Pregenerated sensors for KIFAP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026585Ensembl transcript IDs: ENSMUST00000027877.7, ENSMUST00000077642.12
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGCGGAATCCATACGCGGTGGCAGGACGTCCAAGGATCCCCAGTaGCTGCCCGAAGCCATCCATCCCGAGGCTCGGCTGCTTGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: RAESIRGGRTSKDPQ*LPEAIHPEARLLEA Trigger: AGCCTCAAGCAGCCGAGCCTCGGGATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTCCTGCCACCGCGTATGGATTCCGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| 3UTR CCA 90 bp | CAAAGCTGTAGTAGTAAGGTTCGTCAGGGCGGAATCCATACGCGGTaGCAGGACGTCCAAGGATCCCCAGTGGCTGCCCGAAGCCATCCA | + |
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Preference number: 1 (lower is better) Translates to: QSCSSKVRQGGIHTR*QDVQGSPVAARSHP Trigger: TGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTCCTGCCACCGCGTATGGATTCCGCCCTGACGAACCTTACTACTACAGCTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTTGGCTAGATTTACATTTCTCCAGCAGATGGACTGTATTGTCCAAAGGAACCTCGAGATGTGGCTaGACGAGTGAACAGTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: TCWLDLHFSSRWTVLSKGTSRCG*TSEQWS Trigger: GCTCCACTGTTCACTCGTCCAGCCACATCTCGAGGT...TCCTTTGGACAATACAGTCCATCTGCTGGAGAAATGTAAATCTAGCCAACAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| 3UTR-3UTR TCA 90 bp | CATAAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTAGATCTCTCCTAAGCTaGGTGTCCACATGGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: HKQCLRSFMYQVRTYLLARSLLS*VSTWEG Trigger: CCCCTCCCATGTGGACACTCAGCTTAGGAGAGATCT...AGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| 3UTR-3UTR TCA 90 bp | TTAAGAGCAGAAGTCTTCCCTTTGATCTGCAGTGTTCGGAAGCTTAGGTTTCCTCATGAGTGTTTCCTATaGACCACAGTAAGTATGAAC | + |
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Preference number: 2 (lower is better) Translates to: LRAEVFPLICSVRKLRFPHECFL*TTVSMN Trigger: GTTCATACTTACTGTGGTTCATAGGAAACACTCATG...AGGAAACCTAAGCTTCCGAACACTGCAGATCAAAGGGAAGACTTCTGCTCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| 3UTR-3UTR TCA 90 bp | CATAAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTCAGAAGTCTTCCCTTTaGTCTGCAGTGTTCGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: HKQCLRSFMYQVRTYLLAQKSSL*SAVFGS Trigger: GCTTCCGAACACTGCAGATCAAAGGGAAGACTTCTG...AGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| 3UTR-3UTR CCA 90 bp | AAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTAGACTTCCAGACACAGCATaGGATAAAAAGCTTGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: KQCLRSFMYQVRTYLLARLPDTA*DKKLEV Trigger: AACCTCAAGCTTTTTATCCCATGCTGTGTCTGGAAG...TCTAGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| 3UTR-3UTR TCA 90 bp | CAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTAGATTTCATGAGTGTTTCCTATaGACCACAGTAAGTATGAAC | + |
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Preference number: 2 (lower is better) Translates to: QCLRSFMYQVRTYLLARFHECFL*TTVSMN Trigger: GTTCATACTTACTGTGGTTCATAGGAAACACTCATG...AAATCTAGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| 3UTR GCA 72 bp | TACGCGGTGGCAGGACGTCCAAGGATCCCCAGTGGCTaGCCGAAGCCATCCATCCCGAGGCTCGGCTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: YAVAGRPRIPSG*PKPSIPRLGCL Trigger: CAAGCAGCCGAGCCTCGGGATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTCCTGCCACCGCGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| 3UTR CCA 72 bp | TCCATACGCGGTGGCAGGACGTCCAAGGATCCCCAGTaGCTGCCCGAAGCCATCCATCCCGAGGCTCGGCTG | + |
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Preference number: 3 (lower is better) Translates to: SIRGGRTSKDPQ*LPEAIHPEARL Trigger: CAGCCGAGCCTCGGGATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTCCTGCCACCGCGTATGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| 3UTR CCA 72 bp | AGTAGTAAGGTTCGTCAGGGCGGAATCCATACGCGGTaGCAGGACGTCCAAGGATCCCCAGTGGCTGCCCGA | + |
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Preference number: 3 (lower is better) Translates to: SSKVRQGGIHTR*QDVQGSPVAAR Trigger: TCGGGCAGCCACTGGGGATCCTTGGACGTCCTGCCACCGCGTATGGATTCCGCCCTGACGAACCTTACTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| 3UTR CCA 72 bp | CATACCTGTTGGCTAGATTTACATTTCTCCAGCAGATaGACTGTATTGTCCAAAGGACCTCCCGAGCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: HTCWLDLHFSSR*TVLSKGPPELQ Trigger: CTGGAGCTCGGGAGGTCCTTTGGACAATACAGTCCATCTGCTGGAGAAATGTAAATCTAGCCAACAGGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| 3UTR-3UTR CAA 90 bp | TTAAGAGCAGAAGTCTTCCCTTTGATCTGCAGTGTTCGGAAGCTTAGGTTTCCTTCCTCACATTTGATATaGCACATTTTGGAAGACCCG | + |
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Preference number: 3 (lower is better) Translates to: LRAEVFPLICSVRKLRFPSSHLI*HILEDP Trigger: CGGGTCTTCCAAAATGTGCAATATCAAATGTGAGGA...AGGAAACCTAAGCTTCCGAACACTGCAGATCAAAGGGAAGACTTCTGCTCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| 3UTR-3UTR CAA 90 bp | AATTTCCCACTACCCACTTCTATCTTAAGTGAACAAACAGAGAGTCCTTTCCTTTCCAGTCTAGCAGTTTaGCAACAGACTCACGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: NFPLPTSILSEQTESPFLSSLAV*QQTHGK Trigger: TTTCCCGTGAGTCTGTTGCAAAACTGCTAGACTGGA...AAGGAAAGGACTCTCTGTTTGTTCACTTAAGATAGAAGTGGGTAGTGGGAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| 3UTR-3UTR CAA 90 bp | CAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTAGATTTTCCAGTCTAGCAGTTTaGCAACAGACTCACGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: QCLRSFMYQVRTYLLARFSSLAV*QQTHGK Trigger: TTTCCCGTGAGTCTGTTGCAAAACTGCTAGACTGGA...AAATCTAGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| 3UTR-3UTR CAA 90 bp | AATTTCCCACTACCCACTTCTATCTTAAGTGAACAAACAGAGAGTCCTTTCCTTTCCTCACATTTGATATaGCACATTTTGGAAGACCCG | + |
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Preference number: 3 (lower is better) Translates to: NFPLPTSILSEQTESPFLSSHLI*HILEDP Trigger: CGGGTCTTCCAAAATGTGCAATATCAAATGTGAGGA...AAGGAAAGGACTCTCTGTTTGTTCACTTAAGATAGAAGTGGGTAGTGGGAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| 3UTR-3UTR CAA 90 bp | AAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTAGATCAGCATCCTCACATTaGATATTGCACATTTTGGAA | + |
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Preference number: 3 (lower is better) Translates to: KQCLRSFMYQVRTYLLARSASSH*ILHILE Trigger: TTCCAAAATGTGCAATATCAAATGTGAGGATGCTGA...TCTAGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR GCA 90 bp | GGTGGCAGGACGTCCAAGGATCCCCAGTGGCTGCCCGAAGCCATCCATCCCGAGTTCATTGCCCAGGAGTaGAGTGAGCTTTGGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: GGRTSKDPQWLPEAIHPEFIAQE*SELWEK Trigger: CTTCTCCCAAAGCTCACTGCACTCCTGGGCAATGAA...CTCGGGATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTCCTGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| CDS-3UTR CCA 90 bp | GTGGCAGGACGTCCAAGGATCCCCAGTGGCTGCCCGAAGCCATCCATCCCGAGGGGATTATCCCAGATTTaGCCAGTAGGGCAGCACAAG | + |
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Preference number: 4 (lower is better) Translates to: VAGRPRIPSGCPKPSIPRGLSQI*PVGQHK Trigger: CTTGTGCTGCCCTACTGGCCAAATCTGGGATAATCC...CCTCGGGATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTCCTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| CDS-3UTR CCA 90 bp | GTGGCAGGACGTCCAAGGATCCCCAGTGGCTGCCCGAAGCCATCCATCCCGAGGTTCGTTCTCCCAACATaGGATCTCCCATTTCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: VAGRPRIPSGCPKPSIPRFVLPT*DLPFLQ Trigger: TTGGAGAAATGGGAGATCCCATGTTGGGAGAACGAA...CCTCGGGATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTCCTGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| CDS-3UTR TCA 90 bp | GACGTCCAAGGATCCCCAGTGGCTGCCCGAAGCCATCCATCCCGAGGCTCGGCTTCAGAGCTCTTTTCATaGGCATTTTCAGCCCATTTC | + |
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Preference number: 4 (lower is better) Translates to: DVQGSPVAARSHPSRGSASELFS*AFSAHF Trigger: GAAATGGGCTGAAAATGCTCATGAAAAGAGCTCTGA...AGCCGAGCCTCGGGATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| CDS-3UTR GCA 90 bp | CAAAGCTGTAGTAGTAAGGTTCGTCAGGGCGGAATCCATACGCGGTGGCAGGACAGTGCTGCCAGGAAATaGGTGTTGCCCCACCACATC | + |
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Preference number: 4 (lower is better) Translates to: QSCSSKVRQGGIHTRWQDSAARK*VLPHHI Trigger: GATGTGGTGGGGCAACACGCATTTCCTGGCAGCACT...GTCCTGCCACCGCGTATGGATTCCGCCCTGACGAACCTTACTACTACAGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| CDS-3UTR TCA 90 bp | GGAGGGGTGATTTTATCGAGACCCAAAGCTGTAGTAGTAAGGTTCGTCAGGGCGTGCCCAGGAGTGCAGTaGGCTTTGGGAGAAGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: GGVILSRPKAVVVRFVRACPGVQ*ALGEAQ Trigger: TTGGGCTTCTCCCAAAGCTCACTGCACTCCTGGGCA...CGCCCTGACGAACCTTACTACTACAGCTTTGGGTCTCGATAAAATCACCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| CDS-3UTR GCA 90 bp | GTGGCAGGACGTCCAAGGATCCCCAGTGGCTGCCCGAAGCCATCCATCCCGAGGTTAGAGAGTTCTTCTTaGCAAAGCTCGTGTCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: VAGRPRIPSGCPKPSIPRLESSS*QSSCLF Trigger: AAAAAGACACGAGCTTTGGCAAGAAGAACTCTCTAA...CCTCGGGATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTCCTGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| CDS-3UTR CCA 90 bp | CAAAGCTGTAGTAGTAAGGTTCGTCAGGGCGGAATCCATACGCGGTGGCAGGACCAGCTCGATGAGGGCTaGGATTATCCCAGATTTGGC | + |
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Preference number: 4 (lower is better) Translates to: QSCSSKVRQGGIHTRWQDQLDEG*DYPRFG Trigger: GCCAAATCTGGGATAATCCCAGCCCTCATCGAGCTG...GTCCTGCCACCGCGTATGGATTCCGCCCTGACGAACCTTACTACTACAGCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| CDS-3UTR TCA 90 bp | CATGGGAGGGGTGATTTTATCGAGACCCAAAGCTGTAGTAGTAAGGTTCGTCAGACCATCTCCAGCCACTaGGAGTTATGCCAGCGAAAC | + |
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Preference number: 4 (lower is better) Translates to: HGRGDFIETQSCSSKVRQTISSH*ELCQRN Trigger: GTTTCGCTGGCATAACTCTCAGTGGCTGGAGATGGT...CTGACGAACCTTACTACTACAGCTTTGGGTCTCGATAAAATCACCCCTCCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| CDS-3UTR GCA 90 bp | CAAAGCTGTAGTAGTAAGGTTCGTCAGGGCGGAATCCATACGCGGTGGCAGGACCAGGTCAATGAGATATaGTGGAGCTTGTGTTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: QSCSSKVRQGGIHTRWQDQVNEI*WSLCFL Trigger: AAGGAAACACAAGCTCCAGCATATCTCATTGACCTG...GTCCTGCCACCGCGTATGGATTCCGCCCTGACGAACCTTACTACTACAGCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| CDS-3UTR CCA 90 bp | CAAAGCTGTAGTAGTAAGGTTCGTCAGGGCGGAATCCATACGCGGTGGCAGGACCTTAGCTTTGAGGGATaGATGAGCTTACATTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: QSCSSKVRQGGIHTRWQDLSFEG*MSLHSS Trigger: TGAGGAATGTAAGCTCATCCATCCCTCAAAGCTAAG...GTCCTGCCACCGCGTATGGATTCCGCCCTGACGAACCTTACTACTACAGCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| CDS-3UTR TCA 90 bp | CATGGGAGGGGTGATTTTATCGAGACCCAAAGCTGTAGTAGTAAGGTTCGTCAGAGAGGAGCCGGAGGGTaGTATTCAGGAGATCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: HGRGDFIETQSCSSKVRQRGAGG*YSGDLH Trigger: ATGAAGATCTCCTGAATATCACCCTCCGGCTCCTCT...CTGACGAACCTTACTACTACAGCTTTGGGTCTCGATAAAATCACCCCTCCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| CDS-3UTR TCA 90 bp | TTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATCTCTCCTAAGCTGAGTTGCCCAGGAGTGCAGTaGGCTTTGGGAGAAGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: LSQDSRLTHSTQISPKLSCPGVQ*ALGEAQ Trigger: TTGGGCTTCTCCCAAAGCTCACTGCACTCCTGGGCA...ACTCAGCTTAGGAGAGATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR CCA 90 bp | CAAAGCTGTAGTAGTAAGGTTCGTCAGGGCGGAATCCATACGCGGTGGCAGGACGTCAATGAGATATGCTaGAGCTTGTGTTTCCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: QSCSSKVRQGGIHTRWQDVNEIC*SLCFLD Trigger: ATCAAGGAAACACAAGCTCCAGCATATCTCATTGAC...GTCCTGCCACCGCGTATGGATTCCGCCCTGACGAACCTTACTACTACAGCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| CDS-3UTR CCA 90 bp | ACCTGTTGGCTAGATTTACATTTCTCCAGCAGATGGACTGTATTGTCCAAAGGATCCAAGGATCCCCAGTaGCTGCCCGAAGCCATCCAT | + |
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Preference number: 4 (lower is better) Translates to: TCWLDLHFSSRWTVLSKGSKDPQ*LPEAIH Trigger: ATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGA...TCCTTTGGACAATACAGTCCATCTGCTGGAGAAATGTAAATCTAGCCAACAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027877.7 |
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| CDS-3UTR CCA 90 bp | TGTTATTCACCTCGAGATGTGGCTGGACGAGTGAACAGTGGAGCATCAACCGTATTCGTTCTCCCAACATaGGATCTCCCATTTCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: CYSPRDVAGRVNSGASTVFVLPT*DLPFLQ Trigger: TTGGAGAAATGGGAGATCCCATGTTGGGAGAACGAA...TACGGTTGATGCTCCACTGTTCACTCGTCCAGCCACATCTCGAGGTGAATAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR CCA 90 bp | TTAAGAGCAGAAGTCTTCCCTTTGATCTGCAGTGTTCGGAAGCTTAGGTTTCCTCAGCTCGATGAGGGCTaGGATTATCCCAGATTTGGC | + |
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Preference number: 4 (lower is better) Translates to: LRAEVFPLICSVRKLRFPQLDEG*DYPRFG Trigger: GCCAAATCTGGGATAATCCCAGCCCTCATCGAGCTG...AGGAAACCTAAGCTTCCGAACACTGCAGATCAAAGGGAAGACTTCTGCTCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR TCA 90 bp | CATGGGAGGGGTGATTTTATCGAGACCCAAAGCTGTAGTAGTAAGGTTCGTCAGCGAAACTTCTCACTCTaGATTTTCTTGGCCCACTCT | + |
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Preference number: 4 (lower is better) Translates to: HGRGDFIETQSCSSKVRQRNFSL*IFLAHS Trigger: AGAGTGGGCCAAGAAAATTCAGAGTGAGAAGTTTCG...CTGACGAACCTTACTACTACAGCTTTGGGTCTCGATAAAATCACCCCTCCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
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| CDS-3UTR CCA 90 bp | TTAAGAGCAGAAGTCTTCCCTTTGATCTGCAGTGTTCGGAAGCTTAGGTTTCCTTCATCACTGGAAATCTaGGCTGCAAGGTCCCCAACA | + |
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Preference number: 4 (lower is better) Translates to: LRAEVFPLICSVRKLRFPSSLEI*AARSPT Trigger: TGTTGGGGACCTTGCAGCCCAGATTTCCAGTGATGA...AGGAAACCTAAGCTTCCGAACACTGCAGATCAAAGGGAAGACTTCTGCTCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR TCA 90 bp | GTTAACCTGAAGCTAACAACGTGGAGAAATAAGCAACACAGCCCCATAGGAGTAGCTGGGAGATGTTTCTaGTCATCTTCATCAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: VNLKLTTWRNKQHSPIGVAGRCF*SSSSAV Trigger: CACTGCTGATGAAGATGATCAGAAACATCTCCCAGC...TACTCCTATGGGGCTGTGTTGCTTATTTCTCCACGTTGTTAGCTTCAGGTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR TCA 90 bp | GTTAACCTGAAGCTAACAACGTGGAGAAATAAGCAACACAGCCCCATAGGAGTACATGCATCAGGTCAATaGGATATGCTGGAGCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: VNLKLTTWRNKQHSPIGVHASGQ*DMLELV Trigger: CACAAGCTCCAGCATATCTCATTGACCTGATGCATG...TACTCCTATGGGGCTGTGTTGCTTATTTCTCCACGTTGTTAGCTTCAGGTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR TCA 90 bp | AGTATAACATGCATTATTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATTCGCTCTCATCCAGCTaGCGGCTCTCCACCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: SITCIIKSRFKVNPQHTDSLSSS*RLSTIS Trigger: GGAGATGGTGGAGAGCCGTCAGCTGGATGAGAGCGA...ATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAATAATGCATGTTATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR GCA 90 bp | ACCTGTTGGCTAGATTTACATTTCTCCAGCAGATGGACTGTATTGTCCAAAGGATTCATTGCCCAGGAGTaGAGTGAGCTTTGGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: TCWLDLHFSSRWTVLSKGFIAQE*SELWEK Trigger: CTTCTCCCAAAGCTCACTGCACTCCTGGGCAATGAA...TCCTTTGGACAATACAGTCCATCTGCTGGAGAAATGTAAATCTAGCCAACAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR GCA 90 bp | GTTAACCTGAAGCTAACAACGTGGAGAAATAAGCAACACAGCCCCATAGGAGTAACTGGAAATCTGGGCTaGAAGGTCCCCAACATAATC | + |
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Preference number: 4 (lower is better) Translates to: VNLKLTTWRNKQHSPIGVTGNLG*KVPNII Trigger: GATTATGTTGGGGACCTTGCAGCCCAGATTTCCAGT...TACTCCTATGGGGCTGTGTTGCTTATTTCTCCACGTTGTTAGCTTCAGGTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR GCA 90 bp | CAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTAGATTTGAGGCTGCCAGGAAATaGGTGTTGCCCCACCACATC | + |
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Preference number: 4 (lower is better) Translates to: QCLRSFMYQVRTYLLARFEAARK*VLPHHI Trigger: GATGTGGTGGGGCAACACGCATTTCCTGGCAGCCTC...AAATCTAGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027877.7 |
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| CDS-3UTR CCA 90 bp | TTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATCTCTCCTAAGCTGAGTCCTCCTCTTCATCACTaGAAATCTGGGCTGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: LSQDSRLTHSTQISPKLSPPLHH*KSGLQG Trigger: ACCTTGCAGCCCAGATTTCCAGTGATGAAGAGGAGG...ACTCAGCTTAGGAGAGATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR TCA 90 bp | TGTTATTCACCTCGAGATGTGGCTGGACGAGTGAACAGTGGAGCATCAACCGTACTTCATACTGAACAATaGGAGCTTTTTCTGATGGAT | + |
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Preference number: 4 (lower is better) Translates to: CYSPRDVAGRVNSGASTVLHTEQ*ELFLMD Trigger: ATCCATCAGAAAAAGCTCTCATTGTTCAGTATGAAG...TACGGTTGATGCTCCACTGTTCACTCGTCCAGCCACATCTCGAGGTGAATAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR GCA 90 bp | GTTAACCTGAAGCTAACAACGTGGAGAAATAAGCAACACAGCCCCATAGGAGTAGGATGTACGGCTCAATaGGATCATCACCATACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VNLKLTTWRNKQHSPIGVGCTAQ*DHHHTS Trigger: ACTTGTATGGTGATGATCGCATTGAGCCGTACATCC...TACTCCTATGGGGCTGTGTTGCTTATTTCTCCACGTTGTTAGCTTCAGGTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR CCA 90 bp | CATGGGAGGGGTGATTTTATCGAGACCCAAAGCTGTAGTAGTAAGGTTCGTCAGCACTCTGAATTTTCTTaGCCCACTCTTCATCATACT | + |
|
Preference number: 4 (lower is better) Translates to: HGRGDFIETQSCSSKVRQHSEFS*PTLHHT Trigger: AGTATGATGAAGAGTGGGCCAAGAAAATTCAGAGTG...CTGACGAACCTTACTACTACAGCTTTGGGTCTCGATAAAATCACCCCTCCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
||
| CDS-3UTR TCA 90 bp | ACCTGTTGGCTAGATTTACATTTCTCCAGCAGATGGACTGTATTGTCCAAAGGAGCCTTCACCAACATGTaGACGATATTCTTGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TCWLDLHFSSRWTVLSKGAFTNM*TIFLFL Trigger: GAGGAACAAGAATATCGTTCACATGTTGGTGAAGGC...TCCTTTGGACAATACAGTCCATCTGCTGGAGAAATGTAAATCTAGCCAACAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR TCA 90 bp | AATTTCCCACTACCCACTTCTATCTTAAGTGAACAAACAGAGAGTCCTTTCCTTAGAGGAGCCGGAGGGTaGTATTCAGGAGATCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NFPLPTSILSEQTESPFLRGAGG*YSGDLH Trigger: ATGAAGATCTCCTGAATATCACCCTCCGGCTCCTCT...AAGGAAAGGACTCTCTGTTTGTTCACTTAAGATAGAAGTGGGTAGTGGGAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR TCA 90 bp | CATAAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTACCATCTCCAGCCACTaGGAGTTATGCCAGCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HKQCLRSFMYQVRTYLLATISSH*ELCQRN Trigger: GTTTCGCTGGCATAACTCTCAGTGGCTGGAGATGGT...AGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR GCA 90 bp | GTTAACCTGAAGCTAACAACGTGGAGAAATAAGCAACACAGCCCCATAGGAGTACAGGTCAATGAGATATaGTGGAGCTTGTGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VNLKLTTWRNKQHSPIGVQVNEI*WSLCFL Trigger: AAGGAAACACAAGCTCCAGCATATCTCATTGACCTG...TACTCCTATGGGGCTGTGTTGCTTATTTCTCCACGTTGTTAGCTTCAGGTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CCA 90 bp | AATTTCCCACTACCCACTTCTATCTTAAGTGAACAAACAGAGAGTCCTTTCCTTGAGTGCAGTGAGCTTTaGGAGAAGCCCAACTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NFPLPTSILSEQTESPFLECSEL*EKPNLY Trigger: GTACAAGTTGGGCTTCTCCCAAAGCTCACTGCACTC...AAGGAAAGGACTCTCTGTTTGTTCACTTAAGATAGAAGTGGGTAGTGGGAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR TCA 90 bp | GTTAACCTGAAGCTAACAACGTGGAGAAATAAGCAACACAGCCCCATAGGAGTAGCTTCCACTTCATACTaGACAATGAGAGCTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VNLKLTTWRNKQHSPIGVASTSY*TMRAFS Trigger: AGAAAAAGCTCTCATTGTTCAGTATGAAGTGGAAGC...TACTCCTATGGGGCTGTGTTGCTTATTTCTCCACGTTGTTAGCTTCAGGTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR TCA 90 bp | TTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATCTCTCCTAAGCTGAGTCATTTCCTTCACAGATaGGCTGGACATTTCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSQDSRLTHSTQISPKLSHFLHR*AGHFSC Trigger: ACAAGAGAAATGTCCAGCTCATCTGTGAAGGAAATG...ACTCAGCTTAGGAGAGATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR TCA 90 bp | ACCTGTTGGCTAGATTTACATTTCTCCAGCAGATGGACTGTATTGTCCAAAGGAGGAGGTGAAAATCATTaGAGAAGTCTGGACTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: TCWLDLHFSSRWTVLSKGGGENH*RSLDLW Trigger: CCATAAGTCCAGACTTCTTCAATGATTTTCACCTCC...TCCTTTGGACAATACAGTCCATCTGCTGGAGAAATGTAAATCTAGCCAACAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR TCA 90 bp | TTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATCTCTCCTAAGCTGAGTGGAGGTGAAAATCATTaGAGAAGTCTGGACTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQDSRLTHSTQISPKLSGGENH*RSLDLW Trigger: CCATAAGTCCAGACTTCTTCAATGATTTTCACCTCC...ACTCAGCTTAGGAGAGATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CCA 90 bp | TTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATCTCTCCTAAGCTGAGTCTTAGCTTTGAGGGATaGATGAGCTTACATTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSQDSRLTHSTQISPKLSLSFEG*MSLHSS Trigger: TGAGGAATGTAAGCTCATCCATCCCTCAAAGCTAAG...ACTCAGCTTAGGAGAGATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CCA 90 bp | CAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTAGATTTCCTCCTCTTCATCACTaGAAATCTGGGCTGCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QCLRSFMYQVRTYLLARFPPLHH*KSGLQG Trigger: ACCTTGCAGCCCAGATTTCCAGTGATGAAGAGGAGG...AAATCTAGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CCA 90 bp | ATAACATGCATTATTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATCTCGGATTATCCCAGATTTaGCCAGTAGGGCAGCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ITCIIKSRFKVNPQHTDLGLSQI*PVGQHK Trigger: CTTGTGCTGCCCTACTGGCCAAATCTGGGATAATCC...GAGATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAATAATGCATGTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR TCA 90 bp | TTAAGAGCAGAAGTCTTCCCTTTGATCTGCAGTGTTCGGAAGCTTAGGTTTCCTAGTATATGCAAACATTaGCTTAAAGCGGTCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRAEVFPLICSVRKLRFPSICKH*LKAVIH Trigger: ATGGATGACCGCTTTAAGTCAATGTTTGCATATACT...AGGAAACCTAAGCTTCCGAACACTGCAGATCAAAGGGAAGACTTCTGCTCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR TCA 90 bp | ATAACATGCATTATTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATCTCGCTGGGAGATGTTTCTaGTCATCTTCATCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ITCIIKSRFKVNPQHTDLAGRCF*SSSSAV Trigger: CACTGCTGATGAAGATGATCAGAAACATCTCCCAGC...GAGATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAATAATGCATGTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR TCA 90 bp | ATAACATGCATTATTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATCTCCATGCATCAGGTCAATaGGATATGCTGGAGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ITCIIKSRFKVNPQHTDLHASGQ*DMLELV Trigger: CACAAGCTCCAGCATATCTCATTGACCTGATGCATG...GAGATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAATAATGCATGTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR GCA 90 bp | ATAACATGCATTATTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATCTCACTGGAAATCTGGGCTaGAAGGTCCCCAACATAATC | + |
|
Preference number: 4 (lower is better) Translates to: ITCIIKSRFKVNPQHTDLTGNLG*KVPNII Trigger: GATTATGTTGGGGACCTTGCAGCCCAGATTTCCAGT...GAGATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAATAATGCATGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR TCA 90 bp | CATAAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTCGAAACTTCTCACTCTaGATTTTCTTGGCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: HKQCLRSFMYQVRTYLLARNFSL*IFLAHS Trigger: AGAGTGGGCCAAGAAAATTCAGAGTGAGAAGTTTCG...AGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR GCA 90 bp | CATAAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTGGATGTACGGCTCAATaGGATCATCACCATACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HKQCLRSFMYQVRTYLLAGCTAQ*DHHHTS Trigger: ACTTGTATGGTGATGATCGCATTGAGCCGTACATCC...AGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CCA 90 bp | AATTTCCCACTACCCACTTCTATCTTAAGTGAACAAACAGAGAGTCCTTTCCTTTTTGAAATCCTTGGATaGACAGTGCTGCCAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NFPLPTSILSEQTESPFLFEILG*TVLPGN Trigger: ATTTCCTGGCAGCACTGTCCATCCAAGGATTTCAAA...AAGGAAAGGACTCTCTGTTTGTTCACTTAAGATAGAAGTGGGTAGTGGGAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
||
| CDS-3UTR TCA 90 bp | CAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTAGATTTCATTTCCTTCACAGATaGGCTGGACATTTCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QCLRSFMYQVRTYLLARFHFLHR*AGHFSC Trigger: ACAAGAGAAATGTCCAGCTCATCTGTGAAGGAAATG...AAATCTAGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR TCA 90 bp | CATAAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTTCAGAGCTCTTTTCATaGGCATTTTCAGCCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: HKQCLRSFMYQVRTYLLASELFS*AFSAHF Trigger: GAAATGGGCTGAAAATGCTCATGAAAAGAGCTCTGA...AGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR TCA 90 bp | CATAAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTGCTTCCACTTCATACTaGACAATGAGAGCTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HKQCLRSFMYQVRTYLLAASTSY*TMRAFS Trigger: AGAAAAAGCTCTCATTGTTCAGTATGAAGTGGAAGC...AGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTTATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CCA 90 bp | AAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTAGACACTCTGAATTTTCTTaGCCCACTCTTCATCATACT | + |
|
Preference number: 4 (lower is better) Translates to: KQCLRSFMYQVRTYLLARHSEFS*PTLHHT Trigger: AGTATGATGAAGAGTGGGCCAAGAAAATTCAGAGTG...TCTAGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR TCA 90 bp | ATAACATGCATTATTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATCTCAGTATATGCAAACATTaGCTTAAAGCGGTCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ITCIIKSRFKVNPQHTDLSICKH*LKAVIH Trigger: ATGGATGACCGCTTTAAGTCAATGTTTGCATATACT...GAGATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAATAATGCATGTTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CCA 90 bp | AGTATAACATGCATTATTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATGTCAATGAGATATGCTaGAGCTTGTGTTTCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SITCIIKSRFKVNPQHTDVNEIC*SLCFLD Trigger: ATCAAGGAAACACAAGCTCCAGCATATCTCATTGAC...ATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAATAATGCATGTTATACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS-3UTR TCA 90 bp | AGTATAACATGCATTATTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATCTTCATACTGAACAATaGGAGCTTTTTCTGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SITCIIKSRFKVNPQHTDLHTEQ*ELFLMD Trigger: ATCCATCAGAAAAAGCTCTCATTGTTCAGTATGAAG...ATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAATAATGCATGTTATACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR GCA 90 bp | CATAAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTGATATTCATACACAGTaGTCCAATTTTGTAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HKQCLRSFMYQVRTYLLADIHTQ*SNFVVS Trigger: ACTCACTACAAAATTGGAGCACTGTGTATGAATATC...AGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR GCA 90 bp | AAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTAGAGATATTCATACACAGTaGTCCAATTTTGTAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KQCLRSFMYQVRTYLLARDIHTQ*SNFVVS Trigger: ACTCACTACAAAATTGGAGCACTGTGTATGAATATC...TCTAGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR GCA 90 bp | AGTATAACATGCATTATTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATTTAGAGAGTTCTTCTTaGCAAAGCTCGTGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SITCIIKSRFKVNPQHTDLESSS*QSSCLF Trigger: AAAAAGACACGAGCTTTGGCAAGAAGAACTCTCTAA...ATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAATAATGCATGTTATACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR GCA 90 bp | AGTATAACATGCATTATTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATTTCAGGAGATCTTCATaGTCACAGGGTATCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SITCIIKSRFKVNPQHTDFRRSS*SQGIIF Trigger: AAAAATGATACCCTGTGAGCATGAAGATCTCCTGAA...ATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAATAATGCATGTTATACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS CCA 90 bp | AGGGCGGAATCCATACGCGGTGGCAGGACGTCCAAGGATCCCCAGTaGCTGCCCGAAGCCATCCATCCCGAGGCTGCCAGGAAATGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RAESIRGGRTSKDPQ*LPEAIHPEAARKCV Trigger: CACGCATTTCCTGGCAGCCTCGGGATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTCCTGCCACCGCGTATGGATTCCGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027877.7 |
||
| CDS GCA 90 bp | CGGAATCCATACGCGGTGGCAGGACGTCCAAGGATCCCCAGTGGCTaGCCGAAGCCATCCATCCCGAGGCTGCCAGGAAATGCGTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RNPYAVAGRPRIPSG*PKPSIPRLPGNACC Trigger: GCAACACGCATTTCCTGGCAGCCTCGGGATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTCCTGCCACCGCGTATGGATTCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027877.7 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGGACGTCCAAGGATCCCCAGTGGCTGCCCGAAGCCATCCATCCCGAGGGCCAGGAAATGCGTGTaGCCCCACCACATCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: VAGRPRIPSGCPKPSIPRARKCV*PHHISI Trigger: AATGGAGATGTGGTGGGGCAACACGCATTTCCTGGC...CCTCGGGATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTCCTGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGGACGTCCAAGGATCCCCAGTGGCTGCCCGAAGCCATCCATCCCGAGGAGCACTTTGAAATCCTaGGATGGACAGTGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VAGRPRIPSGCPKPSIPRSTLKS*DGQCCQ Trigger: CTGGCAGCACTGTCCATCCAAGGATTTCAAAGTGCT...CCTCGGGATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTCCTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | GGTGGCAGGACGTCCAAGGATCCCCAGTGGCTGCCCGAAGCCATCCATCCCGAGGAGATATGCTGGAGCTaGTGTTTCCTTGATTATGAC | + |
|
Preference number: 5 (lower is better) Translates to: GGRTSKDPQWLPEAIHPEEICWS*CFLDYD Trigger: GTCATAATCAAGGAAACACAAGCTCCAGCATATCTC...CTCGGGATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTCCTGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | GACGTCCAAGGATCCCCAGTGGCTGCCCGAAGCCATCCATCCCGAGGCTCGGCTAGCTGGACATTTCTCTaGTTAGCAGCAAGATTAATG | + |
|
Preference number: 5 (lower is better) Translates to: DVQGSPVAARSHPSRGSASWTFL*LAARLM Trigger: CATTAATCTTGCTGCTAACAAGAGAAATGTCCAGCT...AGCCGAGCCTCGGGATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
||
| CDS GCA 90 bp | GGTCAGGCCTTTCAAGAATGTCCCCTTCATGGATGTACGGCTCAATaGGATCATCACCATACAAGTACTGCTCGCTCTCATCCAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GQAFQECPLHGCTAQ*DHHHTSTARSHPAD Trigger: GTCAGCTGGATGAGAGCGAGCAGTACTTGTATGGTGATGATCGCATTGAGCCGTACATCCATGAAGGGGACATTCTTGAAAGGCCTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | GGAGGGGTGATTTTATCGAGACCCAAAGCTGTAGTAGTAAGGTTCGTCAGGGCGATCAGCAGTGGGTCCTaGAGCTTCAGAGCTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGVILSRPKAVVVRFVRAISSGS*SFRALF Trigger: GAAAAGAGCTCTGAAGCTCAAGGACCCACTGCTGAT...CGCCCTGACGAACCTTACTACTACAGCTTTGGGTCTCGATAAAATCACCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
||
| CDS CCA 90 bp | GGGCCCATCATGCTGGGAGATGTTTCTGATCATCTTCATCAGCAGTaGGTCCTTGAGCTTCAGAGCTCTTTTCATGAGCATTTTCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GPIMLGDVSDHLHQQ*VLELQSSFHEHFQP Trigger: GGGCTGAAAATGCTCATGAAAAGAGCTCTGAAGCTCAAGGACCCACTGCTGATGAAGATGATCAGAAACATCTCCCAGCATGATGGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | TTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATCTCTCCTAAGCTGAGTCTTCTCTCAGGACTCTaGCTAGCGCACCCAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSQDSRLTHSTQISPKLSLLSGL*LAHPGQ Trigger: CTGCCCTGGGTGCGCTAGCAAGAGTCCTGAGAGAAG...ACTCAGCTTAGGAGAGATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | GGAGGGGTGATTTTATCGAGACCCAAAGCTGTAGTAGTAAGGTTCGTCAGGGCGATCAGCAGCTCAAAATaGTCCCGATCAAGAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGVILSRPKAVVVRFVRAISSSK*SRSRAF Trigger: GAAGGCTCTTGATCGGGACAATTTTGAGCTGCTGAT...CGCCCTGACGAACCTTACTACTACAGCTTTGGGTCTCGATAAAATCACCCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
||
| CDS TCA 90 bp | CTGCCAGGAAATGCGTGTTGCCCCACCACATCTCCATTCTGGAGGTaGAAATCATTGAAGAAGTCTGGACTTATGGCTCCTTCAGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LPGNACCPTTSPFWR*KSLKKSGLMAPSEV Trigger: TACCTCTGAAGGAGCCATAAGTCCAGACTTCTTCAATGATTTTCACCTCCAGAATGGAGATGTGGTGGGGCAACACGCATTTCCTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | TGTTATTCACCTCGAGATGTGGCTGGACGAGTGAACAGTGGAGCATCAACCGTACCTTTAACTTTCCTTTaGAGGTATCTGGCGTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CYSPRDVAGRVNSGASTVPLTFL*RYLASS Trigger: CGAGGACGCCAGATACCTCAAAAGGAAAGTTAAAGG...TACGGTTGATGCTCCACTGTTCACTCGTCCAGCCACATCTCGAGGTGAATAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS TCA 90 bp | TCCTCAGGCCTGTGTCAAACGAGAGGTTTAAGAGGAGCCGGAGGGTaGTATTCAGGAGATCTTCATGCTCACAGGGTATCATTTTTACCA | + |
|
Preference number: 5 (lower is better) Translates to: SSGLCQTRGLRGAGG*YSGDLHAHRVSFLP Trigger: TGGTAAAAATGATACCCTGTGAGCATGAAGATCTCCTGAATATCACCCTCCGGCTCCTCTTAAACCTCTCGTTTGACACAGGCCTGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | TGTTATTCACCTCGAGATGTGGCTGGACGAGTGAACAGTGGAGCATCAACCGTAGGCTTTAGTTTGTCTTaGAGGAATGGAACCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CYSPRDVAGRVNSGASTVGFSLS*RNGTSL Trigger: CAAGCTGGTTCCATTCCTCAAAGACAAACTAAAGCC...TACGGTTGATGCTCCACTGTTCACTCGTCCAGCCACATCTCGAGGTGAATAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | TGTTATTCACCTCGAGATGTGGCTGGACGAGTGAACAGTGGAGCATCAACCGTAGGAGCTTGTGTTTCCTaGATTATGACATCTCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CYSPRDVAGRVNSGASTVGACVS*IMTSLV Trigger: CACAAGAGATGTCATAATCAAGGAAACACAAGCTCC...TACGGTTGATGCTCCACTGTTCACTCGTCCAGCCACATCTCGAGGTGAATAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | AGTATAACATGCATTATTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATCTTCTCTCAGGACTCTaGCTAGCGCACCCAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SITCIIKSRFKVNPQHTDLLSGL*LAHPGQ Trigger: CTGCCCTGGGTGCGCTAGCAAGAGTCCTGAGAGAAG...ATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAATAATGCATGTTATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS TCA 90 bp | ATCAGCAGCTCAAAATTGTCCCGATCAAGAGCCTTCACCAACATGTaGACGATATTCTTGTTCCTCATCTTCAGTTCTGTACGTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISSSKLSRSRAFTNM*TIFLFLIFSSVRVS Trigger: GGACACACGTACAGAACTGAAGATGAGGAACAAGAATATCGTTCACATGTTGGTGAAGGCTCTTGATCGGGACAATTTTGAGCTGCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | TTAAGAGCAGAAGTCTTCCCTTTGATCTGCAGTGTTCGGAAGCTTAGGTTTCCTGGCTTTAGTTTGTCTTaGAGGAATGGAACCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRAEVFPLICSVRKLRFPGFSLS*RNGTSL Trigger: CAAGCTGGTTCCATTCCTCAAAGACAAACTAAAGCC...AGGAAACCTAAGCTTCCGAACACTGCAGATCAAAGGGAAGACTTCTGCTCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | TTAAGAGCAGAAGTCTTCCCTTTGATCTGCAGTGTTCGGAAGCTTAGGTTTCCTGAGATATGCTGGAGCTaGTGTTTCCTTGATTATGAC | + |
|
Preference number: 5 (lower is better) Translates to: LRAEVFPLICSVRKLRFPEICWS*CFLDYD Trigger: GTCATAATCAAGGAAACACAAGCTCCAGCATATCTC...AGGAAACCTAAGCTTCCGAACACTGCAGATCAAAGGGAAGACTTCTGCTCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | GGTAAAAGGGAAACAAAGACAATAACTGCATGCTTTCAGATTGTGAATTCACAAGCCAGGAAATGCGTGTaGCCCCACCACATCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: GKRETKTITACFQIVNSQARKCV*PHHISI Trigger: AATGGAGATGTGGTGGGGCAACACGCATTTCCTGGC...TTGTGAATTCACAATCTGAAAGCATGCAGTTATTGTCTTTGTTTCCCTTTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS GCA 90 bp | GAGAGGTTTAAGAGGAGCCGGAGGGTGATATTCAGGAGATCTTCATaGTCACAGGGTATCATTTTTACCAGTTTTTCAACAATATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: ERFKRSRRVIFRRSS*SQGIIFTSFSTISI Trigger: GATGGATATTGTTGAAAAACTGGTAAAAATGATACCCTGTGAGCATGAAGATCTCCTGAATATCACCCTCCGGCTCCTCTTAAACCTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | TTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATCTCTCCTAAGCTGAGTCTTAGAGAGTTCTTCTaGCCAAAGCTCGTGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSQDSRLTHSTQISPKLSLREFF*PKLVSF Trigger: AAAAGACACGAGCTTTGGCAAGAAGAACTCTCTAAG...ACTCAGCTTAGGAGAGATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | CATAAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTCCTTTAACTTTCCTTTaGAGGTATCTGGCGTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HKQCLRSFMYQVRTYLLAPLTFL*RYLASS Trigger: CGAGGACGCCAGATACCTCAAAAGGAAAGTTAAAGG...AGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | ATAACATGCATTATTAAGTCAAGATTCAAGGTTAACCCACAGCACACAGATCTCATCAGCAGCTCAAAATaGTCCCGATCAAGAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ITCIIKSRFKVNPQHTDLISSSK*SRSRAF Trigger: GAAGGCTCTTGATCGGGACAATTTTGAGCTGCTGAT...GAGATCTGTGTGCTGTGGGTTAACCTTGAATCTTGACTTAATAATGCATGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | ACCTGTTGGCTAGATTTACATTTCTCCAGCAGATGGACTGTATTGTCCAAAGGAAGCTGGACATTTCTCTaGTTAGCAGCAAGATTAATG | + |
|
Preference number: 5 (lower is better) Translates to: TCWLDLHFSSRWTVLSKGSWTFL*LAARLM Trigger: CATTAATCTTGCTGCTAACAAGAGAAATGTCCAGCT...TCCTTTGGACAATACAGTCCATCTGCTGGAGAAATGTAAATCTAGCCAACAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | GGTAAAAGGGAAACAAAGACAATAACTGCATGCTTTCAGATTGTGAATTCACAAATCAGCAGTGGGTCCTaGAGCTTCAGAGCTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GKRETKTITACFQIVNSQISSGS*SFRALF Trigger: GAAAAGAGCTCTGAAGCTCAAGGACCCACTGCTGAT...TTGTGAATTCACAATCTGAAAGCATGCAGTTATTGTCTTTGTTTCCCTTTTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | CAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTAGATTTCAGACGGATGATTTTTaGGCATTCCTTTCGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QCLRSFMYQVRTYLLARFQTDDF*AFLSFS Trigger: GGAGAACGAAAGGAATGCCAAAAAATCATCCGTCTG...AAATCTAGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | AAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTAGACAGACGGATGATTTTTaGGCATTCCTTTCGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KQCLRSFMYQVRTYLLARQTDDF*AFLSFS Trigger: GGAGAACGAAAGGAATGCCAAAAAATCATCCGTCTG...TCTAGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | AATTTCCCACTACCCACTTCTATCTTAAGTGAACAAACAGAGAGTCCTTTCCTTCTTAGAGAGTTCTTCTaGCCAAAGCTCGTGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NFPLPTSILSEQTESPFLLREFF*PKLVSF Trigger: AAAAGACACGAGCTTTGGCAAGAAGAACTCTCTAAG...AAGGAAAGGACTCTCTGTTTGTTCACTTAAGATAGAAGTGGGTAGTGGGAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | GGTAAAAGGGAAACAAAGACAATAACTGCATGCTTTCAGATTGTGAATTCACAATCCATGTCATTAATGTaGGCCACTTCGTCAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GKRETKTITACFQIVNSQSMSLM*ATSSIS Trigger: GGAGATTGACGAAGTGGCCAACATTAATGACATGGA...TTGTGAATTCACAATCTGAAAGCATGCAGTTATTGTCTTTGTTTCCCTTTTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | CATAAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTAAATTCATCATCTTCTaGTTGAGCGTTCAGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HKQCLRSFMYQVRTYLLAKFIIF*LSVQQL Trigger: GAGCTGCTGAACGCTCAACAAGAAGATGATGAATTT...AGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | AAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTAGAAAATTCATCATCTTCTaGTTGAGCGTTCAGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KQCLRSFMYQVRTYLLARKFIIF*LSVQQL Trigger: GAGCTGCTGAACGCTCAACAAGAAGATGATGAATTT...TCTAGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | GGTAAAAGGGAAACAAAGACAATAACTGCATGCTTTCAGATTGTGAATTCACAACACTTGCAAAGCACTTaGAAATCCTTGGATGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: GKRETKTITACFQIVNSQHLQST*KSLDGQ Trigger: CTGTCCATCCAAGGATTTCAAAGTGCTTTGCAAGTG...TTGTGAATTCACAATCTGAAAGCATGCAGTTATTGTCTTTGTTTCCCTTTTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | GGTAAAAGGGAAACAAAGACAATAACTGCATGCTTTCAGATTGTGAATTCACAAGGAGCTTGTGTTTCCTaGATTATGACATCTCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GKRETKTITACFQIVNSQGACVS*IMTSLV Trigger: CACAAGAGATGTCATAATCAAGGAAACACAAGCTCC...TTGTGAATTCACAATCTGAAAGCATGCAGTTATTGTCTTTGTTTCCCTTTTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | CATAAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTCACACACATTGCTATTaGTTTGTAGTTTTCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HKQCLRSFMYQVRTYLLAHTHCY*FVVFIA Trigger: GGCAATGAAAACTACAAACAAATAGCAATGTGTGTG...AGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS-3UTR CAA 90 bp | AAACAATGTCTCAGGTCATTTATGTATCAGGTAAGAACATACCTGTTGGCTAGACACACACATTGCTATTaGTTTGTAGTTTTCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KQCLRSFMYQVRTYLLARHTHCY*FVVFIA Trigger: GGCAATGAAAACTACAAACAAATAGCAATGTGTGTG...TCTAGCCAACAGGTATGTTCTTACCTGATACATAAATGACCTGAGACATTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS GCA 90 bp | TCTAATGTGTTATCACAGACTTTCCGGATTTCATTATTTTTATCATaGATCAGGTCAATGAGATATGCTGGAGCTTGTGTTTCCTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: SNVLSQTFRISLFLS*IRSMRYAGACVSLI Trigger: AATCAAGGAAACACAAGCTCCAGCATATCTCATTGACCTGATGCATGATAAAAATAATGAAATCCGGAAAGTCTGTGATAACACATTAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS CCA 72 bp | TCCATACGCGGTGGCAGGACGTCCAAGGATCCCCAGTaGCTGCCCGAAGCCATCCATCCCGAGGCTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SIRGGRTSKDPQ*LPEAIHPEAAR Trigger: CCTGGCAGCCTCGGGATGGATGGCTTCGGGCAGCCACTGGGGATCCTTGGACGTCCTGCCACCGCGTATGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027877.7 |
||
| CDS GCA 72 bp | TCCCCAGTGGCTGCCCGAAGCCATCCATCCCGAGGCTaGCAGGAAATGCGTGTTGCCCCACCACATCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SPVAARSHPSRG*QEMRVAPPHLH Trigger: ATGGAGATGTGGTGGGGCAACACGCATTTCCTGGCAGCCTCGGGATGGATGGCTTCGGGCAGCCACTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027877.7 |
||
| CDS CAA 90 bp | CCCAGGAGTGCAGTGAGCTTTGGGAGAAGCCCAACTTGTACCATCTaGTTCCTCAGGCCTGTGTCAAACGAGAGGTTTAAGAGGAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PRSAVSFGRSPTCTI*FLRPVSNERFKRSR Trigger: CCGGCTCCTCTTAAACCTCTCGTTTGACACAGGCCTGAGGAACAAGATGGTACAAGTTGGGCTTCTCCCAAAGCTCACTGCACTCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS TCA 72 bp | AAAGCTGCTCCACCTCGCTTAGCTTTGAGGGATGGATaGGCTTACATTCCTCAACCACCTTCCGGGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: KAAPPRLALRDG*AYIPQPPSGPE Trigger: CTCTGGCCCGGAAGGTGGTTGAGGAATGTAAGCTCATCCATCCCTCAAAGCTAAGCGAGGTGGAGCAGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS CAA 72 bp | GCCCAGGAGTGCAGTGAGCTTTGGGAGAAGCCCAACTaGTACCATCTTGTTCCTCAGGCCTGTGTCAAACGA | + |
|
Preference number: 6 (lower is better) Translates to: AQECSELWEKPN*YHLVPQACVKR Trigger: TCGTTTGACACAGGCCTGAGGAACAAGATGGTACAAGTTGGGCTTCTCCCAAAGCTCACTGCACTCCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS CCA 72 bp | TACAAAAGCTGCTCCACCTCGCTTAGCTTTGAGGGATaGATGAGCTTACATTCCTCAACCACCTTCCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: YKSCSTSLSFEG*MSLHSSTTFRA Trigger: GGCCCGGAAGGTGGTTGAGGAATGTAAGCTCATCCATCCCTCAAAGCTAAGCGAGGTGGAGCAGCTTTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS CAA 72 bp | TTCAGCAGCTCGATGAGGGCTGGGATTATCCCAGATTaGGCCAGTAGGGCAGCACAAGAGTCATCCATAGAC | + |
|
Preference number: 6 (lower is better) Translates to: FSSSMRAGIIPD*ASRAAQESSID Trigger: GTCTATGGATGACTCTTGTGCTGCCCTACTGGCCAAATCTGGGATAATCCCAGCCCTCATCGAGCTGCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS CAA 72 bp | AGGTCATCCTCTGCGGCACCTGGCTTTAGTTTGTCTTaGAGGAATGGAACCAGCTTGTACTCCTTCAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: RSSSAAPGFSLS*RNGTSLYSFRT Trigger: GGTCCTGAAGGAGTACAAGCTGGTTCCATTCCTCAAAGACAAACTAAAGCCAGGTGCCGCAGAGGATGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS CAA 90 bp | TCTGCGGCACCTGGCTTTAGTTTGTCTTTGAGGAATGGAACCAGCTaGTACTCCTTCAGGACCAGTTCCCAGTCTAGATCTGGGATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SAAPGFSLSLRNGTS*YSFRTSSQSRSGIV Trigger: GACAATCCCAGATCTAGACTGGGAACTGGTCCTGAAGGAGTACAAGCTGGTTCCATTCCTCAAAGACAAACTAAAGCCAGGTGCCGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS TCA 72 bp | ATTCATCATCTTCTTGTTGAGCGTTCAGCAGCTCGATaGGGGCTGGGATTATCCCAGATTTGGCCAGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: IHHLLVERSAAR*GLGLSQIWPVG Trigger: CCCTACTGGCCAAATCTGGGATAATCCCAGCCCTCATCGAGCTGCTGAACGCTCAACAAGAAGATGATGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS CAA 90 bp | CCAGCTTGTACTCCTTCAGGACCAGTTCCCAGTCTAGATCTGGGATaGTCAGATTTGCCAGCGTTCCCAAACACTCGATTACAAACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PACTPSGPVPSLDLG*SDLPAFPNTRLQTP Trigger: AGGAGTTTGTAATCGAGTGTTTGGGAACGCTGGCAAATCTGACAATCCCAGATCTAGACTGGGAACTGGTCCTGAAGGAGTACAAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS TCA 72 bp | CTGTGTCAAACGAGAGGTTTAAGAGGAGCCGGAGGGTaGTATTCAGGAGATCTTCATGCTCACAGGGTATCA | + |
|
Preference number: 6 (lower is better) Translates to: LCQTRGLRGAGG*YSGDLHAHRVS Trigger: TGATACCCTGTGAGCATGAAGATCTCCTGAATATCACCCTCCGGCTCCTCTTAAACCTCTCGTTTGACACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS CAA 72 bp | GGACCAGTTCCCAGTCTAGATCTGGGATTGTCAGATTaGCCAGCGTTCCCAAACACTCGATTACAAACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPVPSLDLGLSD*PAFPNTRLQTP Trigger: AGGAGTTTGTAATCGAGTGTTTGGGAACGCTGGCAAATCTGACAATCCCAGATCTAGACTGGGAACTGGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS CAA 72 bp | ACTCCTTCAGGACCAGTTCCCAGTCTAGATCTGGGATaGTCAGATTTGCCAGCGTTCCCAAACACTCGATTA | + |
|
Preference number: 6 (lower is better) Translates to: TPSGPVPSLDLG*SDLPAFPNTRL Trigger: TAATCGAGTGTTTGGGAACGCTGGCAAATCTGACAATCCCAGATCTAGACTGGGAACTGGTCCTGAAGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS CAA 90 bp | ACTCCTTCAGGACCAGTTCCCAGTCTAGATCTGGGATTGTCAGATTaGCCAGCGTTCCCAAACACTCGATTACAAACTCCTCCTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: TPSGPVPSLDLGLSD*PAFPNTRLQTPPLH Trigger: ATGAAGAGGAGGAGTTTGTAATCGAGTGTTTGGGAACGCTGGCAAATCTGACAATCCCAGATCTAGACTGGGAACTGGTCCTGAAGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS CAA 90 bp | ACCACTTCTAAAACAAGGTCATCCTCTGCGGCACCTGGCTTTAGTTaGTCTTTGAGGAATGGAACCAGCTTGTACTCCTTCAGGACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TTSKTRSSSAAPGFS*SLRNGTSLYSFRTS Trigger: ACTGGTCCTGAAGGAGTACAAGCTGGTTCCATTCCTCAAAGACAAACTAAAGCCAGGTGCCGCAGAGGATGACCTTGTTTTAGAAGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS TCA 72 bp | AATGCGTGTTGCCCCACCACATCTCCATTCTGGAGGTaGAAATCATTGAAGAAGTCTGGACTTATGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: NACCPTTSPFWR*KSLKKSGLMAP Trigger: AGGAGCCATAAGTCCAGACTTCTTCAATGATTTTCACCTCCAGAATGGAGATGTGGTGGGGCAACACGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS CAA 72 bp | AAAACAAGGTCATCCTCTGCGGCACCTGGCTTTAGTTaGTCTTTGAGGAATGGAACCAGCTTGTACTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: KTRSSSAAPGFS*SLRNGTSLYSF Trigger: GAAGGAGTACAAGCTGGTTCCATTCCTCAAAGACAAACTAAAGCCAGGTGCCGCAGAGGATGACCTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS GCA 72 bp | TTTCAAGAATGTCCCCTTCATGGATGTACGGCTCAATaGGATCATCACCATACAAGTACTGCTCGCTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: FQECPLHGCTAQ*DHHHTSTARSH Trigger: ATGAGAGCGAGCAGTACTTGTATGGTGATGATCGCATTGAGCCGTACATCCATGAAGGGGACATTCTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
||
| CDS CCA 72 bp | ATGCTGGGAGATGTTTCTGATCATCTTCATCAGCAGTaGGTCCTTGAGCTTCAGAGCTCTTTTCATGAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: MLGDVSDHLHQQ*VLELQSSFHEH Trigger: ATGCTCATGAAAAGAGCTCTGAAGCTCAAGGACCCACTGCTGATGAAGATGATCAGAAACATCTCCCAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS CCA 72 bp | CCAAACACTCGATTACAAACTCCTCCTCTTCATCACTaGAAATCTGGGCTGCAAGGTCCCCAACATAATCAA | + |
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Preference number: 6 (lower is better) Translates to: PNTRLQTPPLHH*KSGLQGPQHNQ Trigger: TTGATTATGTTGGGGACCTTGCAGCCCAGATTTCCAGTGATGAAGAGGAGGAGTTTGTAATCGAGTGTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS CAA 90 bp | AAAGCGGTCATCCATGCTTATATGGTAAAGCACACACATTGCTATTaGTTTGTAGTTTTCATTGCCCAGGAGTGCAGTGAGCTTTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: KAVIHAYMVKHTHCY*FVVFIAQECSELWE Trigger: CTCCCAAAGCTCACTGCACTCCTGGGCAATGAAAACTACAAACAAATAGCAATGTGTGTGCTTTACCATATAAGCATGGATGACCGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS CAA 90 bp | CTGGTAGAAGACATAGATTATTTGACACACAAATTCATCATCTTCTaGTTGAGCGTTCAGCAGCTCGATGAGGGCTGGGATTATCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: LVEDIDYLTHKFIIF*LSVQQLDEGWDYPR Trigger: TCTGGGATAATCCCAGCCCTCATCGAGCTGCTGAACGCTCAACAAGAAGATGATGAATTTGTGTGTCAAATAATCTATGTCTTCTACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS GCA 72 bp | AAGAGGAGCCGGAGGGTGATATTCAGGAGATCTTCATaGTCACAGGGTATCATTTTTACCAGTTTTTCAACA | + |
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Preference number: 6 (lower is better) Translates to: KRSRRVIFRRSS*SQGIIFTSFST Trigger: TGTTGAAAAACTGGTAAAAATGATACCCTGTGAGCATGAAGATCTCCTGAATATCACCCTCCGGCTCCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS CAA 72 bp | GACATAGATTATTTGACACACAAATTCATCATCTTCTaGTTGAGCGTTCAGCAGCTCGATGAGGGCTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: DIDYLTHKFIIF*LSVQQLDEGWD Trigger: ATCCCAGCCCTCATCGAGCTGCTGAACGCTCAACAAGAAGATGATGAATTTGTGTGTCAAATAATCTATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS CAA 90 bp | TCTTGTGGCCTGATGGAACACCATCTGGTAGAAGACATAGATTATTaGACACACAAATTCATCATCTTCTTGTTGAGCGTTCAGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SCGLMEHHLVEDIDY*THKFIIFLLSVQQL Trigger: GAGCTGCTGAACGCTCAACAAGAAGATGATGAATTTGTGTGTCAAATAATCTATGTCTTCTACCAGATGGTGTTCCATCAGGCCACAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS CAA 72 bp | TACAAGAGCTCAATGTATTCGTCCATGTCATTAATGTaGGCCACTTCGTCAATCTCCATCCCTTCAAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: YKSSMYSSMSLM*ATSSISIPSKG Trigger: TCCTTTTGAAGGGATGGAGATTGACGAAGTGGCCAACATTAATGACATGGACGAATACATTGAGCTCTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS CAA 72 bp | AGCGGTCATCCATGCTTATATGGTAAAGCACACACATaGCTATTTGTTTGTAGTTTTCATTGCCCAGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: SGHPCLYGKAHT*LFVCSFHCPGV Trigger: CACTCCTGGGCAATGAAAACTACAAACAAATAGCAATGTGTGTGCTTTACCATATAAGCATGGATGACCGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS CAA 72 bp | AGCCCATTTCCTTCACAGATGAGCTGGACATTTCTCTaGTTAGCAGCAAGATTAATGCAGAAAGAAATCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPFPSQMSWTFL*LAARLMQKEIS Trigger: GCTGATTTCTTTCTGCATTAATCTTGCTGCTAACAAGAGAAATGTCCAGCTCATCTGTGAAGGAAATGGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS CAA 90 bp | AGCATTTTCAGCCCATTTCCTTCACAGATGAGCTGGACATTTCTCTaGTTAGCAGCAAGATTAATGCAGAAAGAAATCAGCTCCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: SIFSPFPSQMSWTFL*LAARLMQKEISSKS Trigger: TGACTTGGAGCTGATTTCTTTCTGCATTAATCTTGCTGCTAACAAGAGAAATGTCCAGCTCATCTGTGAAGGAAATGGGCTGAAAATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS CAA 90 bp | GTAGAAGACATAGATTATTTGACACACAAATTCATCATCTTCTTGTaGAGCGTTCAGCAGCTCGATGAGGGCTGGGATTATCCCAGATTT | + |
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Preference number: 6 (lower is better) Translates to: VEDIDYLTHKFIIFL*SVQQLDEGWDYPRF Trigger: AAATCTGGGATAATCCCAGCCCTCATCGAGCTGCTGAACGCTCAACAAGAAGATGATGAATTTGTGTGTCAAATAATCTATGTCTTCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS TCA 72 bp | TCAAAATTGTCCCGATCAAGAGCCTTCACCAACATGTaGACGATATTCTTGTTCCTCATCTTCAGTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: SKLSRSRAFTNM*TIFLFLIFSSV Trigger: TACAGAACTGAAGATGAGGAACAAGAATATCGTTCACATGTTGGTGAAGGCTCTTGATCGGGACAATTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS CAA 72 bp | ATCCATGCTTATATGGTAAAGCACACACATTGCTATTaGTTTGTAGTTTTCATTGCCCAGGAGTGCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: IHAYMVKHTHCY*FVVFIAQECSE Trigger: CTCACTGCACTCCTGGGCAATGAAAACTACAAACAAATAGCAATGTGTGTGCTTTACCATATAAGCATGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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| CDS GCA 72 bp | TTCATTATTTTTATCATGCATCAGGTCAATGAGATATaGTGGAGCTTGTGTTTCCTTGATTATGACATCTCT | + |
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Preference number: 6 (lower is better) Translates to: FIIFIMHQVNEI*WSLCFLDYDIS Trigger: AGAGATGTCATAATCAAGGAAACACAAGCTCCAGCATATCTCATTGACCTGATGCATGATAAAAATAATGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027877.7 ENSMUST00000077642.12 |
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