Pregenerated sensors for KIF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023999Ensembl transcript IDs: ENSMUST00000162029.8, ENSMUST00000162854.2
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTTGGATCGCATGCCAGGGGCACGAGGGTGCTGCTCAGATCTTCTaGGTAAAGGGCTCCTCCTCTGGCCTCAGATTTGCCAGCTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: VWIACQGHEGAAQIF*VKGSSSGLRFASCF Trigger: GAAGCAGCTGGCAAATCTGAGGCCAGAGGAGGAGCCCTTTACCCAGAAGATCTGAGCAGCACCCTCGTGCCCCTGGCATGCGATCCAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR GCA 90 bp | AGGTGCCCTACATTCTTATCTAGGACTTTGGAGGCCTGCCTGGCTTaGCACGGCCATTCCTGGGCTTGTAAGCCAGGGGTAGCCTTGGGT | + |
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Preference number: 1 (lower is better) Translates to: RCPTFLSRTLEACLA*HGHSWACKPGVALG Trigger: ACCCAAGGCTACCCCTGGCTTACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATAAGAATGTAGGGCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR CCA 90 bp | CTGACTGTGCTCCCCTCTCTTTTGTGTCCACTTAGCCCAAGACACTaGGCCAGGTTGCCAGATGCCGGGAGGGTCACTGAGGCAAGATCA | + |
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Preference number: 1 (lower is better) Translates to: LTVLPSLLCPLSPRH*ARLPDAGRVTEARS Trigger: TGATCTTGCCTCAGTGACCCTCCCGGCATCTGGCAACCTGGCCCAGTGTCTTGGGCTAAGTGGACACAAAAGAGAGGGGAGCACAGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR GCA 90 bp | ATCTTCTGGGTAAAGGGCTCCTCCTCTGGCCTCAGATTTGCCAGCTaGTTCCTGGGGAGTCTTTCCATCGAATGTGAGGTCACGAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: IFWVKGSSSGLRFAS*FLGSLSIECEVTSE Trigger: CTCACTCGTGACCTCACATTCGATGGAAAGACTCCCCAGGAAGCAGCTGGCAAATCTGAGGCCAGAGGAGGAGCCCTTTACCCAGAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR-3UTR GCA 90 bp | TTATCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTCTCTGGCCTCAGATTTaGCAGCTGCTTCCTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LSRTLEACLACHGHSWACLWPQI*QLLPGE Trigger: CTCCCCAGGAAGCAGCTGGCAAATCTGAGGCCAGAG...ACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCCATGCAACTTGGTGGGGTGATGGCTCAGGGAACTGCGAGCTGTAGAGCTGGGGCACGAGGGTGCTaGTCAGATCTTCTGGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: SPMQLGGVMAQGTASCRAGARGC*SDLLGK Trigger: TTTACCCAGAAGATCTGAGCAGCACCCTCGTGCCCC...AGCTCTACAGCTCGCAGTTCCCTGAGCCATCACCCCACCAAGTTGCATGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR CAA 90 bp | GGTTCTCCAAAACCTGTCAGTGAGTCCTGGCTGGCCTCCAGCTTCTaGGTAGTGCCCACCCTGTCAGCAACTCTGTCAGGACTTCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: GSPKPVSESWLASSF*VVPTLSATLSGLPV Trigger: GACAGGAAGTCCTGACAGAGTTGCTGACAGGGTGGGCACTACCAAGAAGCTGGAGGCCAGCCAGGACTCACTGACAGGTTTTGGAGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR-3UTR CCA 90 bp | TTATCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTAAAGGGCTCCTCCTCTaGCCTCAGATTTGCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LSRTLEACLACHGHSWACKGLLL*PQICQL Trigger: CAGCTGGCAAATCTGAGGCCAGAGGAGGAGCCCTTT...ACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR-3UTR CCA 90 bp | GCAACTCTGTCAGGACTTCCTGTCAGCCCTGCATGCCCTCCTAGACACCATCCTCAGCTGCCTAAAGTTTaGATCGCATGCCAGGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: ATLSGLPVSPACPPRHHPQLPKV*IACQGH Trigger: GTGCCCCTGGCATGCGATCCAAACTTTAGGCAGCTG...AGGATGGTGTCTAGGAGGGCATGCAGGGCTGACAGGAAGTCCTGACAGAGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR-3UTR GCA 90 bp | GTACATAGCTCCCTGAAGACGGGGCAAGTGGGTGATGGTTTGGGCTGGTACGGTCTCAGATTTGCCAGCTaGTTCCTGGGGAGTCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: VHSSLKTGQVGDGLGWYGLRFAS*FLGSLS Trigger: GGAAAGACTCCCCAGGAAGCAGCTGGCAAATCTGAG...ACCGTACCAGCCCAAACCATCACCCACTTGCCCCGTCTTCAGGGAGCTATGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCTATCATCCTCCTGCATTGCACTGCCTGGAATGTCCCCACCTGTGTATCATAGTAGCCATTCTGTCTaGAGGGCAGGGTTGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: GLSSSCIALPGMSPPVYHSSHSV*RAGLDS Trigger: GGAGTCCAACCCTGCCCTGCAGACAGAATGGCTACT...ATGATACACAGGTGGGGACATTCCAGGCAGTGCAATGCAGGAGGATGATAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGGCTTCGTGTCTGGGATCCAGCAGGTCATAGCCACATTCGTTGTAGATTTCGCCCGTCTGCCCATATaGGAAGATGGTGCCATTGTA | + |
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Preference number: 2 (lower is better) Translates to: GGFVSGIQQVIATFVVDFARLPI*EDGAIV Trigger: TACAATGGCACCATCTTCGCATATGGGCAGACGGGC...GAAATCTACAACGAATGTGGCTATGACCTGCTGGATCCCAGACACGAAGCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTCTGAGTAGCTTCCCACTGCTTTCTGGTACTGTGAGGTCCTCAGACTGCTTGCCAGCTGCTTCCTaGGGAGTCTTTCCATCGAAT | + |
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Preference number: 2 (lower is better) Translates to: RALSSFPLLSGTVRSSDCLPAAS*GVFPSN Trigger: ATTCGATGGAAAGACTCCCCAGGAAGCAGCTGGCAA...GCAGTCTGAGGACCTCACAGTACCAGAAAGCAGTGGGAAGCTACTCAGAGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCTTCGTGTCTGGGATCCAGCAGGTCATAGCCACATTCGTTGTAGATTTCGTACGACAGGGTCCTTaGGATGATGCCTCTGTCACT | + |
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Preference number: 2 (lower is better) Translates to: GGFVSGIQQVIATFVVDFVRQGP*DDASVT Trigger: AGTGACAGAGGCATCATCCCAAGGACCCTGTCGTAC...GAAATCTACAACGAATGTGGCTATGACCTGCTGGATCCCAGACACGAAGCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTTCGTGTCTGGGATCCAGCAGGTCATAGCCACATTCGTTGTAGATTTCCAAGCCCATATGCGAAGATaGTGCCATTGTAACCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: GFVSGIQQVIATFVVDFQAHMRR*CHCNLP Trigger: TGGCAGGTTACAATGGCACCATCTTCGCATATGGGC...TTGGAAATCTACAACGAATGTGGCTATGACCTGCTGGATCCCAGACACGAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAACTGCTCAAAAATGTACGACAGGGTCCTTGGGATGATGCCTCTGTCACTGCCCAGGAGAGTGACATaGGCTACTGGACTAGAAATT | + |
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Preference number: 2 (lower is better) Translates to: CNCSKMYDRVLGMMPLSLPRRVT*ATGLEI Trigger: AATTTCTAGTCCAGTAGCTCATGTCACTCTCCTGGG...CAGTGACAGAGGCATCATCCCAAGGACCCTGTCGTACATTTTTGAGCAGTTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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| 3UTR-3UTR GCA 90 bp | TGCAACTGCTCAAAAATGTACGACAGGGTCCTTGGGATGATGCCTCTGTCACTGCATATGCGAAGATGGTaGCATTGTAACCTGCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: CNCSKMYDRVLGMMPLSLHMRRW*HCNLPR Trigger: CCTTGGCAGGTTACAATGGCACCATCTTCGCATATG...CAGTGACAGAGGCATCATCCCAAGGACCCTGTCGTACATTTTTGAGCAGTTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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| 3UTR-3UTR GCA 90 bp | GCCACATTCGTTGTAGATTTCCAAGTAAGAAATGTGTGTCGTGTAGATCTTGCTTTGCCACTGCCCGTCTaGCCATATGCGAAGATGGTG | + |
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Preference number: 2 (lower is better) Translates to: ATFVVDFQVRNVCRVDLALPLPV*PYAKMV Trigger: CACCATCTTCGCATATGGGCAGACGGGCAGTGGCAA...AGCAAGATCTACACGACACACATTTCTTACTTGGAAATCTACAACGAATGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCTTCGTGTCTGGGATCCAGCAGGTCATAGCCACATTCGTTGTAGATTTCACTGGACTAGAAATTTaGCTTCATTTAGCAGACATA | + |
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Preference number: 2 (lower is better) Translates to: GGFVSGIQQVIATFVVDFTGLEI*LHLADI Trigger: TATGTCTGCTAAATGAAGCCAAATTTCTAGTCCAGT...GAAATCTACAACGAATGTGGCTATGACCTGCTGGATCCCAGACACGAAGCCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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| 3UTR-3UTR GCA 90 bp | TTCGTGTCTGGGATCCAGCAGGTCATAGCCACATTCGTTGTAGATTTCCAAGTATTGCTGCTGTCCTTTTaGAACTGCTCAAAAATGTAC | + |
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Preference number: 2 (lower is better) Translates to: FVSGIQQVIATFVVDFQVLLLSF*NCSKMY Trigger: GTACATTTTTGAGCAGTTGCAAAAGGACAGCAGCAA...TACTTGGAAATCTACAACGAATGTGGCTATGACCTGCTGGATCCCAGACACGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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| 3UTR-3UTR CAA 90 bp | AGCCCCATGCAACTTGGTGGGGTGATGGCTCAGGGAACTGCGAGCTGTAGAGCTGGAGGCCTGCCTGGCTaGCCACGGCCATTCCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: SPMQLGGVMAQGTASCRAGGLPG*PRPFLG Trigger: GCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCC...AGCTCTACAGCTCGCAGTTCCCTGAGCCATCACCCCACCAAGTTGCATGGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR CCA 72 bp | GCATGCCAGGGGCACGAGGGTGCTGCTCAGATCTTCTaGGTAAAGGGCTCCTCCTCTGGCCTCAGATTTGCC | + |
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Preference number: 3 (lower is better) Translates to: ACQGHEGAAQIF*VKGSSSGLRFA Trigger: GGCAAATCTGAGGCCAGAGGAGGAGCCCTTTACCCAGAAGATCTGAGCAGCACCCTCGTGCCCCTGGCATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR GCA 72 bp | GGTCCTTGGGATGATGCCTCTGTCACTGTAGCGCTCTaGCCCGCCTGTGATGGTGAATGTCTTGCCACTGCC | + |
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Preference number: 3 (lower is better) Translates to: GPWDDASVTVAL*PACDGECLATA Trigger: GGCAGTGGCAAGACATTCACCATCACAGGCGGGGCAGAGCGCTACAGTGACAGAGGCATCATCCCAAGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCAGGGTTCTCCAAAACCTGTCAGTGAGTCCTGGCTGGCCTCCAGCTTCTTGCCTCTGGCCTCAGATTaGCCAGCTGCTTCCTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: LQGSPKPVSESWLASSFLPLASD*PAASWG Trigger: TCCCCAGGAAGCAGCTGGCAAATCTGAGGCCAGAGG...CAAGAAGCTGGAGGCCAGCCAGGACTCACTGACAGGTTTTGGAGAACCCTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR CCA 72 bp | CATCTCCAGGGTTCTCCAAAACCTGTCAGTGAGTCCTaGCTGGCCTCCAGCTTCTTGGTAGTGCCCACCCTG | + |
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Preference number: 3 (lower is better) Translates to: HLQGSPKPVSES*LASSFLVVPTL Trigger: CAGGGTGGGCACTACCAAGAAGCTGGAGGCCAGCCAGGACTCACTGACAGGTTTTGGAGAACCCTGGAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR TCA 72 bp | ACTGCACCATCTCCAGGGTTCTCCAAAACCTGTCAGTaGGTCCTGGCTGGCCTCCAGCTTCTTGGTAGTGCC | + |
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Preference number: 3 (lower is better) Translates to: TAPSPGFSKTCQ*VLAGLQLLGSA Trigger: GGCACTACCAAGAAGCTGGAGGCCAGCCAGGACTCACTGACAGGTTTTGGAGAACCCTGGAGATGGTGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR TCA 72 bp | GCAACTGCTCAAAAATGTACGACAGGGTCCTTGGGATaGTGCCTCTGTCACTGTAGCGCTCTGCCCCGCCTG | + |
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Preference number: 3 (lower is better) Translates to: ATAQKCTTGSLG*CLCHCSALPRL Trigger: CAGGCGGGGCAGAGCGCTACAGTGACAGAGGCATCATCCCAAGGACCCTGTCGTACATTTTTGAGCAGTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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| 3UTR GCA 72 bp | GCACCCATAGTTCAGCTGCCTAAAGTTTGGATCGCATaGCAGGGGCACGAGGGTGCTGCTCAGATCTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: APIVQLPKVWIA*QGHEGAAQIFW Trigger: CCAGAAGATCTGAGCAGCACCCTCGTGCCCCTGGCATGCGATCCAAACTTTAGGCAGCTGAACTATGGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR CCA 72 bp | GCTCCTCCTCTGGCCTCAGATTTGCCAGCTGCTTCCTaGGGAGTCTTTCCATCGAATGTGAGGTCACGAGTG | + |
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Preference number: 3 (lower is better) Translates to: APPLASDLPAAS*GVFPSNVRSRV Trigger: CACTCGTGACCTCACATTCGATGGAAAGACTCCCCAGGAAGCAGCTGGCAAATCTGAGGCCAGAGGAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR CCA 72 bp | TGCTGCTCAGATCTTCTGGGTAAAGGGCTCCTCCTCTaGCCTCAGATTTGCCAGCTGCTTCCTGGGGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: CCSDLLGKGLLL*PQICQLLPGES Trigger: AGACTCCCCAGGAAGCAGCTGGCAAATCTGAGGCCAGAGGAGGAGCCCTTTACCCAGAAGATCTGAGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR CCA 72 bp | GCCCTACATTCTTATCTAGGACTTTGGAGGCCTGCCTaGCTTGCCACGGCCATTCCTGGGCTTGTAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: ALHSYLGLWRPA*LATAIPGLVSQ Trigger: CTGGCTTACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATAAGAATGTAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR GCA 72 bp | GTAAAGGGCTCCTCCTCTGGCCTCAGATTTGCCAGCTaGTTCCTGGGGAGTCTTTCCATCGAATGTGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: VKGSSSGLRFAS*FLGSLSIECEV Trigger: GACCTCACATTCGATGGAAAGACTCCCCAGGAAGCAGCTGGCAAATCTGAGGCCAGAGGAGGAGCCCTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR GCA 72 bp | CTTCTGGGTAAAGGGCTCCTCCTCTGGCCTCAGATTTaGCAGCTGCTTCCTGGGGAGTCTTTCCATCGAATG | + |
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Preference number: 3 (lower is better) Translates to: LLGKGLLLWPQI*QLLPGESFHRM Trigger: CATTCGATGGAAAGACTCCCCAGGAAGCAGCTGGCAAATCTGAGGCCAGAGGAGGAGCCCTTTACCCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR GCA 72 bp | ACATTCTTATCTAGGACTTTGGAGGCCTGCCTGGCTTaGCACGGCCATTCCTGGGCTTGTAAGCCAGGGGTA | + |
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Preference number: 3 (lower is better) Translates to: TFLSRTLEACLA*HGHSWACKPGV Trigger: TACCCCTGGCTTACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATAAGAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR GCA 72 bp | TCAGCAACTCTGTCAGGACTTCCTGTCAGCCCTGCATaGCCTCCTAGACACCATCCTCTAAGAAGTAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: SATLSGLPVSPA*PPRHHPLRSSH Trigger: GTGACTACTTCTTAGAGGATGGTGTCTAGGAGGGCATGCAGGGCTGACAGGAAGTCCTGACAGAGTTGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR GCA 72 bp | CTGGAATGTCCCCACCTGTGTATCATGATGGTGCACTaGACCATCTCCAGGGTTCTCCAAAACCTGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: LECPHLCIMMVH*TISRVLQNLSV Trigger: CACTGACAGGTTTTGGAGAACCCTGGAGATGGTGCAGTGCACCATCATGATACACAGGTGGGGACATTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCAGGGTTCTCCAAAACCTGTCAGTGAGTCCTGGCTGGCCTCCAGCTTCTTGGATTTAAGTCTGTGTTaGAGCACCCATAGTTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: LQGSPKPVSESWLASSFLDLSLC*STHSSA Trigger: AGCTGAACTATGGGTGCTCAAACACAGACTTAAATC...CAAGAAGCTGGAGGCCAGCCAGGACTCACTGACAGGTTTTGGAGAACCCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR TCA 72 bp | CTGCCAAGGTACCCCAGCGTTCCCAGGAGAGTGACATaGGCTACTGGACTAGAAATTTGGCTTCATTTAGCA | + |
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Preference number: 3 (lower is better) Translates to: LPRYPSVPRRVT*ATGLEIWLHLA Trigger: TGCTAAATGAAGCCAAATTTCTAGTCCAGTAGCTCATGTCACTCTCCTGGGAACGCTGGGGTACCTTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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| 3UTR CCA 72 bp | GTACCCCAGCGTTCCCAGGAGAGTGACATGAGCTACTaGACTAGAAATTTGGCTTCATTTAGCAGACATAAG | + |
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Preference number: 3 (lower is better) Translates to: VPQRSQESDMSY*TRNLASFSRHK Trigger: CTTATGTCTGCTAAATGAAGCCAAATTTCTAGTCCAGTAGCTCATGTCACTCTCCTGGGAACGCTGGGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGGGATCCAGCAGGTCATAGCCACATTCGTTGTAGATTTCCAAGTAAGAAATTACTGGACTAGAAATTaGGCTTCATTTAGCAGACAT | + |
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Preference number: 3 (lower is better) Translates to: SGIQQVIATFVVDFQVRNYWTRN*ASFSRH Trigger: ATGTCTGCTAAATGAAGCCAAATTTCTAGTCCAGTA...ATTTCTTACTTGGAAATCTACAACGAATGTGGCTATGACCTGCTGGATCCCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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| 3UTR-3UTR CAA 90 bp | GTCATAGCCACATTCGTTGTAGATTTCCAAGTAAGAAATGTGTGTCGTGTAGATCTTGCTGCTGTCCTTTaGCAACTGCTCAAAAATGTA | + |
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Preference number: 3 (lower is better) Translates to: VIATFVVDFQVRNVCRVDLAAVL*QLLKNV Trigger: TACATTTTTGAGCAGTTGCAAAAGGACAGCAGCAAG...ATCTACACGACACACATTTCTTACTTGGAAATCTACAACGAATGTGGCTATGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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| 3UTR GCA 72 bp | AGATTTCCAAGTAAGAAATGTGTGTCGTGTAGATCTTaGTGCTGTCCTTTTGCAACTGCTCAAAAATGTACG | + |
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Preference number: 3 (lower is better) Translates to: RFPSKKCVSCRS*CCPFATAQKCT Trigger: CGTACATTTTTGAGCAGTTGCAAAAGGACAGCAGCAAGATCTACACGACACACATTTCTTACTTGGAAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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| CDS-3UTR CCA 90 bp | TGCCAGGGGCACGAGGGTGCTGCTCAGATCTTCTGGGTAAAGGGCTCCTCCTCTCCTGGGGGTCAGGCGTaGAGGCTGGGACAGTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: CQGHEGAAQIFWVKGSSSPGGQA*RLGQCS Trigger: AGAACACTGTCCCAGCCTCCACGCCTGACCCCCAGG...AGAGGAGGAGCCCTTTACCCAGAAGATCTGAGCAGCACCCTCGTGCCCCTGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR CCA 90 bp | GTGCCCACCCTGTCAGCAACTCTGTCAGGACTTCCTGTCAGCCCTGCATGCCCTCGCAGTTTCTCCTCCTaGGGGTCAGGCGTGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VPTLSATLSGLPVSPACPRSFSS*GSGVEA Trigger: AGCCTCCACGCCTGACCCCCAGGAGGAGAAACTGCG...AGGGCATGCAGGGCTGACAGGAAGTCCTGACAGAGTTGCTGACAGGGTGGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR TCA 90 bp | AGCCCCATGCAACTTGGTGGGGTGATGGCTCAGGGAACTGCGAGCTGTAGAGCTGGAGCTCTGCTTCCGTaGGGGCCTCTGTCCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SPMQLGGVMAQGTASCRAGALLP*GPLSSA Trigger: AGCAGAGGACAGAGGCCCTCACGGAAGCAGAGCTCC...AGCTCTACAGCTCGCAGTTCCCTGAGCCATCACCCCACCAAGTTGCATGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR CCA 90 bp | GCAACTCTGTCAGGACTTCCTGTCAGCCCTGCATGCCCTCCTAGACACCATCCTGGAGAATGGGGTCCTTaGGACCGCTGGGCTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ATLSGLPVSPACPPRHHPGEWGP*DRWAPS Trigger: GCTGGGAGCCCAGCGGTCCCAAGGACCCCATTCTCC...AGGATGGTGTCTAGGAGGGCATGCAGGGCTGACAGGAAGTCCTGACAGAGTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR TCA 90 bp | TATCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTATGTGCCTGCAGATGCTaGGGTCCTGGGTGTGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: YLGLWRPAWLATAIPGLVCACRC*GPGCGS Trigger: CGAGCCACACCCAGGACCTCAGCATCTGCAGGCACA...TACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR TCA 90 bp | GTGCCCACCCTGTCAGCAACTCTGTCAGGACTTCCTGTCAGCCCTGCATGCCCTTGTTGTCCTCGATGGTaGCACTGTCAGCGTGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VPTLSATLSGLPVSPACPCCPRW*HCQRGP Trigger: GGGACCACGCTGACAGTGTCACCATCGAGGACAACA...AGGGCATGCAGGGCTGACAGGAAGTCCTGACAGAGTTGCTGACAGGGTGGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR GCA 90 bp | TTATCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTGCCGGGGAGTTTACCTaGAGGCTGGTGGCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSRTLEACLACHGHSWACAGEFT*RLVASS Trigger: AGAGGAGGCCACCAGCCTGCAGGTAAACTCCCCGGC...ACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR CCA 90 bp | TGCCAGGGGCACGAGGGTGCTGCTCAGATCTTCTGGGTAAAGGGCTCCTCCTCTGACGGTGGCAGAACCTaGCTCCTTGCTGCTCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CQGHEGAAQIFWVKGSSSDGGRT*LLAAQV Trigger: CACTTGAGCAGCAAGGAGCCAGGTTCTGCCACCGTC...AGAGGAGGAGCCCTTTACCCAGAAGATCTGAGCAGCACCCTCGTGCCCCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR CCA 90 bp | GCTGCTTCCTGGGGAGTCTTTCCATCGAATGTGAGGTCACGAGTGAGGGAGGGGGAGAGAAGCTGTGCCTaGTCCTGCTGGGGAAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: AASWGVFPSNVRSRVREGERSCA*SCWGNG Trigger: GCCGTTTCCCCAGCAGGACCAGGCACAGCTTCTCTC...CCCCTCCCTCACTCGTGACCTCACATTCGATGGAAAGACTCCCCAGGAAGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR CCA 90 bp | TATCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTAGGCTCTTGGCTTTGCTaGTTGGGGCAGGGGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YLGLWRPAWLATAIPGLVGSWLC*LGQGEG Trigger: TCCCTCCCCCTGCCCCAACCAGCAAAGCCAAGAGCC...TACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR CCA 90 bp | TTATCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTCTTGCACCAGGACCCTaGAGCCACTGGGCTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRTLEACLACHGHSWACLAPGP*SHWALG Trigger: GCCAAGAGCCCAGTGGCTCCAGGGTCCTGGTGCAAG...ACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR TCA 90 bp | TGCCAGGGGCACGAGGGTGCTGCTCAGATCTTCTGGGTAAAGGGCTCCTCCTCTACAGGGTCCTTGGGATaGTGCCTCTGTCACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: CQGHEGAAQIFWVKGSSSTGSLG*CLCHCS Trigger: GCTACAGTGACAGAGGCATCATCCCAAGGACCCTGT...AGAGGAGGAGCCCTTTACCCAGAAGATCTGAGCAGCACCCTCGTGCCCCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR GCA 90 bp | GTTCAGCTGCCTAAAGTTTGGATCGCATGCCAGGGGCACGAGGGTGCTGCTCAGCTCCTCCTCCAGCTGTaGTCGCAGTTTCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VQLPKVWIACQGHEGAAQLLLQL*SQFLLL Trigger: CAGGAGGAGAAACTGCGAGCACAGCTGGAGGAGGAG...CTGAGCAGCACCCTCGTGCCCCTGGCATGCGATCCAAACTTTAGGCAGCTGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR GCA 90 bp | TGCCAGGGGCACGAGGGTGCTGCTCAGATCTTCTGGGTAAAGGGCTCCTCCTCTAGGCCGTTTTGTACCTaGCCTTCTCCTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CQGHEGAAQIFWVKGSSSRPFCT*PSPPPA Trigger: AGCTGGAGGAGGAGAAGGGCAGGTACAAAACGGCCT...AGAGGAGGAGCCCTTTACCCAGAAGATCTGAGCAGCACCCTCGTGCCCCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGGTTCTCCAAAACCTGTCAGTGAGTCCTGGCTGGCCTCCAGCTTCTTGCTGAGGTCCTGGGTGTaGCTCGGGGCTGAGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LQGSPKPVSESWLASSFLLRSWV*LGAEEN Trigger: ATTCTCCTCAGCCCCGAGCCACACCCAGGACCTCAG...CAAGAAGCTGGAGGCCAGCCAGGACTCACTGACAGGTTTTGGAGAACCCTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CCA 90 bp | TTATCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTGAGCCACTGGGCTCTTaGCTTTGCTGGTTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSRTLEACLACHGHSWACEPLGS*LCWLGQ Trigger: CTGCCCCAACCAGCAAAGCCAAGAGCCCAGTGGCTC...ACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR GCA 90 bp | AGCCCCATGCAACTTGGTGGGGTGATGGCTCAGGGAACTGCGAGCTGTAGAGCTTTGCCACTGCCCGTCTaGCCATATGCGAAGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPMQLGGVMAQGTASCRALPLPV*PYAKMV Trigger: CACCATCTTCGCATATGGGCAGACGGGCAGTGGCAA...AGCTCTACAGCTCGCAGTTCCCTGAGCCATCACCCCACCAAGTTGCATGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR GCA 90 bp | GTTCAGCTGCCTAAAGTTTGGATCGCATGCCAGGGGCACGAGGGTGCTGCTCAGCTTGGAGAGAAGCTGTaGCTGGTCCTGCTGGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VQLPKVWIACQGHEGAAQLGEKL*LVLLGK Trigger: TTTCCCCAGCAGGACCAGGCACAGCTTCTCTCCAAG...CTGAGCAGCACCCTCGTGCCCCTGGCATGCGATCCAAACTTTAGGCAGCTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR CCA 90 bp | AGCCCCATGCAACTTGGTGGGGTGATGGCTCAGGGAACTGCGAGCTGTAGAGCTGCCAGGTCAACCAGATaGAGCTTAGCATGTCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SPMQLGGVMAQGTASCRAARSTR*SLACRT Trigger: CGTCCGACATGCTAAGCTCCATCTGGTTGACCTGGC...AGCTCTACAGCTCGCAGTTCCCTGAGCCATCACCCCACCAAGTTGCATGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR CCA 90 bp | GTAAAGGGCTCCTCCTCTGGCCTCAGATTTGCCAGCTGCTTCCTGGGGAGTCTTTCCTCTGCTCTCCTGTaGCCATGGCCAACTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VKGSSSGLRFASCFLGSLSSALL*PWPTLP Trigger: AGGCAGAGTTGGCCATGGCCACAGGAGAGCAGAGGA...AAGACTCCCCAGGAAGCAGCTGGCAAATCTGAGGCCAGAGGAGGAGCCCTTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR CCA 90 bp | TATCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTACATCCTGGAGGTTCGTaGCCGGGGAGTTTACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YLGLWRPAWLATAIPGLVHPGGS*PGSLPA Trigger: TGCAGGTAAACTCCCCGGCCACGAACCTCCAGGATG...TACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR CCA 90 bp | TATCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTATGTGCCTGGTCCTGCTaGGGAAACGGCTTCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YLGLWRPAWLATAIPGLVCAWSC*GNGFTA Trigger: TGCTGTGAAGCCGTTTCCCCAGCAGGACCAGGCACA...TACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR TCA 90 bp | GGGCAGGTTCTTCATCTTCTCAGTAGCCATTCTGTCTGCAGGGCAGGGTTGGACCTCCCAGACTGTCTCTaGGCACGCTGGTCATCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GQVLHLLSSHSVCRAGLDLPDCL*ARWSSW Trigger: CCATGATGACCAGCGTGCTCAGAGACAGTCTGGGAG...GTCCAACCCTGCCCTGCAGACAGAATGGCTACTGAGAAGATGAAGAACCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR TCA 90 bp | GTGCACTGCACCATCTCCAGGGTTCTCCAAAACCTGTCAGTGAGTCCTGGCTGGGTAGGTGCCGCTGGTTaGTGGCATCTTTCAGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VHCTISRVLQNLSVSPGWVGAAG*WHLSAD Trigger: GTCAGCTGAAAGATGCCATCAACCAGCGGCACCTAC...CCAGCCAGGACTCACTGACAGGTTTTGGAGAACCCTGGAGATGGTGCAGTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR TCA 90 bp | GTAAAGGGCTCCTCCTCTGGCCTCAGATTTGCCAGCTGCTTCCTGGGGAGTCTTTCTGGCTGTCTCCAGTaGGAGGGATGGATGATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VKGSSSGLRFASCFLGSLSGCLQ*EGWMIG Trigger: CCCTATCATCCATCCCTCTCACTGGAGACAGCCAGA...AAGACTCCCCAGGAAGCAGCTGGCAAATCTGAGGCCAGAGGAGGAGCCCTTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR GCA 90 bp | CTTGGTAGTGCCCACCCTGTCAGCAACTCTGTCAGGACTTCCTGTCAGCCCTGCGCCCGTCTGCCCATATaGGAAGATGGTGCCATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGSAHPVSNSVRTSCQPCARLPI*EDGAIV Trigger: TACAATGGCACCATCTTCGCATATGGGCAGACGGGC...GCAGGGCTGACAGGAAGTCCTGACAGAGTTGCTGACAGGGTGGGCACTACCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR GCA 90 bp | GTACATAGCTCCCTGAAGACGGGGCAAGTGGGTGATGGTTTGGGCTGGTACGGTAGCAAGCTGGATCTGTaGCTGCAGATGCTGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VHSSLKTGQVGDGLGWYGSKLDL*LQMLRS Trigger: GGACCTCAGCATCTGCAGGCACAGATCCAGCTTGCT...ACCGTACCAGCCCAAACCATCACCCACTTGCCCCGTCTTCAGGGAGCTATGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR GCA 90 bp | GCTGCTTCCTGGGGAGTCTTTCCATCGAATGTGAGGTCACGAGTGAGGGAGGGGATGAGCAGCTGCAGGTaGTCTATCTCCACCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AASWGVFPSNVRSRVREGMSSCR*SISTFR Trigger: CCTGAAGGTGGAGATAGAGCACCTGCAGCTGCTCAT...CCCCTCCCTCACTCGTGACCTCACATTCGATGGAAAGACTCCCCAGGAAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR CCA 90 bp | GTTCAGCTGCCTAAAGTTTGGATCGCATGCCAGGGGCACGAGGGTGCTGCTCAGGTACGACAGGGTCCTTaGGATGATGCCTCTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: VQLPKVWIACQGHEGAAQVRQGP*DDASVT Trigger: AGTGACAGAGGCATCATCCCAAGGACCCTGTCGTAC...CTGAGCAGCACCCTCGTGCCCCTGGCATGCGATCCAAACTTTAGGCAGCTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR CCA 90 bp | GCTGCTTCCTGGGGAGTCTTTCCATCGAATGTGAGGTCACGAGTGAGGGAGGGGCAGCGATCATCCTGTTaGTGTCCCCCAAGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AASWGVFPSNVRSRVREGQRSSC*CPPRRA Trigger: TGCTCTTCTTGGGGGACACCAACAGGATGATCGCTG...CCCCTCCCTCACTCGTGACCTCACATTCGATGGAAAGACTCCCCAGGAAGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR CCA 90 bp | AGCCCCATGCAACTTGGTGGGGTGATGGCTCAGGGAACTGCGAGCTGTAGAGCTGGGTTGCAATCATGGTaGTCATGCAGTTCCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPMQLGGVMAQGTASCRAGLQSW*SCSSLP Trigger: TGGGAGGGAACTGCATGACCACCATGATTGCAACCC...AGCTCTACAGCTCGCAGTTCCCTGAGCCATCACCCCACCAAGTTGCATGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| 3UTR CAA 72 bp | CTTTTGTGTCCACTTAGCCCAAGACACTGGGCCAGGTaGCCAGATGCCGGGAGGGTCACTGAGGCAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLCPLSPRHWAR*PDAGRVTEARS Trigger: TGATCTTGCCTCAGTGACCCTCCCGGCATCTGGCAACCTGGCCCAGTGTCTTGGGCTAAGTGGACACAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR TCA 90 bp | TATCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTAGACCGGGTTGAAGCTTaGTTCATAGGAGTCTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: YLGLWRPAWLATAIPGLVDRVEA*FIGVSA Trigger: CGCTGAGACTCCTATGAATCAAGCTTCAACCCGGTC...TACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR TCA 90 bp | GGGCAGGTTCTTCATCTTCTCAGTAGCCATTCTGTCTGCAGGGCAGGGTTGGACATTAGGGCCACTCGCTaGGCAAATCTGCAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQVLHLLSSHSVCRAGLDIRATR*ANLQVE Trigger: CTCCACCTGCAGATTTGCTCAGCGAGTGGCCCTAAT...GTCCAACCCTGCCCTGCAGACAGAATGGCTACTGAGAAGATGAAGAACCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR TCA 90 bp | GCAACTCTGTCAGGACTTCCTGTCAGCCCTGCATGCCCTCCTAGACACCATCCTCGTTGTCCCTCTGCTTaGGAAGACCTAGGAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ATLSGLPVSPACPPRHHPRCPSA*EDLGAL Trigger: CAAAGCTCCTAGGTCTTCTCAAGCAGAGGGACAACG...AGGATGGTGTCTAGGAGGGCATGCAGGGCTGACAGGAAGTCCTGACAGAGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR GCA 90 bp | GTGCCCACCCTGTCAGCAACTCTGTCAGGACTTCCTGTCAGCCCTGCATGCCCTCATATGCGAAGATGGTaGCATTGTAACCTGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPTLSATLSGLPVSPACPHMRRW*HCNLPR Trigger: CCTTGGCAGGTTACAATGGCACCATCTTCGCATATG...AGGGCATGCAGGGCTGACAGGAAGTCCTGACAGAGTTGCTGACAGGGTGGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR GCA 90 bp | TCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTAAGCAATCATGGTGGTCATaGAGTTCCCTCCCAGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRTLEACLACHGHSWACKQSWWS*SSLPDC Trigger: ACAGTCTGGGAGGGAACTGCATGACCACCATGATTG...CTTACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR GCA 90 bp | TATCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTAGCTACTTGCTGTAGGTaGCGCTGGTTGATGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: YLGLWRPAWLATAIPGLVATCCR*RWLMAS Trigger: AGATGCCATCAACCAGCGGCACCTACAGCAAGTAGC...TACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR GCA 90 bp | AGCCCCATGCAACTTGGTGGGGTGATGGCTCAGGGAACTGCGAGCTGTAGAGCTATTCCAAGAGCTACTTaGTGTAGGTGCCGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPMQLGGVMAQGTASCRAIPRAT*CRCRWL Trigger: CAACCAGCGGCACCTACAGCAAGTAGCTCTTGGAAT...AGCTCTACAGCTCGCAGTTCCCTGAGCCATCACCCCACCAAGTTGCATGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR GCA 90 bp | GTACATAGCTCCCTGAAGACGGGGCAAGTGGGTGATGGTTTGGGCTGGTACGGTTTGTCCATGAGCAGCTaGAGGTGCTCTATCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VHSSLKTGQVGDGLGWYGLSMSS*RCSIST Trigger: GGTGGAGATAGAGCACCTGCAGCTGCTCATGGACAA...ACCGTACCAGCCCAAACCATCACCCACTTGCCCCGTCTTCAGGGAGCTATGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR CCA 90 bp | GTAAAGGGCTCCTCCTCTGGCCTCAGATTTGCCAGCTGCTTCCTGGGGAGTCTTTGCTGTAGGTGCCGCTaGTTGATGGCATCTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKGSSSGLRFASCFLGSLCCRCR*LMASFS Trigger: GCTGAAAGATGCCATCAACCAGCGGCACCTACAGCA...AAGACTCCCCAGGAAGCAGCTGGCAAATCTGAGGCCAGAGGAGGAGCCCTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTAAGTTCAGGGCCTTCAGGTaGATAAAGGCCGTTTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SRTLEACLACHGHSWACKFRAFR*IKAVLY Trigger: GTACAAAACGGCCTTTATGCACCTGAAGGCCCTGAA...CTTACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR GCA 90 bp | TTATCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTGCCTCGAACTCTTTCTaGAGCTTGACCTTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSRTLEACLACHGHSWACASNSF*SLTLAL Trigger: CAAAGCCAAGGTCAAGCTGCAGAAAGAGTTCGAGGC...ACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGGTTCTCCAAAACCTGTCAGTGAGTCCTGGCTGGCCTCCAGCTTCTTGGCCCATATGCGAAGATaGTGCCATTGTAACCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQGSPKPVSESWLASSFLAHMRR*CHCNLP Trigger: TGGCAGGTTACAATGGCACCATCTTCGCATATGGGC...CAAGAAGCTGGAGGCCAGCCAGGACTCACTGACAGGTTTTGGAGAACCCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGGTTCTCCAAAACCTGTCAGTGAGTCCTGGCTGGCCTCCAGCTTCTTGACAGGGTTGCAATCATaGTGGTCATGCAGTTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQGSPKPVSESWLASSFLTGLQS*WSCSSL Trigger: GAGGGAACTGCATGACCACCATGATTGCAACCCTGT...CAAGAAGCTGGAGGCCAGCCAGGACTCACTGACAGGTTTTGGAGAACCCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR CCA 90 bp | TATCATCCTCCTGCATTGCACTGCCTGGAATGTCCCCACCTGTGTATCATGATGGGACCCTGGAGCCACTaGGCTCTTGGCTTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YHPPALHCLECPHLCIMMGPWSH*ALGFAG Trigger: ACCAGCAAAGCCAAGAGCCCAGTGGCTCCAGGGTCC...CATCATGATACACAGGTGGGGACATTCCAGGCAGTGCAATGCAGGAGGATGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS-3UTR GCA 90 bp | GCTGCTTCCTGGGGAGTCTTTCCATCGAATGTGAGGTCACGAGTGAGGGAGGGGGTGTCGTGTAGATCTTaGTGCTGTCCTTTTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: AASWGVFPSNVRSRVREGVSCRS*CCPFAT Trigger: AGTTGCAAAAGGACAGCAGCAAGATCTACACGACAC...CCCCTCCCTCACTCGTGACCTCACATTCGATGGAAAGACTCCCCAGGAAGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR GCA 90 bp | GTAAAGGGCTCCTCCTCTGGCCTCAGATTTGCCAGCTGCTTCCTGGGGAGTCTTCTCCAAAGACAGGGTTaGAATCATGGTGGTCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: VKGSSSGLRFASCFLGSLLQRQG*NHGGHA Trigger: TGCATGACCACCATGATTGCAACCCTGTCTTTGGAG...AAGACTCCCCAGGAAGCAGCTGGCAAATCTGAGGCCAGAGGAGGAGCCCTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CCA 90 bp | GTTCAGCTGCCTAAAGTTTGGATCGCATGCCAGGGGCACGAGGGTGCTGCTCAGTTCTTCATCTCTCAATaGTTCTTGGCATGCTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VQLPKVWIACQGHEGAAQFFISQ*FLACLP Trigger: CGGCAAGCATGCCAAGAACCATTGAGAGATGAAGAA...CTGAGCAGCACCCTCGTGCCCCTGGCATGCGATCCAAACTTTAGGCAGCTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR TCA 90 bp | TTATCAATAAATAATGGGCTATCATCCTCCTGCATTGCACTGCCTGGAATGTCCGGTGTGGCTCGGGGCTaGGGAGAATGGGGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSINNGLSSSCIALPGMSGVARG*GEWGPW Trigger: CCAAGGACCCCATTCTCCTCAGCCCCGAGCCACACC...GGACATTCCAGGCAGTGCAATGCAGGAGGATGATAGCCCATTATTTATTGATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCTCTGAGTAGCTTCCCACTGCTTTCTGGTACTGTGAGGTCCTCAGACTGCCAGCGTGGTCCCTCTTaGAAATCTCAAAAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RALSSFPLLSGTVRSSDCQRGPS*KSQKPP Trigger: AGGAGGCTTTTGAGATTTTCAAGAGGGACCACGCTG...GCAGTCTGAGGACCTCACAGTACCAGAAAGCAGTGGGAAGCTACTCAGAGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR GCA 90 bp | TTATCAATAAATAATGGGCTATCATCCTCCTGCATTGCACTGCCTGGAATGTCCGCTGGTGGCCTCCTCTaGCCACCAGGCCTCGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LSINNGLSSSCIALPGMSAGGLL*PPGLEL Trigger: GAGTTCGAGGCCTGGTGGGCAGAGGAGGCCACCAGC...GGACATTCCAGGCAGTGCAATGCAGGAGGATGATAGCCCATTATTTATTGATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTCCTGGGGAGTCTTTCCATCGAATGTGAGGTCACGAGTGAGGGAGGGGGCTTCAGAAAATCTCTaGTTCAGAACCTGTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AASWGVFPSNVRSRVREGASENL*FRTCLL Trigger: CAACAAACAGGTTCTGAAGCAGAGATTTTCTGAAGC...CCCCTCCCTCACTCGTGACCTCACATTCGATGGAAAGACTCCCCAGGAAGCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCCACCCTGTCAGCAACTCTGTCAGGACTTCCTGTCAGCCCTGCATGCCCTTTTCATCTTCATCTATaGAGTAAATCCCTTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPTLSATLSGLPVSPACPFHLHL*SKSLAA Trigger: AGCAGCAAGGGATTTACTCCATAGATGAAGATGAAA...AGGGCATGCAGGGCTGACAGGAAGTCCTGACAGAGTTGCTGACAGGGTGGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR TCA 90 bp | TATCATCCTCCTGCATTGCACTGCCTGGAATGTCCCCACCTGTGTATCATGATGTGCTCAAGTGCACAGTaGAAATACAGTGTGACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YHPPALHCLECPHLCIMMCSSAQ*KYSVTG Trigger: CCCGGTCACACTGTATTTTCACTGTGCACTTGAGCA...CATCATGATACACAGGTGGGGACATTCCAGGCAGTGCAATGCAGGAGGATGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR TCA 90 bp | TTATCAATAAATAATGGGCTATCATCCTCCTGCATTGCACTGCCTGGAATGTCCCTCCTGGCGTCCCAGTaGCATCTCCTCTCTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSINNGLSSSCIALPGMSLLASQ*HLLSHP Trigger: GGGATGAGAGAGGAGATGTCACTGGGACGCCAGGAG...GGACATTCCAGGCAGTGCAATGCAGGAGGATGATAGCCCATTATTTATTGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR GCA 90 bp | GCAACTCTGTCAGGACTTCCTGTCAGCCCTGCATGCCCTCCTAGACACCATCCTTTGCTGCTGTCCTTTTaGAACTGCTCAAAAATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ATLSGLPVSPACPPRHHPLLLSF*NCSKMY Trigger: GTACATTTTTGAGCAGTTGCAAAAGGACAGCAGCAA...AGGATGGTGTCTAGGAGGGCATGCAGGGCTGACAGGAAGTCCTGACAGAGTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR GCA 90 bp | TATCATCCTCCTGCATTGCACTGCCTGGAATGTCCCCACCTGTGTATCATGATGGGCCATGGCCAACTCTaGCTTCAAGTCTTCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: YHPPALHCLECPHLCIMMGHGQL*LQVFNL Trigger: GAGATTGAAGACTTGAAGGCAGAGTTGGCCATGGCC...CATCATGATACACAGGTGGGGACATTCCAGGCAGTGCAATGCAGGAGGATGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGAGCTCTGAGTAGCTTCCCACTGCTTTCTGGTACTGTGAGGTCCTCAGACGTGACACTGTCAGCGTaGTCCCTCTTGAAAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CRALSSFPLLSGTVRSSDVTLSA*SLLKIS Trigger: TGAGATTTTCAAGAGGGACCACGCTGACAGTGTCAC...GTCTGAGGACCTCACAGTACCAGAAAGCAGTGGGAAGCTACTCAGAGCTCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR GCA 90 bp | TATCATCCTCCTGCATTGCACTGCCTGGAATGTCCCCACCTGTGTATCATGATGTTCCTCCTCAGTTGTTaGCTGATGCAGAGACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YHPPALHCLECPHLCIMMFLLSC*LMQRQV Trigger: AACCTGTCTCTGCATCAGGCAACAACTGAGGAGGAA...CATCATGATACACAGGTGGGGACATTCCAGGCAGTGCAATGCAGGAGGATGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR GCA 90 bp | TTATCAATAAATAATGGGCTATCATCCTCCTGCATTGCACTGCCTGGAATGTCCAGCTGTGCCTGGTCCTaGTGGGGAAACGGCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSINNGLSSSCIALPGMSSCAWS*WGNGFT Trigger: TGTGAAGCCGTTTCCCCAGCAGGACCAGGCACAGCT...GGACATTCCAGGCAGTGCAATGCAGGAGGATGATAGCCCATTATTTATTGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGAGCTCTGAGTAGCTTCCCACTGCTTTCTGGTACTGTGAGGTCCTCAGACCTGTCCTTTTGCAACTaGTCAAAAATGTACGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: CRALSSFPLLSGTVRSSDLSFCN*SKMYDR Trigger: CCTGTCGTACATTTTTGAGCAGTTGCAAAAGGACAG...GTCTGAGGACCTCACAGTACCAGAAAGCAGTGGGAAGCTACTCAGAGCTCTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR GCA 90 bp | TATCATCCTCCTGCATTGCACTGCCTGGAATGTCCCCACCTGTGTATCATGATGTCCTTGCTGCTCAAGTaGACAGTGAAAATACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YHPPALHCLECPHLCIMMSLLLK*TVKIQC Trigger: ACACTGTATTTTCACTGTGCACTTGAGCAGCAAGGA...CATCATGATACACAGGTGGGGACATTCCAGGCAGTGCAATGCAGGAGGATGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGAGCTCTGAGTAGCTTCCCACTGCTTTCTGGTACTGTGAGGTCCTCAGACTTCTCCCAGAGCTTTTaGTTCAGAAAATCTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CRALSSFPLLSGTVRSSDFSQSF*FRKSLL Trigger: AAGCAGAGATTTTCTGAAGCAAAAGCTCTGGGAGAA...GTCTGAGGACCTCACAGTACCAGAAAGCAGTGGGAAGCTACTCAGAGCTCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CCA 90 bp | TTATCAATAAATAATGGGCTATCATCCTCCTGCATTGCACTGCCTGGAATGTCCGCACGCTGGTCATCATaGAGTTCCTGTAAGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSINNGLSSSCIALPGMSARWSS*SSCKGC Trigger: ACATCCCTTACAGGAACTCCATGATGACCAGCGTGC...GGACATTCCAGGCAGTGCAATGCAGGAGGATGATAGCCCATTATTTATTGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTCGTGTCTGGGATCCAGCAGGTCATAGCCACATTCGTTGTAGATTTCCAATTTCATCTTCATCTATaGAGTAAATCCCTTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GFVSGIQQVIATFVVDFQFHLHL*SKSLAA Trigger: AGCAGCAAGGGATTTACTCCATAGATGAAGATGAAA...TTGGAAATCTACAACGAATGTGGCTATGACCTGCTGGATCCCAGACACGAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
||
| CDS CCA 90 bp | CCTGGTCCTGCTGGGGAAACGGCTTCACAGCATCCTGGAGGTTCGTaGCCGGGGAGTTTACCTGCAGGCTGGTGGCCTCCTCTGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PGPAGETASQHPGGS*PGSLPAGWWPPLPT Trigger: GGTGGGCAGAGGAGGCCACCAGCCTGCAGGTAAACTCCCCGGCCACGAACCTCCAGGATGCTGTGAAGCCGTTTCCCCAGCAGGACCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS TCA 90 bp | GGATCTGTGCCTGCAGATGCTGAGGTCCTGGGTGTGGCTCGGGGCTaGGGAGAATGGGGTCCTTGGGACCGCTGGGCTCCCAGCGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSVPADAEVLGVARG*GEWGPWDRWAPSDE Trigger: TTCATCGCTGGGAGCCCAGCGGTCCCAAGGACCCCATTCTCCTCAGCCCCGAGCCACACCCAGGACCTCAGCATCTGCAGGCACAGATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CCA 90 bp | TGGAGCAAGCTGGATCTGTGCCTGCAGATGCTGAGGTCCTGGGTGTaGCTCGGGGCTGAGGAGAATGGGGTCCTTGGGACCGCTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WSKLDLCLQMLRSWV*LGAEENGVLGTAGL Trigger: GAGCCCAGCGGTCCCAAGGACCCCATTCTCCTCAGCCCCGAGCCACACCCAGGACCTCAGCATCTGCAGGCACAGATCCAGCTTGCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS TCA 90 bp | GGGCTGAGGAGAATGGGGTCCTTGGGACCGCTGGGCTCCCAGCGATaGAGGGCGAGTTCTGAGGTGGCCTGGTATCGCTTTTCTCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLRRMGSLGPLGSQR*RASSEVAWYRFSLG Trigger: GCCTAGAGAAAAGCGATACCAGGCCACCTCAGAACTCGCCCTTCATCGCTGGGAGCCCAGCGGTCCCAAGGACCCCATTCTCCTCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CCA 90 bp | TCACAGCATCCTGGAGGTTCGTGGCCGGGGAGTTTACCTGCAGGCTaGTGGCCTCCTCTGCCCACCAGGCCTCGAACTCTTTCTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQHPGGSWPGSLPAG*WPPLPTRPRTLSAA Trigger: AGCTGCAGAAAGAGTTCGAGGCCTGGTGGGCAGAGGAGGCCACCAGCCTGCAGGTAAACTCCCCGGCCACGAACCTCCAGGATGCTGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS GCA 90 bp | GTGCATAAAGGCCGTTTTGTACCTGCCCTTCTCCTCCTCCAGCTGTaGTCGCAGTTTCTCCTCCTGGGGGTCAGGCGTGGAGGCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VHKGRFVPALLLLQL*SQFLLLGVRRGGWD Trigger: GTCCCAGCCTCCACGCCTGACCCCCAGGAGGAGAAACTGCGAGCACAGCTGGAGGAGGAGAAGGGCAGGTACAAAACGGCCTTTATGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS GCA 90 bp | GAGGTTCGTGGCCGGGGAGTTTACCTGCAGGCTGGTGGCCTCCTCTaGCCACCAGGCCTCGAACTCTTTCTGCAGCTTGACCTTGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EVRGRGVYLQAGGLL*PPGLELFLQLDLGF Trigger: AAAGCCAAGGTCAAGCTGCAGAAAGAGTTCGAGGCCTGGTGGGCAGAGGAGGCCACCAGCCTGCAGGTAAACTCCCCGGCCACGAACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | TATCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTAAGGAGAATGGGGTCCTaGGGACCGCTGGGCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YLGLWRPAWLATAIPGLVRRMGS*GPLGSQ Trigger: CTGGGAGCCCAGCGGTCCCAAGGACCCCATTCTCCT...TACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCTTCCTGGGGAGTCTTTCCATCGAATGTGAGGTCACGAGTGAGGGAGGGGGGAGCCACTGGGCTCTaGGCTTTGCTGGTTGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AASWGVFPSNVRSRVREGGATGL*ALLVGA Trigger: TGCCCCAACCAGCAAAGCCAAGAGCCCAGTGGCTCC...CCCCTCCCTCACTCGTGACCTCACATTCGATGGAAAGACTCCCCAGGAAGCAGC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS TCA 90 bp | CTCTGTCAGAAGCAGGCCCCCGACTCCAGTCTTCGAGACACGCTCTaGCCCTGCCAGGTCAACCAGATGGAGCTTAGCATGTCGGACGGT | + |
|
Preference number: 5 (lower is better) Translates to: LCQKQAPDSSLRDTL*PCQVNQMELSMSDG Trigger: ACCGTCCGACATGCTAAGCTCCATCTGGTTGACCTGGCAGGGTCAGAGCGTGTCTCGAAGACTGGAGTCGGGGGCCTGCTTCTGACAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS TCA 90 bp | GGGGTCCTTGGGACCGCTGGGCTCCCAGCGATGAAGGGCGAGTTCTaGGGTGGCCTGGTATCGCTTTTCTCTAGGCTTGAATTCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVLGTAGLPAMKGEF*GGLVSLFSRLEFWR Trigger: CCTCCAGAATTCAAGCCTAGAGAAAAGCGATACCAGGCCACCTCAGAACTCGCCCTTCATCGCTGGGAGCCCAGCGGTCCCAAGGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CCA 90 bp | CTTGCACCAGGACCCTGGAGCCACTGGGCTCTTGGCTTTGCTGGTTaGGGCAGGGGGAGGGAAGGATTCTTCTGGCATTCCTATCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LAPGPWSHWALGFAG*GRGREGFFWHSYRR Trigger: TCTGCGATAGGAATGCCAGAAGAATCCTTCCCTCCCCCTGCCCCAACCAGCAAAGCCAAGAGCCCAGTGGCTCCAGGGTCCTGGTGCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS GCA 90 bp | GTCTGGCTGTCTCCAGTGAGAGGGATGGATGATAGGGGCCTATCTTaGACCAGGACCCTGGAGCCACTGGGCTCTTGGCTTTGCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VWLSPVRGMDDRGLS*TRTLEPLGSWLCWL Trigger: CAACCAGCAAAGCCAAGAGCCCAGTGGCTCCAGGGTCCTGGTGCAAGATAGGCCCCTATCATCCATCCCTCTCACTGGAGACAGCCAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CCA 90 bp | CTATCTTGCACCAGGACCCTGGAGCCACTGGGCTCTTGGCTTTGCTaGTTGGGGCAGGGGGAGGGAAGGATTCTTCTGGCATTCCTATCG | + |
|
Preference number: 5 (lower is better) Translates to: LSCTRTLEPLGSWLC*LGQGEGRILLAFLS Trigger: CGATAGGAATGCCAGAAGAATCCTTCCCTCCCCCTGCCCCAACCAGCAAAGCCAAGAGCCCAGTGGCTCCAGGGTCCTGGTGCAAGATAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGGGCACGAGGGTGCTGCTCAGATCTTCTGGGTAAAGGGCTCCTCCTCTTCAGCGATCATCCTGTaGGTGTCCCCCAAGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CQGHEGAAQIFWVKGSSSSAIIL*VSPKKS Trigger: GCTCTTCTTGGGGGACACCAACAGGATGATCGCTGA...AGAGGAGGAGCCCTTTACCCAGAAGATCTGAGCAGCACCCTCGTGCCCCTGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGTTCTTCATCTTCTCAGTAGCCATTCTGTCTGCAGGGCAGGGTTGGACACTGGGCTCTTGGCTTaGCTGGTTGGGGCAGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GQVLHLLSSHSVCRAGLDTGLLA*LVGAGG Trigger: TCCCCCTGCCCCAACCAGCAAAGCCAAGAGCCCAGT...GTCCAACCCTGCCCTGCAGACAGAATGGCTACTGAGAAGATGAAGAACCTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | GCAACTCTGTCAGGACTTCCTGTCAGCCCTGCATGCCCTCCTAGACACCATCCTGGCAGATCTTCCAGTTaGGAGGCTTCGTGTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ATLSGLPVSPACPPRHHPGRSSS*EASCLG Trigger: TCCCAGACACGAAGCCTCCAAACTGGAAGATCTGCC...AGGATGGTGTCTAGGAGGGCATGCAGGGCTGACAGGAAGTCCTGACAGAGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGGGCACGAGGGTGCTGCTCAGATCTTCTGGGTAAAGGGCTCCTCCTCTTCGTTGTCCCTCTGCTaGAGAAGACCTAGGAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CQGHEGAAQIFWVKGSSSSLSLC*RRPRSF Trigger: AAAGCTCCTAGGTCTTCTCAAGCAGAGGGACAACGA...AGAGGAGGAGCCCTTTACCCAGAAGATCTGAGCAGCACCCTCGTGCCCCTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGTAGTGCCCACCCTGTCAGCAACTCTGTCAGGACTTCCTGTCAGCCCTGCTTCTGCAGCTTGACCTaGGCTTTGTCCATGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGSAHPVSNSVRTSCQPCFCSLT*ALSMSS Trigger: GCTGCTCATGGACAAAGCCAAGGTCAAGCTGCAGAA...GCAGGGCTGACAGGAAGTCCTGACAGAGTTGCTGACAGGGTGGGCACTACCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS GCA 90 bp | ATGAGCAGCTGCAGGTGCTCTATCTCCACCTTCAGGGCCTTCAGGTaGATAAAGGCCGTTTTGTACCTGCCCTTCTCCTCCTCCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: MSSCRCSISTFRAFR*IKAVLYLPFSSSSC Trigger: ACAGCTGGAGGAGGAGAAGGGCAGGTACAAAACGGCCTTTATGCACCTGAAGGCCCTGAAGGTGGAGATAGAGCACCTGCAGCTGCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | TTATCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTCTTCCTCCTCAGTTGTaGCCTGATGCAGAGACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSRTLEACLACHGHSWACLPPQL*PDAETG Trigger: ACCTGTCTCTGCATCAGGCAACAACTGAGGAGGAAG...ACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGTAGTGCCCACCCTGTCAGCAACTCTGTCAGGACTTCCTGTCAGCCCTGCCGCTTTTCTCTAGGCTaGAATTCTGGAGGGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGSAHPVSNSVRTSCQPCRFSLG*NSGGHP Trigger: AGGATGCCCTCCAGAATTCAAGCCTAGAGAAAAGCG...GCAGGGCTGACAGGAAGTCCTGACAGAGTTGCTGACAGGGTGGGCACTACCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | TCTAGGACTTTGGAGGCCTGCCTGGCTTGCCACGGCCATTCCTGGGCTTGTAAGTCAGCGTGGTCCCTCTaGAAAATCTCAAAAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRTLEACLACHGHSWACKSAWSL*KISKAS Trigger: GGAGGCTTTTGAGATTTTCAAGAGGGACCACGCTGA...CTTACAAGCCCAGGAATGGCCGTGGCAAGCCAGGCAGGCCTCCAAAGTCCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS TCA 90 bp | GGGTTGCAATCATGGTGGTCATGCAGTTCCCTCCCAGACTGTCTCTaGGCACGCTGGTCATCATGGAGTTCCTGTAAGGGATGTGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GLQSWWSCSSLPDCL*ARWSSWSSCKGCVY Trigger: GTACACACATCCCTTACAGGAACTCCATGATGACCAGCGTGCTCAGAGACAGTCTGGGAGGGAACTGCATGACCACCATGATTGCAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CCA 90 bp | ATGCTCTGTCTGGCCTTGATGAATGCTAGGATGTCGGAGTCTGTCTaGCTGTCTCCAGTGAGAGGGATGGATGATAGGGGCCTATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: MLCLALMNARMSESV*LSPVRGMDDRGLSC Trigger: GCAAGATAGGCCCCTATCATCCATCCCTCTCACTGGAGACAGCCAGACAGACTCCGACATCCTAGCATTCATCAAGGCCAGACAGAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCTCTGAGTAGCTTCCCACTGCTTTCTGGTACTGTGAGGTCCTCAGACTGCGAGCTTCCTCCTCAGTaGTTGCCTGATGCAGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: RALSSFPLLSGTVRSSDCELPPQ*LPDAET Trigger: TGTCTCTGCATCAGGCAACAACTGAGGAGGAAGCTC...GCAGTCTGAGGACCTCACAGTACCAGAAAGCAGTGGGAAGCTACTCAGAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGGGCACGAGGGTGCTGCTCAGATCTTCTGGGTAAAGGGCTCCTCCTCTGTCTTCAATCTCCTTTaGCAAGCGAACAATCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: CQGHEGAAQIFWVKGSSSVFNLL*QANNHQ Trigger: CTGATGATTGTTCGCTTGCAAAAGGAGATTGAAGAC...AGAGGAGGAGCCCTTTACCCAGAAGATCTGAGCAGCACCCTCGTGCCCCTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | GTAAAGGGCTCCTCCTCTGGCCTCAGATTTGCCAGCTGCTTCCTGGGGAGTCTTAACTCTTTCTGCAGCTaGACCTTGGCTTTGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: VKGSSSGLRFASCFLGSLNSFCS*TLALSM Trigger: CATGGACAAAGCCAAGGTCAAGCTGCAGAAAGAGTT...AAGACTCCCCAGGAAGCAGCTGGCAAATCTGAGGCCAGAGGAGGAGCCCTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CCA 90 bp | TGCTTCAGAACCTGTTTGTTGTCCTCGATGGTGACACTGTCAGCGTaGTCCCTCTTGAAAATCTCAAAAGCCTCCTGGCGTCCCAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: CFRTCLLSSMVTLSA*SLLKISKASWRPSD Trigger: GTCACTGGGACGCCAGGAGGCTTTTGAGATTTTCAAGAGGGACCACGCTGACAGTGTCACCATCGAGGACAACAAACAGGTTCTGAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCTTCCTGGGGAGTCTTTCCATCGAATGTGAGGTCACGAGTGAGGGAGGGGTTTCTCCCAGAGCTTTaGCTTCAGAAAATCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AASWGVFPSNVRSRVREGFLPEL*LQKISA Trigger: AGCAGAGATTTTCTGAAGCAAAAGCTCTGGGAGAAA...CCCCTCCCTCACTCGTGACCTCACATTCGATGGAAAGACTCCCCAGGAAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | GGGCTATCATCCTCCTGCATTGCACTGCCTGGAATGTCCCCACCTGTGTATCATTCTCGAGAACTTTTCTaGGAGAGAAGCTGTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLSSSCIALPGMSPPVYHSRELF*ERSCAW Trigger: CCAGGCACAGCTTCTCTCCAAGAAAAGTTCTCGAGA...ATGATACACAGGTGGGGACATTCCAGGCAGTGCAATGCAGGAGGATGATAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | GGGCTATCATCCTCCTGCATTGCACTGCCTGGAATGTCCCCACCTGTGTATCATATGCTCTGTCTGGCCTaGATGAATGCTAGGATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GLSSSCIALPGMSPPVYHMLCLA*MNARMS Trigger: CGACATCCTAGCATTCATCAAGGCCAGACAGAGCAT...ATGATACACAGGTGGGGACATTCCAGGCAGTGCAATGCAGGAGGATGATAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS GCA 90 bp | GGTGTCCCCCAAGAAGAGCAGGTTCAGAGCTTCCTCCTCAGTTGTTaGCTGATGCAGAGACAGGTTTTTCAGGTGAATGTTCTGATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVPQEEQVQSFLLSC*LMQRQVFQVNVLIR Trigger: CCTGATCAGAACATTCACCTGAAAAACCTGTCTCTGCATCAGGCAACAACTGAGGAGGAAGCTCTGAACCTGCTCTTCTTGGGGGACACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CCA 90 bp | GATCAGGGTCCTCCAATATTGTCACTTTCGGCAGATCTTCCAGTTTaGAGGCTTCGTGTCTGGGATCCAGCAGGTCATAGCCACATTCGT | + |
|
Preference number: 5 (lower is better) Translates to: DQGPPILSLSADLPV*RLRVWDPAGHSHIR Trigger: ACGAATGTGGCTATGACCTGCTGGATCCCAGACACGAAGCCTCCAAACTGGAAGATCTGCCGAAAGTGACAATATTGGAGGACCCTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | GTACATAGCTCCCTGAAGACGGGGCAAGTGGGTGATGGTTTGGGCTGGTACGGTCTCGAAAATGATCTCTaGCTTAGCCTCTTGGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VHSSLKTGQVGDGLGWYGLENDL*LSLLVK Trigger: TTTGACCAAGAGGCTAAGCAAGAGATCATTTTCGAG...ACCGTACCAGCCCAAACCATCACCCACTTGCCCCGTCTTCAGGGAGCTATGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGTAGTGCCCACCCTGTCAGCAACTCTGTCAGGACTTCCTGTCAGCCCTGCTTCTCTAGGGTCTTCTaGTCATTCAACAGCTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LGSAHPVSNSVRTSCQPCFSRVF*SFNSFL Trigger: TAAGAAGCTGTTGAATGACAAGAAGACCCTAGAGAA...GCAGGGCTGACAGGAAGTCCTGACAGAGTTGCTGACAGGGTGGGCACTACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS GCA 90 bp | GGTGGAGATAGACTCATCAATGTTCCTCTTCTCCAAAGACAGGGTTaGAATCATGGTGGTCATGCAGTTCCCTCCCAGACTGTCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGDRLINVPLLQRQG*NHGGHAVPSQTVSE Trigger: CTCAGAGACAGTCTGGGAGGGAACTGCATGACCACCATGATTGCAACCCTGTCTTTGGAGAAGAGGAACATTGATGAGTCTATCTCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS GCA 90 bp | CCTGTGGCCATGGCCAACTCTGCCTTCAAGTCTTCAATCTCCTTTTaGAAGCGAACAATCATCAGCCTGGGATCAATCTCTTCGTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PVAMANSAFKSSISF*KRTIISLGSISSLR Trigger: TCTCAACGAAGAGATTGATCCCAGGCTGATGATTGTTCGCTTGCAAAAGGAGATTGAAGACTTGAAGGCAGAGTTGGCCATGGCCACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | GGGCTATCATCCTCCTGCATTGCACTGCCTGGAATGTCCCCACCTGTGTATCATCTTGCTGCTGTCCTTTaGCAACTGCTCAAAAATGTA | + |
|
Preference number: 5 (lower is better) Translates to: GLSSSCIALPGMSPPVYHLAAVL*QLLKNV Trigger: TACATTTTTGAGCAGTTGCAAAAGGACAGCAGCAAG...ATGATACACAGGTGGGGACATTCCAGGCAGTGCAATGCAGGAGGATGATAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | TATCATCCTCCTGCATTGCACTGCCTGGAATGTCCCCACCTGTGTATCATGATGTCGACTCTCTGGATCTaGGTCTTCCAAATAGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: YHPPALHCLECPHLCIMMSTLWI*VFQIGC Trigger: GCATCCTATTTGGAAGACCAAGATCCAGAGAGTCGA...CATCATGATACACAGGTGGGGACATTCCAGGCAGTGCAATGCAGGAGGATGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCTCTGAGTAGCTTCCCACTGCTTTCTGGTACTGTGAGGTCCTCAGACTGCCTCTTGCTTAGCCTCTaGGTCAAAAATCCTTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RALSSFPLLSGTVRSSDCLLLSL*VKNPLK Trigger: TTTCAAAGGATTTTTGACCAAGAGGCTAAGCAAGAG...GCAGTCTGAGGACCTCACAGTACCAGAAAGCAGTGGGAAGCTACTCAGAGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CCA 90 bp | ATATTGTCACTTTCGGCAGATCTTCCAGTTTGGAGGCTTCGTGTCTaGGATCCAGCAGGTCATAGCCACATTCGTTGTAGATTTCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ILSLSADLPVWRLRV*DPAGHSHIRCRFPS Trigger: ACTTGGAAATCTACAACGAATGTGGCTATGACCTGCTGGATCCCAGACACGAAGCCTCCAAACTGGAAGATCTGCCGAAAGTGACAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS TCA 90 bp | ATCTCTTCGTTGAGAATGGCTTCGTTTTTAATTAGGGCCACTCGCTaGGCAAATCTGCAGGTGGAGATAGACTCATCAATGTTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISSLRMASFLIRATR*ANLQVEIDSSMFLF Trigger: GAAGAGGAACATTGATGAGTCTATCTCCACCTGCAGATTTGCTCAGCGAGTGGCCCTAATTAAAAACGAAGCCATTCTCAACGAAGAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS GCA 90 bp | AGGAGCTTTGTATATTCTTCATCTCTCAATGGTTCTTGGCATGCTTaGCGTGTGCTTTCAGAGGAGACAGTATTCTCTAGGGTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSFVYSSSLNGSWHA*RVLSEETVFSRVFL Trigger: CAAGAAGACCCTAGAGAATACTGTCTCCTCTGAAAGCACACGGCAAGCATGCCAAGAACCATTGAGAGATGAAGAATATACAAAGCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCAGGTCATAGCCACATTCGTTGTAGATTTCCAAGTAAGAAATGTGTGTCGCTCGAAAATGATCTCTaGCTTAGCCTCTTGGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PAGHSHIRCRFPSKKCVSLENDL*LSLLVK Trigger: TTTGACCAAGAGGCTAAGCAAGAGATCATTTTCGAG...CGACACACATTTCTTACTTGGAAATCTACAACGAATGTGGCTATGACCTGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
||
| CDS GCA 90 bp | TTGTATATTCTTCATCTCTCAATGGTTCTTGGCATGCTTGCCGTGTaGTTTCAGAGGAGACAGTATTCTCTAGGGTCTTCTTGTCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LYILHLSMVLGMLAV*FQRRQYSLGSSCHS Trigger: TGAATGACAAGAAGACCCTAGAGAATACTGTCTCCTCTGAAAGCACACGGCAAGCATGCCAAGAACCATTGAGAGATGAAGAATATACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCAGGTCATAGCCACATTCGTTGTAGATTTCCAAGTAAGAAATGTGTGTCGCTCTTGCTTAGCCTCTaGGTCAAAAATCCTTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PAGHSHIRCRFPSKKCVSLLLSL*VKNPLK Trigger: TTTCAAAGGATTTTTGACCAAGAGGCTAAGCAAGAG...CGACACACATTTCTTACTTGGAAATCTACAACGAATGTGGCTATGACCTGCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
||
| CDS TCA 72 bp | CCTGCAGATGCTGAGGTCCTGGGTGTGGCTCGGGGCTaGGGAGAATGGGGTCCTTGGGACCGCTGGGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PADAEVLGVARG*GEWGPWDRWAP Trigger: GGGAGCCCAGCGGTCCCAAGGACCCCATTCTCCTCAGCCCCGAGCCACACCCAGGACCTCAGCATCTGCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CCA 72 bp | CTGGATCTGTGCCTGCAGATGCTGAGGTCCTGGGTGTaGCTCGGGGCTGAGGAGAATGGGGTCCTTGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: LDLCLQMLRSWV*LGAEENGVLGT Trigger: GGTCCCAAGGACCCCATTCTCCTCAGCCCCGAGCCACACCCAGGACCTCAGCATCTGCAGGCACAGATCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CCA 72 bp | GCTGGGGAAACGGCTTCACAGCATCCTGGAGGTTCGTaGCCGGGGAGTTTACCTGCAGGCTGGTGGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AGETASQHPGGS*PGSLPAGWWPP Trigger: AGGAGGCCACCAGCCTGCAGGTAAACTCCCCGGCCACGAACCTCCAGGATGCTGTGAAGCCGTTTCCCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CCA 72 bp | GCCTGGTCCTGCTGGGGAAACGGCTTCACAGCATCCTaGAGGTTCGTGGCCGGGGAGTTTACCTGCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AWSCWGNGFTAS*RFVAGEFTCRL Trigger: CAGCCTGCAGGTAAACTCCCCGGCCACGAACCTCCAGGATGCTGTGAAGCCGTTTCCCCAGCAGGACCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CCA 72 bp | GGACCCTGGAGCCACTGGGCTCTTGGCTTTGCTGGTTaGGGCAGGGGGAGGGAAGGATTCTTCTGGCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: GPWSHWALGFAG*GRGREGFFWHS Trigger: GGAATGCCAGAAGAATCCTTCCCTCCCCCTGCCCCAACCAGCAAAGCCAAGAGCCCAGTGGCTCCAGGGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CCA 72 bp | ACCAGGACCCTGGAGCCACTGGGCTCTTGGCTTTGCTaGTTGGGGCAGGGGGAGGGAAGGATTCTTCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TRTLEPLGSWLC*LGQGEGRILLA Trigger: TGCCAGAAGAATCCTTCCCTCCCCCTGCCCCAACCAGCAAAGCCAAGAGCCCAGTGGCTCCAGGGTCCTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS TCA 72 bp | AGAATGGGGTCCTTGGGACCGCTGGGCTCCCAGCGATaGAGGGCGAGTTCTGAGGTGGCCTGGTATCGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RMGSLGPLGSQR*RASSEVAWYRF Trigger: AAAGCGATACCAGGCCACCTCAGAACTCGCCCTTCATCGCTGGGAGCCCAGCGGTCCCAAGGACCCCATTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CCA 72 bp | AGCAAGCTGGATCTGTGCCTGCAGATGCTGAGGTCCTaGGTGTGGCTCGGGGCTGAGGAGAATGGGGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SKLDLCLQMLRS*VWLGAEENGVL Trigger: AAGGACCCCATTCTCCTCAGCCCCGAGCCACACCCAGGACCTCAGCATCTGCAGGCACAGATCCAGCTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CCA 72 bp | TTCTCCTCCTCCAGCTGTGCTCGCAGTTTCTCCTCCTaGGGGTCAGGCGTGGAGGCTGGGACAGTGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FSSSSCARSFSS*GSGVEAGTVFS Trigger: AGAGAACACTGTCCCAGCCTCCACGCCTGACCCCCAGGAGGAGAAACTGCGAGCACAGCTGGAGGAGGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CCA 72 bp | GGATGGATGATAGGGGCCTATCTTGCACCAGGACCCTaGAGCCACTGGGCTCTTGGCTTTGCTGGTTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GWMIGAYLAPGP*SHWALGFAGWG Trigger: GCCCCAACCAGCAAAGCCAAGAGCCCAGTGGCTCCAGGGTCCTGGTGCAAGATAGGCCCCTATCATCCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS TCA 72 bp | AAGCAGGCCCCCGACTCCAGTCTTCGAGACACGCTCTaGCCCTGCCAGGTCAACCAGATGGAGCTTAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: KQAPDSSLRDTL*PCQVNQMELSM Trigger: CATGCTAAGCTCCATCTGGTTGACCTGGCAGGGTCAGAGCGTGTCTCGAAGACTGGAGTCGGGGGCCTGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS TCA 72 bp | GGGACCGCTGGGCTCCCAGCGATGAAGGGCGAGTTCTaGGGTGGCCTGGTATCGCTTTTCTCTAGGCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GTAGLPAMKGEF*GGLVSLFSRLE Trigger: TTCAAGCCTAGAGAAAAGCGATACCAGGCCACCTCAGAACTCGCCCTTCATCGCTGGGAGCCCAGCGGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS TCA 72 bp | TTTTGTGGAGCAAGCTGGATCTGTGCCTGCAGATGCTaGGGTCCTGGGTGTGGCTCGGGGCTGAGGAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: FCGASWICACRC*GPGCGSGLRRM Trigger: CATTCTCCTCAGCCCCGAGCCACACCCAGGACCTCAGCATCTGCAGGCACAGATCCAGCTTGCTCCACAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CAA 72 bp | TCCTCTGCCCACCAGGCCTCGAACTCTTTCTGCAGCTaGACCTTGGCTTTGTCCATGAGCAGCTGCAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSAHQASNSFCS*TLALSMSSCRC Trigger: GCACCTGCAGCTGCTCATGGACAAAGCCAAGGTCAAGCTGCAGAAAGAGTTCGAGGCCTGGTGGGCAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS GCA 72 bp | CGGACGGTGGCAGAACCTGGCTCCTTGCTGCTCAAGTaGACAGTGAAAATACAGTGTGACCGGGTTGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTVAEPGSLLLK*TVKIQCDRVEA Trigger: AGCTTCAACCCGGTCACACTGTATTTTCACTGTGCACTTGAGCAGCAAGGAGCCAGGTTCTGCCACCGTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS GCA 72 bp | TGCAGGTGCTCTATCTCCACCTTCAGGGCCTTCAGGTaGATAAAGGCCGTTTTGTACCTGCCCTTCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CRCSISTFRAFR*IKAVLYLPFSS Trigger: GGAGGAGAAGGGCAGGTACAAAACGGCCTTTATGCACCTGAAGGCCCTGAAGGTGGAGATAGAGCACCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CCA 72 bp | GAACTTTTCTTGGAGAGAAGCTGTGCCTGGTCCTGCTaGGGAAACGGCTTCACAGCATCCTGGAGGTTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: ELFLERSCAWSC*GNGFTASWRFV Trigger: CACGAACCTCCAGGATGCTGTGAAGCCGTTTCCCCAGCAGGACCAGGCACAGCTTCTCTCCAAGAAAAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CCA 72 bp | CTGGCCTTGATGAATGCTAGGATGTCGGAGTCTGTCTaGCTGTCTCCAGTGAGAGGGATGGATGATAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LALMNARMSESV*LSPVRGMDDRG Trigger: GCCCCTATCATCCATCCCTCTCACTGGAGACAGCCAGACAGACTCCGACATCCTAGCATTCATCAAGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS TCA 72 bp | TCATGGTGGTCATGCAGTTCCCTCCCAGACTGTCTCTaGGCACGCTGGTCATCATGGAGTTCCTGTAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SWWSCSSLPDCL*ARWSSWSSCKG Trigger: TCCCTTACAGGAACTCCATGATGACCAGCGTGCTCAGAGACAGTCTGGGAGGGAACTGCATGACCACCATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CCA 72 bp | AAGTCTCGAGAACTTTTCTTGGAGAGAAGCTGTGCCTaGTCCTGCTGGGGAAACGGCTTCACAGCATCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KSRELFLERSCA*SCWGNGFTASW Trigger: CCAGGATGCTGTGAAGCCGTTTCCCCAGCAGGACCAGGCACAGCTTCTCTCCAAGAAAAGTTCTCGAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CAA 72 bp | TTGTCCTCGATGGTGACACTGTCAGCGTGGTCCCTCTaGAAAATCTCAAAAGCCTCCTGGCGTCCCAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LSSMVTLSAWSL*KISKASWRPSD Trigger: GTCACTGGGACGCCAGGAGGCTTTTGAGATTTTCAAGAGGGACCACGCTGACAGTGTCACCATCGAGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CAA 90 bp | ACCAGATGGAGCTTAGCATGTCGGACGGTGGCAGAACCTGGCTCCTaGCTGCTCAAGTGCACAGTGAAAATACAGTGTGACCGGGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TRWSLACRTVAEPGS*LLKCTVKIQCDRVE Trigger: TTCAACCCGGTCACACTGTATTTTCACTGTGCACTTGAGCAGCAAGGAGCCAGGTTCTGCCACCGTCCGACATGCTAAGCTCCATCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS GCA 72 bp | CTCTGTCCTCTGCTCTCCTGTGGCCATGGCCAACTCTaGCTTCAAGTCTTCAATCTCCTTTTGCAAGCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LCPLLSCGHGQL*LQVFNLLLQAN Trigger: GTTCGCTTGCAAAAGGAGATTGAAGACTTGAAGGCAGAGTTGGCCATGGCCACAGGAGAGCAGAGGACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS GCA 72 bp | GCTGGGACAGTGTTCTCTGAGATTCCAAGAGCTACTTaGTGTAGGTGCCGCTGGTTGATGGCATCTTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AGTVFSEIPRAT*CRCRWLMASFS Trigger: GCTGAAAGATGCCATCAACCAGCGGCACCTACAGCAAGTAGCTCTTGGAATCTCAGAGAACACTGTCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS GCA 72 bp | TTCCAAGTCTCGAGAACTTTTCTTGGAGAGAAGCTGTaGCTGGTCCTGCTGGGGAAACGGCTTCACAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: FQVSRTFLGEKL*LVLLGKRLHSI Trigger: GATGCTGTGAAGCCGTTTCCCCAGCAGGACCAGGCACAGCTTCTCTCCAAGAAAAGTTCTCGAGACTTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CCA 72 bp | CAGATGGAGCTTAGCATGTCGGACGGTGGCAGAACCTaGCTCCTTGCTGCTCAAGTGCACAGTGAAAATACA | + |
|
Preference number: 6 (lower is better) Translates to: QMELSMSDGGRT*LLAAQVHSENT Trigger: TGTATTTTCACTGTGCACTTGAGCAGCAAGGAGCCAGGTTCTGCCACCGTCCGACATGCTAAGCTCCATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CCA 72 bp | TCAGCGTGGTCCCTCTTGAAAATCTCAAAAGCCTCCTaGCGTCCCAGTGACATCTCCTCTCTCATCCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SAWSLLKISKAS*RPSDISSLIPV Trigger: AACAGGGATGAGAGAGGAGATGTCACTGGGACGCCAGGAGGCTTTTGAGATTTTCAAGAGGGACCACGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CAA 72 bp | AGCTTAGCATGTCGGACGGTGGCAGAACCTGGCTCCTaGCTGCTCAAGTGCACAGTGAAAATACAGTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLACRTVAEPGS*LLKCTVKIQCD Trigger: GTCACACTGTATTTTCACTGTGCACTTGAGCAGCAAGGAGCCAGGTTCTGCCACCGTCCGACATGCTAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CAA 90 bp | ACCTGTTTGTTGTCCTCGATGGTGACACTGTCAGCGTGGTCCCTCTaGAAAATCTCAAAAGCCTCCTGGCGTCCCAGTGACATCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TCLLSSMVTLSAWSL*KISKASWRPSDISS Trigger: AGAGGAGATGTCACTGGGACGCCAGGAGGCTTTTGAGATTTTCAAGAGGGACCACGCTGACAGTGTCACCATCGAGGACAACAAACAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CAA 90 bp | CAGTTGCTTCCCAGGCATTTCTTCTGTAGAATGCTCTGTCTGGCCTaGATGAATGCTAGGATGTCGGAGTCTGTCTGGCTGTCTCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QLLPRHFFCRMLCLA*MNARMSESVWLSPV Trigger: CACTGGAGACAGCCAGACAGACTCCGACATCCTAGCATTCATCAAGGCCAGACAGAGCATTCTACAGAAGAAATGCCTGGGAAGCAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS GCA 72 bp | GGATTCTTCTGGCATTCCTATCGCAGACCTCCAGCCTaGCAGCTCCATTTTCAACTTCCAAGTCTCGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GFFWHSYRRPPA*QLHFQLPSLEN Trigger: GTTCTCGAGACTTGGAAGTTGAAAATGGAGCTGGCAGGCTGGAGGTCTGCGATAGGAATGCCAGAAGAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CCA 72 bp | ACCTGTTTGTTGTCCTCGATGGTGACACTGTCAGCGTaGTCCCTCTTGAAAATCTCAAAAGCCTCCTGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: TCLLSSMVTLSA*SLLKISKASWR Trigger: ACGCCAGGAGGCTTTTGAGATTTTCAAGAGGGACCACGCTGACAGTGTCACCATCGAGGACAACAAACAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
||
| CDS CAA 72 bp | CCCCCAAGAAGAGCAGGTTCAGAGCTTCCTCCTCAGTaGTTGCCTGATGCAGAGACAGGTTTTTCAGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PPRRAGSELPPQ*LPDAETGFSGE Trigger: TTCACCTGAAAAACCTGTCTCTGCATCAGGCAACAACTGAGGAGGAAGCTCTGAACCTGCTCTTCTTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS TCA 72 bp | TGGCAGAACCTGGCTCCTTGCTGCTCAAGTGCACAGTaGAAATACAGTGTGACCGGGTTGAAGCTTGATTCA | + |
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Preference number: 6 (lower is better) Translates to: WQNLAPCCSSAQ*KYSVTGLKLDS Trigger: TGAATCAAGCTTCAACCCGGTCACACTGTATTTTCACTGTGCACTTGAGCAGCAAGGAGCCAGGTTCTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CAA 90 bp | TGTTGGTGTCCCCCAAGAAGAGCAGGTTCAGAGCTTCCTCCTCAGTaGTTGCCTGATGCAGAGACAGGTTTTTCAGGTGAATGTTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: CWCPPRRAGSELPPQ*LPDAETGFSGECSD Trigger: ATCAGAACATTCACCTGAAAAACCTGTCTCTGCATCAGGCAACAACTGAGGAGGAAGCTCTGAACCTGCTCTTCTTGGGGGACACCAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CAA 90 bp | TCCTGTGGCCATGGCCAACTCTGCCTTCAAGTCTTCAATCTCCTTTaGCAAGCGAACAATCATCAGCCTGGGATCAATCTCTTCGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SCGHGQLCLQVFNLL*QANNHQPGINLFVE Trigger: CTCAACGAAGAGATTGATCCCAGGCTGATGATTGTTCGCTTGCAAAAGGAGATTGAAGACTTGAAGGCAGAGTTGGCCATGGCCACAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CAA 90 bp | GAGACAGGTTTTTCAGGTGAATGTTCTGATCAGGGTCCTCCAATATaGTCACTTTCGGCAGATCTTCCAGTTTGGAGGCTTCGTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ETGFSGECSDQGPPI*SLSADLPVWRLRVW Trigger: CCAGACACGAAGCCTCCAAACTGGAAGATCTGCCGAAAGTGACAATATTGGAGGACCCTGATCAGAACATTCACCTGAAAAACCTGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS TCA 72 bp | TGCACAGTGAAAATACAGTGTGACCGGGTTGAAGCTTaGTTCATAGGAGTCTCAGCGATCATCCTGTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: CTVKIQCDRVEA*FIGVSAIILLV Trigger: CACCAACAGGATGATCGCTGAGACTCCTATGAATCAAGCTTCAACCCGGTCACACTGTATTTTCACTGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS GCA 72 bp | CTTCATCTCTCAATGGTTCTTGGCATGCTTGCCGTGTaGTTTCAGAGGAGACAGTATTCTCTAGGGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LHLSMVLGMLAV*FQRRQYSLGSS Trigger: AGAAGACCCTAGAGAATACTGTCTCCTCTGAAAGCACACGGCAAGCATGCCAAGAACCATTGAGAGATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CAA 72 bp | CATGGCCAACTCTGCCTTCAAGTCTTCAATCTCCTTTaGCAAGCGAACAATCATCAGCCTGGGATCAATCTC | + |
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Preference number: 6 (lower is better) Translates to: HGQLCLQVFNLL*QANNHQPGINL Trigger: GAGATTGATCCCAGGCTGATGATTGTTCGCTTGCAAAAGGAGATTGAAGACTTGAAGGCAGAGTTGGCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CAA 72 bp | AAGCGAACAATCATCAGCCTGGGATCAATCTCTTCGTaGAGAATGGCTTCGTTTTTAATTAGGGCCACTCGC | + |
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Preference number: 6 (lower is better) Translates to: KRTIISLGSISS*RMASFLIRATR Trigger: GCGAGTGGCCCTAATTAAAAACGAAGCCATTCTCAACGAAGAGATTGATCCCAGGCTGATGATTGTTCGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS TCA 72 bp | TTGAGAATGGCTTCGTTTTTAATTAGGGCCACTCGCTaGGCAAATCTGCAGGTGGAGATAGACTCATCAATG | + |
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Preference number: 6 (lower is better) Translates to: LRMASFLIRATR*ANLQVEIDSSM Trigger: CATTGATGAGTCTATCTCCACCTGCAGATTTGCTCAGCGAGTGGCCCTAATTAAAAACGAAGCCATTCTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CAA 72 bp | TTTTCAGGTGAATGTTCTGATCAGGGTCCTCCAATATaGTCACTTTCGGCAGATCTTCCAGTTTGGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: FSGECSDQGPPI*SLSADLPVWRL Trigger: AAGCCTCCAAACTGGAAGATCTGCCGAAAGTGACAATATTGGAGGACCCTGATCAGAACATTCACCTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CAA 90 bp | GGTACTCTCGGCGACTGGTTTGGCAATGATCTCGAAAATGATCTCTaGCTTAGCCTCTTGGTCAAAAATCCTTTGAAACTTAAACTTGTA | + |
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Preference number: 6 (lower is better) Translates to: GTLGDWFGNDLENDL*LSLLVKNPLKLKLV Trigger: TACAAGTTTAAGTTTCAAAGGATTTTTGACCAAGAGGCTAAGCAAGAGATCATTTTCGAGATCATTGCCAAACCAGTCGCCGAGAGTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS GCA 72 bp | AACATATTGACCAGGATATTGATCTCGTTGTCCCTCTaGTTGAGAAGACCTAGGAGCTTTGTATATTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: NILTRILISLSL*LRRPRSFVYSS Trigger: TGAAGAATATACAAAGCTCCTAGGTCTTCTCAAGCAGAGGGACAACGAGATCAATATCCTGGTCAATATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162854.2 |
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| CDS CAA 90 bp | TTATCTCTCGGCGACTGGTTTGGCAATGATCTCGAAAATGATCTCTaGCTTAGCCTCTTGGTCAAAAATCCTTTGAAACTTAAACTTGTA | + |
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Preference number: 6 (lower is better) Translates to: LSLGDWFGNDLENDL*LSLLVKNPLKLKLV Trigger: TACAAGTTTAAGTTTCAAAGGATTTTTGACCAAGAGGCTAAGCAAGAGATCATTTTCGAGATCATTGCCAAACCAGTCGCCGAGAGATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162029.8 |
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