Pregenerated sensors for KIRREL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036915Ensembl transcript IDs: ENSMUST00000045817.14, ENSMUST00000169893.3, ENSMUST00000170152.8
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTTGGTTCCCAGATAATGAACAGCCATGTAGGCTATACTTATTGGCCAGGACGCGTCATCAACTTGTTCTaGCTCCCCAGAAATCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: FGSQIMNSHVGYTYWPGRVINLF*LPRNLD Trigger: GTCCAGATTTCTGGGGAGTCAGAACAAGTTGATGAC...GCGTCCTGGCCAATAAGTATAGCCTACATGGCTGTTCATTATCTGGGAACCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| 3UTR-3UTR GCA 90 bp | GCAGATGGTCATATATCTTCTCTACTACTTCCATCCATATCCCTAGTTCCCATCGGAAAGCGGCCATATTaGTCCCACTTGGAGAATCCA | + |
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Preference number: 2 (lower is better) Translates to: ADGHISSLLLPSISLVPIGKRPY*SHLENP Trigger: TGGATTCTCCAAGTGGGAGCAATATGGCCGCTTTCC...GATGGGAACTAGGGATATGGATGGAAGTAGTAGAGAAGATATATGACCATCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTCCTTCAATGTTCAGTTTTGGAGGGGTTGGTCATCAACTTGTTCTGACTGGACAACACACTATATaGCAAACAGAAGATTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: FPPSMFSFGGVGHQLVLTGQHTI*QTEDSK Trigger: CTTGGAATCTTCTGTTTGCCATATAGTGTGTTGTCC...AGTCAGAACAAGTTGATGACCAACCCCTCCAAAACTGAACATTGAAGGAGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| 3UTR-3UTR TCA 90 bp | TTGTCCCTCTGCAAAGTATTTAGTCATTTAGTCACCATCTTGAATGTCTTTCTCAGAATCCACTTTGGCTaGACTGAGTGTACACCAACA | + |
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Preference number: 2 (lower is better) Translates to: LSLCKVFSHLVTILNVFLRIHFG*TECTPT Trigger: TGTTGGTGTACACTCAGTTCAGCCAAAGTGGATTCT...GAGAAAGACATTCAAGATGGTGACTAAATGACTAAATACTTTGCAGAGGGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| 3UTR TCA 72 bp | GGCCATATTGCTCCCACTTGGAGAATCCACTTTGGCTaGACTGAGTGTACACCAACAGTCCTGATGCTTGTA | + |
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Preference number: 3 (lower is better) Translates to: GHIAPTWRIHFG*TECTPTVLMLV Trigger: TACAAGCATCAGGACTGTTGGTGTACACTCAGTTCAGCCAAAGTGGATTCTCCAAGTGGGAGCAATATGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| 3UTR-3UTR CAA 90 bp | TTCTCTACTACTTCCATCCATATCCCTAGTTCCCATCTTTGTCCCTCTGCAAAGCCATATTGCTCCCACTaGGAGAATCCACTTTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: FSTTSIHIPSSHLCPSAKPYCSH*ENPLWL Trigger: CAGCCAAAGTGGATTCTCCAAGTGGGAGCAATATGG...CTTTGCAGAGGGACAAAGATGGGAACTAGGGATATGGATGGAAGTAGTAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| 3UTR CCA 72 bp | GTTCTGACTCCCCAGAAATCTGGACAACACACTATATaGCAAACAGAAGATTCCAAGACCCTTCACTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: VLTPQKSGQHTI*QTEDSKTLHLE Trigger: CTCCAAGTGAAGGGTCTTGGAATCTTCTGTTTGCCATATAGTGTGTTGTCCAGATTTCTGGGGAGTCAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| 3UTR-3UTR CAA 90 bp | TGTCTTATGTTATCCTTTCTCTTGATGCAGATGGTCATATATCTTCTCTACTACGGGAAAGCGGCCATATaGCTCCCACTTGGAGAATCC | + |
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Preference number: 3 (lower is better) Translates to: CLMLSFLLMQMVIYLLYYGKAAI*LPLGES Trigger: GGATTCTCCAAGTGGGAGCAATATGGCCGCTTTCCC...GTAGTAGAGAAGATATATGACCATCTGCATCAAGAGAAAGGATAACATAAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| 3UTR CCA 72 bp | GGTTGGTCATCAACTTGTTCTGACTCCCCAGAAATCTaGACAACACACTATATGGCAAACAGAAGATTCCAA | + |
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Preference number: 3 (lower is better) Translates to: GWSSTCSDSPEI*TTHYMANRRFQ Trigger: TTGGAATCTTCTGTTTGCCATATAGTGTGTTGTCCAGATTTCTGGGGAGTCAGAACAAGTTGATGACCAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR GCA 90 bp | TGGTTCCCAGATAATGAACAGCCATGTAGGCTATACTTATTGGCCAGGACGCGGTCACTGTGGTCGGTGTaGACAATGGGACCCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: WFPDNEQPCRLYLLARTRSLWSV*TMGPRS Trigger: GGACCGGGGTCCCATTGTGCACACCGACCACAGTGA...CCGCGTCCTGGCCAATAAGTATAGCCTACATGGCTGTTCATTATCTGGGAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR TCA 90 bp | ATGCTTGTAATGATCTTTCCCTCCTTCAATGTTCAGTTTTGGAGGGGTTGGTCACCCACCTGTAGCCAGTaGCAGGAGGCTGGGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: MLVMIFPSFNVQFWRGWSPTCSQ*QEAGQW Trigger: CCACTGCCCAGCCTCCTGTCACTGGCTACAGGTGGG...TGACCAACCCCTCCAAAACTGAACATTGAAGGAGGGAAAGATCATTACAAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR TCA 90 bp | ACACCAACAGTCCTGATGCTTGTAATGATCTTTCCCTCCTTCAATGTTCAGTTTTTCCGACCGCGTTGCTaGCCTCGCAGGACACCGGCT | + |
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Preference number: 4 (lower is better) Translates to: TPTVLMLVMIFPSFNVQFFRPRC*PRRTPA Trigger: AGCCGGTGTCCTGCGAGGTCAGCAACGCGGTCGGAA...AAACTGAACATTGAAGGAGGGAAAGATCATTACAAGCATCAGGACTGTTGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR TCA 90 bp | ACTCCCCAGAAATCTGGACAACACACTATATGGCAAACAGAAGATTCCAAGACCCGCGCCAGACACAGCTaGAGGAGGCATCTTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: TPQKSGQHTIWQTEDSKTRARHS*RRHLSP Trigger: TGGGGAAAGATGCCTCCTTCAGCTGTGTCTGGCGCG...GGTCTTGGAATCTTCTGTTTGCCATATAGTGTGTTGTCCAGATTTCTGGGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR TCA 90 bp | GCAGATGGTCATATATCTTCTCTACTACTTCCATCCATATCCCTAGTTCCCATCCTCCTCAGGGCCACGTaGACTGGAACCCTCGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ADGHISSLLLPSISLVPILLRAT*TGTLAA Trigger: AGCAGCGAGGGTTCCAGTTCACGTGGCCCTGAGGAG...GATGGGAACTAGGGATATGGATGGAAGTAGTAGAGAAGATATATGACCATCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR GCA 90 bp | TGTTCTGACTCCCCAGAAATCTGGACAACACACTATATGGCAAACAGAAGATTCACACTTCCAGCGCGGTaGTGCGGTTGGCGCTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: CSDSPEIWTTHYMANRRFTLPAR*CGWRFR Trigger: TCGGAAGCGCCAACCGCAGCACCGCGCTGGAAGTGT...GAATCTTCTGTTTGCCATATAGTGTGTTGTCCAGATTTCTGGGGAGTCAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR GCA 90 bp | GATAGTGGCCATTTTGGTTCCCAGATAATGAACAGCCATGTAGGCTATACTTATCCCGGTCCTCACTGCTaGCTGTCTCCTCCTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: DSGHFGSQIMNSHVGYTYPGPHC*LSPPQG Trigger: GCCCTGAGGAGGAGACAGGCAGCAGTGAGGACCGGG...ATAAGTATAGCCTACATGGCTGTTCATTATCTGGGAACCAAAATGGCCACTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | TGTACACCAACAGTCCTGATGCTTGTAATGATCTTTCCCTCCTTCAATGTTCAGGTACCGGGACCACCCTaGAAGGTCTCTTTCGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: CTPTVLMLVMIFPSFNVQVPGPP*KVSFAP Trigger: GGGGGCGAAAGAGACCTTCCAGGGTGGTCCCGGTAC...CTGAACATTGAAGGAGGGAAAGATCATTACAAGCATCAGGACTGTTGGTGTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | ACTCCCCAGAAATCTGGACAACACACTATATGGCAAACAGAAGATTCCAAGACCGCAAACACCACACACTaGAGGCGAGCAGGACCCCTC | + |
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Preference number: 4 (lower is better) Translates to: TPQKSGQHTIWQTEDSKTANTTH*RRAGPL Trigger: GAGGGGTCCTGCTCGCCTCCAGTGTGTGGTGTTTGC...GGTCTTGGAATCTTCTGTTTGCCATATAGTGTGTTGTCCAGATTTCTGGGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR TCA 90 bp | CCAACAGTCCTGATGCTTGTAATGATCTTTCCCTCCTTCAATGTTCAGTTTTGGCAGTTGGGCTGGTCGTaGTCGGAGACCTGCTTGCGA | + |
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Preference number: 4 (lower is better) Translates to: PTVLMLVMIFPSFNVQFWQLGWS*SETCLR Trigger: TCGCAAGCAGGTCTCCGATCACGACCAGCCCAACTG...CCAAAACTGAACATTGAAGGAGGGAAAGATCATTACAAGCATCAGGACTGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR TCA 90 bp | CAGAAATCTGGACAACACACTATATGGCAAACAGAAGATTCCAAGACCCTTCACTTCAGGGGCAGGTCGTaGATCCCCACGACTCCGACA | + |
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Preference number: 4 (lower is better) Translates to: QKSGQHTIWQTEDSKTLHFRGRS*IPTTPT Trigger: TGTCGGAGTCGTGGGGATTCACGACCTGCCCCTGAA...GTGAAGGGTCTTGGAATCTTCTGTTTGCCATATAGTGTGTTGTCCAGATTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR GCA 90 bp | TGTTCTGACTCCCCAGAAATCTGGACAACACACTATATGGCAAACAGAAGATTCTGGTCTGGTGGAAGCTaGTCCCATCCAGCCGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: CSDSPEIWTTHYMANRRFWSGGS*SHPAGS Trigger: GGATCCGGCTGGATGGGAGCAGCTTCCACCAGACCA...GAATCTTCTGTTTGCCATATAGTGTGTTGTCCAGATTTCTGGGGAGTCAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR GCA 90 bp | TTCTCTACTACTTCCATCCATATCCCTAGTTCCCATCTTTGTCCCTCTGCAAAGAGAGGTGGCTGCAGATaGTGCACCAGCCACAATCCG | + |
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Preference number: 4 (lower is better) Translates to: FSTTSIHIPSSHLCPSAKRGGCR*CTSHNP Trigger: CGGATTGTGGCTGGTGCAGCATCTGCAGCCACCTCT...CTTTGCAGAGGGACAAAGATGGGAACTAGGGATATGGATGGAAGTAGTAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | CCTGATGCTTGTAATGATCTTTCCCTCCTTCAATGTTCAGTTTTGGAGGGGTTGTTCAGCGTGGTCTGGTaGAAGCTGCTCCCATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PDACNDLSLLQCSVLEGLFSVVW*KLLPSS Trigger: GCTGGATGGGAGCAGCTTCCACCAGACCACGCTGAA...CAACCCCTCCAAAACTGAACATTGAAGGAGGGAAAGATCATTACAAGCATCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | GACTCCCCAGAAATCTGGACAACACACTATATGGCAAACAGAAGATTCCAAGACTCCTTCAGCGTGGTCTaGTGGAAGCTGCTCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: DSPEIWTTHYMANRRFQDSFSVV*WKLLPS Trigger: GGATGGGAGCAGCTTCCACCAGACCACGCTGAAGGA...GTCTTGGAATCTTCTGTTTGCCATATAGTGTGTTGTCCAGATTTCTGGGGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | CCTGATGCTTGTAATGATCTTTCCCTCCTTCAATGTTCAGTTTTGGAGGGGTTGGGTTATCCGTGGAAGTaGGTTCCCGCGCCAGACACA | + |
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Preference number: 4 (lower is better) Translates to: PDACNDLSLLQCSVLEGLGYPWK*VPAPDT Trigger: TGTGTCTGGCGCGGGAACCCACTTCCACGGATAACC...CAACCCCTCCAAAACTGAACATTGAAGGAGGGAAAGATCATTACAAGCATCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | ACTTCCATCCATATCCCTAGTTCCCATCTTTGTCCCTCTGCAAAGTATTTAGTCGGTCCAGGTTATCCGTaGAAGTGGGTTCCCGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: TSIHIPSSHLCPSAKYLVGPGYP*KWVPAP Trigger: TGGCGCGGGAACCCACTTCCACGGATAACCTGGACC...GACTAAATACTTTGCAGAGGGACAAAGATGGGAACTAGGGATATGGATGGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR TCA 90 bp | TGCAAAGTATTTAGTCATTTAGTCACCATCTTGAATGTCTTTCTCATGGGAAAGCCGGAGCTCAGCACCTaGGAGCCACCCATGCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: CKVFSHLVTILNVFLMGKPELST*EPPMRV Trigger: GACCCGCATGGGTGGCTCTCAGGTGCTGAGCTCCGG...CTTTCCCATGAGAAAGACATTCAAGATGGTGACTAAATGACTAAATACTTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR GCA 90 bp | ACTCCCCAGAAATCTGGACAACACACTATATGGCAAACAGAAGATTCCAAGACCGATCGGAGACCTGCTTaGGAAGCCTGGCACTCATAC | + |
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Preference number: 4 (lower is better) Translates to: TPQKSGQHTIWQTEDSKTDRRPA*EAWHSY Trigger: GTATGAGTGCCAGGCTTCGCAAGCAGGTCTCCGATC...GGTCTTGGAATCTTCTGTTTGCCATATAGTGTGTTGTCCAGATTTCTGGGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR GCA 90 bp | CAGAAATCTGGACAACACACTATATGGCAAACAGAAGATTCCAAGACCCTTCACAAGGAGAGAGGTGGCTaGAGATGCTGCACCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: QKSGQHTIWQTEDSKTLHKERGG*RCCTSH Trigger: GTGGCTGGTGCAGCATCTGCAGCCACCTCTCTCCTT...GTGAAGGGTCTTGGAATCTTCTGTTTGCCATATAGTGTGTTGTCCAGATTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | GACTCCCCAGAAATCTGGACAACACACTATATGGCAAACAGAAGATTCCAAGACACCATCACGTGCAGTTaGGCTGGTCGTGATCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: DSPEIWTTHYMANRRFQDTITCS*AGRDRR Trigger: TCTCCGATCACGACCAGCCCAACTGCACGTGATGGT...GTCTTGGAATCTTCTGTTTGCCATATAGTGTGTTGTCCAGATTTCTGGGGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | TTTGGTTCCCAGATAATGAACAGCCATGTAGGCTATACTTATTGGCCAGGACGCGCTCAGTCAGGAAAGTaGCATCTGCAACGACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FGSQIMNSHVGYTYWPGRAQSGK*HLQRPP Trigger: TGGAGGTCGTTGCAGATGCCACTTTCCTGACTGAGC...GCGTCCTGGCCAATAAGTATAGCCTACATGGCTGTTCATTATCTGGGAACCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | GCAGATGGTCATATATCTTCTCTACTACTTCCATCCATATCCCTAGTTCCCATCACGCTGGTGGCTGGGTaGAGACAAGGTAGCATACGG | + |
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Preference number: 4 (lower is better) Translates to: ADGHISSLLLPSISLVPITLVAG*RQGSIR Trigger: CCGTATGCTACCTTGTCTCCACCCAGCCACCAGCGT...GATGGGAACTAGGGATATGGATGGAAGTAGTAGAGAAGATATATGACCATCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR TCA 90 bp | TTCCCTCCTTCAATGTTCAGTTTTGGAGGGGTTGGTCATCAACTTGTTCTGACTGTGGCACCATCATCATaGCTGGAAGGGGTCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: FPPSMFSFGGVGHQLVLTVAPSS*LEGVRN Trigger: ATTCCTGACCCCTTCCAGTCATGATGATGGTGCCAC...AGTCAGAACAAGTTGATGACCAACCCCTCCAAAACTGAACATTGAAGGAGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | TCTCTACTACTTCCATCCATATCCCTAGTTCCCATCTTTGTCCCTCTGCAAAGTTCCAGAGCTCAATTCTaGGGGTCCAAAGGATGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SLLLPSISLVPIFVPLQSSRAQF*GSKGCG Trigger: CCCACATCCTTTGGACCCCCAGAATTGAGCTCTGGA...ACTTTGCAGAGGGACAAAGATGGGAACTAGGGATATGGATGGAAGTAGTAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR TCA 90 bp | TTCCCTCCTTCAATGTTCAGTTTTGGAGGGGTTGGTCATCAACTTGTTCTGACTACCATTGGGGGATACTaGAGGCTCAGTGTAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: FPPSMFSFGGVGHQLVLTTIGGY*RLSVTA Trigger: AGCTGTTACACTGAGCCTTCAGTATCCCCCAATGGT...AGTCAGAACAAGTTGATGACCAACCCCTCCAAAACTGAACATTGAAGGAGGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | TTGTCCCTCTGCAAAGTATTTAGTCATTTAGTCACCATCTTGAATGTCTTTCTCCCAAACCACCGAGTCTaGGGCAGGGGAGGCAAACAC | + |
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Preference number: 4 (lower is better) Translates to: LSLCKVFSHLVTILNVFLPNHRV*GRGGKH Trigger: GTGTTTGCCTCCCCTGCCCCAGACTCGGTGGTTTGG...GAGAAAGACATTCAAGATGGTGACTAAATGACTAAATACTTTGCAGAGGGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR TCA 90 bp | ACACCAACAGTCCTGATGCTTGTAATGATCTTTCCCTCCTTCAATGTTCAGTTTATGCTGGCCACTGGCTaGATTCCCCGATATCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: TPTVLMLVMIFPSFNVQFMLATG*IPRYPV Trigger: TACTGGATATCGGGGAATTCAGCCAGTGGCCAGCAT...AAACTGAACATTGAAGGAGGGAAAGATCATTACAAGCATCAGGACTGTTGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR GCA 90 bp | GACTCCCCAGAAATCTGGACAACACACTATATGGCAAACAGAAGATTCCAAGACCACGGACTTAGGTTTTaGCTGCAGAATGGGTCCATA | + |
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Preference number: 4 (lower is better) Translates to: DSPEIWTTHYMANRRFQDHGLRF*LQNGSI Trigger: TATGGACCCATTCTGCAGGCAAAACCTAAGTCCGTG...GTCTTGGAATCTTCTGTTTGCCATATAGTGTGTTGTCCAGATTTCTGGGGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR GCA 90 bp | GATAGTGGCCATTTTGGTTCCCAGATAATGAACAGCCATGTAGGCTATACTTATTCGCTCTGTACAGTCTaGAGGGAGGGACTAAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: DSGHFGSQIMNSHVGYTYSLCTV*REGLSP Trigger: TGGACTTAGTCCCTCCCTGCAGACTGTACAGAGCGA...ATAAGTATAGCCTACATGGCTGTTCATTATCTGGGAACCAAAATGGCCACTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | CCTGATGCTTGTAATGATCTTTCCCTCCTTCAATGTTCAGTTTTGGAGGGGTTGCACCATCATCATGACTaGAAGGGGTCAGGAATAAGG | + |
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Preference number: 4 (lower is better) Translates to: PDACNDLSLLQCSVLEGLHHHHD*KGSGIR Trigger: CCTTATTCCTGACCCCTTCCAGTCATGATGATGGTG...CAACCCCTCCAAAACTGAACATTGAAGGAGGGAAAGATCATTACAAGCATCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | GTGTACACCAACAGTCCTGATGCTTGTAATGATCTTTCCCTCCTTCAATGTTCAGTAAAGTCGGACTCCTaGGTTCCGGAAATGTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: VYTNSPDACNDLSLLQCSVKSDS*VPEMCS Trigger: GCTACACATTTCCGGAACCCAGGAGTCCGACTTTAC...TGAACATTGAAGGAGGGAAAGATCATTACAAGCATCAGGACTGTTGGTGTACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR GCA 90 bp | CCAACAGTCCTGATGCTTGTAATGATCTTTCCCTCCTTCAATGTTCAGTTTTGGCTGGCACTCATACGATaGCTCATCTTCCAATTCCAC | + |
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Preference number: 4 (lower is better) Translates to: PTVLMLVMIFPSFNVQFWLALIR*LIFQFH Trigger: GTGGAATTGGAAGATGAGGCATCGTATGAGTGCCAG...CCAAAACTGAACATTGAAGGAGGGAAAGATCATTACAAGCATCAGGACTGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR GCA 90 bp | GCAGATGGTCATATATCTTCTCTACTACTTCCATCCATATCCCTAGTTCCCATCCGGACCAAGTTCTTTTaGTTAGAGAGAGAGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: ADGHISSLLLPSISLVPIRTKFF*LEREPW Trigger: CCATGGCTCTCTCTCTAAGCAAAAGAACTTGGTCCG...GATGGGAACTAGGGATATGGATGGAAGTAGTAGAGAAGATATATGACCATCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | ACTTCCATCCATATCCCTAGTTCCCATCTTTGTCCCTCTGCAAAGTATTTAGTCAGAACCAAATCACTGTaGTCGGTGTGCACAATGGGA | + |
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Preference number: 4 (lower is better) Translates to: TSIHIPSSHLCPSAKYLVRTKSL*SVCTMG Trigger: TCCCATTGTGCACACCGACCACAGTGATTTGGTTCT...GACTAAATACTTTGCAGAGGGACAAAGATGGGAACTAGGGATATGGATGGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | AACACACTATATGGCAAACAGAAGATTCCAAGACCCTTCACTTGGAGAGATGGACCCTGTAGTAACCGTTaGTTGGATCCTTTGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: NTLYGKQKIPRPFTWRDGPCSNR*LDPLSP Trigger: TGGAGACAAAGGATCCAACCAACGGTTACTACAGGG...TCCATCTCTCCAAGTGAAGGGTCTTGGAATCTTCTGTTTGCCATATAGTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR GCA 90 bp | CAGAAATCTGGACAACACACTATATGGCAAACAGAAGATTCCAAGACCCTTCACGACTTAGGTTTTGCCTaGAGAATGGGTCCATACAAC | + |
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Preference number: 4 (lower is better) Translates to: QKSGQHTIWQTEDSKTLHDLGFA*RMGPYN Trigger: GTTGTATGGACCCATTCTGCAGGCAAAACCTAAGTC...GTGAAGGGTCTTGGAATCTTCTGTTTGCCATATAGTGTGTTGTCCAGATTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | TGTCTTATGTTATCCTTTCTCTTGATGCAGATGGTCATATATCTTCTCTACTACGGTCATGCTGGCCACTaGCTGAATTCCCCGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: CLMLSFLLMQMVIYLLYYGHAGH*LNSPIS Trigger: GGATATCGGGGAATTCAGCCAGTGGCCAGCATGACC...GTAGTAGAGAAGATATATGACCATCTGCATCAAGAGAAAGGATAACATAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | TGCAAAGTATTTAGTCATTTAGTCACCATCTTGAATGTCTTTCTCATGGGAAAGATGTGGAGGTCATGCTaGCCACTGGCTGAATTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CKVFSHLVTILNVFLMGKMWRSC*PLAEFP Trigger: GGGGAATTCAGCCAGTGGCCAGCATGACCTCCACAT...CTTTCCCATGAGAAAGACATTCAAGATGGTGACTAAATGACTAAATACTTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR TCA 90 bp | TGCAGATGGTCATATATCTTCTCTACTACTTCCATCCATATCCCTAGTTCCCATAGCCTGCATGTCCTTTaGAACAGCAAAGGAAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: CRWSYIFSTTSIHIPSSHSLHVL*NSKGKR Trigger: TCGTTTTCCTTTGCTGTTTCAAAGGACATGCAGGCT...ATGGGAACTAGGGATATGGATGGAAGTAGTAGAGAAGATATATGACCATCTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | TGTCTTATGTTATCCTTTCTCTTGATGCAGATGGTCATATATCTTCTCTACTACTCCACAGGCTTAATGTaGAGGTCATGCTGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CLMLSFLLMQMVIYLLYYSTGLM*RSCWPL Trigger: CAGTGGCCAGCATGACCTCCACATTAAGCCTGTGGA...GTAGTAGAGAAGATATATGACCATCTGCATCAAGAGAAAGGATAACATAAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CCA 90 bp | TGTCTTATGTTATCCTTTCTCTTGATGCAGATGGTCATATATCTTCTCTACTACTTTCCACTGTTCCAGTaGCCTTGTCCTTCAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLMLSFLLMQMVIYLLYYFPLFQ*PCPSAW Trigger: CCACGCTGAAGGACAAGGCCACTGGAACAGTGGAAA...GTAGTAGAGAAGATATATGACCATCTGCATCAAGAGAAAGGATAACATAAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| 3UTR CAA 72 bp | TCCCTCTGCAAAGTATTTAGTCATTTAGTCACCATCTaGAATGTCTTTCTCATGGGAAAGCGGCCATATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLCKVFSHLVTI*NVFLMGKRPYC Trigger: GCAATATGGCCGCTTTCCCATGAGAAAGACATTCAAGATGGTGACTAAATGACTAAATACTTTGCAGAGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS GCA 90 bp | GGAAGGTCTCTTTCGCCCCCTAGAGCCAGCCCATCCTTAGTCCACTaGACGAGCCCCCTGTACGCGCCCAGAGCGCAGGGCAGCCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: GRSLSPPRASPSLVH*TSPLYAPRAQGSRA Trigger: AGCCCGGCTGCCCTGCGCTCTGGGCGCGTACAGGGGGCTCGTGCAGTGGACTAAGGATGGGCTGGCTCTAGGGGGCGAAAGAGACCTTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS GCA 90 bp | GAAGCCGCAGCGTGGGCCCGGAGCTCAGCACCTGAGAGCCACCCATaGGGGTCCAGGTTATCCGTGGAAGTGGGTTCCCGCGCCAGACAC | + |
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Preference number: 5 (lower is better) Translates to: EAAAWARSSAPESHP*GSRLSVEVGSRARH Trigger: GTGTCTGGCGCGGGAACCCACTTCCACGGATAACCTGGACCCGCATGGGTGGCTCTCAGGTGCTGAGCTCCGGGCCCACGCTGCGGCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 90 bp | TCTCCTCGGCTCAGCCCTGCATACATAGTCGCCCGCATCCTCCAGTaGCACGGACGGAAGCCGCAGCGTGGGCCCGGAGCTCAGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPRLSPAYIVARILQ*HGRKPQRGPGAQHL Trigger: CAGGTGCTGAGCTCCGGGCCCACGCTGCGGCTTCCGTCCGTGGCACTGGAGGATGCGGGCGACTATGTATGCAGGGCTGAGCCGAGGAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS TCA 90 bp | AGTGCCACGGACGGAAGCCGCAGCGTGGGCCCGGAGCTCAGCACCTaGGAGCCACCCATGCGGGTCCAGGTTATCCGTGGAAGTGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SATDGSRSVGPELST*EPPMRVQVIRGSGF Trigger: GAACCCACTTCCACGGATAACCTGGACCCGCATGGGTGGCTCTCAGGTGCTGAGCTCCGGGCCCACGCTGCGGCTTCCGTCCGTGGCACT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 90 bp | CCTGCGCTTTGCCGCCTCCCAGACCCGTTCTCCTCGGCTCAGCCCTaGATACATAGTCGCCCGCATCCTCCAGTGCCACGGACGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PALCRLPDPFSSAQP*IHSRPHPPVPRTEA Trigger: GGCTTCCGTCCGTGGCACTGGAGGATGCGGGCGACTATGTATGCAGGGCTGAGCCGAGGAGAACGGGTCTGGGAGGCGGCAAAGCGCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS GCA 90 bp | TGCAGGGCTGTCACTACAGGGGGTGCGTTCACAGTCAGCCTCGCCTaGGCTTTGCCGCCTCCCAGACCCGTTCTCCTCGGCTCAGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CRAVTTGGAFTVSLA*ALPPPRPVLLGSAL Trigger: CAGGGCTGAGCCGAGGAGAACGGGTCTGGGAGGCGGCAAAGCGCAGGCGAGGCTGACTGTGAACGCACCCCCTGTAGTGACAGCCCTGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS TCA 90 bp | ACACTTCCAGCGCGGTGCTGCGGTTGGCGCTTCCGACCGCGTTGCTaGCCTCGCAGGACACCGGCTCAGTCAGGAAAGTGGCATCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TLPARCCGWRFRPRC*PRRTPAQSGKWHLQ Trigger: TTGCAGATGCCACTTTCCTGACTGAGCCGGTGTCCTGCGAGGTCAGCAACGCGGTCGGAAGCGCCAACCGCAGCACCGCGCTGGAAGTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 90 bp | GTTGCTGACCTCGCAGGACACCGGCTCAGTCAGGAAAGTGGCATCTaGAACGACCTCCAACCTTGGCCCACGTGCCCCAAGCACCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VADLAGHRLSQESGI*NDLQPWPTCPKHRG Trigger: TCCCCGGTGCTTGGGGCACGTGGGCCAAGGTTGGAGGTCGTTGCAGATGCCACTTTCCTGACTGAGCCGGTGTCCTGCGAGGTCAGCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 90 bp | CTGTCACTACAGGGGGTGCGTTCACAGTCAGCCTCGCCTGCGCTTTaGCGCCTCCCAGACCCGTTCTCCTCGGCTCAGCCCTGCATACAT | + |
|
Preference number: 5 (lower is better) Translates to: LSLQGVRSQSASPAL*RLPDPFSSAQPCIH Trigger: ATGTATGCAGGGCTGAGCCGAGGAGAACGGGTCTGGGAGGCGGCAAAGCGCAGGCGAGGCTGACTGTGAACGCACCCCCTGTAGTGACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CCA 90 bp | GGAGCTCAGCACCTGAGAGCCACCCATGCGGGTCCAGGTTATCCGTaGAAGTGGGTTCCCGCGCCAGACACAGCTGAAGGAGGCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GAQHLRATHAGPGYP*KWVPAPDTAEGGIF Trigger: AAAGATGCCTCCTTCAGCTGTGTCTGGCGCGGGAACCCACTTCCACGGATAACCTGGACCCGCATGGGTGGCTCTCAGGTGCTGAGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CCA 90 bp | GGCAAACACCACACACTGGAGGCGAGCAGGACCCCTCAGAAAGGCTaGTGCAGGTTGCAGGGCTGTCACTACAGGGGGTGCGTTCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: GKHHTLEASRTPQKG*CRLQGCHYRGCVHS Trigger: ACTGTGAACGCACCCCCTGTAGTGACAGCCCTGCAACCTGCACCAGCCTTTCTGAGGGGTCCTGCTCGCCTCCAGTGTGTGGTGTTTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS GCA 90 bp | AAACACCACACACTGGAGGCGAGCAGGACCCCTCAGAAAGGCTGGTaGAGGTTGCAGGGCTGTCACTACAGGGGGTGCGTTCACAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KHHTLEASRTPQKGW*RLQGCHYRGCVHSQ Trigger: CTGACTGTGAACGCACCCCCTGTAGTGACAGCCCTGCAACCTGCACCAGCCTTTCTGAGGGGTCCTGCTCGCCTCCAGTGTGTGGTGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CCA 90 bp | GTCATAGTAAGTAGGAGTCCCTGGGAGACCGATCGGAGAGGGCGGTaGCAAGAAGAGGCCTCCTCCAGGAGCTTCCCCAAGGCTAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: VIVSRSPWETDRRGR*QEEASSRSFPKAKA Trigger: AGCCTTAGCCTTGGGGAAGCTCCTGGAGGAGGCCTCTTCTTGCCACCGCCCTCTCCGATCGGTCTCCCAGGGACTCCTACTTACTATGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000170152.8 |
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| CDS GCA 90 bp | CCACTGTTCCAGTGGCCTTGTCCTTCAGCGTGGTCTGGTGGAAGCTaGTCCCATCCAGCCGGATCCCATCTCGGAACCACAGTAGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLFQWPCPSAWSGGS*SHPAGSHLGTTVVQ Trigger: CTGAACTACTGTGGTTCCGAGATGGGATCCGGCTGGATGGGAGCAGCTTCCACCAGACCACGCTGAAGGACAAGGCCACTGGAACAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 90 bp | GAATCCCCACGACTCCGACAGGTCAGATTTCCAGGAACCATCACGTaGAGTTGGGCTGGTCGTGATCGGAGACCTGCTTGCGAAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ESPRLRQVRFPGTIT*SWAGRDRRPACEAW Trigger: CCAGGCTTCGCAAGCAGGTCTCCGATCACGACCAGCCCAACTGCACGTGATGGTTCCTGGAAATCTGACCTGTCGGAGTCGTGGGGATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169893.3 |
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| CDS CCA 90 bp | ACAATCCGGACAGTAGGCAGCAAGTCTCTACGGCCCAAGTGGATCTaGACTCGTCCCTCTCCTAGCCGGTTGCGGGCACTGCAGTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: TIRTVGSKSLRPKWI*TRPSPSRLRALQLK Trigger: CTTCAACTGCAGTGCCCGCAACCGGCTAGGAGAGGGACGAGTCCAGATCCACTTGGGCCGTAGAGACTTGCTGCCTACTGTCCGGATTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CCA 90 bp | CCACGACTCCGACAGGTCAGATTTCCAGGAACCATCACGTGCAGTTaGGCTGGTCGTGATCGGAGACCTGCTTGCGAAGCCTGGCACTCA | + |
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Preference number: 5 (lower is better) Translates to: PRLRQVRFPGTITCS*AGRDRRPACEAWHS Trigger: TGAGTGCCAGGCTTCGCAAGCAGGTCTCCGATCACGACCAGCCCAACTGCACGTGATGGTTCCTGGAAATCTGACCTGTCGGAGTCGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169893.3 |
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| CDS GCA 90 bp | GAGGCATCTTTCCCCACGTCCACGGACACGGACTTAGGTTTTGCCTaGAGAATGGGTCCATACAACACTTCCAGCGCGGTGCTGCGGTTG | + |
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Preference number: 5 (lower is better) Translates to: EASFPTSTDTDLGFA*RMGPYNTSSAVLRL Trigger: CAACCGCAGCACCGCGCTGGAAGTGTTGTATGGACCCATTCTGCAGGCAAAACCTAAGTCCGTGTCCGTGGACGTGGGGAAAGATGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 90 bp | GAAGGAGGCATCTTTCCCCACGTCCACGGACACGGACTTAGGTTTTaGCTGCAGAATGGGTCCATACAACACTTCCAGCGCGGTGCTGCG | + |
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Preference number: 5 (lower is better) Translates to: EGGIFPHVHGHGLRF*LQNGSIQHFQRGAA Trigger: CGCAGCACCGCGCTGGAAGTGTTGTATGGACCCATTCTGCAGGCAAAACCTAAGTCCGTGTCCGTGGACGTGGGGAAAGATGCCTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 90 bp | GCAGCAGAGGACCACTCCAGTGATGACCATAAGGAGAGAGGTGGCTaGAGATGCTGCACCAGCCACAATCCGGACAGTAGGCAGCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: AAEDHSSDDHKERGG*RCCTSHNPDSRQQV Trigger: GACTTGCTGCCTACTGTCCGGATTGTGGCTGGTGCAGCATCTGCAGCCACCTCTCTCCTTATGGTCATCACTGGAGTGGTCCTCTGCTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CCA 90 bp | GTGTTTTCCACTGTTCCAGTGGCCTTGTCCTTCAGCGTGGTCTGGTaGAAGCTGCTCCCATCCAGCCGGATCCCATCTCGGAACCACAGT | + |
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Preference number: 5 (lower is better) Translates to: VFSTVPVALSFSVVW*KLLPSSRIPSRNHS Trigger: ACTGTGGTTCCGAGATGGGATCCGGCTGGATGGGAGCAGCTTCCACCAGACCACGCTGAAGGACAAGGCCACTGGAACAGTGGAAAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CCA 90 bp | AAGGTGTTTTCCACTGTTCCAGTGGCCTTGTCCTTCAGCGTGGTCTaGTGGAAGCTGCTCCCATCCAGCCGGATCCCATCTCGGAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: KVFSTVPVALSFSVV*WKLLPSSRIPSRNH Trigger: GTGGTTCCGAGATGGGATCCGGCTGGATGGGAGCAGCTTCCACCAGACCACGCTGAAGGACAAGGCCACTGGAACAGTGGAAAACACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CCA 90 bp | CGGTTGCGGGCACTGCAGTTGAAGCCGGTGGTAAAGTCGGACTCCTaGGTTCCGGAAATGTGTAGCACAGAAATAAGGCCAGGGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLRALQLKPVVKSDS*VPEMCSTEIRPGPC Trigger: ACAGGGCCCTGGCCTTATTTCTGTGCTACACATTTCCGGAACCCAGGAGTCCGACTTTACCACCGGCTTCAACTGCAGTGCCCGCAACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS TCA 90 bp | ACAGGTCAGATTTCCAGGAACCATCACGTGCAGTTGGGCTGGTCGTaGTCGGAGACCTGCTTGCGAAGCCTGGCACTCATACGATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TGQISRNHHVQLGWS*SETCLRSLALIRCL Trigger: GAGGCATCGTATGAGTGCCAGGCTTCGCAAGCAGGTCTCCGATCACGACCAGCCCAACTGCACGTGATGGTTCCTGGAAATCTGACCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169893.3 |
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| CDS GCA 90 bp | GAGGACCACTCCAGTGATGACCATAAGGAGAGAGGTGGCTGCAGATaGTGCACCAGCCACAATCCGGACAGTAGGCAGCAAGTCTCTACG | + |
|
Preference number: 5 (lower is better) Translates to: EDHSSDDHKERGGCR*CTSHNPDSRQQVST Trigger: CGTAGAGACTTGCTGCCTACTGTCCGGATTGTGGCTGGTGCAGCATCTGCAGCCACCTCTCTCCTTATGGTCATCACTGGAGTGGTCCTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CCA 90 bp | GGAATAAGGTGTTTTCCACTGTTCCAGTGGCCTTGTCCTTCAGCGTaGTCTGGTGGAAGCTGCTCCCATCCAGCCGGATCCCATCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GIRCFPLFQWPCPSA*SGGSCSHPAGSHLG Trigger: TCCGAGATGGGATCCGGCTGGATGGGAGCAGCTTCCACCAGACCACGCTGAAGGACAAGGCCACTGGAACAGTGGAAAACACCTTATTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS TCA 90 bp | AGGGCCTGGCTTCGCGCTCTGCAGATCAAGGTGGCACCATCATCATaGCTGGAAGGGGTCAGGAATAAGGTGTTTTCCACTGTTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RAWLRALQIKVAPSS*LEGVRNKVFSTVPV Trigger: CACTGGAACAGTGGAAAACACCTTATTCCTGACCCCTTCCAGTCATGATGATGGTGCCACCTTGATCTGCAGAGCGCGAAGCCAGGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CCA 90 bp | GATGCCTCATCTTCCAATTCCACAGGCTTAATGTGGAGGTCATGCTaGCCACTGGCTGAATTCCCCGATATCCAGTACCGGGACCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: DASSSNSTGLMWRSC*PLAEFPDIQYRDHP Trigger: AGGGTGGTCCCGGTACTGGATATCGGGGAATTCAGCCAGTGGCCAGCATGACCTCCACATTAAGCCTGTGGAATTGGAAGATGAGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CCA 90 bp | ACGTGCAGTTGGGCTGGTCGTGATCGGAGACCTGCTTGCGAAGCCTaGCACTCATACGATGCCTCATCTTCCAATTCCACAGGCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: TCSWAGRDRRPACEA*HSYDASSSNSTGLM Trigger: CATTAAGCCTGTGGAATTGGAAGATGAGGCATCGTATGAGTGCCAGGCTTCGCAAGCAGGTCTCCGATCACGACCAGCCCAACTGCACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CCA 90 bp | CATGACTGGAAGGGGTCAGGAATAAGGTGTTTTCCACTGTTCCAGTaGCCTTGTCCTTCAGCGTGGTCTGGTGGAAGCTGCTCCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: HDWKGSGIRCFPLFQ*PCPSAWSGGSCSHP Trigger: TGGATGGGAGCAGCTTCCACCAGACCACGCTGAAGGACAAGGCCACTGGAACAGTGGAAAACACCTTATTCCTGACCCCTTCCAGTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CCA 90 bp | CTTCCTGGGATCCGGACCAAGTTCTTTTGCTTAGAGAGAGAGCCATaGCGCCAGCAGCAGAGGACCACTCCAGTGATGACCATAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPGIRTKFFCLEREP*RQQQRTTPVMTIRR Trigger: TCTCCTTATGGTCATCACTGGAGTGGTCCTCTGCTGCTGGCGCCATGGCTCTCTCTCTAAGCAAAAGAACTTGGTCCGGATCCCAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CCA 90 bp | TCCTTTGTCTCCAGAGCCTCTTTTTCCTCAAGAACCAAATCACTGTaGTCGGTGTGCACAATGGGACCCCGGTCCTCACTGCTGCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SFVSRASFSSRTKSL*SVCTMGPRSSLLPV Trigger: GACAGGCAGCAGTGAGGACCGGGGTCCCATTGTGCACACCGACCACAGTGATTTGGTTCTTGAGGAAAAAGAGGCTCTGGAGACAAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000170152.8 |
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| CDS CCA 90 bp | TGGCACTCATACGATGCCTCATCTTCCAATTCCACAGGCTTAATGTaGAGGTCATGCTGGCCACTGGCTGAATTCCCCGATATCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WHSYDASSSNSTGLM*RSCWPLAEFPDIQY Trigger: GTACTGGATATCGGGGAATTCAGCCAGTGGCCAGCATGACCTCCACATTAAGCCTGTGGAATTGGAAGATGAGGCATCGTATGAGTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS-3UTR CAA 90 bp | GCAGATGGTCATATATCTTCTCTACTACTTCCATCCATATCCCTAGTTCCCATCCAACGACCTCCAACCTaGGCCCACGTGCCCCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ADGHISSLLLPSISLVPIQRPPT*AHVPQA Trigger: TGCTTGGGGCACGTGGGCCAAGGTTGGAGGTCGTTG...GATGGGAACTAGGGATATGGATGGAAGTAGTAGAGAAGATATATGACCATCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CCA 90 bp | GCTAAGGCTCACACTGACCCCTCGAACCCTGTAGTAACCGTTGGTTaGATCCTTTGTCTCCAGAGCCTCTTTTTCCTCAAGAACCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: AKAHTDPSNPVVTVG*ILCLQSLFFLKNQI Trigger: GATTTGGTTCTTGAGGAAAAAGAGGCTCTGGAGACAAAGGATCCAACCAACGGTTACTACAGGGTTCGAGGGGTCAGTGTGAGCCTTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000170152.8 |
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| CDS-3UTR CAA 90 bp | TTGTCCCTCTGCAAAGTATTTAGTCATTTAGTCACCATCTTGAATGTCTTTCTCGCGCTTCCGACCGCGTaGCTGACCTCGCAGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: LSLCKVFSHLVTILNVFLALPTA*LTSQDT Trigger: GGTGTCCTGCGAGGTCAGCAACGCGGTCGGAAGCGC...GAGAAAGACATTCAAGATGGTGACTAAATGACTAAATACTTTGCAGAGGGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CAA 90 bp | CCTGATGCTTGTAATGATCTTTCCCTCCTTCAATGTTCAGTTTTGGAGGGGTTGAAAGGCTGGTGCAGGTaGCAGGGCTGTCACTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PDACNDLSLLQCSVLEGLKGWCR*QGCHYR Trigger: CCTGTAGTGACAGCCCTGCAACCTGCACCAGCCTTT...CAACCCCTCCAAAACTGAACATTGAAGGAGGGAAAGATCATTACAAGCATCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CAA 90 bp | TGTACACCAACAGTCCTGATGCTTGTAATGATCTTTCCCTCCTTCAATGTTCAGACTGTTCCAGTGGCCTaGTCCTTCAGCGTGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CTPTVLMLVMIFPSFNVQTVPVA*SFSVVW Trigger: CCAGACCACGCTGAAGGACAAGGCCACTGGAACAGT...CTGAACATTGAAGGAGGGAAAGATCATTACAAGCATCAGGACTGTTGGTGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CAA 90 bp | TTGTCCCTCTGCAAAGTATTTAGTCATTTAGTCACCATCTTGAATGTCTTTCTCCCCTCTCCTAGCCGGTaGCGGGCACTGCAGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSLCKVFSHLVTILNVFLPSPSR*RALQLK Trigger: CTTCAACTGCAGTGCCCGCAACCGGCTAGGAGAGGG...GAGAAAGACATTCAAGATGGTGACTAAATGACTAAATACTTTGCAGAGGGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS-3UTR CAA 90 bp | TGCAGATGGTCATATATCTTCTCTACTACTTCCATCCATATCCCTAGTTCCCATTGTAGTAACCGTTGGTaGGATCCTTTGTCTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CRWSYIFSTTSIHIPSSHCSNRW*DPLSPE Trigger: CTCTGGAGACAAAGGATCCAACCAACGGTTACTACA...ATGGGAACTAGGGATATGGATGGAAGTAGTAGAGAAGATATATGACCATCTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS TCA 72 bp | GCGCGGTGCTGCGGTTGGCGCTTCCGACCGCGTTGCTaGCCTCGCAGGACACCGGCTCAGTCAGGAAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ARCCGWRFRPRC*PRRTPAQSGKW Trigger: CCACTTTCCTGACTGAGCCGGTGTCCTGCGAGGTCAGCAACGCGGTCGGAAGCGCCAACCGCAGCACCGCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 72 bp | CTTTCGCCCCCTAGAGCCAGCCCATCCTTAGTCCACTaGACGAGCCCCCTGTACGCGCCCAGAGCGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LSPPRASPSLVH*TSPLYAPRAQG Trigger: GCCCTGCGCTCTGGGCGCGTACAGGGGGCTCGTGCAGTGGACTAAGGATGGGCTGGCTCTAGGGGGCGAAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS GCA 72 bp | GCGTGGGCCCGGAGCTCAGCACCTGAGAGCCACCCATaGGGGTCCAGGTTATCCGTGGAAGTGGGTTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AWARSSAPESHP*GSRLSVEVGSR Trigger: GCGGGAACCCACTTCCACGGATAACCTGGACCCGCATGGGTGGCTCTCAGGTGCTGAGCTCCGGGCCCACGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 72 bp | CTCAGCCCTGCATACATAGTCGCCCGCATCCTCCAGTaGCACGGACGGAAGCCGCAGCGTGGGCCCGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LSPAYIVARILQ*HGRKPQRGPGA Trigger: AGCTCCGGGCCCACGCTGCGGCTTCCGTCCGTGGCACTGGAGGATGCGGGCGACTATGTATGCAGGGCTGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CAA 72 bp | ACAGGGGGTGCGTTCACAGTCAGCCTCGCCTGCGCTTaGCCGCCTCCCAGACCCGTTCTCCTCGGCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TGGAFTVSLACA*PPPRPVLLGSA Trigger: GGCTGAGCCGAGGAGAACGGGTCTGGGAGGCGGCAAAGCGCAGGCGAGGCTGACTGTGAACGCACCCCCTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS GCA 72 bp | TGCCGCCTCCCAGACCCGTTCTCCTCGGCTCAGCCCTaGATACATAGTCGCCCGCATCCTCCAGTGCCACGG | + |
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Preference number: 6 (lower is better) Translates to: CRLPDPFSSAQP*IHSRPHPPVPR Trigger: CCGTGGCACTGGAGGATGCGGGCGACTATGTATGCAGGGCTGAGCCGAGGAGAACGGGTCTGGGAGGCGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS GCA 72 bp | GTCACTACAGGGGGTGCGTTCACAGTCAGCCTCGCCTaGGCTTTGCCGCCTCCCAGACCCGTTCTCCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: VTTGGAFTVSLA*ALPPPRPVLLG Trigger: GCCGAGGAGAACGGGTCTGGGAGGCGGCAAAGCGCAGGCGAGGCTGACTGTGAACGCACCCCCTGTAGTGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CAA 72 bp | TCCAGCGCGGTGCTGCGGTTGGCGCTTCCGACCGCGTaGCTGACCTCGCAGGACACCGGCTCAGTCAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: SSAVLRLALPTA*LTSQDTGSVRK Trigger: TTTCCTGACTGAGCCGGTGTCCTGCGAGGTCAGCAACGCGGTCGGAAGCGCCAACCGCAGCACCGCGCTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CAA 90 bp | GCCTGCAGAATGGGTCCATACAACACTTCCAGCGCGGTGCTGCGGTaGGCGCTTCCGACCGCGTTGCTGACCTCGCAGGACACCGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ACRMGPYNTSSAVLR*ALPTALLTSQDTGS Trigger: TGAGCCGGTGTCCTGCGAGGTCAGCAACGCGGTCGGAAGCGCCAACCGCAGCACCGCGCTGGAAGTGTTGTATGGACCCATTCTGCAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CAA 90 bp | GCTGTCACTACAGGGGGTGCGTTCACAGTCAGCCTCGCCTGCGCTTaGCCGCCTCCCAGACCCGTTCTCCTCGGCTCAGCCCTGCATACA | + |
|
Preference number: 6 (lower is better) Translates to: AVTTGGAFTVSLACA*PPPRPVLLGSALHT Trigger: TGTATGCAGGGCTGAGCCGAGGAGAACGGGTCTGGGAGGCGGCAAAGCGCAGGCGAGGCTGACTGTGAACGCACCCCCTGTAGTGACAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS GCA 72 bp | GGTCGGTGTGCACAATGGGACCCCGGTCCTCACTGCTaGCTGTCTCCTCCTCAGGGCCACGTGAACTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GRCAQWDPGPHC*LSPPQGHVNWN Trigger: GTTCCAGTTCACGTGGCCCTGAGGAGGAGACAGGCAGCAGTGAGGACCGGGGTCCCATTGTGCACACCGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000170152.8 |
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| CDS CCA 72 bp | CACACACTGGAGGCGAGCAGGACCCCTCAGAAAGGCTaGTGCAGGTTGCAGGGCTGTCACTACAGGGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: HTLEASRTPQKG*CRLQGCHYRGC Trigger: GCACCCCCTGTAGTGACAGCCCTGCAACCTGCACCAGCCTTTCTGAGGGGTCCTGCTCGCCTCCAGTGTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CCA 72 bp | AGTAGGAGTCCCTGGGAGACCGATCGGAGAGGGCGGTaGCAAGAAGAGGCCTCCTCCAGGAGCTTCCCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRSPWETDRRGR*QEEASSRSFPK Trigger: CTTGGGGAAGCTCCTGGAGGAGGCCTCTTCTTGCCACCGCCCTCTCCGATCGGTCTCCCAGGGACTCCTACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000170152.8 |
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| CDS CAA 72 bp | ATGGGTCCATACAACACTTCCAGCGCGGTGCTGCGGTaGGCGCTTCCGACCGCGTTGCTGACCTCGCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: MGPYNTSSAVLR*ALPTALLTSQD Trigger: GTCCTGCGAGGTCAGCAACGCGGTCGGAAGCGCCAACCGCAGCACCGCGCTGGAAGTGTTGTATGGACCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CAA 90 bp | TACAACACTTCCAGCGCGGTGCTGCGGTTGGCGCTTCCGACCGCGTaGCTGACCTCGCAGGACACCGGCTCAGTCAGGAAAGTGGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: YNTSSAVLRLALPTA*LTSQDTGSVRKVAS Trigger: AGATGCCACTTTCCTGACTGAGCCGGTGTCCTGCGAGGTCAGCAACGCGGTCGGAAGCGCCAACCGCAGCACCGCGCTGGAAGTGTTGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 72 bp | CTCGCAGGACACCGGCTCAGTCAGGAAAGTGGCATCTaGAACGACCTCCAACCTTGGCCCACGTGCCCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LAGHRLSQESGI*NDLQPWPTCPK Trigger: CTTGGGGCACGTGGGCCAAGGTTGGAGGTCGTTGCAGATGCCACTTTCCTGACTGAGCCGGTGTCCTGCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 72 bp | ACACTGGAGGCGAGCAGGACCCCTCAGAAAGGCTGGTaGAGGTTGCAGGGCTGTCACTACAGGGGGTGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: TLEASRTPQKGW*RLQGCHYRGCV Trigger: AACGCACCCCCTGTAGTGACAGCCCTGCAACCTGCACCAGCCTTTCTGAGGGGTCCTGCTCGCCTCCAGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CCA 72 bp | AGAGCCACCCATGCGGGTCCAGGTTATCCGTGGAAGTaGGTTCCCGCGCCAGACACAGCTGAAGGAGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: RATHAGPGYPWK*VPAPDTAEGGI Trigger: GATGCCTCCTTCAGCTGTGTCTGGCGCGGGAACCCACTTCCACGGATAACCTGGACCCGCATGGGTGGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CCA 72 bp | CACCTGAGAGCCACCCATGCGGGTCCAGGTTATCCGTaGAAGTGGGTTCCCGCGCCAGACACAGCTGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HLRATHAGPGYP*KWVPAPDTAEG Trigger: TCCTTCAGCTGTGTCTGGCGCGGGAACCCACTTCCACGGATAACCTGGACCCGCATGGGTGGCTCTCAGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CAA 72 bp | ACTCGTCCCTCTCCTAGCCGGTTGCGGGCACTGCAGTaGAAGCCGGTGGTAAAGTCGGACTCCTGGGTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: TRPSPSRLRALQ*KPVVKSDSWVP Trigger: CGGAACCCAGGAGTCCGACTTTACCACCGGCTTCAACTGCAGTGCCCGCAACCGGCTAGGAGAGGGACGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CAA 90 bp | TCTCTACGGCCCAAGTGGATCTGGACTCGTCCCTCTCCTAGCCGGTaGCGGGCACTGCAGTTGAAGCCGGTGGTAAAGTCGGACTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLRPKWIWTRPSPSR*RALQLKPVVKSDSW Trigger: CCAGGAGTCCGACTTTACCACCGGCTTCAACTGCAGTGCCCGCAACCGGCTAGGAGAGGGACGAGTCCAGATCCACTTGGGCCGTAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS TCA 72 bp | TTATCCGTGGAAGTGGGTTCCCGCGCCAGACACAGCTaGAGGAGGCATCTTTCCCCACGTCCACGGACACGG | + |
|
Preference number: 6 (lower is better) Translates to: LSVEVGSRARHS*RRHLSPRPRTR Trigger: CCGTGTCCGTGGACGTGGGGAAAGATGCCTCCTTCAGCTGTGTCTGGCGCGGGAACCCACTTCCACGGATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 72 bp | TGTCCCTCCCTGTGGGCAGGGCCTGGCTTCGCGCTCTaGAGATCAAGGTGGCACCATCATCATGACTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CPSLWAGPGFAL*RSRWHHHHDWK Trigger: CTTCCAGTCATGATGATGGTGCCACCTTGATCTGCAGAGCGCGAAGCCAGGCCCTGCCCACAGGGAGGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CCA 72 bp | ACAGTAGGCAGCAAGTCTCTACGGCCCAAGTGGATCTaGACTCGTCCCTCTCCTAGCCGGTTGCGGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: TVGSKSLRPKWI*TRPSPSRLRAL Trigger: CAGTGCCCGCAACCGGCTAGGAGAGGGACGAGTCCAGATCCACTTGGGCCGTAGAGACTTGCTGCCTACTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CAA 72 bp | CCCAAGTGGATCTGGACTCGTCCCTCTCCTAGCCGGTaGCGGGCACTGCAGTTGAAGCCGGTGGTAAAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PKWIWTRPSPSR*RALQLKPVVKS Trigger: CGACTTTACCACCGGCTTCAACTGCAGTGCCCGCAACCGGCTAGGAGAGGGACGAGTCCAGATCCACTTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS GCA 72 bp | CCCTCGCTGCTTCCTGGGATCCGGACCAAGTTCTTTTaGTTAGAGAGAGAGCCATGGCGCCAGCAGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSLLPGIRTKFF*LEREPWRQQQR Trigger: CCTCTGCTGCTGGCGCCATGGCTCTCTCTCTAAGCAAAAGAACTTGGTCCGGATCCCAGGAAGCAGCGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CCA 72 bp | TCCACTGTTCCAGTGGCCTTGTCCTTCAGCGTGGTCTaGTGGAAGCTGCTCCCATCCAGCCGGATCCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: STVPVALSFSVV*WKLLPSSRIPS Trigger: AGATGGGATCCGGCTGGATGGGAGCAGCTTCCACCAGACCACGCTGAAGGACAAGGCCACTGGAACAGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CAA 90 bp | TGGATCTGGACTCGTCCCTCTCCTAGCCGGTTGCGGGCACTGCAGTaGAAGCCGGTGGTAAAGTCGGACTCCTGGGTTCCGGAAATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: WIWTRPSPSRLRALQ*KPVVKSDSWVPEMC Trigger: ACACATTTCCGGAACCCAGGAGTCCGACTTTACCACCGGCTTCAACTGCAGTGCCCGCAACCGGCTAGGAGAGGGACGAGTCCAGATCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CAA 90 bp | CTGGAAGGGGTCAGGAATAAGGTGTTTTCCACTGTTCCAGTGGCCTaGTCCTTCAGCGTGGTCTGGTGGAAGCTGCTCCCATCCAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LEGVRNKVFSTVPVA*SFSVVWWKLLPSSR Trigger: CCGGCTGGATGGGAGCAGCTTCCACCAGACCACGCTGAAGGACAAGGCCACTGGAACAGTGGAAAACACCTTATTCCTGACCCCTTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 72 bp | ACGTGCAGTTGGGCTGGTCGTGATCGGAGACCTGCTTaGGAAGCCTGGCACTCATACGATGCCTCATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TCSWAGRDRRPA*EAWHSYDASSS Trigger: GGAAGATGAGGCATCGTATGAGTGCCAGGCTTCGCAAGCAGGTCTCCGATCACGACCAGCCCAACTGCACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 72 bp | CGACTCCGACAGGTCAGATTTCCAGGAACCATCACGTaGAGTTGGGCTGGTCGTGATCGGAGACCTGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RLRQVRFPGTIT*SWAGRDRRPAC Trigger: GCAAGCAGGTCTCCGATCACGACCAGCCCAACTGCACGTGATGGTTCCTGGAAATCTGACCTGTCGGAGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169893.3 |
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| CDS CCA 72 bp | TGTTTTCCACTGTTCCAGTGGCCTTGTCCTTCAGCGTaGTCTGGTGGAAGCTGCTCCCATCCAGCCGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: CFPLFQWPCPSA*SGGSCSHPAGS Trigger: GGATCCGGCTGGATGGGAGCAGCTTCCACCAGACCACGCTGAAGGACAAGGCCACTGGAACAGTGGAAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CCA 72 bp | CGACAGGTCAGATTTCCAGGAACCATCACGTGCAGTTaGGCTGGTCGTGATCGGAGACCTGCTTGCGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RQVRFPGTITCS*AGRDRRPACEA Trigger: GGCTTCGCAAGCAGGTCTCCGATCACGACCAGCCCAACTGCACGTGATGGTTCCTGGAAATCTGACCTGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169893.3 |
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| CDS CAA 72 bp | ACCCTCGCTGCTTCCTGGGATCCGGACCAAGTTCTTTaGCTTAGAGAGAGAGCCATGGCGCCAGCAGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TLAASWDPDQVL*LRERAMAPAAE Trigger: CTCTGCTGCTGGCGCCATGGCTCTCTCTCTAAGCAAAAGAACTTGGTCCGGATCCCAGGAAGCAGCGAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS TCA 72 bp | TGGGGCTCAGCAGACAGAGTCACCATTGGGGGATACTaGAGGCTCAGTGTAACAGCTGTGTCCCTCCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: WGSADRVTIGGY*RLSVTAVSLPV Trigger: CACAGGGAGGGACACAGCTGTTACACTGAGCCTTCAGTATCCCCCAATGGTGACTCTGTCTGCTGAGCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 72 bp | TTCCCCACGTCCACGGACACGGACTTAGGTTTTGCCTaGAGAATGGGTCCATACAACACTTCCAGCGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: FPTSTDTDLGFA*RMGPYNTSSAV Trigger: CACCGCGCTGGAAGTGTTGTATGGACCCATTCTGCAGGCAAAACCTAAGTCCGTGTCCGTGGACGTGGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS GCA 72 bp | GACCACTCCAGTGATGACCATAAGGAGAGAGGTGGCTaGAGATGCTGCACCAGCCACAATCCGGACAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: DHSSDDHKERGG*RCCTSHNPDSR Trigger: CCTACTGTCCGGATTGTGGCTGGTGCAGCATCTGCAGCCACCTCTCTCCTTATGGTCATCACTGGAGTGGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS TCA 72 bp | ATTTCCAGGAACCATCACGTGCAGTTGGGCTGGTCGTaGTCGGAGACCTGCTTGCGAAGCCTGGCACTCATA | + |
|
Preference number: 6 (lower is better) Translates to: ISRNHHVQLGWS*SETCLRSLALI Trigger: TATGAGTGCCAGGCTTCGCAAGCAGGTCTCCGATCACGACCAGCCCAACTGCACGTGATGGTTCCTGGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169893.3 |
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| CDS CCA 72 bp | TGGGCTGGTCGTGATCGGAGACCTGCTTGCGAAGCCTaGCACTCATACGATGCCTCATCTTCCAATTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: WAGRDRRPACEA*HSYDASSSNST Trigger: TGTGGAATTGGAAGATGAGGCATCGTATGAGTGCCAGGCTTCGCAAGCAGGTCTCCGATCACGACCAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CCA 72 bp | CAGATGTGGCTTGAAGTCATAGTAAGTAGGAGTCCCTaGGAGACCGATCGGAGAGGGCGGTGGCAAGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QMWLEVIVSRSP*ETDRRGRWQEE Trigger: CTCTTCTTGCCACCGCCCTCTCCGATCGGTCTCCCAGGGACTCCTACTTACTATGACTTCAAGCCACATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000170152.8 |
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| CDS CCA 72 bp | AAGGGGTCAGGAATAAGGTGTTTTCCACTGTTCCAGTaGCCTTGTCCTTCAGCGTGGTCTGGTGGAAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KGSGIRCFPLFQ*PCPSAWSGGSC Trigger: GCAGCTTCCACCAGACCACGCTGAAGGACAAGGCCACTGGAACAGTGGAAAACACCTTATTCCTGACCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CCA 72 bp | TCCAGAGCCTCTTTTTCCTCAAGAACCAAATCACTGTaGTCGGTGTGCACAATGGGACCCCGGTCCTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SRASFSSRTKSL*SVCTMGPRSSL Trigger: CAGTGAGGACCGGGGTCCCATTGTGCACACCGACCACAGTGATTTGGTTCTTGAGGAAAAAGAGGCTCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000170152.8 |
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| CDS CAA 72 bp | TGTTGTAGGAAATGGGGCGATGAGCCTGCATGTCCTTaGAAACAGCAAAGGAAAACGAGGAGGGCGGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CCRKWGDEPACP*KQQRKTRRAEA Trigger: GGCCTCCGCCCTCCTCGTTTTCCTTTGCTGTTTCAAAGGACATGCAGGCTCATCGCCCCATTTCCTACAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CCA 72 bp | GCACTGCAGTTGAAGCCGGTGGTAAAGTCGGACTCCTaGGTTCCGGAAATGTGTAGCACAGAAATAAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALQLKPVVKSDS*VPEMCSTEIRP Trigger: TGGCCTTATTTCTGTGCTACACATTTCCGGAACCCAGGAGTCCGACTTTACCACCGGCTTCAACTGCAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CCA 72 bp | AACAGCACCACCATGTCCTCTGGCTGTTGTAGGAAATaGGGCGATGAGCCTGCATGTCCTTTGAAACAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: NSTTMSSGCCRK*GDEPACPLKQQ Trigger: TTGCTGTTTCAAAGGACATGCAGGCTCATCGCCCCATTTCCTACAACAGCCAGAGGACATGGTGGTGCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045817.14 |
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| CDS CCA 72 bp | TACGATGCCTCATCTTCCAATTCCACAGGCTTAATGTaGAGGTCATGCTGGCCACTGGCTGAATTCCCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: YDASSSNSTGLM*RSCWPLAEFPD Trigger: ATCGGGGAATTCAGCCAGTGGCCAGCATGACCTCCACATTAAGCCTGTGGAATTGGAAGATGAGGCATCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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| CDS CCA 72 bp | CACACTGACCCCTCGAACCCTGTAGTAACCGTTGGTTaGATCCTTTGTCTCCAGAGCCTCTTTTTCCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: HTDPSNPVVTVG*ILCLQSLFFLK Trigger: CTTGAGGAAAAAGAGGCTCTGGAGACAAAGGATCCAACCAACGGTTACTACAGGGTTCGAGGGGTCAGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000170152.8 |
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| CDS GCA 72 bp | TCATCTTCCAATTCCACAGGCTTAATGTGGAGGTCATaGTGGCCACTGGCTGAATTCCCCGATATCCAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSNSTGLMWRS*WPLAEFPDIQY Trigger: GTACTGGATATCGGGGAATTCAGCCAGTGGCCAGCATGACCTCCACATTAAGCCTGTGGAATTGGAAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045817.14 ENSMUST00000169893.3 |
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