Pregenerated sensors for KIFBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036955Ensembl transcript IDs: ENSMUST00000065887.14, ENSMUST00000159704.8, ENSMUST00000162525.8, ENSMUST00000162648.3, ENSMUST00000162759.6
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCTCCACTGCAGAGATGGCGTCGCACAGCTCCCCAGTTCCAAACTaGACAGCCCTTTTCCTGACGCTCTCCTCCTCATCTAGCTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: SSTAEMASHSSPVPN*TALFLTLSSSSSSF Trigger: GAAGGAGCTAGATGAGGAGGAGAGCGTCAGGAAAAGGGCTGTGCAGTTTGGAACTGGGGAGCTGTGCGACGCCATCTCTGCAGTGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR GCA 90 bp | TTCAGGTCCACAGTCAGGGGCTCTAGCATGGCTATCCTGCGCTTGTaGATCTTGCACCGTCTCTCCATGTCAGCCTCAAAGAACGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: FRSTVRGSSMAILRL*ILHRLSMSASKNES Trigger: GCTCTCGTTCTTTGAGGCTGACATGGAGAGACGGTGCAAGATGCACAAGCGCAGGATAGCCATGCTAGAGCCCCTGACTGTGGACCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR GCA 90 bp | ACTGTGGGTTCAGGTCCACAGTCAGGGGCTCTAGCATGGCTATCCTaGGCTTGTGCATCTTGCACCGTCTCTCCATGTCAGCCTCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: TVGSGPQSGALAWLS*ACASCTVSPCQPQR Trigger: TCTTTGAGGCTGACATGGAGAGACGGTGCAAGATGCACAAGCGCAGGATAGCCATGCTAGAGCCCCTGACTGTGGACCTGAACCCACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR CCA 90 bp | ACAGGTAGTACTGTGGGTTCAGGTCCACAGTCAGGGGCTCTAGCATaGCTATCCTGCGCTTGTGCATCTTGCACCGTCTCTCCATGTCAG | + |
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Preference number: 1 (lower is better) Translates to: TGSTVGSGPQSGALA*LSCACASCTVSPCQ Trigger: CTGACATGGAGAGACGGTGCAAGATGCACAAGCGCAGGATAGCCATGCTAGAGCCCCTGACTGTGGACCTGAACCCACAGTACTACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR GCA 90 bp | ATTCGTGGATTCCATGGTCACTTTGTCACTCTAGCTGTGGTAGAATaGTTGTGGGGCTCCAGTCTCAGTCCCCAGCACCCACATGCACCC | + |
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Preference number: 1 (lower is better) Translates to: IRGFHGHFVTLAVVE*LWGSSLSPQHPHAP Trigger: GGGTGCATGTGGGTGCTGGGGACTGAGACTGGAGCCCCACAAGCATTCTACCACAGCTAGAGTGACAAAGTGACCATGGAATCCACGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
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| 3UTR GCA 90 bp | CGGAATTTAGCTAACATGGCCGGGCGGAGGACGTCTTCCCCGATGTaGTCAGGAAAGACTTTGTTTGGGTCTCTCAGGGAGTCTAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: RNLANMAGRRTSSPM*SGKTLFGSLRESRK Trigger: CTTCCTAGACTCCCTGAGAGACCCAAACAAAGTCTTTCCTGAGCACATCGGGGAAGACGTCCTCCGCCCGGCCATGTTAGCTAAATTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR GCA 90 bp | CTGAGCTCCGACTGCTTGTCCAGGTCAAGCTCTCCTATGTTGTCCTaGATGGAGAGCTGCGCGTTTTGCATCAGAGTCAGGCAGTACTTG | + |
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Preference number: 1 (lower is better) Translates to: LSSDCLSRSSSPMLS*MESCAFCIRVRQYL Trigger: CAAGTACTGCCTGACTCTGATGCAAAACGCGCAGCTCTCCATGCAGGACAACATAGGAGAGCTTGACCTGGACAAGCAGTCGGAGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
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| 3UTR GCA 90 bp | TCCTCCTCATCTAGCTCCTTCTTGCGTAGAGCTCTGAGCTCCGACTaGTTGTCCAGGTCAAGCTCTCCTATGTTGTCCTGCATGGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: SSSSSSFLRRALSSD*LSRSSSPMLSCMES Trigger: GCTCTCCATGCAGGACAACATAGGAGAGCTTGACCTGGACAAGCAGTCGGAGCTCAGAGCTCTACGCAAGAAGGAGCTAGATGAGGAGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
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| 3UTR TCA 90 bp | TCATGTCATAGTACGCGTGTGCGATTTCAAACTGAATCTGCCTGCTaGCCAACAGGTAGTACTGTGGGTTCAGGTCCACAGTCAGGGGCT | + |
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Preference number: 1 (lower is better) Translates to: SCHSTRVRFQTESAC*PTGSTVGSGPQSGA Trigger: AGCCCCTGACTGTGGACCTGAACCCACAGTACTACCTGTTGGTCAGCAGGCAGATTCAGTTTGAAATCGCACACGCGTACTATGACATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR GCA 90 bp | CTGCGCGTTTTGCATCAGAGTCAGGCAGTACTTGATCCAGCATCTTaGTATTTCCCCTTTCCTCTGATGGTAAAGCTCTGGCACGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: LRVLHQSQAVLDPAS*YFPFPLMVKLWHVS Trigger: GGAGACGTGCCAGAGCTTTACCATCAGAGGAAAGGGGAAATAGCAAGATGCTGGATCAAGTACTGCCTGACTCTGATGCAAAACGCGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
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| 3UTR CCA 90 bp | GAGAGCACCTTGAACAGAGCGCTGTGGTCCTGGACAACTTCAATGTaGTCAGTGACATACCCATCGATCTGGAAGAACTCCTTTGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: ESTLNRALWSWTTSM*SVTYPSIWKNSFAS Trigger: TGAGGCAAAGGAGTTCTTCCAGATCGATGGGTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAGCGCTCTGTTCAAGGTGCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR CCA 90 bp | TCAGCCTCAAAGAACGAGAGCACCTTGAACAGAGCGCTGTGGTCCTaGACAACTTCAATGTGGTCAGTGACATACCCATCGATCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SASKNESTLNRALWS*TTSMWSVTYPSIWK Trigger: CTTCCAGATCGATGGGTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAGCGCTCTGTTCAAGGTGCTCTCGTTCTTTGAGGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR CCA 90 bp | TCCATGTCAGCCTCAAAGAACGAGAGCACCTTGAACAGAGCGCTGTaGTCCTGGACAACTTCAATGTGGTCAGTGACATACCCATCGATC | + |
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Preference number: 1 (lower is better) Translates to: SMSASKNESTLNRAL*SWTTSMWSVTYPSI Trigger: GATCGATGGGTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAGCGCTCTGTTCAAGGTGCTCTCGTTCTTTGAGGCTGACATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR TCA 90 bp | CCTGCATGGAGAGCTGCGCGTTTTGCATCAGAGTCAGGCAGTACTTaGTCCAGCATCTTGCTATTTCCCCTTTCCTCTGATGGTAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: PAWRAARFASESGST*SSILLFPLSSDGKA Trigger: AGCTTTACCATCAGAGGAAAGGGGAAATAGCAAGATGCTGGATCAAGTACTGCCTGACTCTGATGCAAAACGCGCAGCTCTCCATGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
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| 3UTR GCA 90 bp | GTCAGCAATGGCGACCTTCAAGTCCATCATGTCATAGTACGCGTGTaGGATTTCAAACTGAATCTGCCTGCTGACCAACAGGTAGTACTG | + |
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Preference number: 1 (lower is better) Translates to: VSNGDLQVHHVIVRV*DFKLNLPADQQVVL Trigger: CAGTACTACCTGTTGGTCAGCAGGCAGATTCAGTTTGAAATCGCACACGCGTACTATGACATGATGGACTTGAAGGTCGCCATTGCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR TCA 90 bp | GTCATCCTTAGCCACATCGAAAGTTCAAATTCGAGGCCAGCTAGGTaGGACCTTGGCTCAACAAACCAGGGAACAAGCTATATGGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: VILSHIESSNSRPAR*DLGSTNQGTSYMVC Trigger: ACACACCATATAGCTTGTTCCCTGGTTTGTTGAGCCAAGGTCTCACCTAGCTGGCCTCGAATTTGAACTTTCGATGTGGCTAAGGATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159704.8 ENSMUST00000162759.6 |
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| 3UTR CCA 90 bp | GAGAAAAGTAAGCTAGAATTTGTTGCCATCAATTCGTGGATTCCATaGTCACTTTGTCACTCTAGCTGTGGTAGAATGCTTGTGGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: EKSKLEFVAINSWIP*SLCHSSCGRMLVGL Trigger: GAGCCCCACAAGCATTCTACCACAGCTAGAGTGACAAAGTGACCATGGAATCCACGAATTGATGGCAACAAATTCTAGCTTACTTTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
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| 3UTR CCA 90 bp | GGGAGGCTGGAGAAAAGTAAGCTAGAATTTGTTGCCATCAATTCGTaGATTCCATGGTCACTTTGTCACTCTAGCTGTGGTAGAATGCTT | + |
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Preference number: 1 (lower is better) Translates to: GRLEKSKLEFVAINS*IPWSLCHSSCGRML Trigger: AAGCATTCTACCACAGCTAGAGTGACAAAGTGACCATGGAATCCACGAATTGATGGCAACAAATTCTAGCTTACTTTTCTCCAGCCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
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| 3UTR TCA 90 bp | ACCACTGTTCTCCATTGTTGCAAATTAACACTAACCATCAAAGGTTaGACCCAGGACTTTGTGTGTGCTCAAACTCACATACTACCTAGA | + |
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Preference number: 1 (lower is better) Translates to: TTVLHCCKLTLTIKG*TQDFVCAQTHILPR Trigger: TCTAGGTAGTATGTGAGTTTGAGCACACACAAAGTCCTGGGTTCAACCTTTGATGGTTAGTGTTAATTTGCAACAATGGAGAACAGTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
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| 3UTR TCA 90 bp | AACAGGCTCTTCTACCAGGTACACTACCCAGTGTTGTTCCTAGTATaGAATCTAACAAGTACTGTCAGCAAGGACTTAACATTTAGAACT | + |
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Preference number: 1 (lower is better) Translates to: NRLFYQVHYPVLFLV*NLTSTVSKDLTFRT Trigger: AGTTCTAAATGTTAAGTCCTTGCTGACAGTACTTGTTAGATTTCATACTAGGAACAACACTGGGTAGTGTACCTGGTAGAAGAGCCTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGGCCTCATTTGCTATAGGGGAGGGGAGTGGCTTCAAGCTGCACGTCTCTTTCTGGAGCCCAGAGTaGATCCCTCTGGCCCTGGCG | + |
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Preference number: 2 (lower is better) Translates to: GWASFAIGEGSGFKLHVSFWSPE*IPLALA Trigger: CGCCAGGGCCAGAGGGATGCACTCTGGGCTCCAGAA...AGAGACGTGCAGCTTGAAGCCACTCCCCTCCCCTATAGCAAATGAGGCCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGCCCTGGCGAAGGTGACTGTGGGGCTGGGCCTCATTTGCTATAGGGGAGGGGCTATCCTGCGCTTGTaGATCTTGCACCGTCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LALAKVTVGLGLICYRGGAILRL*ILHRLS Trigger: GGAGAGACGGTGCAAGATGCACAAGCGCAGGATAGC...CCCTCCCCTATAGCAAATGAGGCCCAGCCCCACAGTCACCTTCGCCAGGGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR GCA 90 bp | CCATACAGACGAGCTACCCGGAATTTAGCTAACATGGCCGGGCGGAGGACGTCTTTCTGGAGCCCAGAGTaGATCCCTCTGGCCCTGGCG | + |
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Preference number: 2 (lower is better) Translates to: PYRRATRNLANMAGRRTSFWSPE*IPLALA Trigger: CGCCAGGGCCAGAGGGATGCACTCTGGGCTCCAGAA...AGACGTCCTCCGCCCGGCCATGTTAGCTAAATTCCGGGTAGCTCGTCTGTATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR TCA 90 bp | GACATACCCATCGATCTGGAAGAACTCCTTTGCCTCACACACATAGTGCTGACCTGGCCCTGGCGAAGGTaGCTGTGGGGCTGGGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: DIPIDLEELLCLTHIVLTWPWRR*LWGWAS Trigger: TGAGGCCCAGCCCCACAGTCACCTTCGCCAGGGCCA...GGTCAGCACTATGTGTGTGAGGCAAAGGAGTTCTTCCAGATCGATGGGTATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR CAA 90 bp | GGGTTCAGGTCCACAGTCAGGGGCTCTAGCATGGCTATCCTGCGCTaGTGCATCTTGCACCGTCTCTCCATGTCAGCCTCAAAGAACGAG | + |
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Preference number: 2 (lower is better) Translates to: GFRSTVRGSSMAILR*CILHRLSMSASKNE Trigger: CTCGTTCTTTGAGGCTGACATGGAGAGACGGTGCAAGATGCACAAGCGCAGGATAGCCATGCTAGAGCCCCTGACTGTGGACCTGAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR GCA 90 bp | CATGGCTATCCTGCGCTTGTGCATCTTGCACCGTCTCTCCATGTCAGCCTCAAAGGGCTGGGCCTCATTTaGTATAGGGGAGGGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: HGYPALVHLAPSLHVSLKGLGLI*YRGGEW Trigger: CCACTCCCCTCCCCTATAGCAAATGAGGCCCAGCCC...TTTGAGGCTGACATGGAGAGACGGTGCAAGATGCACAAGCGCAGGATAGCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR CAA 90 bp | TCCACAGTCAGGGGCTCTAGCATGGCTATCCTGCGCTTGTGCATCTaGCACCGTCTCTCCATGTCAGCCTCAAAGAACGAGAGCACCTTG | + |
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Preference number: 2 (lower is better) Translates to: STVRGSSMAILRLCI*HRLSMSASKNESTL Trigger: CAAGGTGCTCTCGTTCTTTGAGGCTGACATGGAGAGACGGTGCAAGATGCACAAGCGCAGGATAGCCATGCTAGAGCCCCTGACTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR CAA 90 bp | TGCACAGCCCTTTTCCTGACGCTCTCCTCCTCATCTAGCTCCTTCTaGCGTAGAGCTCTGAGCTCCGACTGCTTGTCCAGGTCAAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: CTALFLTLSSSSSSF*RRALSSDCLSRSSS Trigger: AGAGCTTGACCTGGACAAGCAGTCGGAGCTCAGAGCTCTACGCAAGAAGGAGCTAGATGAGGAGGAGAGCGTCAGGAAAAGGGCTGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
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| 3UTR-3UTR TCA 90 bp | CGCTTGTGCATCTTGCACCGTCTCTCCATGTCAGCCTCAAAGAACGAGAGCACCGCACAGCCCTTTTCCTaGCGCTCTCCTCCTCATCTA | + |
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Preference number: 2 (lower is better) Translates to: RLCILHRLSMSASKNESTAQPFS*RSPPHL Trigger: TAGATGAGGAGGAGAGCGTCAGGAAAAGGGCTGTGC...GGTGCTCTCGTTCTTTGAGGCTGACATGGAGAGACGGTGCAAGATGCACAAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR GCA 90 bp | GGAGTGGCTTCAAGCTGCACGTCTCTTTCCTTTGACCAAGGCTTAGGTCAGGGCATAGACTCGGGTACCTaGCTGCTTCTGGAGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: GVASSCTSLSFDQGLGQGIDSGT*LLLEPR Trigger: TCTGGGCTCCAGAAGCAGGCAGGTACCCGAGTCTAT...GCCCTGACCTAAGCCTTGGTCAAAGGAAAGAGACGTGCAGCTTGAAGCCACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCGGGCGGAGGACGTCTTCCCCGATGTGCTCAGGAAAGACTTTGTTTGGGTCCTGGAAGAACTCCTTTaGCTCACACACATAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: GRAEDVFPDVLRKDFVWVLEELL*LTHIVL Trigger: CAGCACTATGTGTGTGAGGCAAAGGAGTTCTTCCAG...GACCCAAACAAAGTCTTTCCTGAGCACATCGGGGAAGACGTCCTCCGCCCGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR GCA 90 bp | CCATACAGACGAGCTACCCGGAATTTAGCTAACATGGCCGGGCGGAGGACGTCTTGCGCTTGTGCATCTTaGACCGTCTCTCCATGTCAG | + |
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Preference number: 2 (lower is better) Translates to: PYRRATRNLANMAGRRTSCACAS*TVSPCQ Trigger: CTGACATGGAGAGACGGTGCAAGATGCACAAGCGCA...AGACGTCCTCCGCCCGGCCATGTTAGCTAAATTCCGGGTAGCTCGTCTGTATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR CAA 90 bp | TCCTCATCTAGCTCCTTCTTGCGTAGAGCTCTGAGCTCCGACTGCTaGTCCAGGTCAAGCTCTCCTATGTTGTCCTGCATGGAGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: SSSSSFLRRALSSDC*SRSSSPMLSCMESC Trigger: GCAGCTCTCCATGCAGGACAACATAGGAGAGCTTGACCTGGACAAGCAGTCGGAGCTCAGAGCTCTACGCAAGAAGGAGCTAGATGAGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGAACAAGCTATATGGTGTGTTCTGTGGACACAGTAAGGCCGATGTTCAGTGCTTGCTTCCTAGGTaGGGAGGGCAGGGGCTCATC | + |
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Preference number: 2 (lower is better) Translates to: PGNKLYGVFCGHSKADVQCLLPR*GGQGLI Trigger: GATGAGCCCCTGCCCTCCTCACCTAGGAAGCAAGCA...CTGAACATCGGCCTTACTGTGTCCACAGAACACACCATATAGCTTGTTCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159704.8 ENSMUST00000162759.6 |
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| 3UTR-3UTR GCA 90 bp | GAGAGCTGCGCGTTTTGCATCAGAGTCAGGCAGTACTTGATCCAGCATCTTGCTCACGGTCATGTCGTCTaGACTGTGCACTGTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: ESCAFCIRVRQYLIQHLAHGHVV*TVHCPL Trigger: CAGAGGACAGTGCACAGTGCAGACGACATGACCGTG...AGCAAGATGCTGGATCAAGTACTGCCTGACTCTGATGCAAAACGCGCAGCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
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| 3UTR-3UTR CCA 90 bp | GCGCTTGTGCATCTTGCACCGTCTCTCCATGTCAGCCTCAAAGAACGAGAGCACCAACAGGTAGTACTGTaGGTTCAGGTCCACAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: ALVHLAPSLHVSLKEREHQQVVL*VQVHSQ Trigger: CTGACTGTGGACCTGAACCCACAGTACTACCTGTTG...GTGCTCTCGTTCTTTGAGGCTGACATGGAGAGACGGTGCAAGATGCACAAGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR CCA 90 bp | CGCTTGTGCATCTTGCACCGTCTCTCCATGTCAGCCTCAAAGAACGAGAGCACCCTATGTTGTCCTGCATaGAGAGCTGCGCGTTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: RLCILHRLSMSASKNESTLCCPA*RAARFA Trigger: TGCAAAACGCGCAGCTCTCCATGCAGGACAACATAG...GGTGCTCTCGTTCTTTGAGGCTGACATGGAGAGACGGTGCAAGATGCACAAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
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| 3UTR CAA 90 bp | ATCTTGCACCGTCTCTCCATGTCAGCCTCAAAGAACGAGAGCACCTaGAACAGAGCGCTGTGGTCCTGGACAACTTCAATGTGGTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: ILHRLSMSASKNEST*NRALWSWTTSMWSV Trigger: CACTGACCACATTGAAGTTGTCCAGGACCACAGCGCTCTGTTCAAGGTGCTCTCGTTCTTTGAGGCTGACATGGAGAGACGGTGCAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR TCA 90 bp | GGTACACTACCCAGTGTTGTTCCTAGTATGAAATCTAACAAGTACTGTCAGCAATGGCCCTGGCGAAGGTaGCTGTGGGGCTGGGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: GTLPSVVPSMKSNKYCQQWPWRR*LWGWAS Trigger: TGAGGCCCAGCCCCACAGTCACCTTCGCCAGGGCCA...TTGCTGACAGTACTTGTTAGATTTCATACTAGGAACAACACTGGGTAGTGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR GCA 90 bp | GAACAGAGCGCTGTGGTCCTGGACAACTTCAATGTGGTCAGTGACATACCCATCCTAGCATGGCTATCCTaGGCTTGTGCATCTTGCACC | + |
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Preference number: 2 (lower is better) Translates to: EQSAVVLDNFNVVSDIPILAWLS*ACASCT Trigger: GGTGCAAGATGCACAAGCGCAGGATAGCCATGCTAG...GATGGGTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAGCGCTCTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGTCCTGGACAACTTCAATGTGGTCAGTGACATACCCATCGATCTGGAAGTATAGGGGAGGGGAGTaGCTTCAAGCTGCACGTCTC | + |
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Preference number: 2 (lower is better) Translates to: LWSWTTSMWSVTYPSIWKYRGGE*LQAARL Trigger: GAGACGTGCAGCTTGAAGCCACTCCCCTCCCCTATA...CTTCCAGATCGATGGGTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR TCA 90 bp | AGTACTGTCAGCAAGGACTTAACATTTAGAACTCTAGGCAGGAGATGTTTATACTGGCCCTGGCGAAGGTaGCTGTGGGGCTGGGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: STVSKDLTFRTLGRRCLYWPWRR*LWGWAS Trigger: TGAGGCCCAGCCCCACAGTCACCTTCGCCAGGGCCA...GTATAAACATCTCCTGCCTAGAGTTCTAAATGTTAAGTCCTTGCTGACAGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR TCA 90 bp | CGACCTTCAAGTCCATCATGTCATAGTACGCGTGTGCGATTTCAAACTGAATCTGTGAGTCGGGGTCCCTaGGCTTGTCAGCAATGGCGA | + |
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Preference number: 2 (lower is better) Translates to: RPSSPSCHSTRVRFQTESVSRGP*ACQQWR Trigger: TCGCCATTGCTGACAAGCTCAGGGACCCCGACTCAC...AGATTCAGTTTGAAATCGCACACGCGTACTATGACATGATGGACTTGAAGGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAAGACTTTGTTTGGGTCTCTCAGGGAGTCTAGGAAGAGCTGGTAGTACTGCTATCCTGCGCTTGTaGATCTTGCACCGTCTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: QERLCLGLSGSLGRAGSTAILRL*ILHRLS Trigger: GGAGAGACGGTGCAAGATGCACAAGCGCAGGATAGC...AGTACTACCAGCTCTTCCTAGACTCCCTGAGAGACCCAAACAAAGTCTTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR CCA 90 bp | GAACAGAGCGCTGTGGTCCTGGACAACTTCAATGTGGTCAGTGACATACCCATCCAACAGGTAGTACTGTaGGTTCAGGTCCACAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: EQSAVVLDNFNVVSDIPIQQVVL*VQVHSQ Trigger: CTGACTGTGGACCTGAACCCACAGTACTACCTGTTG...GATGGGTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAGCGCTCTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTTCAAGTCCATCATGTCATAGTACGCGTGTGCGATTTCAAACTGAATCTGCCGCACAGCCCTTTTCCTaGCGCTCTCCTCCTCATCTA | + |
|
Preference number: 2 (lower is better) Translates to: PSSPSCHSTRVRFQTESAAQPFS*RSPPHL Trigger: TAGATGAGGAGGAGAGCGTCAGGAAAAGGGCTGTGC...GGCAGATTCAGTTTGAAATCGCACACGCGTACTATGACATGATGGACTTGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCACATTCAACACAGCAACAGGCTCTTCTACCAGGTACACTACCCAGTGTTATAGACTCGGGTACCTaGCTGCTTCTGGAGCCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: FSHSTQQQALLPGTLPSVIDSGT*LLLEPR Trigger: TCTGGGCTCCAGAAGCAGGCAGGTACCCGAGTCTAT...AACACTGGGTAGTGTACCTGGTAGAAGAGCCTGTTGCTGTGTTGAATGTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCACATTCAACACAGCAACAGGCTCTTCTACCAGGTACACTACCCAGTGTTTATAGGGGAGGGGAGTaGCTTCAAGCTGCACGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: FSHSTQQQALLPGTLPSVYRGGE*LQAARL Trigger: GAGACGTGCAGCTTGAAGCCACTCCCCTCCCCTATA...AACACTGGGTAGTGTACCTGGTAGAAGAGCCTGTTGCTGTGTTGAATGTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGGAGGTGGAAGCAGGAGGATCAGGAGTTCAAGGTCATCCTTAGCCACATCAGGGAACAAGCTATATaGTGTGTTCTGTGGACACAG | + |
|
Preference number: 2 (lower is better) Translates to: LGRWKQEDQEFKVILSHIREQAI*CVLWTQ Trigger: CTGTGTCCACAGAACACACCATATAGCTTGTTCCCT...GATGTGGCTAAGGATGACCTTGAACTCCTGATCCTCCTGCTTCCACCTCCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159704.8 ENSMUST00000162759.6 |
||
| 3UTR-3UTR CCA 90 bp | GAACAGAGCGCTGTGGTCCTGGACAACTTCAATGTGGTCAGTGACATACCCATCTTGAACAGAGCGCTGTaGTCCTGGACAACTTCAATG | + |
|
Preference number: 2 (lower is better) Translates to: EQSAVVLDNFNVVSDIPILNRAL*SWTTSM Trigger: CATTGAAGTTGTCCAGGACCACAGCGCTCTGTTCAA...GATGGGTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAGCGCTCTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR GCA 90 bp | CCATACAGACGAGCTACCCGGAATTTAGCTAACATGGCCGGGCGGAGGACGTCTACAAGCGATCGAAAATaGAAAACACCTGTCACTTTA | + |
|
Preference number: 2 (lower is better) Translates to: PYRRATRNLANMAGRRTSTSDRK*KTPVTL Trigger: TAAAGTGACAGGTGTTTTGCATTTTCGATCGCTTGT...AGACGTCCTCCGCCCGGCCATGTTAGCTAAATTCCGGGTAGCTCGTCTGTATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR GCA 90 bp | GTACGCGTGTGCGATTTCAAACTGAATCTGCCTGCTGACCAACAGGTAGTACTGCTGGAAGAACTCCTTTaGCTCACACACATAGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VRVCDFKLNLPADQQVVLLEELL*LTHIVL Trigger: CAGCACTATGTGTGTGAGGCAAAGGAGTTCTTCCAG...CAGTACTACCTGTTGGTCAGCAGGCAGATTCAGTTTGAAATCGCACACGCGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCACATTCAACACAGCAACAGGCTCTTCTACCAGGTACACTACCCAGTGTTCTAGCATGGCTATCCTaGGCTTGTGCATCTTGCACC | + |
|
Preference number: 2 (lower is better) Translates to: FSHSTQQQALLPGTLPSVLAWLS*ACASCT Trigger: GGTGCAAGATGCACAAGCGCAGGATAGCCATGCTAG...AACACTGGGTAGTGTACCTGGTAGAAGAGCCTGTTGCTGTGTTGAATGTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR CCA 90 bp | GAACAGAGCGCTGTGGTCCTGGACAACTTCAATGTGGTCAGTGACATACCCATCTGGACAACTTCAATGTaGTCAGTGACATACCCATCG | + |
|
Preference number: 2 (lower is better) Translates to: EQSAVVLDNFNVVSDIPIWTTSM*SVTYPS Trigger: CGATGGGTATGTCACTGACCACATTGAAGTTGTCCA...GATGGGTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAGCGCTCTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAACACAGCAACAGGCTCTTCTACCAGGTACACTACCCAGTGTTGTTCCTAGTAGAGCGCTGTGGTCCTaGACAACTTCAATGTGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: STQQQALLPGTLPSVVPSRALWS*TTSMWS Trigger: TGACCACATTGAAGTTGTCCAGGACCACAGCGCTCT...ACTAGGAACAACACTGGGTAGTGTACCTGGTAGAAGAGCCTGTTGCTGTGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR CAA 90 bp | GTTGCCAAATTCTCTAGCTCTTTCTTGGGATCTGCAGTGATGATTTaGCCATACAGACGAGCTACCCGGAATTTAGCTAACATGGCCGGG | + |
|
Preference number: 2 (lower is better) Translates to: VAKFSSSFLGSAVMI*PYRRATRNLANMAG Trigger: CCCGGCCATGTTAGCTAAATTCCGGGTAGCTCGTCTGTATGGCAAAATCATCACTGCAGATCCCAAGAAAGAGCTAGAGAATTTGGCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR CCA 90 bp | TCACATTCAACACAGCAACAGGCTCTTCTACCAGGTACACTACCCAGTGTTGTTAGAGCGCTGTGGTCCTaGACAACTTCAATGTGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SHSTQQQALLPGTLPSVVRALWS*TTSMWS Trigger: TGACCACATTGAAGTTGTCCAGGACCACAGCGCTCT...AACAACACTGGGTAGTGTACCTGGTAGAAGAGCCTGTTGCTGTGTTGAATGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR GCA 90 bp | GTCATAGTACGCGTGTGCGATTTCAAACTGAATCTGCCTGCTGACCAACAGGTACTTGATCCAGCATCTTaGTATTTCCCCTTTCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: VIVRVCDFKLNLPADQQVLDPAS*YFPFPL Trigger: CAGAGGAAAGGGGAAATAGCAAGATGCTGGATCAAG...TACCTGTTGGTCAGCAGGCAGATTCAGTTTGAAATCGCACACGCGTACTATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
||
| 3UTR-3UTR TCA 90 bp | GAACAGAGCGCTGTGGTCCTGGACAACTTCAATGTGGTCAGTGACATACCCATCACAAAGAATGACATCTaGAGTGACTTTCTCACATTC | + |
|
Preference number: 2 (lower is better) Translates to: EQSAVVLDNFNVVSDIPITKNDI*SDFLTF Trigger: GAATGTGAGAAAGTCACTTCAGATGTCATTCTTTGT...GATGGGTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAGCGCTCTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR GCA 90 bp | GAACAGAGCGCTGTGGTCCTGGACAACTTCAATGTGGTCAGTGACATACCCATCACAAGCGATCGAAAATaGAAAACACCTGTCACTTTA | + |
|
Preference number: 2 (lower is better) Translates to: EQSAVVLDNFNVVSDIPITSDRK*KTPVTL Trigger: TAAAGTGACAGGTGTTTTGCATTTTCGATCGCTTGT...GATGGGTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAGCGCTCTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR GCA 90 bp | TCACATTCAACACAGCAACAGGCTCTTCTACCAGGTACACTACCCAGTGTTGTTGTCATAGTACGCGTGTaGGATTTCAAACTGAATCTG | + |
|
Preference number: 2 (lower is better) Translates to: SHSTQQQALLPGTLPSVVVIVRV*DFKLNL Trigger: CAGATTCAGTTTGAAATCGCACACGCGTACTATGAC...AACAACACTGGGTAGTGTACCTGGTAGAAGAGCCTGTTGCTGTGTTGAATGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR TCA 90 bp | GTCATAGTACGCGTGTGCGATTTCAAACTGAATCTGCCTGCTGACCAACAGGTAGTGTTGTTCCTAGTATaGAATCTAACAAGTACTGTC | + |
|
Preference number: 2 (lower is better) Translates to: VIVRVCDFKLNLPADQQVVLFLV*NLTSTV Trigger: GACAGTACTTGTTAGATTTCATACTAGGAACAACAC...TACCTGTTGGTCAGCAGGCAGATTCAGTTTGAAATCGCACACGCGTACTATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCAAGGACTTAACATTTAGAACTCTAGGCAGGAGATGTTTATACTTAAACAGGCACGTCTCTTTCCTTTaGCCAAGGCTTAGGTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SKDLTFRTLGRRCLYLNRHVSFL*PRLRSG Trigger: CCCTGACCTAAGCCTTGGTCAAAGGAAAGAGACGTG...CCTGTTTAAGTATAAACATCTCCTGCCTAGAGTTCTAAATGTTAAGTCCTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTAGGCAGGAGATGTTTATACTTAAACAGGAAAACAAGCGATCGAAAATGCAATCCCCAGTTCCAAACTaGACAGCCCTTTTCCTGACG | + |
|
Preference number: 2 (lower is better) Translates to: SRQEMFILKQENKRSKMQSPVPN*TALFLT Trigger: CGTCAGGAAAAGGGCTGTGCAGTTTGGAACTGGGGA...TTGCATTTTCGATCGCTTGTTTTCCTGTTTAAGTATAAACATCTCCTGCCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR GCA 90 bp | AGCAAGGACTTAACATTTAGAACTCTAGGCAGGAGATGTTTATACTTAAACAGGTCCCCAGTTCCAAACTaGACAGCCCTTTTCCTGACG | + |
|
Preference number: 2 (lower is better) Translates to: SKDLTFRTLGRRCLYLNRSPVPN*TALFLT Trigger: CGTCAGGAAAAGGGCTGTGCAGTTTGGAACTGGGGA...CCTGTTTAAGTATAAACATCTCCTGCCTAGAGTTCTAAATGTTAAGTCCTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR TCA 90 bp | AGCAAGGACTTAACATTTAGAACTCTAGGCAGGAGATGTTTATACTTAAACAGGAGAGCTGGTAGTACTTaGGTGCCGACTTATTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SKDLTFRTLGRRCLYLNRRAGST*VPTYSG Trigger: GCCTGAATAAGTCGGCACTCAAGTACTACCAGCTCT...CCTGTTTAAGTATAAACATCTCCTGCCTAGAGTTCTAAATGTTAAGTCCTTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGGACTTAACATTTAGAACTCTAGGCAGGAGATGTTTATACTTAAACAGGTCTCCTATGTTGTCCTaGATGGAGAGCTGCGCGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SKDLTFRTLGRRCLYLNRSPMLS*MESCAF Trigger: AAACGCGCAGCTCTCCATGCAGGACAACATAGGAGA...CCTGTTTAAGTATAAACATCTCCTGCCTAGAGTTCTAAATGTTAAGTCCTTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
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| 3UTR-3UTR CCA 90 bp | ACACTCTCAAACATAGTTACACACACAGATCTCTCCACACACACATACTATACAAGGGAACAAGCTATATaGTGTGTTCTGTGGACACAG | + |
|
Preference number: 2 (lower is better) Translates to: TLSNIVTHTDLSTHTYYTREQAI*CVLWTQ Trigger: CTGTGTCCACAGAACACACCATATAGCTTGTTCCCT...TGTATAGTATGTGTGTGTGGAGAGATCTGTGTGTGTAACTATGTTTGAGAGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
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| 3UTR GCA 72 bp | GGACACAGTAAGGCCGATGTTCAGCAGTGGAGTGCTTaGTTCCTAGGTGAGGAGGGCAGGGGCTCATCACGG | + |
|
Preference number: 3 (lower is better) Translates to: GHSKADVQQWSA*FLGEEGRGSSR Trigger: CCGTGATGAGCCCCTGCCCTCCTCACCTAGGAAGCAAGCACTCCACTGCTGAACATCGGCCTTACTGTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159704.8 ENSMUST00000162759.6 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGGCCTCATTTGCTATAGGGGAGGGGAGTGGCTTCAAGCTGCACGTCTCTCTGCGCTTGTGCATCTaGCACCGTCTCTCCATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GWASFAIGEGSGFKLHVSLRLCI*HRLSMS Trigger: TGACATGGAGAGACGGTGCAAGATGCACAAGCGCAG...AGAGACGTGCAGCTTGAAGCCACTCCCCTCCCCTATAGCAAATGAGGCCCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR GCA 72 bp | GCAGAGATGGCGTCGCACAGCTCCCCAGTTCCAAACTaGACAGCCCTTTTCCTGACGCTCTCCTCCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: AEMASHSSPVPN*TALFLTLSSSS Trigger: AGATGAGGAGGAGAGCGTCAGGAAAAGGGCTGTGCAGTTTGGAACTGGGGAGCTGTGCGACGCCATCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR GCA 72 bp | GCTAACATGGCCGGGCGGAGGACGTCTTCCCCGATGTaGTCAGGAAAGACTTTGTTTGGGTCTCTCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ANMAGRRTSSPM*SGKTLFGSLRE Trigger: CTCCCTGAGAGACCCAAACAAAGTCTTTCCTGAGCACATCGGGGAAGACGTCCTCCGCCCGGCCATGTTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
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| 3UTR CCA 72 bp | GTGTTCTGTGGACACAGTAAGGCCGATGTTCAGCAGTaGAGTGCTTGCTTCCTAGGTGAGGAGGGCAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: VFCGHSKADVQQ*SACFLGEEGRG Trigger: GCCCCTGCCCTCCTCACCTAGGAAGCAAGCACTCCACTGCTGAACATCGGCCTTACTGTGTCCACAGAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159704.8 ENSMUST00000162759.6 |
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| 3UTR-3UTR CAA 90 bp | CGGGCGGAGGACGTCTTCCCCGATGTGCTCAGGAAAGACTTTGTTTGGGTCTCTCTGCGCTTGTGCATCTaGCACCGTCTCTCCATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RAEDVFPDVLRKDFVWVSLRLCI*HRLSMS Trigger: TGACATGGAGAGACGGTGCAAGATGCACAAGCGCAG...AGAGACCCAAACAAAGTCTTTCCTGAGCACATCGGGGAAGACGTCCTCCGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR GCA 72 bp | TCAGGTCCACAGTCAGGGGCTCTAGCATGGCTATCCTaGGCTTGTGCATCTTGCACCGTCTCTCCATGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGPQSGALAWLS*ACASCTVSPCQ Trigger: CTGACATGGAGAGACGGTGCAAGATGCACAAGCGCAGGATAGCCATGCTAGAGCCCCTGACTGTGGACCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR CCA 72 bp | ACTGTGGGTTCAGGTCCACAGTCAGGGGCTCTAGCATaGCTATCCTGCGCTTGTGCATCTTGCACCGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TVGSGPQSGALA*LSCACASCTVS Trigger: AGAGACGGTGCAAGATGCACAAGCGCAGGATAGCCATGCTAGAGCCCCTGACTGTGGACCTGAACCCACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR GCA 72 bp | GGGGCTCTAGCATGGCTATCCTGCGCTTGTGCATCTTaGACCGTCTCTCCATGTCAGCCTCAAAGAACGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GALAWLSCACAS*TVSPCQPQRTR Trigger: TCTCGTTCTTTGAGGCTGACATGGAGAGACGGTGCAAGATGCACAAGCGCAGGATAGCCATGCTAGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR CCA 72 bp | GCCTCAAGTATCTCACTTTCTCCTCCACTGCAGAGATaGCGTCGCACAGCTCCCCAGTTCCAAACTGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: ASSISLSPPLQR*RRTAPQFQTAQ Trigger: CTGTGCAGTTTGGAACTGGGGAGCTGTGCGACGCCATCTCTGCAGTGGAGGAGAAAGTGAGATACTTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR TCA 72 bp | TCTCCTCCTCATCTAGCTCCTTCTTGCGTAGAGCTCTaGGCTCCGACTGCTTGTCCAGGTCAAGCTCTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: SPPHLAPSCVEL*APTACPGQALL Trigger: TAGGAGAGCTTGACCTGGACAAGCAGTCGGAGCTCAGAGCTCTACGCAAGAAGGAGCTAGATGAGGAGGAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
||
| 3UTR GCA 72 bp | TTCCATGGTCACTTTGTCACTCTAGCTGTGGTAGAATaGTTGTGGGGCTCCAGTCTCAGTCCCCAGCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: FHGHFVTLAVVE*LWGSSLSPQHP Trigger: TGGGTGCTGGGGACTGAGACTGGAGCCCCACAAGCATTCTACCACAGCTAGAGTGACAAAGTGACCATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| 3UTR GCA 72 bp | GACTGCTTGTCCAGGTCAAGCTCTCCTATGTTGTCCTaGATGGAGAGCTGCGCGTTTTGCATCAGAGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DCLSRSSSPMLS*MESCAFCIRVR Trigger: CCTGACTCTGATGCAAAACGCGCAGCTCTCCATGCAGGACAACATAGGAGAGCTTGACCTGGACAAGCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
||
| 3UTR GCA 72 bp | TCTAGCTCCTTCTTGCGTAGAGCTCTGAGCTCCGACTaGTTGTCCAGGTCAAGCTCTCCTATGTTGTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SSSFLRRALSSD*LSRSSSPMLSC Trigger: GCAGGACAACATAGGAGAGCTTGACCTGGACAAGCAGTCGGAGCTCAGAGCTCTACGCAAGAAGGAGCTAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
||
| 3UTR CCA 72 bp | GCTTGTCCAGGTCAAGCTCTCCTATGTTGTCCTGCATaGAGAGCTGCGCGTTTTGCATCAGAGTCAGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ACPGQALLCCPA*RAARFASESGS Trigger: ACTGCCTGACTCTGATGCAAAACGCGCAGCTCTCCATGCAGGACAACATAGGAGAGCTTGACCTGGACAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGAACAAGCTATATGGTGTGTTCTGTGGACACAGTAAGGCCGATGTTCAGGAAACCAGGGAAGAATaGTCCTTCTGCTGCCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PGNKLYGVFCGHSKADVQETREE*SFCCQG Trigger: CCCCTGGCAGCAGAAGGACAATTCTTCCCTGGTTTC...CTGAACATCGGCCTTACTGTGTCCACAGAACACACCATATAGCTTGTTCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159704.8 ENSMUST00000162759.6 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCACATTCAACACAGCAACAGGCTCTTCTACCAGGTACACTACCCAGTGTTTCGGGGTCCCTGAGCTaGTCAGCAATGGCGACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FSHSTQQQALLPGTLPSVSGSLS*SAMATF Trigger: GAAGGTCGCCATTGCTGACAAGCTCAGGGACCCCGA...AACACTGGGTAGTGTACCTGGTAGAAGAGCCTGTTGCTGTGTTGAATGTGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGAGTGGCTTCAAGCTGCACGTCTCTTTCCTTTGACCAAGGCTTAGGTCAGCAGGAAAGACTTTGTTaGGGTCTCTCAGGGAGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: RGVASSCTSLSFDQGLGQQERLC*GLSGSL Trigger: TAGACTCCCTGAGAGACCCAAACAAAGTCTTTCCTG...CTGACCTAAGCCTTGGTCAAAGGAAAGAGACGTGCAGCTTGAAGCCACTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR TCA 72 bp | GAGCGCTGTGGTCCTGGACAACTTCAATGTGGTCAGTaGCATACCCATCGATCTGGAAGAACTCCTTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ERCGPGQLQCGQ*HTHRSGRTPLP Trigger: AGGCAAAGGAGTTCTTCCAGATCGATGGGTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAGCGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR TCA 72 bp | GTCTCTCCATGTCAGCCTCAAAGAACGAGAGCACCTTaGACAGAGCGCTGTGGTCCTGGACAACTTCAATGT | + |
|
Preference number: 3 (lower is better) Translates to: VSPCQPQRTRAP*TERCGPGQLQC Trigger: ACATTGAAGTTGTCCAGGACCACAGCGCTCTGTTCAAGGTGCTCTCGTTCTTTGAGGCTGACATGGAGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR TCA 72 bp | AGTACGCGTGTGCGATTTCAAACTGAATCTGCCTGCTaGCCAACAGGTAGTACTGTGGGTTCAGGTCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: STRVRFQTESAC*PTGSTVGSGPQ Trigger: CTGTGGACCTGAACCCACAGTACTACCTGTTGGTCAGCAGGCAGATTCAGTTTGAAATCGCACACGCGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR CCA 72 bp | ATACTGCAGAATGCTCTAGAATGCCCCTGCTATCTGTaGGGCTATCTCCATGGTAAGGGAGCCACACCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: ILQNALECPCYL*GYLHGKGATPD Trigger: ATCAGGTGTGGCTCCCTTACCATGGAGATAGCCCCACAGATAGCAGGGGCATTCTAGAGCATTCTGCAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| 3UTR CCA 72 bp | AAGAACGAGAGCACCTTGAACAGAGCGCTGTGGTCCTaGACAACTTCAATGTGGTCAGTGACATACCCATCG | + |
|
Preference number: 3 (lower is better) Translates to: KNESTLNRALWS*TTSMWSVTYPS Trigger: CGATGGGTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAGCGCTCTGTTCAAGGTGCTCTCGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR CCA 72 bp | GCCTCAAAGAACGAGAGCACCTTGAACAGAGCGCTGTaGTCCTGGACAACTTCAATGTGGTCAGTGACATAC | + |
|
Preference number: 3 (lower is better) Translates to: ASKNESTLNRAL*SWTTSMWSVTY Trigger: GTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAGCGCTCTGTTCAAGGTGCTCTCGTTCTTTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR TCA 72 bp | TTTGGAGATAGTTTGCTGAAGGGGGTCACAGTTTGCTaGTGGGGTTGCAACCCACAGGTTGAGAACCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: FGDSLLKGVTVC*WGCNPQVENHC Trigger: ACAGTGGTTCTCAACCTGTGGGTTGCAACCCCATCAGCAAACTGTGACCCCCTTCAGCAAACTATCTCCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| 3UTR GCA 72 bp | GGCGACCTTCAAGTCCATCATGTCATAGTACGCGTGTaGGATTTCAAACTGAATCTGCCTGCTGACCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: GDLQVHHVIVRV*DFKLNLPADQQ Trigger: CTGTTGGTCAGCAGGCAGATTCAGTTTGAAATCGCACACGCGTACTATGACATGATGGACTTGAAGGTCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR GCA 72 bp | TCTCCTATGTTGTCCTGCATGGAGAGCTGCGCGTTTTaGATCAGAGTCAGGCAGTACTTGATCCAGCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: SPMLSCMESCAF*IRVRQYLIQHL Trigger: AAGATGCTGGATCAAGTACTGCCTGACTCTGATGCAAAACGCGCAGCTCTCCATGCAGGACAACATAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCAAGTCCATCATGTCATAGTACGCGTGTGCGATTTCAAACTGAATCTGCCTCAAGCTCTCCTATGTaGTCCTGCATGGAGAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PSSPSCHSTRVRFQTESASSSPM*SCMESC Trigger: GCAGCTCTCCATGCAGGACAACATAGGAGAGCTTGA...GGCAGATTCAGTTTGAAATCGCACACGCGTACTATGACATGATGGACTTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
||
| 3UTR TCA 72 bp | AGCCACATCGAAAGTTCAAATTCGAGGCCAGCTAGGTaGGACCTTGGCTCAACAAACCAGGGAACAAGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: SHIESSNSRPAR*DLGSTNQGTSY Trigger: ATAGCTTGTTCCCTGGTTTGTTGAGCCAAGGTCTCACCTAGCTGGCCTCGAATTTGAACTTTCGATGTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159704.8 ENSMUST00000162759.6 |
||
| 3UTR TCA 72 bp | AGAGCTGCGCGTTTTGCATCAGAGTCAGGCAGTACTTaGTCCAGCATCTTGCTATTTCCCCTTTCCTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: RAARFASESGST*SSILLFPLSSD Trigger: ATCAGAGGAAAGGGGAAATAGCAAGATGCTGGATCAAGTACTGCCTGACTCTGATGCAAAACGCGCAGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
||
| 3UTR GCA 72 bp | TTGCATCAGAGTCAGGCAGTACTTGATCCAGCATCTTaGTATTTCCCCTTTCCTCTGATGGTAAAGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LHQSQAVLDPAS*YFPFPLMVKLW Trigger: CCAGAGCTTTACCATCAGAGGAAAGGGGAAATAGCAAGATGCTGGATCAAGTACTGCCTGACTCTGATGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
||
| 3UTR GCA 72 bp | AGTACAGTACAGATGAACTTGAGGAATACTGCAGAATaGTCTAGAATGCCCCTGCTATCTGTGGGGCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: STVQMNLRNTAE*SRMPLLSVGLS Trigger: AGATAGCCCCACAGATAGCAGGGGCATTCTAGAGCATTCTGCAGTATTCCTCAAGTTCATCTGTACTGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTACTGTCAGCAAGGACTTAACATTTAGAACTCTAGGCAGGAGATGTTTATACTGCTCAGGAAAGACTTaGTTTGGGTCTCTCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: STVSKDLTFRTLGRRCLYCSGKT*FGSLRE Trigger: CTCCCTGAGAGACCCAAACAAAGTCTTTCCTGAGCA...GTATAAACATCTCCTGCCTAGAGTTCTAAATGTTAAGTCCTTGCTGACAGTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR TCA 72 bp | TCTGTCAAGATTAAGTTAGGAGAAAAAGGGTCTATTTaGGCTCACAGTTTGGGGACAGTCTATCAAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SVKIKLGEKGSI*AHSLGTVYQGR Trigger: CCTGCCTTGATAGACTGTCCCCAAACTGTGAGCTCAAATAGACCCTTTTTCTCCTAACTTAATCTTGACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| 3UTR CCA 72 bp | GAGAAAAGTAAGCTAGAATTTGTTGCCATCAATTCGTaGATTCCATGGTCACTTTGTCACTCTAGCTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: EKSKLEFVAINS*IPWSLCHSSCG Trigger: ACCACAGCTAGAGTGACAAAGTGACCATGGAATCCACGAATTGATGGCAACAAATTCTAGCTTACTTTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| 3UTR TCA 72 bp | CTCCATTGTTGCAAATTAACACTAACCATCAAAGGTTaGACCCAGGACTTTGTGTGTGCTCAAACTCACATA | + |
|
Preference number: 3 (lower is better) Translates to: LHCCKLTLTIKG*TQDFVCAQTHI Trigger: TATGTGAGTTTGAGCACACACAAAGTCCTGGGTTCAACCTTTGATGGTTAGTGTTAATTTGCAACAATGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| CDS-3UTR GCA 90 bp | ATAGACTCGGGTACCTGCCTGCTTCTGGAGCCCAGAGTGCATCCCTCTGGCCCTTTCTCCGGGTTCTTGTaGAGCTCCACCCGCGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: IDSGTCLLLEPRVHPSGPFSGFL*SSTRDR Trigger: CCTGTCGCGGGTGGAGCTGCACAAGAACCCGGAGAA...AGGGCCAGAGGGATGCACTCTGGGCTCCAGAAGCAGGCAGGTACCCGAGTCTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065887.14 ENSMUST00000162525.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTGGAGTGCTTGCTTCCTAGGTGAGGAGGGCAGGGGCTCATCACGGTGGGCACAGCCCTTTTCCTaGCGCTCTCCTCCTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: QQWSACFLGEEGRGSSRWAQPFS*RSPPHL Trigger: TAGATGAGGAGGAGAGCGTCAGGAAAAGGGCTGTGC...CCACCGTGATGAGCCCCTGCCCTCCTCACCTAGGAAGCAAGCACTCCACTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| CDS-3UTR GCA 90 bp | CGGGTACCTGCCTGCTTCTGGAGCCCAGAGTGCATCCCTCTGGCCCTGGCGAAGTTTCAGACCACAGGATaGCCAGGTTATTCTGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVPACFWSPECIPLALAKFQTTG*PGYSAP Trigger: AGGCGCAGAATAACCTGGGCATCCTGTGGTCTGAAA...CTTCGCCAGGGCCAGAGGGATGCACTCTGGGCTCCAGAAGCAGGCAGGTACCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065887.14 ENSMUST00000162525.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCTGCCAGGGGTAGGAGCCCTGGCACTGCTGGCCACTTCCGGGAGGAACTTTCAGACCACAGGATaGCCAGGTTATTCTGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLPGVGALALLATSGRNFQTTG*PGYSAP Trigger: AGGCGCAGAATAACCTGGGCATCCTGTGGTCTGAAA...GTTCCTCCCGGAAGTGGCCAGCAGTGCCAGGGCTCCTACCCCTGGCAGCAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTGCTGCCAGGGGTAGGAGCCCTGGCACTGCTGGCCACTTCCGGGAGGAACCTATGTTGTCCTGCATaGAGAGCTGCGCGTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLPGVGALALLATSGRNLCCPA*RAARFA Trigger: TGCAAAACGCGCAGCTCTCCATGCAGGACAACATAG...GTTCCTCCCGGAAGTGGCCAGCAGTGCCAGGGCTCCTACCCCTGGCAGCAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCCCTGGCGAAGGTGACTGTGGGGCTGGGCCTCATTTGCTATAGGGGAGGGAGAGCTGGTAGTACTTaGGTGCCGACTTATTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LALAKVTVGLGLICYRGGRAGST*VPTYSG Trigger: GCCTGAATAAGTCGGCACTCAAGTACTACCAGCTCT...CCCTCCCCTATAGCAAATGAGGCCCAGCCCCACAGTCACCTTCGCCAGGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS-3UTR GCA 90 bp | CTGGTCCTTGGGAGGTGGAAGCAGGAGGATCAGGAGTTCAAGGTCATCCTTAGCCGACAGGGCCAGCGCTaGCTGGAACTTCTCGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LVLGRWKQEDQEFKVILSRQGQR*LELLAD Trigger: ATCCGCGAGAAGTTCCAGGCAGCGCTGGCCCTGTCG...GCTAAGGATGACCTTGAACTCCTGATCCTCCTGCTTCCACCTCCCAAGGACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGGAGTGCTTGCTTCCTAGGTGAGGAGGGCAGGGGCTCATCACGGTGGTCCTCCGTGTCGATGTaGTTCACACCAAGGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QQWSACFLGEEGRGSSRWSSVSM*FTPRWN Trigger: GTTCCACCTTGGTGTGAACCACATCGACACGGAGGA...CCACCGTGATGAGCCCCTGCCCTCCTCACCTAGGAAGCAAGCACTCCACTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCCCTGGCGAAGGTGACTGTGGGGCTGGGCCTCATTTGCTATAGGGGAGGGAGAGCGCTGTGGTCCTaGACAACTTCAATGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LALAKVTVGLGLICYRGGRALWS*TTSMWS Trigger: TGACCACATTGAAGTTGTCCAGGACCACAGCGCTCT...CCCTCCCCTATAGCAAATGAGGCCCAGCCCCACAGTCACCTTCGCCAGGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS-3UTR CCA 90 bp | ATAGACTCGGGTACCTGCCTGCTTCTGGAGCCCAGAGTGCATCCCTCTGGCCCTTCAGGGGCTCTAGCATaGCTATCCTGCGCTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IDSGTCLLLEPRVHPSGPSGALA*LSCACA Trigger: TGCACAAGCGCAGGATAGCCATGCTAGAGCCCCTGA...AGGGCCAGAGGGATGCACTCTGGGCTCCAGAAGCAGGCAGGTACCCGAGTCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS-3UTR CCA 90 bp | CAGTGGAGTGCTTGCTTCCTAGGTGAGGAGGGCAGGGGCTCATCACGGTGGGACAGGCACAGTTCTGCATaGAGAGCTGCGCGTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QWSACFLGEEGRGSSRWDRHSSA*RAARFA Trigger: TGCAAAACGCGCAGCTCTCCATGCAGAACTGTGCCT...GTCCCACCGTGATGAGCCCCTGCCCTCCTCACCTAGGAAGCAAGCACTCCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162759.6 |
||
| CDS-3UTR TCA 90 bp | TGGGCCTCATTTGCTATAGGGGAGGGGAGTGGCTTCAAGCTGCACGTCTCTTTCGTGAGTCGGGGTCCCTaGGCTTGTCAGCAATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: WASFAIGEGSGFKLHVSFVSRGP*ACQQWR Trigger: TCGCCATTGCTGACAAGCTCAGGGACCCCGACTCAC...GAAAGAGACGTGCAGCTTGAAGCCACTCCCCTCCCCTATAGCAAATGAGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCTGCCAGGGGTAGGAGCCCTGGCACTGCTGGCCACTTCCGGGAGGAACCTTGATCCAGCATCTTaGTATTTCCCCTTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPGVGALALLATSGRNLDPAS*YFPFPL Trigger: CAGAGGAAAGGGGAAATAGCAAGATGCTGGATCAAG...GTTCCTCCCGGAAGTGGCCAGCAGTGCCAGGGCTCCTACCCCTGGCAGCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159704.8 ENSMUST00000162759.6 |
||
| CDS-3UTR GCA 90 bp | ATAGACTCGGGTACCTGCCTGCTTCTGGAGCCCAGAGTGCATCCCTCTGGCCCTTCCCCAGTTCCAAACTaGACAGCCCTTTTCCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: IDSGTCLLLEPRVHPSGPSPVPN*TALFLT Trigger: CGTCAGGAAAAGGGCTGTGCAGTTTGGAACTGGGGA...AGGGCCAGAGGGATGCACTCTGGGCTCCAGAAGCAGGCAGGTACCCGAGTCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| 3UTR CAA 72 bp | TCCACAGTCAGGGGCTCTAGCATGGCTATCCTGCGCTaGTGCATCTTGCACCGTCTCTCCATGTCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: STVRGSSMAILR*CILHRLSMSAS Trigger: TGAGGCTGACATGGAGAGACGGTGCAAGATGCACAAGCGCAGGATAGCCATGCTAGAGCCCCTGACTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| CDS-3UTR GCA 90 bp | GACATACCCATCGATCTGGAAGAACTCCTTTGCCTCACACACATAGTGCTGACCCGACAGGGCCAGCGCTaGCTGGAACTTCTCGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DIPIDLEELLCLTHIVLTRQGQR*LELLAD Trigger: ATCCGCGAGAAGTTCCAGGCAGCGCTGGCCCTGTCG...GGTCAGCACTATGTGTGTGAGGCAAAGGAGTTCTTCCAGATCGATGGGTATGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162525.8 |
||
| CDS-3UTR GCA 90 bp | TGGGACCGGAAGTACTTAAGGAAACCAGGGAAGAATTGTCCTTCTGCTGCCAGGTTCTCCGGGTTCTTGTaGAGCTCCACCCGCGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: WDRKYLRKPGKNCPSAARFSGFL*SSTRDR Trigger: CCTGTCGCGGGTGGAGCTGCACAAGAACCCGGAGAA...CCTGGCAGCAGAAGGACAATTCTTCCCTGGTTTCCTTAAGTACTTCCGGTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCCTCATTTGCTATAGGGGAGGGGAGTGGCTTCAAGCTGCACGTCTCTTTCGCTATCCTGCGCTTGTaGATCTTGCACCGTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WASFAIGEGSGFKLHVSFAILRL*ILHRLS Trigger: GGAGAGACGGTGCAAGATGCACAAGCGCAGGATAGC...GAAAGAGACGTGCAGCTTGAAGCCACTCCCCTCCCCTATAGCAAATGAGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGCCTCATTTGCTATAGGGGAGGGGAGTGGCTTCAAGCTGCACGTCTCTCTATGTTGTCCTGCATaGAGAGCTGCGCGTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GWASFAIGEGSGFKLHVSLCCPA*RAARFA Trigger: TGCAAAACGCGCAGCTCTCCATGCAGGACAACATAG...AGAGACGTGCAGCTTGAAGCCACTCCCCTCCCCTATAGCAAATGAGGCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| 3UTR CAA 72 bp | CTTTTCCTGACGCTCTCCTCCTCATCTAGCTCCTTCTaGCGTAGAGCTCTGAGCTCCGACTGCTTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLTLSSSSSSF*RRALSSDCLSR Trigger: CCTGGACAAGCAGTCGGAGCTCAGAGCTCTACGCAAGAAGGAGCTAGATGAGGAGGAGAGCGTCAGGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR CAA 72 bp | CGGAGGACGTCTTCCCCGATGTGCTCAGGAAAGACTTaGTTTGGGTCTCTCAGGGAGTCTAGGAAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRTSSPMCSGKT*FGSLRESRKSW Trigger: CCAGCTCTTCCTAGACTCCCTGAGAGACCCAAACAAAGTCTTTCCTGAGCACATCGGGGAAGACGTCCTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| CDS-3UTR GCA 90 bp | TGGGCCTCATTTGCTATAGGGGAGGGGAGTGGCTTCAAGCTGCACGTCTCTTTCGCTGGCGTTTCAGTGTaGTGTGGCAATAATGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WASFAIGEGSGFKLHVSFAGVSV*CGNNER Trigger: CCGCTCATTATTGCCACAGCACACTGAAACGCCAGC...GAAAGAGACGTGCAGCTTGAAGCCACTCCCCTCCCCTATAGCAAATGAGGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065887.14 ENSMUST00000162525.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTTTTCCTGACGCTCTCCTCCTCATCTAGCTCCTTCTTGCGTAGAGCTCTGTCCTCCGTGTCGATGTaGTTCACACCAAGGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALFLTLSSSSSSFLRRALSSVSM*FTPRWN Trigger: GTTCCACCTTGGTGTGAACCACATCGACACGGAGGA...CAGAGCTCTACGCAAGAAGGAGCTAGATGAGGAGGAGAGCGTCAGGAAAAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162525.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCTCTGGCCCTGGCGAAGGTGACTGTGGGGCTGGGCCTCATTTGCTATAGGTGGACAACTTCAATGTaGTCAGTGACATACCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: IPLALAKVTVGLGLICYRWTTSM*SVTYPS Trigger: CGATGGGTATGTCACTGACCACATTGAAGTTGTCCA...CCTATAGCAAATGAGGCCCAGCCCCACAGTCACCTTCGCCAGGGCCAGAGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| 3UTR CAA 72 bp | CATGGTCACTTTGTCACTCTAGCTGTGGTAGAATGCTaGTGGGGCTCCAGTCTCAGTCCCCAGCACCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: HGHFVTLAVVEC*WGSSLSPQHPH Trigger: ATGTGGGTGCTGGGGACTGAGACTGGAGCCCCACAAGCATTCTACCACAGCTAGAGTGACAAAGTGACCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| 3UTR CAA 72 bp | AGCTCCGACTGCTTGTCCAGGTCAAGCTCTCCTATGTaGTCCTGCATGGAGAGCTGCGCGTTTTGCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSDCLSRSSSPM*SCMESCAFCIR Trigger: TCTGATGCAAAACGCGCAGCTCTCCATGCAGGACAACATAGGAGAGCTTGACCTGGACAAGCAGTCGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
||
| 3UTR CAA 72 bp | AGCTCCTTCTTGCGTAGAGCTCTGAGCTCCGACTGCTaGTCCAGGTCAAGCTCTCCTATGTTGTCCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSFLRRALSSDC*SRSSSPMLSCM Trigger: CATGCAGGACAACATAGGAGAGCTTGACCTGGACAAGCAGTCGGAGCTCAGAGCTCTACGCAAGAAGGAGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
||
| CDS-3UTR GCA 90 bp | TCACATTCAACACAGCAACAGGCTCTTCTACCAGGTACACTACCCAGTGTTGTTCGACAGGGCCAGCGCTaGCTGGAACTTCTCGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SHSTQQQALLPGTLPSVVRQGQR*LELLAD Trigger: ATCCGCGAGAAGTTCCAGGCAGCGCTGGCCCTGTCG...AACAACACTGGGTAGTGTACCTGGTAGAAGAGCCTGTTGCTGTGTTGAATGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065887.14 ENSMUST00000162525.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGGAGGTGGAAGCAGGAGGATCAGGAGTTCAAGGTCATCCTTAGCCACATCGCTGGCGTTTCAGTGTaGTGTGGCAATAATGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGRWKQEDQEFKVILSHIAGVSV*CGNNER Trigger: CCGCTCATTATTGCCACAGCACACTGAAACGCCAGC...GATGTGGCTAAGGATGACCTTGAACTCCTGATCCTCCTGCTTCCACCTCCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159704.8 ENSMUST00000162759.6 |
||
| 3UTR CAA 72 bp | CGTCTCTCCATGTCAGCCTCAAAGAACGAGAGCACCTaGAACAGAGCGCTGTGGTCCTGGACAACTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RLSMSASKNEST*NRALWSWTTSM Trigger: CATTGAAGTTGTCCAGGACCACAGCGCTCTGTTCAAGGTGCTCTCGTTCTTTGAGGCTGACATGGAGAGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| 3UTR CAA 72 bp | GGACGTCTTCCCCGATGTGCTCAGGAAAGACTTTGTTaGGGTCTCTCAGGGAGTCTAGGAAGAGCTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRLPRCAQERLC*GLSGSLGRAGS Trigger: ACTACCAGCTCTTCCTAGACTCCCTGAGAGACCCAAACAAAGTCTTTCCTGAGCACATCGGGGAAGACGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| CDS-3UTR GCA 90 bp | GAACGAGAGCACCTTGAACAGAGCGCTGTGGTCCTGGACAACTTCAATGTGGTCTTTCAGACCACAGGATaGCCAGGTTATTCTGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EREHLEQSAVVLDNFNVVFQTTG*PGYSAP Trigger: AGGCGCAGAATAACCTGGGCATCCTGTGGTCTGAAA...GACCACATTGAAGTTGTCCAGGACCACAGCGCTCTGTTCAAGGTGCTCTCGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162525.8 |
||
| CDS-3UTR GCA 90 bp | ACGTACTCCGTCTTTTCTCAAGTCAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGCTGGCGTTTCAGTGTaGTGTGGCAATAATGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TYSVFSQVRVSLCSPGCPAGVSV*CGNNER Trigger: CCGCTCATTATTGCCACAGCACACTGAAACGCCAGC...AGGACAGCCAGGGCTACACAGAGAAACCCTGACTTGAGAAAAGACGGAGTACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159704.8 ENSMUST00000162759.6 |
||
| CDS-3UTR GCA 90 bp | ACGGTGGGACCGGAAGTACTTAAGGAAACCAGGGAAGAATTGTCCTTCTGCTGCTCCTGCATGGAGAGCTaGGCGTTTTGCATCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TVGPEVLKETREELSFCCSCMES*AFCIRV Trigger: GACTCTGATGCAAAACGCGCAGCTCTCCATGCAGGA...GCAGCAGAAGGACAATTCTTCCCTGGTTTCCTTAAGTACTTCCGGTCCCACCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| CDS-3UTR GCA 90 bp | ATAGACTCGGGTACCTGCCTGCTTCTGGAGCCCAGAGTGCATCCCTCTGGCCCTCTCTTTCTTGGGATCTaGAGTGATGATTTTGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: IDSGTCLLLEPRVHPSGPLFLGI*SDDFAI Trigger: TATGGCAAAATCATCACTGCAGATCCCAAGAAAGAG...AGGGCCAGAGGGATGCACTCTGGGCTCCAGAAGCAGGCAGGTACCCGAGTCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
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| CDS-3UTR CCA 90 bp | CTGGGCCTCATTTGCTATAGGGGAGGGGAGTGGCTTCAAGCTGCACGTCTCTTTTTGAACAGAGCGCTGTaGTCCTGGACAACTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LGLICYRGGEWLQAARLFLNRAL*SWTTSM Trigger: CATTGAAGTTGTCCAGGACCACAGCGCTCTGTTCAA...AAAGAGACGTGCAGCTTGAAGCCACTCCCCTCCCCTATAGCAAATGAGGCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS-3UTR GCA 90 bp | CTGTGGTCCTGGACAACTTCAATGTGGTCAGTGACATACCCATCGATCTGGAAGGCTGGCGTTTCAGTGTaGTGTGGCAATAATGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LWSWTTSMWSVTYPSIWKAGVSV*CGNNER Trigger: CCGCTCATTATTGCCACAGCACACTGAAACGCCAGC...CTTCCAGATCGATGGGTATGTCACTGACCACATTGAAGTTGTCCAGGACCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162525.8 |
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| CDS-3UTR GCA 90 bp | TGGGCCTCATTTGCTATAGGGGAGGGGAGTGGCTTCAAGCTGCACGTCTCTTTCCTTGATCCAGCATCTTaGTATTTCCCCTTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WASFAIGEGSGFKLHVSFLDPAS*YFPFPL Trigger: CAGAGGAAAGGGGAAATAGCAAGATGCTGGATCAAG...GAAAGAGACGTGCAGCTTGAAGCCACTCCCCTCCCCTATAGCAAATGAGGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS-3UTR GCA 90 bp | CCAGGGAACAAGCTATATGGTGTGTTCTGTGGACACAGTAAGGCCGATGTTCAGTCCCCAGTTCCAAACTaGACAGCCCTTTTCCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: PGNKLYGVFCGHSKADVQSPVPN*TALFLT Trigger: CGTCAGGAAAAGGGCTGTGCAGTTTGGAACTGGGGA...CTGAACATCGGCCTTACTGTGTCCACAGAACACACCATATAGCTTGTTCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| 3UTR CAA 72 bp | CTCTCCTATGTTGTCCTGCATGGAGAGCTGCGCGTTTaGCATCAGAGTCAGGCAGTACTTGATCCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSYVVLHGELRV*HQSQAVLDPAS Trigger: AGATGCTGGATCAAGTACTGCCTGACTCTGATGCAAAACGCGCAGCTCTCCATGCAGGACAACATAGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162648.3 |
||
| CDS-3UTR GCA 90 bp | CTCATCACGGTGGGACCGGAAGTACTTAAGGAAACCAGGGAAGAATTGTCCTTCTCTCCTATGTTGTCCTaGATGGAGAGCTGCGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LITVGPEVLKETREELSFSPMLS*MESCAF Trigger: AAACGCGCAGCTCTCCATGCAGGACAACATAGGAGA...GAAGGACAATTCTTCCCTGGTTTCCTTAAGTACTTCCGGTCCCACCGTGATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| CDS-3UTR GCA 90 bp | GACTTTCTCACATTCAACACAGCAACAGGCTCTTCTACCAGGTACACTACCCAGCTAGCATGGCTATCCTaGGCTTGTGCATCTTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DFLTFNTATGSSTRYTTQLAWLS*ACASCT Trigger: GGTGCAAGATGCACAAGCGCAGGATAGCCATGCTAG...CTGGGTAGTGTACCTGGTAGAAGAGCCTGTTGCTGTGTTGAATGTGAGAAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS-3UTR GCA 90 bp | CTCATCACGGTGGGACCGGAAGTACTTAAGGAAACCAGGGAAGAATTGTCCTTCTTCTGCATGGAGAGCTaGGCGTTTTGCATCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LITVGPEVLKETREELSFFCMES*AFCIRV Trigger: GACTCTGATGCAAAACGCGCAGCTCTCCATGCAGAA...GAAGGACAATTCTTCCCTGGTTTCCTTAAGTACTTCCGGTCCCACCGTGATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162759.6 |
||
| CDS-3UTR GCA 90 bp | ACGTACTCCGTCTTTTCTCAAGTCAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTCTTGATCCAGCATCTTaGTATTTCCCCTTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TYSVFSQVRVSLCSPGCPLDPAS*YFPFPL Trigger: CAGAGGAAAGGGGAAATAGCAAGATGCTGGATCAAG...AGGACAGCCAGGGCTACACAGAGAAACCCTGACTTGAGAAAAGACGGAGTACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159704.8 ENSMUST00000162759.6 |
||
| CDS-3UTR GCA 90 bp | GTGACTTTCTCACATTCAACACAGCAACAGGCTCTTCTACCAGGTACACTACCCTCTCCTATGTTGTCCTaGATGGAGAGCTGCGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTFSHSTQQQALLPGTLPSPMLS*MESCAF Trigger: AAACGCGCAGCTCTCCATGCAGGACAACATAGGAGA...GGGTAGTGTACCTGGTAGAAGAGCCTGTTGCTGTGTTGAATGTGAGAAAGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS-3UTR CCA 90 bp | TCACATTCAACACAGCAACAGGCTCTTCTACCAGGTACACTACCCAGTGTTGTTCAACAGGTAGTACTGTaGGTTCAGGTCCACAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHSTQQQALLPGTLPSVVQQVVL*VQVHSQ Trigger: CTGACTGTGGACCTGAACCCACAGTACTACCTGTTG...AACAACACTGGGTAGTGTACCTGGTAGAAGAGCCTGTTGCTGTGTTGAATGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| 3UTR CAA 72 bp | GGGTCACAGTTTGCTGATGGGGTTGCAACCCACAGGTaGAGAACCACTGTTCTCCATTGTTGCAAATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: GSQFADGVATHR*RTTVLHCCKLT Trigger: TGTTAATTTGCAACAATGGAGAACAGTGGTTCTCAACCTGTGGGTTGCAACCCCATCAGCAAACTGTGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| CDS-3UTR TCA 90 bp | AGTACTGTCAGCAAGGACTTAACATTTAGAACTCTAGGCAGGAGATGTTTATACGCACAGCCCTTTTCCTaGCGCTCTCCTCCTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: STVSKDLTFRTLGRRCLYAQPFS*RSPPHL Trigger: TAGATGAGGAGGAGAGCGTCAGGAAAAGGGCTGTGC...GTATAAACATCTCCTGCCTAGAGTTCTAAATGTTAAGTCCTTGCTGACAGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS-3UTR GCA 90 bp | TCAACACAGCAACAGGCTCTTCTACCAGGTACACTACCCAGTGTTGTTCCTAGTGTCATAGTACGCGTGTaGGATTTCAAACTGAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: STQQQALLPGTLPSVVPSVIVRV*DFKLNL Trigger: CAGATTCAGTTTGAAATCGCACACGCGTACTATGAC...ACTAGGAACAACACTGGGTAGTGTACCTGGTAGAAGAGCCTGTTGCTGTGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| 3UTR CAA 72 bp | TTCTCTAGCTCTTTCTTGGGATCTGCAGTGATGATTTaGCCATACAGACGAGCTACCCGGAATTTAGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSSSFLGSAVMI*PYRRATRNLAN Trigger: GTTAGCTAAATTCCGGGTAGCTCGTCTGTATGGCAAAATCATCACTGCAGATCCCAAGAAAGAGCTAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162525.8 ENSMUST00000162648.3 |
||
| CDS-3UTR GCA 90 bp | TCTAGGCAGGAGATGTTTATACTTAAACAGGAAAACAAGCGATCGAAAATGCAATCCTGCATGGAGAGCTaGGCGTTTTGCATCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SRQEMFILKQENKRSKMQSCMES*AFCIRV Trigger: GACTCTGATGCAAAACGCGCAGCTCTCCATGCAGGA...TTGCATTTTCGATCGCTTGTTTTCCTGTTTAAGTATAAACATCTCCTGCCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGACTTAACATTTAGAACTCTAGGCAGGAGATGTTTATACTTAAACAGGTGCGCTTGTGCATCTTaGACCGTCTCTCCATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKDLTFRTLGRRCLYLNRCACAS*TVSPCQ Trigger: CTGACATGGAGAGACGGTGCAAGATGCACAAGCGCA...CCTGTTTAAGTATAAACATCTCCTGCCTAGAGTTCTAAATGTTAAGTCCTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS-3UTR GCA 90 bp | AGTACTGTCAGCAAGGACTTAACATTTAGAACTCTAGGCAGGAGATGTTTATACCTGGAAGAACTCCTTTaGCTCACACACATAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STVSKDLTFRTLGRRCLYLEELL*LTHIVL Trigger: CAGCACTATGTGTGTGAGGCAAAGGAGTTCTTCCAG...GTATAAACATCTCCTGCCTAGAGTTCTAAATGTTAAGTCCTTGCTGACAGTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS-3UTR CCA 90 bp | AGTGTTGTTCCTAGTATGAAATCTAACAAGTACTGTCAGCAAGGACTTAACATTTCCTCCGTGTCGATGTaGTTCACACCAAGGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVVPSMKSNKYCQQGLNISSVSM*FTPRWN Trigger: GTTCCACCTTGGTGTGAACCACATCGACACGGAGGA...AATGTTAAGTCCTTGCTGACAGTACTTGTTAGATTTCATACTAGGAACAACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065887.14 ENSMUST00000162525.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGGCAGGAGATGTTTATACTTAAACAGGAAAACAAGCGATCGAAAATGCAACCTCTCCATTTTTGTTaGGAGGAGACTGACCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRQEMFILKQENKRSKMQPLHFC*EETDHL Trigger: GAGATGGTCAGTCTCCTCCCAACAAAAATGGAGAGG...TTGCATTTTCGATCGCTTGTTTTCCTGTTTAAGTATAAACATCTCCTGCCTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
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| 3UTR CAA 72 bp | TCTCCATTGTTGCAAATTAACACTAACCATCAAAGGTaGAACCCAGGACTTTGTGTGTGCTCAAACTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLLQINTNHQR*NPGLCVCSNSH Trigger: ATGTGAGTTTGAGCACACACAAAGTCCTGGGTTCAACCTTTGATGGTTAGTGTTAATTTGCAACAATGGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
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| CDS CCA 90 bp | GCTCCGGGGCCCTCAGCCTCCCGGGGCTCACCCGCGCCCAAGGCCTaGTCGCCCGGCCCATCGTCAGCAGCCGGCTCGTCCTCGTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: APGPSASRGSPAPKA*SPGPSSAAGSSSSS Trigger: CGAGGACGAGGACGAGCCGGCTGCTGACGATGGGCCGGGCGACCAGGCCTTGGGCGCGGGTGAGCCCCGGGAGGCTGAGGGCCCCGGAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS CCA 90 bp | TCGCCGGCAGACAGTTCCTCCGTGTCGATGTGGTTCACACCAAGGTaGAACTCGACCACCGCGAGGCGCAGCGCCCGCTGCGCTCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPADSSSVSMWFTPR*NSTTARRSARCAPG Trigger: CCCCGGAGCGCAGCGGGCGCTGCGCCTCGCGGTGGTCGAGTTCCACCTTGGTGTGAACCACATCGACACGGAGGAACTGTCTGCCGGCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS CCA 90 bp | CCAGCAGCGCGCGCACCTCCTCCAACAGCGCGCGCGCGCCGTACTTaGACTTGTACGGCTCCTTCTCCGGGTTCTTGTGCAGCTCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: PAARAPPPTARARRT*TCTAPSPGSCAAPP Trigger: GGGTGGAGCTGCACAAGAACCCGGAGAAGGAGCCGTACAAGTCCAAGTACGGCGCGCGCGCGCTGTTGGAGGAGGTGCGCGCGCTGCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS GCA 90 bp | CTTCTCCGGGTTCTTGTGCAGCTCCACCCGCGACAGGGCCAGCGCTaGCTGGAACTTCTCGCGGATCTCTGGCCCCGGAGCGTTCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLRVLVQLHPRQGQR*LELLADLWPRSVRH Trigger: ATGGCGAACGCTCCGGGGCCAGAGATCCGCGAGAAGTTCCAGGCAGCGCTGGCCCTGTCGCGGGTGGAGCTGCACAAGAACCCGGAGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS TCA 90 bp | CACAGCCGAGCGACAGGCGGTAGGGGCGCAGCAACGACAGGCACCTaGCCAGATGCTCCTCGCCGGCAGACAGTTCCTCCGTGTCGATGT | + |
|
Preference number: 5 (lower is better) Translates to: HSRATGGRGAATTGT*PDAPRRQTVPPCRC Trigger: ACATCGACACGGAGGAACTGTCTGCCGGCGAGGAGCATCTGGTCAGGTGCCTGTCGTTGCTGCGCCCCTACCGCCTGTCGCTCGGCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS GCA 90 bp | CGCGCGCCGTACTTGGACTTGTACGGCTCCTTCTCCGGGTTCTTGTaGAGCTCCACCCGCGACAGGGCCAGCGCTGCCTGGAACTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RAPYLDLYGSFSGFL*SSTRDRASAAWNFS Trigger: CGAGAAGTTCCAGGCAGCGCTGGCCCTGTCGCGGGTGGAGCTGCACAAGAACCCGGAGAAGGAGCCGTACAAGTCCAAGTACGGCGCGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS CCA 90 bp | CTGACCAGATGCTCCTCGCCGGCAGACAGTTCCTCCGTGTCGATGTaGTTCACACCAAGGTGGAACTCGACCACCGCGAGGCGCAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTRCSSPADSSSVSM*FTPRWNSTTARRSA Trigger: GGCGCTGCGCCTCGCGGTGGTCGAGTTCCACCTTGGTGTGAACCACATCGACACGGAGGAACTGTCTGCCGGCGAGGAGCATCTGGTCAG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS-3UTR CAA 90 bp | ATAGACTCGGGTACCTGCCTGCTTCTGGAGCCCAGAGTGCATCCCTCTGGCCCTGCGCCGTACTTGGACTaGTACGGCTCCTTCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: IDSGTCLLLEPRVHPSGPAPYLD*YGSFSG Trigger: CCCGGAGAAGGAGCCGTACAAGTCCAAGTACGGCGC...AGGGCCAGAGGGATGCACTCTGGGCTCCAGAAGCAGGCAGGTACCCGAGTCTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065887.14 ENSMUST00000162525.8 |
||
| CDS-3UTR CAA 90 bp | ATAGACTCGGGTACCTGCCTGCTTCTGGAGCCCAGAGTGCATCCCTCTGGCCCTATGGCTATCCTGCGCTaGTGCATCTTGCACCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IDSGTCLLLEPRVHPSGPMAILR*CILHRL Trigger: GAGACGGTGCAAGATGCACAAGCGCAGGATAGCCAT...AGGGCCAGAGGGATGCACTCTGGGCTCCAGAAGCAGGCAGGTACCCGAGTCTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS-3UTR CAA 90 bp | CTTGGGAGGTGGAAGCAGGAGGATCAGGAGTTCAAGGTCATCCTTAGCCACATCTCCTTCTCCGGGTTCTaGTGCAGCTCCACCCGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: LGRWKQEDQEFKVILSHISFSGF*CSSTRD Trigger: GTCGCGGGTGGAGCTGCACAAGAACCCGGAGAAGGA...GATGTGGCTAAGGATGACCTTGAACTCCTGATCCTCCTGCTTCCACCTCCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| CDS-3UTR CAA 90 bp | ATCCCTCTGGCCCTGGCGAAGGTGACTGTGGGGCTGGGCCTCATTTGCTATAGGTCAAGCTCTCCTATGTaGTCCTGCATGGAGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IPLALAKVTVGLGLICYRSSSPM*SCMESC Trigger: GCAGCTCTCCATGCAGGACAACATAGGAGAGCTTGA...CCTATAGCAAATGAGGCCCAGCCCCACAGTCACCTTCGCCAGGGCCAGAGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS GCA 90 bp | GGTAGGTCCGGGCGGTTTCGATCTCTTCCCTTTCAGACCACAGGATaGCCAGGTTATTCTGCGCCTGGATGTAGAGAGACACACAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GRSGRFRSLPFQTTG*PGYSAPGCRETHSR Trigger: TCGGCTGTGTGTCTCTCTACATCCAGGCGCAGAATAACCTGGGCATCCTGTGGTCTGAAAGGGAAGAGATCGAAACCGCCCGGACCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGGAGTGCTTGCTTCCTAGGTGAGGAGGGCAGGGGCTCATCACGGTGGGACCATGTGCTGGTAGACTaGAGCCAGGTAATACAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QWSACFLGEEGRGSSRWDHVLVD*SQVIQV Trigger: AACCTGTATTACCTGGCTCAAGTCTACCAGCACATG...GTCCCACCGTGATGAGCCCCTGCCCTCCTCACCTAGGAAGCAAGCACTCCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159704.8 ENSMUST00000162759.6 |
||
| CDS-3UTR CAA 90 bp | ATCCCTCTGGCCCTGGCGAAGGTGACTGTGGGGCTGGGCCTCATTTGCTATAGGTGCTCAGGAAAGACTTaGTTTGGGTCTCTCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IPLALAKVTVGLGLICYRCSGKT*FGSLRE Trigger: CTCCCTGAGAGACCCAAACAAAGTCTTTCCTGAGCA...CCTATAGCAAATGAGGCCCAGCCCCACAGTCACCTTCGCCAGGGCCAGAGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
||
| CDS-3UTR CAA 90 bp | ATAGACTCGGGTACCTGCCTGCTTCTGGAGCCCAGAGTGCATCCCTCTGGCCCTTCAAGCTCTCCTATGTaGTCTGTCTTCTGTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IDSGTCLLLEPRVHPSGPSSSPM*SVFCSW Trigger: CCAGCTACAGAAGACAGACAACATAGGAGAGCTTGA...AGGGCCAGAGGGATGCACTCTGGGCTCCAGAAGCAGGCAGGTACCCGAGTCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162525.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAAAGACTTTGTTTGGGTCTCTCAGGGAGTCTAGGAAGAGCTGGTAGTACTTCCTTCTCCGGGTTCTaGTGCAGCTCCACCCGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: QERLCLGLSGSLGRAGSTSFSGF*CSSTRD Trigger: GTCGCGGGTGGAGCTGCACAAGAACCCGGAGAAGGA...AGTACTACCAGCTCTTCCTAGACTCCCTGAGAGACCCAAACAAAGTCTTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162525.8 |
||
| CDS-3UTR CAA 90 bp | GCCGGGCGGAGGACGTCTTCCCCGATGTGCTCAGGAAAGACTTTGTTTGGGTCTCATGTGCTGGTAGACTaGAGCCAGGTAATACAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGRRTSSPMCSGKTLFGSHVLVD*SQVIQV Trigger: AACCTGTATTACCTGGCTCAAGTCTACCAGCACATG...AGACCCAAACAAAGTCTTTCCTGAGCACATCGGGGAAGACGTCCTCCGCCCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162525.8 |
||
| CDS-3UTR CAA 90 bp | GAACCCAGGACTTTGTGTGTGCTCAAACTCACATACTACCTAGAACTAACTCTCGCGCCGTACTTGGACTaGTACGGCTCCTTCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: EPRTLCVLKLTYYLELTLAPYLD*YGSFSG Trigger: CCCGGAGAAGGAGCCGTACAAGTCCAAGTACGGCGC...GAGAGTTAGTTCTAGGTAGTATGTGAGTTTGAGCACACACAAAGTCCTGGGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| CDS-3UTR CAA 90 bp | ACGGTGGGACCGGAAGTACTTAAGGAAACCAGGGAAGAATTGTCCTTCTGCTGCTCAAGCTCTCCTATGTaGTCCTGCATGGAGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TVGPEVLKETREELSFCCSSSPM*SCMESC Trigger: GCAGCTCTCCATGCAGGACAACATAGGAGAGCTTGA...GCAGCAGAAGGACAATTCTTCCCTGGTTTCCTTAAGTACTTCCGGTCCCACCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
||
| CDS-3UTR CAA 90 bp | TCACATTCAACACAGCAACAGGCTCTTCTACCAGGTACACTACCCAGTGTTGTTTCGGGGTCCCTGAGCTaGTCAGCAATGGCGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SHSTQQQALLPGTLPSVVSGSLS*SAMATF Trigger: GAAGGTCGCCATTGCTGACAAGCTCAGGGACCCCGA...AACAACACTGGGTAGTGTACCTGGTAGAAGAGCCTGTTGCTGTGTTGAATGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
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| CDS-3UTR CAA 90 bp | CGGAAGTACTTAAGGAAACCAGGGAAGAATTGTCCTTCTGCTGCCAGGGGTAGGCATGTGCTGGTAGACTaGAGCCAGGTAATACAGGTT | + |
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Preference number: 5 (lower is better) Translates to: RKYLRKPGKNCPSAARGRHVLVD*SQVIQV Trigger: AACCTGTATTACCTGGCTCAAGTCTACCAGCACATG...CCTACCCCTGGCAGCAGAAGGACAATTCTTCCCTGGTTTCCTTAAGTACTTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159704.8 ENSMUST00000162759.6 |
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| CDS TCA 90 bp | TCTGCATGGAGAGCTGCGCGTTTTGCATCAGAGTCAGGCAGTACTTaGTCCAGCATCTTGCTATTTCCCCTTTCCTCTGATGGTAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: SAWRAARFASESGST*SSILLFPLSSDGKA Trigger: AGCTTTACCATCAGAGGAAAGGGGAAATAGCAAGATGCTGGATCAAGTACTGCCTGACTCTGATGCAAAACGCGCAGCTCTCCATGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162759.6 |
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| CDS-3UTR CAA 90 bp | GTGACTTTCTCACATTCAACACAGCAACAGGCTCTTCTACCAGGTACACTACCCCATGTGCTGGTAGACTaGAGCCAGGTAATACAGGTT | + |
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Preference number: 5 (lower is better) Translates to: VTFSHSTQQQALLPGTLPHVLVD*SQVIQV Trigger: AACCTGTATTACCTGGCTCAAGTCTACCAGCACATG...GGGTAGTGTACCTGGTAGAAGAGCCTGTTGCTGTGTTGAATGTGAGAAAGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065887.14 ENSMUST00000162525.8 |
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| CDS-3UTR CAA 90 bp | GTGACTTTCTCACATTCAACACAGCAACAGGCTCTTCTACCAGGTACACTACCCCAGGAAAGACTTTGTTaGGGTCTCTCAGGGAGTCTA | + |
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Preference number: 5 (lower is better) Translates to: VTFSHSTQQQALLPGTLPQERLC*GLSGSL Trigger: TAGACTCCCTGAGAGACCCAAACAAAGTCTTTCCTG...GGGTAGTGTACCTGGTAGAAGAGCCTGTTGCTGTGTTGAATGTGAGAAAGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
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| CDS-3UTR CAA 90 bp | TGGGCCTCATTTGCTATAGGGGAGGGGAGTGGCTTCAAGCTGCACGTCTCTTTCAATGTTCCAAAGATGTaGCCAAATTCTCTAGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: WASFAIGEGSGFKLHVSFNVPKM*PNSLAL Trigger: AAGAGCTAGAGAATTTGGCAACATCTTTGGAACATT...GAAAGAGACGTGCAGCTTGAAGCCACTCCCCTCCCCTATAGCAAATGAGGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
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| CDS-3UTR CAA 90 bp | AGTGTTGTTCCTAGTATGAAATCTAACAAGTACTGTCAGCAAGGACTTAACATTTCCTTCTCCGGGTTCTaGTGCAGCTCCACCCGCGAC | + |
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Preference number: 5 (lower is better) Translates to: SVVPSMKSNKYCQQGLNISFSGF*CSSTRD Trigger: GTCGCGGGTGGAGCTGCACAAGAACCCGGAGAAGGA...AATGTTAAGTCCTTGCTGACAGTACTTGTTAGATTTCATACTAGGAACAACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065887.14 ENSMUST00000162525.8 |
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| CDS-3UTR CAA 90 bp | AGTGTTGTTCCTAGTATGAAATCTAACAAGTACTGTCAGCAAGGACTTAACATTCTGCGCTTGTGCATCTaGCACCGTCTCTCCATGTCA | + |
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Preference number: 5 (lower is better) Translates to: SVVPSMKSNKYCQQGLNILRLCI*HRLSMS Trigger: TGACATGGAGAGACGGTGCAAGATGCACAAGCGCAG...AATGTTAAGTCCTTGCTGACAGTACTTGTTAGATTTCATACTAGGAACAACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065887.14 |
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| CDS TCA 90 bp | CCTTCAACTTCAGGAGTGTCTTCTGTAGCTGGTATTTTTCCAGTTTaGCCAAAAATAACATTAGCAGCTGACAGACAATGTCTGGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: PSTSGVSSVAGIFPV*PKITLAADRQCLAS Trigger: GGAAGCCAGACATTGTCTGTCAGCTGCTAATGTTATTTTTGGTCAAACTGGAAAAATACCAGCTACAGAAGACACTCCTGAAGTTGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162759.6 |
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| CDS TCA 90 bp | GCTCTCCTATGTTGTCTGTCTTCTGTAGCTGGTATTTTTCCAGTTTaGCCAAAAATAACATTAGCAGCTGACAGACAATGTCTGGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: ALLCCLSSVAGIFPV*PKITLAADRQCLAS Trigger: GGAAGCCAGACATTGTCTGTCAGCTGCTAATGTTATTTTTGGTCAAACTGGAAAAATACCAGCTACAGAAGACAGACAACATAGGAGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162525.8 |
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| CDS CCA 72 bp | CCCTCAGCCTCCCGGGGCTCACCCGCGCCCAAGGCCTaGTCGCCCGGCCCATCGTCAGCAGCCGGCTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: PSASRGSPAPKA*SPGPSSAAGSS Trigger: GGACGAGCCGGCTGCTGACGATGGGCCGGGCGACCAGGCCTTGGGCGCGGGTGAGCCCCGGGAGGCTGAGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS CAA 90 bp | AGCGCGCGCACCTCCTCCAACAGCGCGCGCGCGCCGTACTTGGACTaGTACGGCTCCTTCTCCGGGTTCTTGTGCAGCTCCACCCGCGAC | + |
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Preference number: 6 (lower is better) Translates to: SARTSSNSARAPYLD*YGSFSGFLCSSTRD Trigger: GTCGCGGGTGGAGCTGCACAAGAACCCGGAGAAGGAGCCGTACAAGTCCAAGTACGGCGCGCGCGCGCTGTTGGAGGAGGTGCGCGCGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS CAA 90 bp | CCCAGCAGCGCGCGCACCTCCTCCAACAGCGCGCGCGCGCCGTACTaGGACTTGTACGGCTCCTTCTCCGGGTTCTTGTGCAGCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: PSSARTSSNSARAPY*DLYGSFSGFLCSST Trigger: GGTGGAGCTGCACAAGAACCCGGAGAAGGAGCCGTACAAGTCCAAGTACGGCGCGCGCGCGCTGTTGGAGGAGGTGCGCGCGCTGCTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS CAA 90 bp | GCGCGCGCGCCGTACTTGGACTTGTACGGCTCCTTCTCCGGGTTCTaGTGCAGCTCCACCCGCGACAGGGCCAGCGCTGCCTGGAACTTC | + |
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Preference number: 6 (lower is better) Translates to: ARAPYLDLYGSFSGF*CSSTRDRASAAWNF Trigger: GAAGTTCCAGGCAGCGCTGGCCCTGTCGCGGGTGGAGCTGCACAAGAACCCGGAGAAGGAGCCGTACAAGTCCAAGTACGGCGCGCGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS CAA 72 bp | GCGCGCACCTCCTCCAACAGCGCGCGCGCGCCGTACTaGGACTTGTACGGCTCCTTCTCCGGGTTCTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: ARTSSNSARAPY*DLYGSFSGFLC Trigger: GCACAAGAACCCGGAGAAGGAGCCGTACAAGTCCAAGTACGGCGCGCGCGCGCTGTTGGAGGAGGTGCGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS CCA 72 bp | CGCGCACCTCCTCCAACAGCGCGCGCGCGCCGTACTTaGACTTGTACGGCTCCTTCTCCGGGTTCTTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: RAPPPTARARRT*TCTAPSPGSCA Trigger: TGCACAAGAACCCGGAGAAGGAGCCGTACAAGTCCAAGTACGGCGCGCGCGCGCTGTTGGAGGAGGTGCGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS CCA 72 bp | GACAGTTCCTCCGTGTCGATGTGGTTCACACCAAGGTaGAACTCGACCACCGCGAGGCGCAGCGCCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: DSSSVSMWFTPR*NSTTARRSARC Trigger: GCAGCGGGCGCTGCGCCTCGCGGTGGTCGAGTTCCACCTTGGTGTGAACCACATCGACACGGAGGAACTGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS CAA 72 bp | CCGTACTTGGACTTGTACGGCTCCTTCTCCGGGTTCTaGTGCAGCTCCACCCGCGACAGGGCCAGCGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PYLDLYGSFSGF*CSSTRDRASAA Trigger: GGCAGCGCTGGCCCTGTCGCGGGTGGAGCTGCACAAGAACCCGGAGAAGGAGCCGTACAAGTCCAAGTACGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS GCA 72 bp | TACTTGGACTTGTACGGCTCCTTCTCCGGGTTCTTGTaGAGCTCCACCCGCGACAGGGCCAGCGCTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: YLDLYGSFSGFL*SSTRDRASAAW Trigger: CCAGGCAGCGCTGGCCCTGTCGCGGGTGGAGCTGCACAAGAACCCGGAGAAGGAGCCGTACAAGTCCAAGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS CAA 72 bp | ACCTCCTCCAACAGCGCGCGCGCGCCGTACTTGGACTaGTACGGCTCCTTCTCCGGGTTCTTGTGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: TSSNSARAPYLD*YGSFSGFLCSS Trigger: GGAGCTGCACAAGAACCCGGAGAAGGAGCCGTACAAGTCCAAGTACGGCGCGCGCGCGCTGTTGGAGGAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS CCA 72 bp | TGCTCCTCGCCGGCAGACAGTTCCTCCGTGTCGATGTaGTTCACACCAAGGTGGAACTCGACCACCGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: CSSPADSSSVSM*FTPRWNSTTAR Trigger: CCTCGCGGTGGTCGAGTTCCACCTTGGTGTGAACCACATCGACACGGAGGAACTGTCTGCCGGCGAGGAGCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS GCA 72 bp | CCCAGAGAAGAGACAGGCACAGTTTTTCTCCTCCACTaGAGAGATGGCGTCGCACAGCTCCCCAGTTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: PREETGTVFLLH*RDGVAQLPSSK Trigger: TTTGGAACTGGGGAGCTGTGCGACGCCATCTCTGCAGTGGAGGAGAAAAACTGTGCCTGTCTCTTCTCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
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| CDS CCA 72 bp | AGAGACAGGCACAGTTTTTCTCCTCCACTGCAGAGATaGCGTCGCACAGCTCCCCAGTTCCAAACTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: RDRHSFSPPLQR*RRTAPQFQTAQ Trigger: CTGTGCAGTTTGGAACTGGGGAGCTGTGCGACGCCATCTCTGCAGTGGAGGAGAAAAACTGTGCCTGTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159704.8 |
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| CDS GCA 72 bp | GGGCGGTTTCGATCTCTTCCCTTTCAGACCACAGGATaGCCAGGTTATTCTGCGCCTGGATGTAGAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: GRFRSLPFQTTG*PGYSAPGCRET Trigger: TGTCTCTCTACATCCAGGCGCAGAATAACCTGGGCATCCTGTGGTCTGAAAGGGAAGAGATCGAAACCGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 |
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| CDS GCA 72 bp | CCAGAGAAGAGACAGGCACAGTTCTGCATGGAGAGCTaGGCGTTTTGCATCAGAGTCAGGCAGTACTTGATC | + |
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Preference number: 6 (lower is better) Translates to: PEKRQAQFCMES*AFCIRVRQYLI Trigger: GATCAAGTACTGCCTGACTCTGATGCAAAACGCGCAGCTCTCCATGCAGAACTGTGCCTGTCTCTTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162759.6 |
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| CDS CAA 72 bp | GAGACAGGCACAGTTCTGCATGGAGAGCTGCGCGTTTaGCATCAGAGTCAGGCAGTACTTGATCCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: ETGTVLHGELRV*HQSQAVLDPAS Trigger: AGATGCTGGATCAAGTACTGCCTGACTCTGATGCAAAACGCGCAGCTCTCCATGCAGAACTGTGCCTGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162759.6 |
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| CDS GCA 72 bp | AGACAGGCACAGTTCTGCATGGAGAGCTGCGCGTTTTaGATCAGAGTCAGGCAGTACTTGATCCAGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: RQAQFCMESCAF*IRVRQYLIQHL Trigger: AAGATGCTGGATCAAGTACTGCCTGACTCTGATGCAAAACGCGCAGCTCTCCATGCAGAACTGTGCCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162759.6 |
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| CDS CAA 72 bp | AGCGGCCTTCTCGAACATTTCCATGTGCTGGTAGACTaGAGCCAGGTAATACAGGTTATGAGTATAAACCTT | + |
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Preference number: 6 (lower is better) Translates to: SGLLEHFHVLVD*SQVIQVMSINL Trigger: AAGGTTTATACTCATAACCTGTATTACCTGGCTCAAGTCTACCAGCACATGGAAATGTTCGAGAAGGCCGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 ENSMUST00000162759.6 |
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| CDS CAA 90 bp | GCAATAATGAGCGGCCTTCTCGAACATTTCCATGTGCTGGTAGACTaGAGCCAGGTAATACAGGTTATGAGTATAAACCTTCTCAAATCT | + |
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Preference number: 6 (lower is better) Translates to: AIMSGLLEHFHVLVD*SQVIQVMSINLLKS Trigger: AGATTTGAGAAGGTTTATACTCATAACCTGTATTACCTGGCTCAAGTCTACCAGCACATGGAAATGTTCGAGAAGGCCGCTCATTATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065887.14 ENSMUST00000159704.8 ENSMUST00000162525.8 ENSMUST00000162759.6 |
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