Pregenerated sensors for KIFC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079553Ensembl transcript IDs: ENSMUST00000114361.9, ENSMUST00000173386.2, ENSMUST00000173492.9, ENSMUST00000173982.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR GCA 90 bp | ATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACAGCATGCGCACTGGCTTaGAAGGGAATCAGGCTCTGG | + |
Preference number: 2 (lower is better) Translates to: IVHPIKSCLNSHPPPPNTACALA*KGIRLW Trigger: CCAGAGCCTGATTCCCTTGCAAGCCAGTGCGCATGC...TGTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 ENSMUST00000173982.2 |
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3UTR-3UTR CCA 90 bp | AAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAAGAGACGCATGCGCACTaGCTTGCAAGGGAATCAGGC | + |
Preference number: 2 (lower is better) Translates to: KYCSPNKIMSQLPPTPTEETHAH*LARESG Trigger: GCCTGATTCCCTTGCAAGCCAGTGCGCATGCGTCTC...TTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 ENSMUST00000173982.2 |
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3UTR-3UTR GCA 90 bp | TACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCGCATGCGCACTGGCTTaGAAGGGAATCAGGCTCTGG | + |
Preference number: 2 (lower is better) Translates to: YIINIVHPIKSCLNSHPPACALA*KGIRLW Trigger: CCAGAGCCTGATTCCCTTGCAAGCCAGTGCGCATGC...GGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 ENSMUST00000173982.2 |
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3UTR-3UTR GCA 90 bp | TTACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCGCATGCGCACTGGCTTaGAAGGGAATCAGGCTCTGG | + |
Preference number: 2 (lower is better) Translates to: LHNKYCSPNKIMSQLPPTACALA*KGIRLW Trigger: CCAGAGCCTGATTCCCTTGCAAGCCAGTGCGCATGC...GGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 ENSMUST00000173982.2 |
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3UTR CCA 72 bp | CACCGAATACACACTAAAACAGAGACGCATGCGCACTaGCTTGCAAGGGAATCAGGCTCTGGATCCGACTTC | + |
Preference number: 3 (lower is better) Translates to: HRIHTKTETHAH*LARESGSGSDF Trigger: GAAGTCGGATCCAGAGCCTGATTCCCTTGCAAGCCAGTGCGCATGCGTCTCTGTTTTAGTGTGTATTCGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173982.2 |
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CDS-3UTR TCA 90 bp | CCACCCACCCCCACCGAATACACACTAAAACAGAGACGCATGCGCACTGGCTTGGCTCCTGGACCTCTCTaGGTTGCTCCCGAAGACCCC | + |
Preference number: 4 (lower is better) Translates to: PPTPTEYTLKQRRMRTGLAPGPL*VAPEDP Trigger: GGGGTCTTCGGGAGCAACTCAGAGAGGTCCAGGAGC...CAAGCCAGTGCGCATGCGTCTCTGTTTTAGTGTGTATTCGGTGGGGGTGGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | CCACCCACCCCCACCGAATACACACTAAAACAGAGACGCATGCGCACTGGCTTGGTGCTCCGCTCCTCCTaGAATTGCAGCCGCTCTCCC | + |
Preference number: 4 (lower is better) Translates to: PPTPTEYTLKQRRMRTGLVLRSS*NCSRSP Trigger: GGGAGAGCGGCTGCAATTGCAGGAGGAGCGGAGCAC...CAAGCCAGTGCGCATGCGTCTCTGTTTTAGTGTGTATTCGGTGGGGGTGGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | CCACCCACCCCCACCGAATACACACTAAAACAGAGACGCATGCGCACTGGCTTGGCTGCTTCTGTGGCCTaGAACCTCCTCTCCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: PPTPTEYTLKQRRMRTGLAASVA*NLLSCS Trigger: GGAGCAGGAGAGGAGGTTTCAGGCCACAGAAGCAGC...CAAGCCAGTGCGCATGCGTCTCTGTTTTAGTGTGTATTCGGTGGGGGTGGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | CCACCCACCCCCACCGAATACACACTAAAACAGAGACGCATGCGCACTGGCTTGCAGGAGCAGTGGATGTaGCAGGCTTCTGGGCAGGAG | + |
Preference number: 4 (lower is better) Translates to: PPTPTEYTLKQRRMRTGLQEQWM*QASGQE Trigger: CTCCTGCCCAGAAGCCTGGCACATCCACTGCTCCTG...CAAGCCAGTGCGCATGCGTCTCTGTTTTAGTGTGTATTCGGTGGGGGTGGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CCA 90 bp | CCACCCACCCCCACCGAATACACACTAAAACAGAGACGCATGCGCACTGGCTTGAGGAGCAGCGGGAACTaGCTTCTGGCTCCTCAGCAC | + |
Preference number: 4 (lower is better) Translates to: PPTPTEYTLKQRRMRTGLRSSGN*LLAPQH Trigger: GTGCTGAGGAGCCAGAAGCCAGTTCCCGCTGCTCCT...CAAGCCAGTGCGCATGCGTCTCTGTTTTAGTGTGTATTCGGTGGGGGTGGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CCA 90 bp | CCACCCACCCCCACCGAATACACACTAAAACAGAGACGCATGCGCACTGGCTTGATCAGCCCTTCCAATTaGGGGTCTCCCCTAGGCCCT | + |
Preference number: 4 (lower is better) Translates to: PPTPTEYTLKQRRMRTGLISPSN*GSPLGP Trigger: AGGGCCTAGGGGAGACCCCCAATTGGAAGGGCTGAT...CAAGCCAGTGCGCATGCGTCTCTGTTTTAGTGTGTATTCGGTGGGGGTGGGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | CCCACCCCCACCGAATACACACTAAAACAGAGACGCATGCGCACTGGCTTGCAAGCTGGGTGCTCAGTGTaGTCCGCTCCTCCTGCAATT | + |
Preference number: 4 (lower is better) Translates to: PTPTEYTLKQRRMRTGLQAGCSV*SAPPAI Trigger: AATTGCAGGAGGAGCGGAGCACACTGAGCACCCAGC...TTGCAAGCCAGTGCGCATGCGTCTCTGTTTTAGTGTGTATTCGGTGGGGGTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CCA 90 bp | CCACCCACCCCCACCGAATACACACTAAAACAGAGACGCATGCGCACTGGCTTGCCATCCAGTGCTGACTaGACAAGCATGGCGATCTCC | + |
Preference number: 4 (lower is better) Translates to: PPTPTEYTLKQRRMRTGLPSSAD*TSMAIS Trigger: GGAGATCGCCATGCTTGTCCAGTCAGCACTGGATGG...CAAGCCAGTGCGCATGCGTCTCTGTTTTAGTGTGTATTCGGTGGGGGTGGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | TGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACACAGTGGCCCTGGGTCTGTaGCACTGTGCTGAGGAGTGG | + |
Preference number: 4 (lower is better) Translates to: CSPNKIMSQLPPTPTEYTVALGL*HCAEEW Trigger: CCACTCCTCAGCACAGTGTCACAGACCCAGGGCCAC...TGTGTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | TGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACACAGGTCAGGACCCCTCTTaGGCCTGCTTGCTGACAGGG | + |
Preference number: 4 (lower is better) Translates to: CSPNKIMSQLPPTPTEYTGQDPS*ACLLTG Trigger: CCCTGTCAGCAAGCAGGCTCAAGAGGGGTCCTGACC...TGTGTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | CCCACCCCCACCGAATACACACTAAAACAGAGACGCATGCGCACTGGCTTGCAACCACCTCTTCTTGGCTaGTTGACAGAGCTGCTTCTG | + |
Preference number: 4 (lower is better) Translates to: PTPTEYTLKQRRMRTGLQPPLLG*LTELLL Trigger: CAGAAGCAGCTCTGTCAAGCAGCCAAGAAGAGGTGG...TTGCAAGCCAGTGCGCATGCGTCTCTGTTTTAGTGTGTATTCGGTGGGGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | CCCACCCCCACCGAATACACACTAAAACAGAGACGCATGCGCACTGGCTTGCAATTGCCCTTCAGTTCCTaGAGCTGGTTGTGGAGTCGT | + |
Preference number: 4 (lower is better) Translates to: PTPTEYTLKQRRMRTGLQLPFSS*SWLWSR Trigger: ACGACTCCACAACCAGCTGCAGGAACTGAAGGGCAA...TTGCAAGCCAGTGCGCATGCGTCTCTGTTTTAGTGTGTATTCGGTGGGGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CCA 90 bp | CCACCCACCCCCACCGAATACACACTAAAACAGAGACGCATGCGCACTGGCTTGGATGATCTCTTATTTTaGGCAGTGTGGGCCACAGCC | + |
Preference number: 4 (lower is better) Translates to: PPTPTEYTLKQRRMRTGLDDLLF*AVWATA Trigger: GGCTGTGGCCCACACTGCCCAAAATAAGAGATCATC...CAAGCCAGTGCGCATGCGTCTCTGTTTTAGTGTGTATTCGGTGGGGGTGGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | TATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACCCCAGGGTCGTGGCCTaGTCCTGGACCTCTCTGAGT | + |
Preference number: 4 (lower is better) Translates to: YCSPNKIMSQLPPTPTEYPRVVA*SWTSLS Trigger: ACTCAGAGAGGTCCAGGAGCAGGCCACGACCCTGGG...GTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CCA 90 bp | TATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACTCCTGCTCCTCCAGCTaGGTGCTCAGTGTGCTCCGC | + |
Preference number: 4 (lower is better) Translates to: YCSPNKIMSQLPPTPTEYSCSSS*VLSVLR Trigger: GCGGAGCACACTGAGCACCCAGCTGGAGGAGCAGGA...GTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | AAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAAGTGGCCCTGGGTCTGTaGCACTGTGCTGAGGAGTGG | + |
Preference number: 4 (lower is better) Translates to: KYCSPNKIMSQLPPTPTEVALGL*HCAEEW Trigger: CCACTCCTCAGCACAGTGTCACAGACCCAGGGCCAC...TTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | AATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATGCTCCTGGACCTCTCTaGGTTGCTCCCGAAGACCCC | + |
Preference number: 4 (lower is better) Translates to: NIVHPIKSCLNSHPPPPNAPGPL*VAPEDP Trigger: GGGGTCTTCGGGAGCAACTCAGAGAGGTCCAGGAGC...ATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | CCACCCACCCCCACCGAATACACACTAAAACAGAGACGCATGCGCACTGGCTTGAGCTGGAACACACTATaGCTGCGTGATGATCTCTTA | + |
Preference number: 4 (lower is better) Translates to: PPTPTEYTLKQRRMRTGLSWNTL*LRDDLL Trigger: TAAGAGATCATCACGCAGTCATAGTGTGTTCCAGCT...CAAGCCAGTGCGCATGCGTCTCTGTTTTAGTGTGTATTCGGTGGGGGTGGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | ATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACAAGGGCCTTTCTGAGCTaGAGTGTGGCCCTGGGTCTG | + |
Preference number: 4 (lower is better) Translates to: IVHPIKSCLNSHPPPPNTRAFLS*SVALGL Trigger: CAGACCCAGGGCCACACTGCAGCTCAGAAAGGCCCT...TGTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | AATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATGTGCTCCGCTCCTCCTaGAATTGCAGCCGCTCTCCC | + |
Preference number: 4 (lower is better) Translates to: NIVHPIKSCLNSHPPPPNVLRSS*NCSRSP Trigger: GGGAGAGCGGCTGCAATTGCAGGAGGAGCGGAGCAC...ATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | AAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAAGCTCCTCCAGCTGGGTaGTCAGTGTGCTCCGCTCCT | + |
Preference number: 4 (lower is better) Translates to: KYCSPNKIMSQLPPTPTEAPPAG*SVCSAP Trigger: AGGAGCGGAGCACACTGAGCACCCAGCTGGAGGAGC...TTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | ATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACAAGCCTCTGCTGGTCCTaGTCAGCTCGGCTGCGTACA | + |
Preference number: 4 (lower is better) Translates to: IVHPIKSCLNSHPPPPNTSLCWS*SARLRT Trigger: TGTACGCAGCCGAGCTGAGCAGGACCAGCAGAGGCT...TGTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173492.9 |
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CDS-3UTR CCA 90 bp | TATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACGCTGCAGTGTGGCCCTaGGTCTGTGACACTGTGCTG | + |
Preference number: 4 (lower is better) Translates to: YCSPNKIMSQLPPTPTEYAAVWP*VCDTVL Trigger: CAGCACAGTGTCACAGACCCAGGGCCACACTGCAGC...GTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CCA 90 bp | ATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACATCCTGCAGCTGGTTGTaGAGTCGTCGCCGCTCCATC | + |
Preference number: 4 (lower is better) Translates to: IVHPIKSCLNSHPPPPNTSCSWL*SRRRSI Trigger: GATGGAGCGGCGACGACTCCACAACCAGCTGCAGGA...TGTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | TATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACTTCTTAGGGCCTTTCTaGGCTGCAGTGTGGCCCTGG | + |
Preference number: 4 (lower is better) Translates to: YCSPNKIMSQLPPTPTEYFLGPF*AAVWPW Trigger: CCAGGGCCACACTGCAGCTCAGAAAGGCCCTAAGAA...GTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | AATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATGCTGCTTCTGTGGCCTaGAACCTCCTCTCCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: NIVHPIKSCLNSHPPPPNAASVA*NLLSCS Trigger: GGAGCAGGAGAGGAGGTTTCAGGCCACAGAAGCAGC...ATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | AATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATGCCACAGAGAACAGATaGCGCATGGCCCGAGGGATC | + |
Preference number: 4 (lower is better) Translates to: NIVHPIKSCLNSHPPPPNATENR*RMARGI Trigger: GATCCCTCGGGCCATGCGGCATCTGTTCTCTGTGGC...ATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | ATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACACTGCAGGCCCCGAGCTaGATGCTCTCCAGAAATCTG | + |
Preference number: 4 (lower is better) Translates to: IVHPIKSCLNSHPPPPNTLQAPS*MLSRNL Trigger: CAGATTTCTGGAGAGCATGCAGCTCGGGGCCTGCAG...TGTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CCA 90 bp | AAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAAAGGAGCAGCGGGAACTaGCTTCTGGCTCCTCAGCAC | + |
Preference number: 4 (lower is better) Translates to: KYCSPNKIMSQLPPTPTERSSGN*LLAPQH Trigger: GTGCTGAGGAGCCAGAAGCCAGTTCCCGCTGCTCCT...TTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CCA 90 bp | ATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACATTCAGTTCCTGCAGCTaGTTGTGGAGTCGTCGCCGC | + |
Preference number: 4 (lower is better) Translates to: IVHPIKSCLNSHPPPPNTFSSCS*LWSRRR Trigger: GCGGCGACGACTCCACAACCAGCTGCAGGAACTGAA...TGTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CCA 90 bp | ATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACATCAAAGGAGAAATCATaGCGGACAGTGGGGGCCGGG | + |
Preference number: 4 (lower is better) Translates to: IVHPIKSCLNSHPPPPNTSKEKS*RTVGAG Trigger: CCCGGCCCCCACTGTCCGCCATGATTTCTCCTTTGA...TGTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CCA 90 bp | TATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACATCAGCCCTTCCAATTaGGGGTCTCCCCTAGGCCCT | + |
Preference number: 4 (lower is better) Translates to: YCSPNKIMSQLPPTPTEYISPSN*GSPLGP Trigger: AGGGCCTAGGGGAGACCCCCAATTGGAAGGGCTGAT...GTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CCA 90 bp | TATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACAGAACAGATGCCGCATaGCCCGAGGGATCAGCCCTT | + |
Preference number: 4 (lower is better) Translates to: YCSPNKIMSQLPPTPTEYRTDAA*PEGSAL Trigger: AAGGGCTGATCCCTCGGGCCATGCGGCATCTGTTCT...GTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | TATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACGTAGCCATCCAGTGCTaGCTGGACAAGCATGGCGAT | + |
Preference number: 4 (lower is better) Translates to: YCSPNKIMSQLPPTPTEYVAIQC*LDKHGD Trigger: ATCGCCATGCTTGTCCAGTCAGCACTGGATGGCTAC...GTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | TGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACACACCTGAGCAGTACCAATaGCACACTGGTTCACCTTGG | + |
Preference number: 4 (lower is better) Translates to: CSPNKIMSQLPPTPTEYTPEQYQ*HTGSPW Trigger: CCAAGGTGAACCAGTGTGTCATTGGTACTGCTCAGG...TGTGTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 ENSMUST00000173982.2 |
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CDS-3UTR GCA 90 bp | TGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACACACCACCTCTTCTTGGCTaGTTGACAGAGCTGCTTCTG | + |
Preference number: 4 (lower is better) Translates to: CSPNKIMSQLPPTPTEYTPPLLG*LTELLL Trigger: CAGAAGCAGCTCTGTCAAGCAGCCAAGAAGAGGTGG...TGTGTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | AATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATCTGCAGGCCCCGAGCTaGATGCTCTCCAGAAATCTG | + |
Preference number: 4 (lower is better) Translates to: NIVHPIKSCLNSHPPPPNLQAPS*MLSRNL Trigger: CAGATTTCTGGAGAGCATGCAGCTCGGGGCCTGCAG...ATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CCA 90 bp | AATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATTTCAGTTCCTGCAGCTaGTTGTGGAGTCGTCGCCGC | + |
Preference number: 4 (lower is better) Translates to: NIVHPIKSCLNSHPPPPNFSSCS*LWSRRR Trigger: GCGGCGACGACTCCACAACCAGCTGCAGGAACTGAA...ATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | AATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATGTAGCCATCCAGTGCTaGCTGGACAAGCATGGCGAT | + |
Preference number: 4 (lower is better) Translates to: NIVHPIKSCLNSHPPPPNVAIQC*LDKHGD Trigger: ATCGCCATGCTTGTCCAGTCAGCACTGGATGGCTAC...ATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | TATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACTTGCCCTTCAGTTCCTaGAGCTGGTTGTGGAGTCGT | + |
Preference number: 4 (lower is better) Translates to: YCSPNKIMSQLPPTPTEYLPFSS*SWLWSR Trigger: ACGACTCCACAACCAGCTGCAGGAACTGAAGGGCAA...GTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | AATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATTCAAACACTTCCTCCTaGTTGCTTCCCGGCGGGAAC | + |
Preference number: 4 (lower is better) Translates to: NIVHPIKSCLNSHPPPPNSNTSS*LLPGGN Trigger: GTTCCCGCCGGGAAGCAAGCAGGAGGAAGTGTTTGA...ATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | AATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATCCTGAGCAGTACCAATaGCACACTGGTTCACCTTGG | + |
Preference number: 4 (lower is better) Translates to: NIVHPIKSCLNSHPPPPNPEQYQ*HTGSPW Trigger: CCAAGGTGAACCAGTGTGTCATTGGTACTGCTCAGG...ATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 ENSMUST00000173982.2 |
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CDS-3UTR TCA 90 bp | TACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCTTGAGCCTGCTTGCTaGCAGGGGCACTCGGGAGGA | + |
Preference number: 4 (lower is better) Translates to: YIINIVHPIKSCLNSHPPLEPAC*QGHSGG Trigger: TCCTCCCGAGTGCCCCTGTCAGCAAGCAGGCTCAAG...GGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | TACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCGCTCCTCCAGCTGGGTaGTCAGTGTGCTCCGCTCCT | + |
Preference number: 4 (lower is better) Translates to: YIINIVHPIKSCLNSHPPAPPAG*SVCSAP Trigger: AGGAGCGGAGCACACTGAGCACCCAGCTGGAGGAGC...GGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | AATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATTGGGCTTCAGTCTTCTaGCGAAGACACACCACCTCT | + |
Preference number: 4 (lower is better) Translates to: NIVHPIKSCLNSHPPPPNWASVF*RRHTTS Trigger: AGAGGTGGTGTGTCTTCGGCAGAAGACTGAAGCCCA...ATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | ATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACAAGAACACCCGGATATTaGCCTTCAGTTCCTGCAGCT | + |
Preference number: 4 (lower is better) Translates to: IVHPIKSCLNSHPPPPNTRTPGY*PSVPAA Trigger: AGCTGCAGGAACTGAAGGGCAATATCCGGGTGTTCT...TGTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | TGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACACAAGCTGGAACACACTATaGCTGCGTGATGATCTCTTA | + |
Preference number: 4 (lower is better) Translates to: CSPNKIMSQLPPTPTEYTSWNTL*LRDDLL Trigger: TAAGAGATCATCACGCAGTCATAGTGTGTTCCAGCT...TGTGTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | TACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCAGGGCCTTTCTGAGCTaGAGTGTGGCCCTGGGTCTG | + |
Preference number: 4 (lower is better) Translates to: YIINIVHPIKSCLNSHPPRAFLS*SVALGL Trigger: CAGACCCAGGGCCACACTGCAGCTCAGAAAGGCCCT...GGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | AAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAAAGAACACCCGGATATTaGCCTTCAGTTCCTGCAGCT | + |
Preference number: 4 (lower is better) Translates to: KYCSPNKIMSQLPPTPTERTPGY*PSVPAA Trigger: AGCTGCAGGAACTGAAGGGCAATATCCGGGTGTTCT...TTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | ATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACACACTTCTTATTAGCCTaGGCAGTACCAATGACACAC | + |
Preference number: 4 (lower is better) Translates to: IVHPIKSCLNSHPPPPNTHFLLA*AVPMTH Trigger: GTGTGTCATTGGTACTGCTCAGGCTAATAAGAAGTG...TGTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | TTACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCAGGAGCAGTGGATGTaGCAGGCTTCTGGGCAGGAG | + |
Preference number: 4 (lower is better) Translates to: LHNKYCSPNKIMSQLPPTQEQWM*QASGQE Trigger: CTCCTGCCCAGAAGCCTGGCACATCCACTGCTCCTG...GGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | TACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCGCTGGGTGCTCAGTGTaGTCCGCTCCTCCTGCAATT | + |
Preference number: 4 (lower is better) Translates to: YIINIVHPIKSCLNSHPPAGCSV*SAPPAI Trigger: AATTGCAGGAGGAGCGGAGCACACTGAGCACCCAGC...GGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CCA 90 bp | TTACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCGCTGCAGTGTGGCCCTaGGTCTGTGACACTGTGCTG | + |
Preference number: 4 (lower is better) Translates to: LHNKYCSPNKIMSQLPPTAAVWP*VCDTVL Trigger: CAGCACAGTGTCACAGACCCAGGGCCACACTGCAGC...GGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CCA 90 bp | TACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCAGAACAGATGCCGCATaGCCCGAGGGATCAGCCCTT | + |
Preference number: 4 (lower is better) Translates to: YIINIVHPIKSCLNSHPPRTDAA*PEGSAL Trigger: AAGGGCTGATCCCTCGGGCCATGCGGCATCTGTTCT...GGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | AATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATCACTTCTTATTAGCCTaGGCAGTACCAATGACACAC | + |
Preference number: 4 (lower is better) Translates to: NIVHPIKSCLNSHPPPPNHFLLA*AVPMTH Trigger: GTGTGTCATTGGTACTGCTCAGGCTAATAAGAAGTG...ATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | TACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCTCAAACACTTCCTCCTaGTTGCTTCCCGGCGGGAAC | + |
Preference number: 4 (lower is better) Translates to: YIINIVHPIKSCLNSHPPSNTSS*LLPGGN Trigger: GTTCCCGCCGGGAAGCAAGCAGGAGGAAGTGTTTGA...GGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR TCA 90 bp | TACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCTGAGCAGTACCAATaGCACACTGGTTCACCTTGG | + |
Preference number: 4 (lower is better) Translates to: YIINIVHPIKSCLNSHPPPEQYQ*HTGSPW Trigger: CCAAGGTGAACCAGTGTGTCATTGGTACTGCTCAGG...GGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 ENSMUST00000173982.2 |
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CDS-3UTR CCA 90 bp | TTACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCATCCAGTGCTGACTaGACAAGCATGGCGATCTCC | + |
Preference number: 4 (lower is better) Translates to: LHNKYCSPNKIMSQLPPTPSSAD*TSMAIS Trigger: GGAGATCGCCATGCTTGTCCAGTCAGCACTGGATGG...GGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | TTACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCTGGGCTTCAGTCTTCTaGCGAAGACACACCACCTCT | + |
Preference number: 4 (lower is better) Translates to: LHNKYCSPNKIMSQLPPTWASVF*RRHTTS Trigger: AGAGGTGGTGTGTCTTCGGCAGAAGACTGAAGCCCA...GGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | AATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATGGAACACACTATGACTaGGTGATGATCTCTTATTTT | + |
Preference number: 4 (lower is better) Translates to: NIVHPIKSCLNSHPPPPNGTHYD*VMISYF Trigger: AAAATAAGAGATCATCACGCAGTCATAGTGTGTTCC...ATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR GCA 90 bp | TTACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCGGAACACACTATGACTaGGTGATGATCTCTTATTTT | + |
Preference number: 4 (lower is better) Translates to: LHNKYCSPNKIMSQLPPTGTHYD*VMISYF Trigger: AAAATAAGAGATCATCACGCAGTCATAGTGTGTTCC...GGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS GCA 90 bp | AGCTCCAAGACACGGGCACTCAGCGTCTCCAGCCTCTGCTGGTCCTaGTCAGCTCGGCTGCGTACACTGGCCAGCTCCCCTTCCAGGGTG | + |
Preference number: 5 (lower is better) Translates to: SSKTRALSVSSLCWS*SARLRTLASSPSRV Trigger: CACCCTGGAAGGGGAGCTGGCCAGTGTACGCAGCCGAGCTGAGCAGGACCAGCAGAGGCTGGAGACGCTGAGTGCCCGTGTCTTGGAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS CCA 90 bp | CCTGAAGCAGCCTTTCCCTGGTCTGCTCAGCTCGGCTGCGTACACTaGCCAGCTCCCCTTCCAGGGTGTTCCGCTCTGTCCCCAGGGTCG | + |
Preference number: 5 (lower is better) Translates to: PEAAFPWSAQLGCVH*PAPLPGCSALSPGS Trigger: CGACCCTGGGGACAGAGCGGAACACCCTGGAAGGGGAGCTGGCCAGTGTACGCAGCCGAGCTGAGCAGACCAGGGAAAGGCTGCTTCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114361.9 |
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CDS TCA 90 bp | GTAAGCCAGGGTCTAGCCGCTCACTCCCAGCTAGGTCCACAAGGTTaGGCGGAGCGCCACACTGCAGGCCCCGAGCTGCATGCTCTCCAG | + |
Preference number: 5 (lower is better) Translates to: VSQGLAAHSQLGPQG*AERHTAGPELHALQ Trigger: CTGGAGAGCATGCAGCTCGGGGCCTGCAGTGTGGCGCTCCGCTCAACCTTGTGGACCTAGCTGGGAGTGAGCGGCTAGACCCTGGCTTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS GCA 90 bp | CATTCCTCCAGCTCCAAGACACGGGCACTCAGCGTCTCCAGCCTCTaGTGGTCCTGCTCAGCTCGGCTGCGTACACTGGCCAGCTCCCCT | + |
Preference number: 5 (lower is better) Translates to: HSSSSKTRALSVSSL*WSCSARLRTLASSP Trigger: AGGGGAGCTGGCCAGTGTACGCAGCCGAGCTGAGCAGGACCAGCAGAGGCTGGAGACGCTGAGTGCCCGTGTCTTGGAGCTGGAGGAATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS CCA 90 bp | CCTTCCAGGGTGTTCCGCTCTGTCCCCAGGGTCGTGGCCTGCTCCTaGACCTCTCTGAGTTGCTCCCGAAGACCCCGGTTCTCCAGTTCC | + |
Preference number: 5 (lower is better) Translates to: PSRVFRSVPRVVACS*TSLSCSRRPRFSSS Trigger: GGAACTGGAGAACCGGGGTCTTCGGGAGCAACTCAGAGAGGTCCAGGAGCAGGCCACGACCCTGGGGACAGAGCGGAACACCCTGGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS CCA 90 bp | GTCCAGCAGGGCCAGGAGGAAACACGAGGAAGCCAGGAGATGGAGTaGATTCCCCTTCGAGGACAGGGCGCACGCGGCAGAACACCCGGA | + |
Preference number: 5 (lower is better) Translates to: VQQGQEETRGSQEME*IPLRGQGARGRTPG Trigger: TCCGGGTGTTCTGCCGCGTGCGCCCTGTCCTCGAAGGGGAATCCACTCCATCTCCTGGCTTCCTCGTGTTTCCTCCTGGCCCTGCTGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS GCA 90 bp | GACATAGCGGGCATTGGTGACAGTAAGCTCCTCACTTCCTGGGCTTaGCCGACGGATCTCACACTCGCCCCCTTGTCCCTTGCGGGGCCC | + |
Preference number: 5 (lower is better) Translates to: DIAGIGDSKLLTSWA*PTDLTLAPLSLAGP Trigger: GGGCCCCGCAAGGGACAAGGGGGCGAGTGTGAGATCCGTCGGGCAAGCCCAGGAAGTGAGGAGCTTACTGTCACCAATGCCCGCTATGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 ENSMUST00000173982.2 |
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CDS CCA 90 bp | GCAGCGGGAACTGGCTTCTGGCTCCTCAGCACTGCAGTGTGGCCCTaGGTCTGTGACACTGTGCTGAGGAGTGGTCCTCTGGGACGGGAT | + |
Preference number: 5 (lower is better) Translates to: AAGTGFWLLSTAVWP*VCDTVLRSGPLGRD Trigger: ATCCCGTCCCAGAGGACCACTCCTCAGCACAGTGTCACAGACCCAGGGCCACACTGCAGTGCTGAGGAGCCAGAAGCCAGTTCCCGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173386.2 |
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CDS TCA 90 bp | TGTTCCGCTCTGTCCCCAGGGTCGTGGCCTGCTCCTGGACCTCTCTaGGTTGCTCCCGAAGACCCCGGTTCTCCAGTTCCAGCGTTTGAG | + |
Preference number: 5 (lower is better) Translates to: CSALSPGSWPAPGPL*VAPEDPGSPVPAFE Trigger: CTCAAACGCTGGAACTGGAGAACCGGGGTCTTCGGGAGCAACTCAGAGAGGTCCAGGAGCAGGCCACGACCCTGGGGACAGAGCGGAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS TCA 90 bp | CAAGGCATCCTCCATCTGGTCAGGACCCCTCTTGAGCCTGCTTGCTaGCAGGGGCACTCGGGAGGAGGACTTCACCAGGGCTGCCTTCAG | + |
Preference number: 5 (lower is better) Translates to: QGILHLVRTPLEPAC*QGHSGGGLHQGCLQ Trigger: CTGAAGGCAGCCCTGGTGAAGTCCTCCTCCCGAGTGCCCCTGTCAGCAAGCAGGCTCAAGAGGGGTCCTGACCAGATGGAGGATGCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS GCA 90 bp | CTGCTTCTGTGGCCTGAAACCTCCTCTCCTGCTCCTCCAGCTGGGTaGTCAGTGTGCTCCGCTCCTCCTGCAATTGCAGCCGCTCTCCCT | + |
Preference number: 5 (lower is better) Translates to: LLLWPETSSPAPPAG*SVCSAPPAIAAALP Trigger: AGGGAGAGCGGCTGCAATTGCAGGAGGAGCGGAGCACACTGAGCACCCAGCTGGAGGAGCAGGAGAGGAGGTTTCAGGCCACAGAAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS GCA 90 bp | ATTCCCCTTCGAGGACAGGGCGCACGCGGCAGAACACCCGGATATTaGCCTTCAGTTCCTGCAGCTGGTTGTGGAGTCGTCGCCGCTCCA | + |
Preference number: 5 (lower is better) Translates to: IPLRGQGARGRTPGY*PSVPAAGCGVVAAP Trigger: TGGAGCGGCGACGACTCCACAACCAGCTGCAGGAACTGAAGGGCAATATCCGGGTGTTCTGCCGCGTGCGCCCTGTCCTCGAAGGGGAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS GCA 90 bp | CGCTCACTCCCAGCTAGGTCCACAAGGTTGAGCGGAGCGCCACACTaGAGGCCCCGAGCTGCATGCTCTCCAGAAATCTGCAGCTGGAAC | + |
Preference number: 5 (lower is better) Translates to: RSLPARSTRLSGAPH*RPRAACSPEICSWN Trigger: GTTCCAGCTGCAGATTTCTGGAGAGCATGCAGCTCGGGGCCTGCAGTGTGGCGCTCCGCTCAACCTTGTGGACCTAGCTGGGAGTGAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS CCA 90 bp | GCTCTCTTCCCTACCACCACAGGAGCAGTGGATGTGCCAGGCTTCTaGGCAGGAGCAGCGGGAACTGGCTTCTGGCTCCTCAGCACTGCA | + |
Preference number: 5 (lower is better) Translates to: ALFPTTTGAVDVPGF*AGAAGTGFWLLSTA Trigger: TGCAGTGCTGAGGAGCCAGAAGCCAGTTCCCGCTGCTCCTGCCCAGAAGCCTGGCACATCCACTGCTCCTGTGGTGGTAGGGAAGAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173386.2 |
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CDS CCA 90 bp | AGGAGCAGTGGATGTGCCAGGCTTCTGGGCAGGAGCAGCGGGAACTaGCTTCTGGCTCCTCAGCACTGTACCAATAGCAGAGCACCCACG | + |
Preference number: 5 (lower is better) Translates to: RSSGCARLLGRSSGN*LLAPQHCTNSRAPT Trigger: CGTGGGTGCTCTGCTATTGGTACAGTGCTGAGGAGCCAGAAGCCAGTTCCCGCTGCTCCTGCCCAGAAGCCTGGCACATCCACTGCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS CCA 90 bp | GCTCTCTTCCCTACCACCACAGGAGCAGTGGATGTGCCAGGCTTCTaGGCAGGAGCAGCGGGAACTGGCTTCTGGCTCCTCAGCACTGTA | + |
Preference number: 5 (lower is better) Translates to: ALFPTTTGAVDVPGF*AGAAGTGFWLLSTV Trigger: TACAGTGCTGAGGAGCCAGAAGCCAGTTCCCGCTGCTCCTGCCCAGAAGCCTGGCACATCCACTGCTCCTGTGGTGGTAGGGAAGAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS TCA 90 bp | TCTTTGCAGGCTCCAAGGCATCCTCCATCTGGTCAGGACCCCTCTTaGGCCTGCTTGCTGACAGGGGCACTCGGGAGGAGGACTTCACCA | + |
Preference number: 5 (lower is better) Translates to: SLQAPRHPPSGQDPS*ACLLTGALGRRTSP Trigger: TGGTGAAGTCCTCCTCCCGAGTGCCCCTGTCAGCAAGCAGGCTCAAGAGGGGTCCTGACCAGATGGAGGATGCCTTGGAGCCTGCAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS-3UTR CAA 90 bp | CCCACCCCCACCGAATACACACTAAAACAGAGACGCATGCGCACTGGCTTGCAAGATCAGCCCTTCCAATaGGGGGTCTCCCCTAGGCCC | + |
Preference number: 5 (lower is better) Translates to: PTPTEYTLKQRRMRTGLQDQPFQ*GVSPRP Trigger: GGGCCTAGGGGAGACCCCCAATTGGAAGGGCTGATC...TTGCAAGCCAGTGCGCATGCGTCTCTGTTTTAGTGTGTATTCGGTGGGGGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS TCA 90 bp | CCAATAGCAGAGCACCCACGAGGTCCTGTCTTCTTAGGGCCTTTCTaGGCTGCAGTGTGGCCCTGGGTCTGTGACACTGTGCTGAGGAGT | + |
Preference number: 5 (lower is better) Translates to: PIAEHPRGPVFLGPF*AAVWPWVCDTVLRS Trigger: ACTCCTCAGCACAGTGTCACAGACCCAGGGCCACACTGCAGCTCAGAAAGGCCCTAAGAAGACAGGACCTCGTGGGTGCTCTGCTATTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS GCA 90 bp | GCTGAGGAGTGGTCCTCTGGGACGGGATGTGTCAACTTTGGTCACTaGACCCATGACTCGTGTCCGTTTCTTTGCAGGCTCCAAGGCATC | + |
Preference number: 5 (lower is better) Translates to: AEEWSSGTGCVNFGH*THDSCPFLCRLQGI Trigger: GATGCCTTGGAGCCTGCAAAGAAACGGACACGAGTCATGGGTGCAGTGACCAAAGTTGACACATCCCGTCCCAGAGGACCACTCCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS GCA 90 bp | CCTGGGCTTCAGTCTTCTGCCGAAGACACACCACCTCTTCTTGGCTaGTTGACAGAGCTGCTTCTGTGGCCTGAAACCTCCTCTCCTGCT | + |
Preference number: 5 (lower is better) Translates to: PGLQSSAEDTPPLLG*LTELLLWPETSSPA Trigger: AGCAGGAGAGGAGGTTTCAGGCCACAGAAGCAGCTCTGTCAAGCAGCCAAGAAGAGGTGGTGTGTCTTCGGCAGAAGACTGAAGCCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS GCA 90 bp | CGGTCTCCTTGCTCAGCCAGTAAGGTCACCTGGGCTTCAGTCTTCTaGCGAAGACACACCACCTCTTCTTGGCTGCTTGACAGAGCTGCT | + |
Preference number: 5 (lower is better) Translates to: RSPCSASKVTWASVF*RRHTTSSWLLDRAA Trigger: AGCAGCTCTGTCAAGCAGCCAAGAAGAGGTGGTGTGTCTTCGGCAGAAGACTGAAGCCCAGGTGACCTTACTGGCTGAGCAAGGAGACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CAA 90 bp | TGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACACACTCACACTCGCCCCCTaGTCCCTTGCGGGGCCCAGT | + |
Preference number: 5 (lower is better) Translates to: CSPNKIMSQLPPTPTEYTLTLAP*SLAGPS Trigger: ACTGGGCCCCGCAAGGGACAAGGGGGCGAGTGTGAG...TGTGTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 ENSMUST00000173982.2 |
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CDS GCA 90 bp | CTGACTGGACAAGCATGGCGATCTCCTCAAACACTTCCTCCTGCTTaGTTCCCGGCGGGAACACCCGATCAAAGGAGAAATCATGGCGGA | + |
Preference number: 5 (lower is better) Translates to: LTGQAWRSPQTLPPA*FPAGTPDQRRNHGG Trigger: TCCGCCATGATTTCTCCTTTGATCGGGTGTTCCCGCCGGGAAGCAAGCAGGAGGAAGTGTTTGAGGAGATCGCCATGCTTGTCCAGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS TCA 90 bp | CCCCGAGCTGCATGCTCTCCAGAAATCTGCAGCTGGAACACACTATaGCTGCGTGATGATCTCTTATTTTGGGCAGTGTGGGCCACAGCC | + |
Preference number: 5 (lower is better) Translates to: PRAACSPEICSWNTL*LRDDLLFWAVWATA Trigger: GGCTGTGGCCCACACTGCCCAAAATAAGAGATCATCACGCAGTCATAGTGTGTTCCAGCTGCAGATTTCTGGAGAGCATGCAGCTCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS GCA 90 bp | AGTGCTGACTGGACAAGCATGGCGATCTCCTCAAACACTTCCTCCTaGTTGCTTCCCGGCGGGAACACCCGATCAAAGGAGAAATCATGG | + |
Preference number: 5 (lower is better) Translates to: SADWTSMAISSNTSS*LLPGGNTRSKEKSW Trigger: CCATGATTTCTCCTTTGATCGGGTGTTCCCGCCGGGAAGCAAGCAGGAGGAAGTGTTTGAGGAGATCGCCATGCTTGTCCAGTCAGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CAA 90 bp | TATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACAGTTCCTGCAGCTGGTaGTGGAGTCGTCGCCGCTCC | + |
Preference number: 5 (lower is better) Translates to: YCSPNKIMSQLPPTPTEYSSCSW*WSRRRS Trigger: GGAGCGGCGACGACTCCACAACCAGCTGCAGGAACT...GTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CAA 90 bp | TATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCCCACCGAATACTGGTCAGGACCCCTCTaGAGCCTGCTTGCTGACAGG | + |
Preference number: 5 (lower is better) Translates to: YCSPNKIMSQLPPTPTEYWSGPL*SLLADR Trigger: CCTGTCAGCAAGCAGGCTCAAGAGGGGTCCTGACCA...GTATTCGGTGGGGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173492.9 |
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CDS-3UTR CAA 90 bp | TACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCCGATCAGCCCTTCCAATaGGGGGTCTCCCCTAGGCCC | + |
Preference number: 5 (lower is better) Translates to: YIINIVHPIKSCLNSHPPDQPFQ*GVSPRP Trigger: GGGCCTAGGGGAGACCCCCAATTGGAAGGGCTGATC...GGGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS-3UTR CAA 90 bp | TTACATAATAAATATTGTTCACCCAATAAAATCATGTCTCAACTCCCACCCACCAGTTCCTGCAGCTGGTaGTGGAGTCGTCGCCGCTCC | + |
Preference number: 5 (lower is better) Translates to: LHNKYCSPNKIMSQLPPTSSCSW*WSRRRS Trigger: GGAGCGGCGACGACTCCACAACCAGCTGCAGGAACT...GGTGGGTGGGAGTTGAGACATGATTTTATTGGGTGAACAATATTTATTATGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS TCA 72 bp | GGCCCCAGTCAGGGTGGAGCGCCGATCATCAGATCGTaGGAGGCTAAGGCCCGTCGGGGGATCAGAGGGTCC | + |
Preference number: 6 (lower is better) Translates to: GPSQGGAPIIRS*EAKARRGIRGS Trigger: GGACCCTCTGATCCCCCGACGGGCCTTAGCCTCTCACGATCTGATGATCGGCGCTCCACCCTGACTGGGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS GCA 72 bp | ACACGGGCACTCAGCGTCTCCAGCCTCTGCTGGTCCTaGTCAGCTCGGCTGCGTACACTGGCCAGCTCCCCT | + |
Preference number: 6 (lower is better) Translates to: TRALSVSSLCWS*SARLRTLASSP Trigger: AGGGGAGCTGGCCAGTGTACGCAGCCGAGCTGAGCAGGACCAGCAGAGGCTGGAGACGCTGAGTGCCCGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS CAA 72 bp | GGGTCTAGCCGCTCACTCCCAGCTAGGTCCACAAGGTaGAGCGGAGCGCCACACTGCAGGCCCCGAGCTGCA | + |
Preference number: 6 (lower is better) Translates to: GSSRSLPARSTR*SGAPHCRPRAA Trigger: TGCAGCTCGGGGCCTGCAGTGTGGCGCTCCGCTCAACCTTGTGGACCTAGCTGGGAGTGAGCGGCTAGACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS TCA 72 bp | GGTCTAGCCGCTCACTCCCAGCTAGGTCCACAAGGTTaGGCGGAGCGCCACACTGCAGGCCCCGAGCTGCAT | + |
Preference number: 6 (lower is better) Translates to: GLAAHSQLGPQG*AERHTAGPELH Trigger: ATGCAGCTCGGGGCCTGCAGTGTGGCGCTCCGCTCAACCTTGTGGACCTAGCTGGGAGTGAGCGGCTAGACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS CCA 72 bp | GCCTTTCCCTGGTCTGCTCAGCTCGGCTGCGTACACTaGCCAGCTCCCCTTCCAGGGTGTTCCGCTCTGTCC | + |
Preference number: 6 (lower is better) Translates to: AFPWSAQLGCVH*PAPLPGCSALS Trigger: GGACAGAGCGGAACACCCTGGAAGGGGAGCTGGCCAGTGTACGCAGCCGAGCTGAGCAGACCAGGGAAAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114361.9 |
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CDS CAA 72 bp | CCCCAGGGTCGTGGCCTGCTCCTGGACCTCTCTGAGTaGCTCCCGAAGACCCCGGTTCTCCAGTTCCAGCGT | + |
Preference number: 6 (lower is better) Translates to: PQGRGLLLDLSE*LPKTPVLQFQR Trigger: ACGCTGGAACTGGAGAACCGGGGTCTTCGGGAGCAACTCAGAGAGGTCCAGGAGCAGGCCACGACCCTGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS CAA 72 bp | CTTGCCCGACGGATCTCACACTCGCCCCCTTGTCCCTaGCGGGGCCCAGTAGCTAGCAGGTCTCGAACGGTC | + |
Preference number: 6 (lower is better) Translates to: LARRISHSPPCP*RGPVASRSRTV Trigger: GACCGTTCGAGACCTGCTAGCTACTGGGCCCCGCAAGGGACAAGGGGGCGAGTGTGAGATCCGTCGGGCAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS TCA 72 bp | CTGTCCCCAGGGTCGTGGCCTGCTCCTGGACCTCTCTaGGTTGCTCCCGAAGACCCCGGTTCTCCAGTTCCA | + |
Preference number: 6 (lower is better) Translates to: LSPGSWPAPGPL*VAPEDPGSPVP Trigger: TGGAACTGGAGAACCGGGGTCTTCGGGAGCAACTCAGAGAGGTCCAGGAGCAGGCCACGACCCTGGGGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS TCA 72 bp | CTGGCTCCTCAGCACTGCAGTGTGGCCCTGGGTCTGTaGCACTGTGCTGAGGAGTGGTCCTCTGGGACGGGA | + |
Preference number: 6 (lower is better) Translates to: LAPQHCSVALGL*HCAEEWSSGTG Trigger: TCCCGTCCCAGAGGACCACTCCTCAGCACAGTGTCACAGACCCAGGGCCACACTGCAGTGCTGAGGAGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173386.2 |
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CDS GCA 72 bp | CCTGAAGCAGCCTTTCCCTGGTCTGCTCAGCTCGGCTaGGTACACTGGCCAGCTCCCCTTCCAGGGTGTTCC | + |
Preference number: 6 (lower is better) Translates to: PEAAFPWSAQLG*VHWPAPLPGCS Trigger: GGAACACCCTGGAAGGGGAGCTGGCCAGTGTACGCAGCCGAGCTGAGCAGACCAGGGAAAGGCTGCTTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114361.9 |
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CDS CAA 90 bp | GATTCCCCTTCGAGGACAGGGCGCACGCGGCAGAACACCCGGATATaGCCCTTCAGTTCCTGCAGCTGGTTGTGGAGTCGTCGCCGCTCC | + |
Preference number: 6 (lower is better) Translates to: DSPSRTGRTRQNTRI*PFSSCSWLWSRRRS Trigger: GGAGCGGCGACGACTCCACAACCAGCTGCAGGAACTGAAGGGCAATATCCGGGTGTTCTGCCGCGTGCGCCCTGTCCTCGAAGGGGAATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS CAA 90 bp | TGTAAGCCAGGGTCTAGCCGCTCACTCCCAGCTAGGTCCACAAGGTaGAGCGGAGCGCCACACTGCAGGCCCCGAGCTGCATGCTCTCCA | + |
Preference number: 6 (lower is better) Translates to: CKPGSSRSLPARSTR*SGAPHCRPRAACSP Trigger: TGGAGAGCATGCAGCTCGGGGCCTGCAGTGTGGCGCTCCGCTCAACCTTGTGGACCTAGCTGGGAGTGAGCGGCTAGACCCTGGCTTACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS CAA 90 bp | CCGCTCTGTCCCCAGGGTCGTGGCCTGCTCCTGGACCTCTCTGAGTaGCTCCCGAAGACCCCGGTTCTCCAGTTCCAGCGTTTGAGTCTT | + |
Preference number: 6 (lower is better) Translates to: PLCPQGRGLLLDLSE*LPKTPVLQFQRLSL Trigger: AAGACTCAAACGCTGGAACTGGAGAACCGGGGTCTTCGGGAGCAACTCAGAGAGGTCCAGGAGCAGGCCACGACCCTGGGGACAGAGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS GCA 72 bp | CAGCTCTCTTCCCTACCACCACAGGAGCAGTGGATGTaGCAGGCTTCTGGGCAGGAGCAGCGGGAACTGGCT | + |
Preference number: 6 (lower is better) Translates to: QLSSLPPQEQWM*QASGQEQRELA Trigger: AGCCAGTTCCCGCTGCTCCTGCCCAGAAGCCTGGCACATCCACTGCTCCTGTGGTGGTAGGGAAGAGAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS GCA 72 bp | TGGCCTGAAACCTCCTCTCCTGCTCCTCCAGCTGGGTaGTCAGTGTGCTCCGCTCCTCCTGCAATTGCAGCC | + |
Preference number: 6 (lower is better) Translates to: WPETSSPAPPAG*SVCSAPPAIAA Trigger: GGCTGCAATTGCAGGAGGAGCGGAGCACACTGAGCACCCAGCTGGAGGAGCAGGAGAGGAGGTTTCAGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS GCA 72 bp | CGAGGACAGGGCGCACGCGGCAGAACACCCGGATATTaGCCTTCAGTTCCTGCAGCTGGTTGTGGAGTCGTC | + |
Preference number: 6 (lower is better) Translates to: RGQGARGRTPGY*PSVPAAGCGVV Trigger: GACGACTCCACAACCAGCTGCAGGAACTGAAGGGCAATATCCGGGTGTTCTGCCGCGTGCGCCCTGTCCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS GCA 72 bp | CCAGCTAGGTCCACAAGGTTGAGCGGAGCGCCACACTaGAGGCCCCGAGCTGCATGCTCTCCAGAAATCTGC | + |
Preference number: 6 (lower is better) Translates to: PARSTRLSGAPH*RPRAACSPEIC Trigger: GCAGATTTCTGGAGAGCATGCAGCTCGGGGCCTGCAGTGTGGCGCTCCGCTCAACCTTGTGGACCTAGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS CCA 72 bp | CGCTCATCTCCTGGGCCACAGAGAACAGATGCCGCATaGCCCGAGGGATCAGCCCTTCCAATTGGGGGTCTC | + |
Preference number: 6 (lower is better) Translates to: RSSPGPQRTDAA*PEGSALPIGGL Trigger: GAGACCCCCAATTGGAAGGGCTGATCCCTCGGGCCATGCGGCATCTGTTCTCTGTGGCCCAGGAGATGAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS CCA 72 bp | GCGGGAACTGGCTTCTGGCTCCTCAGCACTGCAGTGTaGCCCTGGGTCTGTGACACTGTGCTGAGGAGTGGT | + |
Preference number: 6 (lower is better) Translates to: AGTGFWLLSTAV*PWVCDTVLRSG Trigger: ACCACTCCTCAGCACAGTGTCACAGACCCAGGGCCACACTGCAGTGCTGAGGAGCCAGAAGCCAGTTCCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173386.2 |
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CDS CCA 72 bp | GTTTGCCAGCTCTCTTCCCTACCACCACAGGAGCAGTaGATGTGCCAGGCTTCTGGGCAGGAGCAGCGGGAA | + |
Preference number: 6 (lower is better) Translates to: VCQLSSLPPQEQ*MCQASGQEQRE Trigger: TTCCCGCTGCTCCTGCCCAGAAGCCTGGCACATCCACTGCTCCTGTGGTGGTAGGGAAGAGAGCTGGCAAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS CAA 72 bp | TCACACAACTGGCCCTTCAGGTCCCAGGCAGGGCGTTaGCCAGCTCTCTTCCCTACCACCACAGGAGCAGTG | + |
Preference number: 6 (lower is better) Translates to: SHNWPFRSQAGR*PALFPTTTGAV Trigger: CACTGCTCCTGTGGTGGTAGGGAAGAGAGCTGGCAAACGCCCTGCCTGGGACCTGAAGGGCCAGTTGTGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS CAA 72 bp | TCGAGGACAGGGCGCACGCGGCAGAACACCCGGATATaGCCCTTCAGTTCCTGCAGCTGGTTGTGGAGTCGT | + |
Preference number: 6 (lower is better) Translates to: SRTGRTRQNTRI*PFSSCSWLWSR Trigger: ACGACTCCACAACCAGCTGCAGGAACTGAAGGGCAATATCCGGGTGTTCTGCCGCGTGCGCCCTGTCCTCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS CAA 90 bp | TTCTTTGCAGGCTCCAAGGCATCCTCCATCTGGTCAGGACCCCTCTaGAGCCTGCTTGCTGACAGGGGCACTCGGGAGGAGGACTTCACC | + |
Preference number: 6 (lower is better) Translates to: FFAGSKASSIWSGPL*SLLADRGTREEDFT Trigger: GGTGAAGTCCTCCTCCCGAGTGCCCCTGTCAGCAAGCAGGCTCAAGAGGGGTCCTGACCAGATGGAGGATGCCTTGGAGCCTGCAAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS TCA 72 bp | GAGCTGCAGTGTGGCCCTGGGTCTGTGACACTGTGCTaGGGAGTGGTCCTCTGGGACGGGATGTGTCAACTT | + |
Preference number: 6 (lower is better) Translates to: ELQCGPGSVTLC*GVVLWDGMCQL Trigger: AAGTTGACACATCCCGTCCCAGAGGACCACTCCTCAGCACAGTGTCACAGACCCAGGGCCACACTGCAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS TCA 72 bp | GAGCACCCACGAGGTCCTGTCTTCTTAGGGCCTTTCTaGGCTGCAGTGTGGCCCTGGGTCTGTGACACTGTG | + |
Preference number: 6 (lower is better) Translates to: EHPRGPVFLGPF*AAVWPWVCDTV Trigger: CACAGTGTCACAGACCCAGGGCCACACTGCAGCTCAGAAAGGCCCTAAGAAGACAGGACCTCGTGGGTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS TCA 72 bp | GCACTGCAGTGTGGCCCTGGGTCTGTGACACTGTGCTaGGGAGTGGTCCTCTGGGACGGGATGTGTCAACTT | + |
Preference number: 6 (lower is better) Translates to: ALQCGPGSVTLC*GVVLWDGMCQL Trigger: AAGTTGACACATCCCGTCCCAGAGGACCACTCCTCAGCACAGTGTCACAGACCCAGGGCCACACTGCAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173386.2 |
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CDS GCA 72 bp | ACGCGGCAGAACACCCGGATATTGCCCTTCAGTTCCTaGAGCTGGTTGTGGAGTCGTCGCCGCTCCATCTCT | + |
Preference number: 6 (lower is better) Translates to: TRQNTRILPFSS*SWLWSRRRSIS Trigger: AGAGATGGAGCGGCGACGACTCCACAACCAGCTGCAGGAACTGAAGGGCAATATCCGGGTGTTCTGCCGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS GCA 72 bp | GGCATTGGTGACAGTAAGCTCCTCACTTCCTGGGCTTaGCCGACGGATCTCACACTCGCCCCCTTGTCCCTT | + |
Preference number: 6 (lower is better) Translates to: GIGDSKLLTSWA*PTDLTLAPLSL Trigger: AAGGGACAAGGGGGCGAGTGTGAGATCCGTCGGGCAAGCCCAGGAAGTGAGGAGCTTACTGTCACCAATGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 ENSMUST00000173982.2 |
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CDS GCA 72 bp | AAGGTTGAGCGGAGCGCCACACTGCAGGCCCCGAGCTaGATGCTCTCCAGAAATCTGCAGCTGGAACACACT | + |
Preference number: 6 (lower is better) Translates to: KVERSATLQAPS*MLSRNLQLEHT Trigger: AGTGTGTTCCAGCTGCAGATTTCTGGAGAGCATGCAGCTCGGGGCCTGCAGTGTGGCGCTCCGCTCAACCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS CCA 72 bp | GTCCGTTTCTTTGCAGGCTCCAAGGCATCCTCCATCTaGTCAGGACCCCTCTTGAGCCTGCTTGCTGACAGG | + |
Preference number: 6 (lower is better) Translates to: VRFFAGSKASSI*SGPLLSLLADR Trigger: CCTGTCAGCAAGCAGGCTCAAGAGGGGTCCTGACCAGATGGAGGATGCCTTGGAGCCTGCAAAGAAACGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS GCA 72 bp | TGGACAAGCATGGCGATCTCCTCAAACACTTCCTCCTaGTTGCTTCCCGGCGGGAACACCCGATCAAAGGAG | + |
Preference number: 6 (lower is better) Translates to: WTSMAISSNTSS*LLPGGNTRSKE Trigger: CTCCTTTGATCGGGTGTTCCCGCCGGGAAGCAAGCAGGAGGAAGTGTTTGAGGAGATCGCCATGCTTGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS CCA 72 bp | CAGAACACCCGGATATTGCCCTTCAGTTCCTGCAGCTaGTTGTGGAGTCGTCGCCGCTCCATCTCTAACCCA | + |
Preference number: 6 (lower is better) Translates to: QNTRILPFSSCS*LWSRRRSISNP Trigger: TGGGTTAGAGATGGAGCGGCGACGACTCCACAACCAGCTGCAGGAACTGAAGGGCAATATCCGGGTGTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS GCA 72 bp | TGGTCCTCTGGGACGGGATGTGTCAACTTTGGTCACTaGACCCATGACTCGTGTCCGTTTCTTTGCAGGCTC | + |
Preference number: 6 (lower is better) Translates to: WSSGTGCVNFGH*THDSCPFLCRL Trigger: GAGCCTGCAAAGAAACGGACACGAGTCATGGGTGCAGTGACCAAAGTTGACACATCCCGTCCCAGAGGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS GCA 72 bp | TGCTCAGCCAGTAAGGTCACCTGGGCTTCAGTCTTCTaGCGAAGACACACCACCTCTTCTTGGCTGCTTGAC | + |
Preference number: 6 (lower is better) Translates to: CSASKVTWASVF*RRHTTSSWLLD Trigger: GTCAAGCAGCCAAGAAGAGGTGGTGTGTCTTCGGCAGAAGACTGAAGCCCAGGTGACCTTACTGGCTGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS TCA 72 bp | TGGGACGGGATGTGTCAACTTTGGTCACTGCACCCATaGCTCGTGTCCGTTTCTTTGCAGGCTCCAAGGCAT | + |
Preference number: 6 (lower is better) Translates to: WDGMCQLWSLHP*LVSVSLQAPRH Trigger: ATGCCTTGGAGCCTGCAAAGAAACGGACACGAGTCATGGGTGCAGTGACCAAAGTTGACACATCCCGTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS CAA 72 bp | CTGAGGAGTGGTCCTCTGGGACGGGATGTGTCAACTTaGGTCACTGCACCCATGACTCGTGTCCGTTTCTTT | + |
Preference number: 6 (lower is better) Translates to: LRSGPLGRDVST*VTAPMTRVRFF Trigger: AAAGAAACGGACACGAGTCATGGGTGCAGTGACCAAAGTTGACACATCCCGTCCCAGAGGACCACTCCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114361.9 ENSMUST00000173386.2 ENSMUST00000173492.9 |
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CDS CAA 72 bp | TCTTCTGCCGAAGACACACCACCTCTTCTTGGCTGCTaGACAGAGCTGCTTCTGTGGCCTGAAACCTCCTCT | + |
Preference number: 6 (lower is better) Translates to: SSAEDTPPLLGC*TELLLWPETSS Trigger: AGAGGAGGTTTCAGGCCACAGAAGCAGCTCTGTCAAGCAGCCAAGAAGAGGTGGTGTGTCTTCGGCAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS TCA 72 bp | ATAGGCAAAAATGCACACAGGGTAGCCATCCAGTGCTaGCTGGACAAGCATGGCGATCTCCTCAAACACTTC | + |
Preference number: 6 (lower is better) Translates to: IGKNAHRVAIQC*LDKHGDLLKHF Trigger: GAAGTGTTTGAGGAGATCGCCATGCTTGTCCAGTCAGCACTGGATGGCTACCCTGTGTGCATTTTTGCCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |
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CDS TCA 72 bp | GCATGCTCTCCAGAAATCTGCAGCTGGAACACACTATaGCTGCGTGATGATCTCTTATTTTGGGCAGTGTGG | + |
Preference number: 6 (lower is better) Translates to: ACSPEICSWNTL*LRDDLLFWAVW Trigger: CCACACTGCCCAAAATAAGAGATCATCACGCAGTCATAGTGTGTTCCAGCTGCAGATTTCTGGAGAGCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114361.9 ENSMUST00000173492.9 |