Pregenerated sensors for KIR3DL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031424Ensembl transcript IDs: ENSMUST00000113104.8, ENSMUST00000113105.3
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TCCATGTACACAATGGTATCTGCAGAAAACTCAGAAATTCGGGAAATGGGAGGCGGTCATGGTCTCTCCTaGCATCATCAGCACAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SMYTMVSAENSEIREMGGGHGLS*HHQHRA Trigger: GGCCCTGTGCTGATGATGTCAGGAGAGACCATGACC...GCCTCCCATTTCCCGAATTTCTGAGTTTTCTGCAGATACCATTGTGTACATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS-3UTR GCA 90 bp | TCCATGTACACAATGGTATCTGCAGAAAACTCAGAAATTCGGGAAATGGGAGGCACTGATGGTCAGAGATaGAAGACAGGGTCATGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SMYTMVSAENSEIREMGGTDGQR*KTGSWS Trigger: AGACCATGACCCTGTCTTGCATCTCTGACCATCAGT...GCCTCCCATTTCCCGAATTTCTGAGTTTTCTGCAGATACCATTGTGTACATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS-3UTR TCA 90 bp | CAAAAGACTTCCTTAGATCTTTCTTTGAGAACTCAGAGGGTGCAGACATTCTTTGGGGTCACTGGAGTCTaGCCATTCATAGGGGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: QKTSLDLSLRTQRVQTFFGVTGV*PFIGVV Trigger: TACTACCCCTATGAATGGTCAGACTCCAGTGACCCC...AAAGAATGTCTGCACCCTCTGAGTTCTCAAAGAAAGATCTAAGGAAGTCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS-3UTR GCA 90 bp | CATAATTTCCATGTACACAATGGTATCTGCAGAAAACTCAGAAATTCGGGAAATTTACCACTGTGGCTCTaGACTGCAGGCATCCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: HNFHVHNGICRKLRNSGNLPLWL*TAGIPC Trigger: ACAGGGGATGCCTGCAGTGCAGAGCCACAGTGGTAA...ATTTCCCGAATTTCTGAGTTTTCTGCAGATACCATTGTGTACATGGAAATTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS-3UTR CCA 90 bp | CAAAAGACTTCCTTAGATCTTTCTTTGAGAACTCAGAGGGTGCAGACATTCTTTTGTCAATGGGGTCACTaGAGTCTGACCATTCATAGG | + |
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Preference number: 4 (lower is better) Translates to: QKTSLDLSLRTQRVQTFFCQWGH*SLTIHR Trigger: CCTATGAATGGTCAGACTCCAGTGACCCCATTGACA...AAAGAATGTCTGCACCCTCTGAGTTCTCAAAGAAAGATCTAAGGAAGTCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS-3UTR GCA 90 bp | TCCATGTACACAATGGTATCTGCAGAAAACTCAGAAATTCGGGAAATGGGAGGCTGGTTGAAGATTCTCTaGTCAAGTTCTGTGTATGTA | + |
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Preference number: 4 (lower is better) Translates to: SMYTMVSAENSEIREMGGWLKIL*SSSVYV Trigger: TACATACACAGAACTTGAGCAGAGAATCTTCAACCA...GCCTCCCATTTCCCGAATTTCTGAGTTTTCTGCAGATACCATTGTGTACATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS-3UTR CCA 90 bp | CATAATTTCCATGTACACAATGGTATCTGCAGAAAACTCAGAAATTCGGGAAATTCGAATTTACCACTGTaGCTCTGCACTGCAGGCATC | + |
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Preference number: 4 (lower is better) Translates to: HNFHVHNGICRKLRNSGNSNLPL*LCTAGI Trigger: GATGCCTGCAGTGCAGAGCCACAGTGGTAAATTCGA...ATTTCCCGAATTTCTGAGTTTTCTGCAGATACCATTGTGTACATGGAAATTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS-3UTR CCA 90 bp | CAAAAGACTTCCTTAGATCTTTCTTTGAGAACTCAGAGGGTGCAGACATTCTTTAGGAATGGTTTATCATaGCTTCCCAAGTGTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: QKTSLDLSLRTQRVQTFFRNGLS*LPKCAD Trigger: GTCAGCACACTTGGGAAGCCATGATAAACCATTCCT...AAAGAATGTCTGCACCCTCTGAGTTCTCAAAGAAAGATCTAAGGAAGTCTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS-3UTR GCA 90 bp | CATTTCATAATTTCCATGTACACAATGGTATCTGCAGAAAACTCAGAAATTCGGATCTGCTTCTGTGTATaGAGGACAGTTTCCTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: HFIISMYTMVSAENSEIRICFCV*RTVSFG Trigger: GCCAAAGGAAACTGTCCTGCATACACAGAAGCAGAT...CCGAATTTCTGAGTTTTCTGCAGATACCATTGTGTACATGGAAATTATGAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS-3UTR GCA 90 bp | CATAATTTCCATGTACACAATGGTATCTGCAGAAAACTCAGAAATTCGGGAAATCATACTCTTGTTCCATaGTGGCTGCTGCTTGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: HNFHVHNGICRKLRNSGNHTLVP*WLLLVS Trigger: AGAAACAAGCAGCAGCCAGCATGGAACAAGAGTATG...ATTTCCCGAATTTCTGAGTTTTCTGCAGATACCATTGTGTACATGGAAATTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS TCA 90 bp | TGTAAGTCCCAACAAGGTCAGGTGTCATGGGACCTATTGAGTAGCTaGCATGTGACCCACTTTCATGATGTTCTGCAGAAACTTGGACAG | + |
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Preference number: 5 (lower is better) Translates to: CKSQQGQVSWDLLSS*HVTHFHDVLQKLGQ Trigger: CTGTCCAAGTTTCTGCAGAACATCATGAAAGTGGGTCACATGTCAGCTACTCAATAGGTCCCATGACACCTGACCTTGTTGGGACTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113104.8 ENSMUST00000113105.3 |
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| CDS-3UTR CAA 90 bp | TCCATGTACACAATGGTATCTGCAGAAAACTCAGAAATTCGGGAAATGGGAGGCCATGTAACTGATGGTTaGGAGACCCTTCTTCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: SMYTMVSAENSEIREMGGHVTDG*ETLLLC Trigger: ACAAAGAAGAAGGGTCTCCAAACCATCAGTTACATG...GCCTCCCATTTCCCGAATTTCTGAGTTTTCTGCAGATACCATTGTGTACATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS CCA 90 bp | GTTCCTGAAAGAGCCATAGCATCTATAGTTCCCTTTTTGGATCATTaGACTAAGAAGGAATTTTGCCTCGAATTTACCACTGTGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: VPERAIASIVPFLDH*TKKEFCLEFTTVAL Trigger: CAGAGCCACAGTGGTAAATTCGAGGCAAAATTCCTTCTTAGTCCAATGATCCAAAAAGGGAACTATAGATGCTATGGCTCTTTCAGGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113104.8 ENSMUST00000113105.3 |
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| CDS-3UTR CAA 90 bp | TCCATGTACACAATGGTATCTGCAGAAAACTCAGAAATTCGGGAAATGGGAGGCGGAGACCCTTCTTCTTaGTACAGCTTGAATATGTTA | + |
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Preference number: 5 (lower is better) Translates to: SMYTMVSAENSEIREMGGGDPSS*YSLNML Trigger: TAACATATTCAAGCTGTACAAAGAAGAAGGGTCTCC...GCCTCCCATTTCCCGAATTTCTGAGTTTTCTGCAGATACCATTGTGTACATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS-3UTR CAA 90 bp | CATTTCATAATTTCCATGTACACAATGGTATCTGCAGAAAACTCAGAAATTCGGGAGGAACAACATAACTaGGCCAGGCAGATAGGAATG | + |
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Preference number: 5 (lower is better) Translates to: HFIISMYTMVSAENSEIREEQHN*ARQIGM Trigger: CATTCCTATCTGCCTGGCCAAGTTATGTTGTTCCTC...CCGAATTTCTGAGTTTTCTGCAGATACCATTGTGTACATGGAAATTATGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS-3UTR CAA 90 bp | CATTTCATAATTTCCATGTACACAATGGTATCTGCAGAAAACTCAGAAATTCGGTTCCTGCATGTTCTGTaGTCACAGGACCAAAGACCT | + |
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Preference number: 5 (lower is better) Translates to: HFIISMYTMVSAENSEIRFLHVL*SQDQRP Trigger: AGGTCTTTGGTCCTGTGACAACAGAACATGCAGGAA...CCGAATTTCTGAGTTTTCTGCAGATACCATTGTGTACATGGAAATTATGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS-3UTR CAA 90 bp | CATTTCATAATTTCCATGTACACAATGGTATCTGCAGAAAACTCAGAAATTCGGTTTAACTTCATACTCTaGTTCCATGCTGGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: HFIISMYTMVSAENSEIRFNFIL*FHAGCC Trigger: GCAGCAGCCAGCATGGAACAAGAGTATGAAGTTAAA...CCGAATTTCTGAGTTTTCTGCAGATACCATTGTGTACATGGAAATTATGAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS-3UTR CAA 90 bp | CATAATTTCCATGTACACAATGGTATCTGCAGAAAACTCAGAAATTCGGGAAATTATATACCTGTGATCTaGATGTCAATGGGGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: HNFHVHNGICRKLRNSGNYIPVI*MSMGSL Trigger: CAGTGACCCCATTGACATCAAGATCACAGGTATATA...ATTTCCCGAATTTCTGAGTTTTCTGCAGATACCATTGTGTACATGGAAATTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS-3UTR CAA 90 bp | CAAAAGACTTCCTTAGATCTTTCTTTGAGAACTCAGAGGGTGCAGACATTCTTTGGTTCTTGTAGTTATTaGTTTTGGTATCTGCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: QKTSLDLSLRTQRVQTFFGSCSY*FWYLLL Trigger: CAGAAGCAGATACCAAAACAAATAACTACAAGAACC...AAAGAATGTCTGCACCCTCTGAGTTCTCAAAGAAAGATCTAAGGAAGTCTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS-3UTR CAA 90 bp | CATAATTTCCATGTACACAATGGTATCTGCAGAAAACTCAGAAATTCGGGAAATTCTATAGTTCCCTTTTaGGATCATTGGACTAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: HNFHVHNGICRKLRNSGNSIVPF*DHWTKK Trigger: CTTCTTAGTCCAATGATCCAAAAAGGGAACTATAGA...ATTTCCCGAATTTCTGAGTTTTCTGCAGATACCATTGTGTACATGGAAATTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS CCA 72 bp | TGGTATCTGCTTCTGTGTATGCAGGACAGTTTCCTTTaGCAGGAAGGTACAAGGGGTCACTTGGGGAGGACC | + |
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Preference number: 6 (lower is better) Translates to: WYLLLCMQDSFL*QEGTRGHLGRT Trigger: GGTCCTCCCCAAGTGACCCCTTGTACCTTCCTGCCAAAGGAAACTGTCCTGCATACACAGAAGCAGATACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113104.8 ENSMUST00000113105.3 |
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| CDS CCA 72 bp | GGTTTATCATGGCTTCCCAAGTGTGCTGACATCCTCTaGACTAGGAAGAAACCAGAACACACGAGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: GLSWLPKCADIL*TRKKPEHTRLR Trigger: CCTCAGCCTCGTGTGTTCTGGTTTCTTCCTAGTCCAGAGGATGTCAGCACACTTGGGAAGCCATGATAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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| CDS CAA 72 bp | TTGGTATCTGCTTCTGTGTATGCAGGACAGTTTCCTTaGGCAGGAAGGTACAAGGGGTCACTTGGGGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LVSASVYAGQFP*AGRYKGSLGED Trigger: GTCCTCCCCAAGTGACCCCTTGTACCTTCCTGCCAAAGGAAACTGTCCTGCATACACAGAAGCAGATACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113104.8 ENSMUST00000113105.3 |
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| CDS TCA 72 bp | GGTCACTTGGGGAGGACCACACATGGGAAGCGTTCCTaGAAGAGCCATAGCATCTATAGTTCCCTTTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: GHLGRTTHGKRS*KSHSIYSSLFG Trigger: TCCAAAAAGGGAACTATAGATGCTATGGCTCTTTCAGGAACGCTTCCCATGTGTGGTCCTCCCCAAGTGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113104.8 ENSMUST00000113105.3 |
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| CDS TCA 72 bp | CAACAAGGTCAGGTGTCATGGGACCTATTGAGTAGCTaGCATGTGACCCACTTTCATGATGTTCTGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: QQGQVSWDLLSS*HVTHFHDVLQK Trigger: TTTCTGCAGAACATCATGAAAGTGGGTCACATGTCAGCTACTCAATAGGTCCCATGACACCTGACCTTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113104.8 ENSMUST00000113105.3 |
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| CDS GCA 72 bp | AATGTGCAGGTTCTTGTAGTTATTTGTTTTGGTATCTaGTTCTGTGTATGCAGGACAGTTTCCTTTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: NVQVLVVICFGI*FCVCRTVSFGR Trigger: CCTGCCAAAGGAAACTGTCCTGCATACACAGAAGCAGATACCAAAACAAATAACTACAAGAACCTGCACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113104.8 ENSMUST00000113105.3 |
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| CDS GCA 72 bp | TGTGTTTTTAACTTCATACTCTTGTTCCATGCTGGCTaGTGCTTGTTTCTGAGACTTATTCTGTTTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: CVFNFILLFHAG*CLFLRLILFGE Trigger: TTCTCCAAACAGAATAAGTCTCAGAAACAAGCAGCAGCCAGCATGGAACAAGAGTATGAAGTTAAAAACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113104.8 ENSMUST00000113105.3 |
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| CDS CCA 72 bp | AGAGCCATAGCATCTATAGTTCCCTTTTTGGATCATTaGACTAAGAAGGAATTTTGCCTCGAATTTACCACT | + |
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Preference number: 6 (lower is better) Translates to: RAIASIVPFLDH*TKKEFCLEFTT Trigger: AGTGGTAAATTCGAGGCAAAATTCCTTCTTAGTCCAATGATCCAAAAAGGGAACTATAGATGCTATGGCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113104.8 ENSMUST00000113105.3 |
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| CDS TCA 72 bp | TCAAGAGGAAAGGCTTCATGTAGATTCCTGAAATTATaGTTTTCAGAGGCTCACTATGTGCTGACAATACAT | + |
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Preference number: 6 (lower is better) Translates to: SRGKASCRFLKL*FSEAHYVLTIH Trigger: ATGTATTGTCAGCACATAGTGAGCCTCTGAAAATCATAATTTCAGGAATCTACATGAAGCCTTTCCTCTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113105.3 |
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