCTCTGCATACCGCGATTC | + |
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Preference number: 6 (lower is better) Translates to: RRAWRRPTSAQP*RPRLALCIPRF Trigger: GAATCGCGGTATGCAGAGAGCAAGCCTGGGTCTGCAGGGCTGCGCGCTCGTAGGTCGTCGCCATGCCCGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS CAA 90 bp | GTTCCTGGGGTCCGGACTGCTGGCCTGTGGATCCAGGCTTCACTTTaGCCAGCGGCTCCCCATAGGTGGCGACACAGAGGAGAAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VPGVRTAGLWIQASL*PAAPHRWRHRGEAA Trigger: TGCTGCTTCTCCTCTGTGTCGCCACCTATGGGGAGCCGCTGGCAAAAGTGAAGCCTGGATCCACAGGCCAGCAGTCCGGACCCCAGGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS GCA 72 bp | TCCGGACTGCTGGCCTGTGGATCCAGGCTTCACTTTTaGCAGCGGCTCCCCATAGGTGGCGACACAGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SGLLACGSRLHF*QRLPIGGDTEE Trigger: CTCCTCTGTGTCGCCACCTATGGGGAGCCGCTGGCAAAAGTGAAGCCTGGATCCACAGGCCAGCAGTCCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS CAA 72 bp | GACGACCTACGAGCGCGCAGCCCTGCAGACCCAGGCTaGCTCTCTGCATACCGCGATTCCTTTTCCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: DDLRARSPADPG*LSAYRDSFSQA Trigger: TGCCTGGGAAAAGGAATCGCGGTATGCAGAGAGCAAGCCTGGGTCTGCAGGGCTGCGCGCTCGTAGGTCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS GCA 72 bp | ACGACCTACGAGCGCGCAGCCCTGCAGACCCAGGCTTaGTCTCTGCATACCGCGATTCCTTTTCCCAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: TTYERAALQTQA*SLHTAIPFPRH Trigger: ATGCCTGGGAAAAGGAATCGCGGTATGCAGAGAGCAAGCCTGGGTCTGCAGGGCTGCGCGCTCGTAGGTCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS GCA 72 bp | ACGAGCGCGCAGCCCTGCAGACCCAGGCTTGCTCTCTaGATACCGCGATTCCTTTTCCCAGGCATTAACGAG | + |
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Preference number: 6 (lower is better) Translates to: TSAQPCRPRLAL*IPRFLFPGINE Trigger: CTCGTTAATGCCTGGGAAAAGGAATCGCGGTATGCAGAGAGCAAGCCTGGGTCTGCAGGGCTGCGCGCTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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| CDS CCA 72 bp | TACCGCGATTCCTTTTCCCAGGCATTAACGAGTTCCTaGGGTCCGGACTGCTGGCCTGTGGATCCAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: YRDSFSQALTSS*GPDCWPVDPGF Trigger: GAAGCCTGGATCCACAGGCCAGCAGTCCGGACCCCAGGAACTCGTTAATGCCTGGGAAAAGGAATCGCGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007433.5 ENSMUST00000178033.5 |
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