Pregenerated sensors for KIF5C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026764Ensembl transcript IDs: ENSMUST00000028102.14, ENSMUST00000146247.2
Found 229 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGCGTGGTCACTGGTTCCACTGCACTTGATTGTCCCTCTAGGATaGCACAGCAGGGCGTTCCATTCCAAGGGGCCAGTGCACTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: RAWSLVPLHLIVPLG*HSRAFHSKGPVHCR Trigger: CCTGCAGTGCACTGGCCCCTTGGAATGGAACGCCCTGCTGTGCCATCCTAGAGGGACAATCAAGTGCAGTGGAACCAGTGACCACGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR TCA 90 bp | CTTCTACCCAGAGTCCCCGTGGCGCCTGCCCTACAAAGGAAGGGGTaGCTGAAGCTTTACGATCCTTTAGCTATTCTAGGAAAGAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: LLPRVPVAPALQRKG*LKLYDPLAILGKRS Trigger: GCTTCTCTTTCCTAGAATAGCTAAAGGATCGTAAAGCTTCAGTCACCCCTTCCTTTGTAGGGCAGGCGCCACGGGGACTCTGGGTAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR GCA 90 bp | TATAGGAATGATGTTCAAACAACTGGGCTGGCCAGGACTAGTCACTaGAGGTTCACCAGCGAGCAGCTTGGAGGTGAATTCTGTGACTCT | + |
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Preference number: 1 (lower is better) Translates to: YRNDVQTTGLARTSH*RFTSEQLGGEFCDS Trigger: AGAGTCACAGAATTCACCTCCAAGCTGCTCGCTGGTGAACCTGCAGTGACTAGTCCTGGCCAGCCCAGTTGTTTGAACATCATTCCTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR GCA 90 bp | CCCCAACGGCTGGCAGGCAGAGGTTATTTGTCTAAACCATCTGGCTaGACTCCTACGGCATCTCAGAGTAAACTTTCAAGAAGTAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: PQRLAGRGYLSKPSG*TPTASQSKLSRSRH Trigger: ATGCCTACTTCTTGAAAGTTTACTCTGAGATGCCGTAGGAGTGCAGCCAGATGGTTTAGACAAATAACCTCTGCCTGCCAGCCGTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR CCA 90 bp | AGCATTTTCAACTCTTGTATAGGAATGATGTTCAAACAACTGGGCTaGCCAGGACTAGTCACTGCAGGTTCACCAGCGAGCAGCTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: SIFNSCIGMMFKQLG*PGLVTAGSPASSLE Trigger: CTCCAAGCTGCTCGCTGGTGAACCTGCAGTGACTAGTCCTGGCCAGCCCAGTTGTTTGAACATCATTCCTATACAAGAGTTGAAAATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR TCA 90 bp | CCAAGCACGTATCTGTGCACACAAATTCTACACAGCGCAAACACCTaGATCTGGTGTACTACAGACGGCTGGGCAAGCAAGTGTAAAAAG | + |
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Preference number: 1 (lower is better) Translates to: PSTYLCTQILHSANT*IWCTTDGWASKCKK Trigger: CTTTTTACACTTGCTTGCCCAGCCGTCTGTAGTACACCAGATTCAGGTGTTTGCGCTGTGTAGAATTTGTGTGCACAGATACGTGCTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR CCA 90 bp | AGTAATGTGTTTATTTTACAGGAAACCAGAAGTCGAGGCAGAGCGTaGTCACTGGTTCCACTGCACTTGATTGTCCCTCTAGGATGGCAC | + |
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Preference number: 1 (lower is better) Translates to: SNVFILQETRSRGRA*SLVPLHLIVPLGWH Trigger: GTGCCATCCTAGAGGGACAATCAAGTGCAGTGGAACCAGTGACCACGCTCTGCCTCGACTTCTGGTTTCCTGTAAAATAAACACATTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR TCA 90 bp | GAGGTGAATTCTGTGACTCTTCGCATTTTCATAGATGTGTCTGAATaGGCAAATTCTACACTGCTATTGTCAAACTGTTTTTCTGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: EVNSVTLRIFIDVSE*ANSTLLLSNCFSAL Trigger: CAAGGCAGAAAAACAGTTTGACAATAGCAGTGTAGAATTTGCTCATTCAGACACATCTATGAAAATGCGAAGAGTCACAGAATTCACCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR TCA 90 bp | CTTGGAGGTGAATTCTGTGACTCTTCGCATTTTCATAGATGTGTCTaGATGAGCAAATTCTACACTGCTATTGTCAAACTGTTTTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: LGGEFCDSSHFHRCV*MSKFYTAIVKLFFC Trigger: GCAGAAAAACAGTTTGACAATAGCAGTGTAGAATTTGCTCATTCAGACACATCTATGAAAATGCGAAGAGTCACAGAATTCACCTCCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR GCA 90 bp | AATGAAATCTACTGTACAGAACATAAAGCCCAGAGAACAGACATCTaGAGTACACATGACACTTTACAAACTAGACAGATAGAATTCTAC | + |
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Preference number: 1 (lower is better) Translates to: NEIYCTEHKAQRTDI*STHDTLQTRQIEFY Trigger: GTAGAATTCTATCTGTCTAGTTTGTAAAGTGTCATGTGTACTGCAGATGTCTGTTCTCTGGGCTTTATGTTCTGTACAGTAGATTTCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR CCA 90 bp | TCTAAAATCATCCATTTTATAATGGCTGCTAATGAAAGCCAAGAATaGGGTATTACTGACCCGTACCCAGTTTCTAAACACAAGTCTAAA | + |
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Preference number: 1 (lower is better) Translates to: SKIIHFIMAANESQE*GITDPYPVSKHKSK Trigger: TTTAGACTTGTGTTTAGAAACTGGGTACGGGTCAGTAATACCCCATTCTTGGCTTTCATTAGCAGCCATTATAAAATGGATGATTTTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR GCA 90 bp | CTAGTCACTGCAGGTTCACCAGCGAGCAGCTTGGAGGTGAATTCTGTGACTCTTAAGGGGCCAGTGCACTaGAGGGGCCTCCAGAGACCA | + |
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Preference number: 2 (lower is better) Translates to: LVTAGSPASSLEVNSVTLKGPVH*RGLQRP Trigger: TGGTCTCTGGAGGCCCCTGCAGTGCACTGGCCCCTT...AAGAGTCACAGAATTCACCTCCAAGCTGCTCGCTGGTGAACCTGCAGTGACTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTCCACCCTCACAGCCTTaGGAAAGCCTAGAGTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: QSFPRAREGYFQIFGDISPPSQP*ESLESP Trigger: GGGAGACTCTAGGCTTTCTCAAGGCTGTGAGGGTGG...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR CAA 90 bp | CTGGGCTGGCCAGGACTAGTCACTGCAGGTTCACCAGCGAGCAGCTaGGAGGTGAATTCTGTGACTCTTCGCATTTTCATAGATGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: LGWPGLVTAGSPASS*EVNSVTLRIFIDVS Trigger: AGACACATCTATGAAAATGCGAAGAGTCACAGAATTCACCTCCAAGCTGCTCGCTGGTGAACCTGCAGTGACTAGTCCTGGCCAGCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR GCA 90 bp | CATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTGGCAGGAAGTGGGTATTaGGTAACCCCCTCCTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: HTFQQCETCDEMEPSTWLAGSGY*VTPSFQ Trigger: TTGGAAGGAGGGGGTTACGCAATACCCACTTCCTGC...CAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR GCA 90 bp | TCACAGACCAGTGTTTCCTTTGGCAGTTATCTGGTCCTTACTCAACAGTTGTTTGCCAGGACTAGTCACTaGAGGTTCACCAGCGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SQTSVSFGSYLVLTQQLFARTSH*RFTSEQ Trigger: CTGCTCGCTGGTGAACCTGCAGTGACTAGTCCTGGC...AAACAACTGTTGAGTAAGGACCAGATAACTGCCAAAGGAAACACTGGTCTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR TCA 90 bp | AAATACACATCGCCATTCTCCCCCATCAAACCACAGAAACAAGTTTGTCCACAAAGAAGTGGCGAGGTCTaGGCAGGAAGTGGGTATTGC | + |
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Preference number: 2 (lower is better) Translates to: KYTSPFSPIKPQKQVCPQRSGEV*AGSGYC Trigger: GCAATACCCACTTCCTGCTCAGACCTCGCCACTTCT...TTGTGGACAAACTTGTTTCTGTGGTTTGATGGGGGAGAATGGCGATGTGTATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR GCA 90 bp | GAAAGGACTATACAACAGAATCCTGGAGGTAATATACACAGCCATCAACATTTCATTCCAAGGGGCCAGTaGACTGCAGGGGCCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: ERTIQQNPGGNIHSHQHFIPRGQ*TAGASR Trigger: TCTGGAGGCCCCTGCAGTGCACTGGCCCCTTGGAAT...GAAATGTTGATGGCTGTGTATATTACCTCCAGGATTCTGTTGTATAGTCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR GCA 90 bp | CACATCGCCATTCTCCCCCATCAAACCACAGAAACAAGTTTGTCCACAATTTTTGGTACTGACGGGGTTTaGAGACTTGCCCTGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: HIAILPHQTTETSLSTIFGTDGV*RLALQR Trigger: CCTTTGCAGGGCAAGTCTGCAAACCCCGTCAGTACC...AAAAATTGTGGACAAACTTGTTTCTGTGGTTTGATGGGGGAGAATGGCGATGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR GCA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTTCTGTTCCAATGACGTaGCTAGCTTTTAGTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: QSFPRAREGYFQIFGDISSVPMT*LAFSHS Trigger: ACTGTGACTAAAAGCTAGGCACGTCATTGGAACAGA...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR TCA 90 bp | GCCAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTATAGATGTGTCTGAATaGGCAAATTCTACACTGCTA | + |
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Preference number: 2 (lower is better) Translates to: ARVFRGPGRVTSRSLGTFIDVSE*ANSTLL Trigger: TAGCAGTGTAGAATTTGCTCATTCAGACACATCTAT...AAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTGTCATTTCTCTGAGATaGATGGGGATGTTACTATCT | + |
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Preference number: 2 (lower is better) Translates to: QSFPRAREGYFQIFGDISVISLR*MGMLLS Trigger: AGATAGTAACATCCCCATTCATCTCAGAGAAATGAC...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR TCA 90 bp | CGATCCTTTAGCTATTCTAGGAAAGAGAAGCTGACACAAACCCCATTCCCTCAACTTCAGAAGAAGGTGTaGGCTCACACTTCTTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: RSFSYSRKEKLTQTPFPQLQKKV*AHTSWA Trigger: TGCCCAAGAAGTGTGAGCTCACACCTTCTTCTGAAG...TTGAGGGAATGGGGTTTGTGTCAGCTTCTCTTTCCTAGAATAGCTAAAGGATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR TCA 90 bp | GGGGACATTTCTATCTCACAGGATAGCTATTTAAATACACATCGCCATTCTCCCAAGACTGGCGCTAGATaGACTGACTGGCTGATCAGC | + |
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Preference number: 2 (lower is better) Translates to: GDISISQDSYLNTHRHSPKTGAR*TDWLIS Trigger: GCTGATCAGCCAGTCAGTTCATCTAGCGCCAGTCTT...GGGAGAATGGCGATGTGTATTTAAATAGCTATCCTGTGAGATAGAAATGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGACTATACAACAGAATCCTGGAGGTAATATACACAGCCATCAACATTTCAGTCGAGGCAGAGCGTaGTCACTGGTTCCACTGCAC | + |
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Preference number: 2 (lower is better) Translates to: ERTIQQNPGGNIHSHQHFSRGRA*SLVPLH Trigger: GTGCAGTGGAACCAGTGACCACGCTCTGCCTCGACT...GAAATGTTGATGGCTGTGTATATTACCTCCAGGATTCTGTTGTATAGTCCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTAATAGCAGCCAACAGTaGCAACAACATGAAACAAAG | + |
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Preference number: 2 (lower is better) Translates to: QSFPRAREGYFQIFGDISNSSQQ*QQHETK Trigger: CTTTGTTTCATGTTGTTGCCACTGTTGGCTGCTATT...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR CAA 90 bp | GCTGACACAAACCCCATTCCCTCAAGCTCACATCTCTATATGGACTaGGAGGCTTCAAGGTGTCACTGGATCTACATTCTAGTCAAACAT | + |
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Preference number: 2 (lower is better) Translates to: ADTNPIPSSSHLYMD*EASRCHWIYILVKH Trigger: ATGTTTGACTAGAATGTAGATCCAGTGACACCTTGAAGCCTCCAAGTCCATATAGAGATGTGAGCTTGAGGGAATGGGGTTTGTGTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR TCA 90 bp | CATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTGGATGGGTCATTTCTCTaGGATGAATGGGGATGTTAC | + |
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Preference number: 2 (lower is better) Translates to: HTFQQCETCDEMEPSTWLDGSFL*DEWGCY Trigger: GTAACATCCCCATTCATCTCAGAGAAATGACCCATC...CAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR CCA 90 bp | CATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTGAATGAAAGCCAAGAATaGGGTATTACTGACCCGTAC | + |
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Preference number: 2 (lower is better) Translates to: HTFQQCETCDEMEPSTWLNESQE*GITDPY Trigger: GTACGGGTCAGTAATACCCCATTCTTGGCTTTCATT...CAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR GCA 90 bp | CATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTGCTACAGTCCTTTTCATaGTACGTGGAGTCATATTCT | + |
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Preference number: 2 (lower is better) Translates to: HTFQQCETCDEMEPSTWLLQSFS*YVESYS Trigger: AGAATATGACTCCACGTAGCATGAAAAGGACTGTAG...CAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR GCA 90 bp | GAAAGGACTATACAACAGAATCCTGGAGGTAATATACACAGCCATCAACATTTCCGACTCACTGAAGCCTaGCAGTTTCTCTTGAAACGC | + |
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Preference number: 2 (lower is better) Translates to: ERTIQQNPGGNIHSHQHFRLTEA*QFLLKR Trigger: GCGTTTCAAGAGAAACTGGCAGGCTTCAGTGAGTCG...GAAATGTTGATGGCTGTGTATATTACCTCCAGGATTCTGTTGTATAGTCCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGACTATACAACAGAATCCTGGAGGTAATATACACAGCCATCAACATTTCCTTGGGCACATAAGATaGCAGGATGGGTCATTTCTC | + |
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Preference number: 2 (lower is better) Translates to: ERTIQQNPGGNIHSHQHFLGHIR*QDGSFL Trigger: GAGAAATGACCCATCCTGTCATCTTATGTGCCCAAG...GAAATGTTGATGGCTGTGTATATTACCTCCAGGATTCTGTTGTATAGTCCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR GCA 90 bp | CACATCGCCATTCTCCCCCATCAAACCACAGAAACAAGTTTGTCCACAATTTTTCCACTCACCCAATTCTaGAGCATTTTCAACTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: HIAILPHQTTETSLSTIFPLTQF*SIFNSC Trigger: ACAAGAGTTGAAAATGCTGCAGAATTGGGTGAGTGG...AAAAATTGTGGACAAACTTGTTTCTGTGGTTTGATGGGGGAGAATGGCGATGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR GCA 90 bp | GGGGACATTTCTATCTCACAGGATAGCTATTTAAATACACATCGCCATTCTCCCCCCACTAAAGCAAACTaGTCAGCATTTGAAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: GDISISQDSYLNTHRHSPPTKAN*SAFEEM Trigger: CATCTCTTCAAATGCTGAGCAGTTTGCTTTAGTGGG...GGGAGAATGGCGATGTGTATTTAAATAGCTATCCTGTGAGATAGAAATGTCCCC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR TCA 90 bp | GGGGACATTTCTATCTCACAGGATAGCTATTTAAATACACATCGCCATTCTCCCAGCAGTTTTAAACAGTaGTGGTTCTTTAGCTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: GDISISQDSYLNTHRHSPSSFKQ*WFFSLL Trigger: GAGCAAGCTAAAGAACCATCACTGTTTAAAACTGCT...GGGAGAATGGCGATGTGTATTTAAATAGCTATCCTGTGAGATAGAAATGTCCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGACTATACAACAGAATCCTGGAGGTAATATACACAGCCATCAACATTTCCATAAATCTCACCAATaGCTTTCCCCTGAGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: ERTIQQNPGGNIHSHQHFHKSHQ*LSPEGI Trigger: AATTCCCTCAGGGGAAAGTCATTGGTGAGATTTATG...GAAATGTTGATGGCTGTGTATATTACCTCCAGGATTCTGTTGTATAGTCCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR TCA 90 bp | AAATACACATCGCCATTCTCCCCCATCAAACCACAGAAACAAGTTTGTCCACAACAGCCTGTCAAACAATaGAAACTTTATAAACATGGC | + |
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Preference number: 2 (lower is better) Translates to: KYTSPFSPIKPQKQVCPQQPVKQ*KLYKHG Trigger: GCCATGTTTATAAAGTTTTCATTGTTTGACAGGCTG...TTGTGGACAAACTTGTTTCTGTGGTTTGATGGGGGAGAATGGCGATGTGTATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR GCA 90 bp | TACAGATCCAAAGATATGACCAGGATATTTAAAATGCTCTCTGGGGTTGGTTTTCCAAGCACGTATCTGTaGACACAAATTCTACACAGC | + |
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Preference number: 2 (lower is better) Translates to: YRSKDMTRIFKMLSGVGFPSTYL*TQILHS Trigger: GCTGTGTAGAATTTGTGTGCACAGATACGTGCTTGG...AAAACCAACCCCAGAGAGCATTTTAAATATCCTGGTCATATCTTTGGATCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR CCA 90 bp | CACATCGCCATTCTCCCCCATCAAACCACAGAAACAAGTTTGTCCACAATTTTTAAGAAAAAGCCTATCTaGTGCCAAAGAAAGAATTCA | + |
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Preference number: 2 (lower is better) Translates to: HIAILPHQTTETSLSTIFKKKPI*CQRKNS Trigger: TGAATTCTTTCTTTGGCACCAGATAGGCTTTTTCTT...AAAAATTGTGGACAAACTTGTTTCTGTGGTTTGATGGGGGAGAATGGCGATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR TCA 72 bp | TGCAGGGGCCTCCAGAGACCACACAACCCCGGAGGCTaGGAAGTGGCGAGGTCTGAGCAGGAAGTGGGTATT | + |
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Preference number: 3 (lower is better) Translates to: CRGLQRPHNPGG*EVARSEQEVGI Trigger: AATACCCACTTCCTGCTCAGACCTCGCCACTTCTCAGCCTCCGGGGTTGTGTGGTCTCTGGAGGCCCCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR CCA 72 bp | TCACTGGTTCCACTGCACTTGATTGTCCCTCTAGGATaGCACAGCAGGGCGTTCCATTCCAAGGGGCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: SLVPLHLIVPLG*HSRAFHSKGPV Trigger: CACTGGCCCCTTGGAATGGAACGCCCTGCTGTGCCATCCTAGAGGGACAATCAAGTGCAGTGGAACCAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR GCA 72 bp | CATCAGTTGGTACTGACGGGGTTTGCAGACTTGCCCTaGAAAGGACCCCTCCATCAGACTCCAATAGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: HQLVLTGFADLP*KGPLHQTPIAA Trigger: GGCTGCTATTGGAGTCTGATGGAGGGGTCCTTTGCAGGGCAAGTCTGCAAACCCCGTCAGTACCAACTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR GCA 72 bp | GATGTTCAAACAACTGGGCTGGCCAGGACTAGTCACTaGAGGTTCACCAGCGAGCAGCTTGGAGGTGAATTC | + |
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Preference number: 3 (lower is better) Translates to: DVQTTGLARTSH*RFTSEQLGGEF Trigger: GAATTCACCTCCAAGCTGCTCGCTGGTGAACCTGCAGTGACTAGTCCTGGCCAGCCCAGTTGTTTGAACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR TCA 72 bp | AGAGTCCCCGTGGCGCCTGCCCTACAAAGGAAGGGGTaGCTGAAGCTTTACGATCCTTTAGCTATTCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: RVPVAPALQRKG*LKLYDPLAILG Trigger: TCCTAGAATAGCTAAAGGATCGTAAAGCTTCAGTCACCCCTTCCTTTGTAGGGCAGGCGCCACGGGGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTATCTCACAGGATAGCTCACCAGCGAGCAGCTaGGAGGTGAATTCTGTGACT | + |
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Preference number: 3 (lower is better) Translates to: AREGYFQIFGDISISQDSSPASS*EVNSVT Trigger: AGTCACAGAATTCACCTCCAAGCTGCTCGCTGGTGA...GCTATCCTGTGAGATAGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR-3UTR CAA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTGCAGGCAGAGGTTATTaGTCTAAACCATCTGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QSFPRAREGYFQIFGDISAGRGY*SKPSGC Trigger: GCAGCCAGATGGTTTAGACAAATAACCTCTGCCTGC...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGACCAGTGTTTCCTTTGGCAGTTATCTGGTCCTTACTCAACAGTTGTTTACGGGGTTTGCAGACTaGCCCTGCAAAGGACCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SQTSVSFGSYLVLTQQLFTGFAD*PCKGPL Trigger: GAGGGGTCCTTTGCAGGGCAAGTCTGCAAACCCCGT...AAACAACTGTTGAGTAAGGACCAGATAACTGCCAAAGGAAACACTGGTCTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR CCA 72 bp | AACTCTTGTATAGGAATGATGTTCAAACAACTGGGCTaGCCAGGACTAGTCACTGCAGGTTCACCAGCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: NSCIGMMFKQLG*PGLVTAGSPAS Trigger: GCTCGCTGGTGAACCTGCAGTGACTAGTCCTGGCCAGCCCAGTTGTTTGAACATCATTCCTATACAAGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR-3UTR CAA 90 bp | GGGGACATTTCTATCTCACAGGATAGCTATTTAAATACACATCGCCATTCTCCCCCCACCCTCACAGCCTaGAGAAAGCCTAGAGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GDISISQDSYLNTHRHSPPTLTA*RKPRVS Trigger: GGAGACTCTAGGCTTTCTCAAGGCTGTGAGGGTGGG...GGGAGAATGGCGATGTGTATTTAAATAGCTATCCTGTGAGATAGAAATGTCCCC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR TCA 72 bp | TATCTGTGCACACAAATTCTACACAGCGCAAACACCTaGATCTGGTGTACTACAGACGGCTGGGCAAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: YLCTQILHSANT*IWCTTDGWASK Trigger: CTTGCTTGCCCAGCCGTCTGTAGTACACCAGATTCAGGTGTTTGCGCTGTGTAGAATTTGTGTGCACAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR CCA 72 bp | GAGTCAGAAGCAAACATAGACAGCAAGCTTCTAACCTaGCATCAGTTGGTACTGACGGGGTTTGCAGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: ESEANIDSKLLT*HQLVLTGFADL Trigger: CAAGTCTGCAAACCCCGTCAGTACCAACTGATGCCAGGTTAGAAGCTTGCTGTCTATGTTTGCTTCTGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR GCA 72 bp | CTGGCAGGCAGAGGTTATTTGTCTAAACCATCTGGCTaGACTCCTACGGCATCTCAGAGTAAACTTTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LAGRGYLSKPSG*TPTASQSKLSR Trigger: TCTTGAAAGTTTACTCTGAGATGCCGTAGGAGTGCAGCCAGATGGTTTAGACAAATAACCTCTGCCTGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR CCA 72 bp | TTTATTTTACAGGAAACCAGAAGTCGAGGCAGAGCGTaGTCACTGGTTCCACTGCACTTGATTGTCCCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: FILQETRSRGRA*SLVPLHLIVPL Trigger: TAGAGGGACAATCAAGTGCAGTGGAACCAGTGACCACGCTCTGCCTCGACTTCTGGTTTCCTGTAAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR CCA 72 bp | GGCATACATTCCAGCAATGTGAAACATGTGACGAAATaGAGCCATCCACTTGGCTGTTCAGAAGTGGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: GIHSSNVKHVTK*SHPLGCSEVGF Trigger: AAATCCCACTTCTGAACAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR-3UTR CAA 90 bp | GGCATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCGAGATTAGGGATTGCTaGAATAAACCACATGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: GIHSSNVKHVTKWSHPLGEIRDC*NKPHDL Trigger: CAGATCATGTGGTTTATTCAAGCAATCCCTAATCTC...GCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTATCTCACAGGATAGCGTCCTTACTCAACAGTaGTTTAAAACTCAAAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: AREGYFQIFGDISISQDSVLTQQ*FKTQNP Trigger: AGGGTTTTGAGTTTTAAACAACTGTTGAGTAAGGAC...GCTATCCTGTGAGATAGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR TCA 72 bp | CTTTACGATCCTTTAGCTATTCTAGGAAAGAGAAGCTaGCACAAACCCCATTCCCTCAAGCTCACATCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LYDPLAILGKRS*HKPHSLKLTSL Trigger: TAGAGATGTGAGCTTGAGGGAATGGGGTTTGTGTCAGCTTCTCTTTCCTAGAATAGCTAAAGGATCGTAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR GCA 72 bp | AAACGCTTGACTACTTGGCAACTGATCCTTTTAGTATaGCCAACTGAACGTAGTCACCTTTCGATTCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: KRLTTWQLILLV*PTERSHLSIHG Trigger: TCCATGAATCGAAAGGTGACTACGTTCAGTTGGGCATACTAAAAGGATCAGTTGCCAAGTAGTCAAGCGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR CCA 72 bp | CAATGTGAAACATGTGACGAAATGGAGCCATCCACTTaGCTGTTCAGAAGTGGGATTTTTACAGCTAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: QCETCDEMEPST*LFRSGIFTARI Trigger: TATTCTAGCTGTAAAAATCCCACTTCTGAACAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR-3UTR CAA 90 bp | CGATCCTTTAGCTATTCTAGGAAAGAGAAGCTGACACAAACCCCATTCCCTCAAAATTCTACACTGCTATaGTCAAACTGTTTTTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RSFSYSRKEKLTQTPFPQNSTLL*SNCFSA Trigger: GGCAGAAAAACAGTTTGACAATAGCAGTGTAGAATT...TTGAGGGAATGGGGTTTGTGTCAGCTTCTCTTTCCTAGAATAGCTAAAGGATCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR CCA 72 bp | ATCCATTTTATAATGGCTGCTAATGAAAGCCAAGAATaGGGTATTACTGACCCGTACCCAGTTTCTAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: IHFIMAANESQE*GITDPYPVSKH Trigger: GTGTTTAGAAACTGGGTACGGGTCAGTAATACCCCATTCTTGGCTTTCATTAGCAGCCATTATAAAATGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR CCA 72 bp | AGACTTCACAGACCAGTGTTTCCTTTGGCAGTTATCTaGTCCTTACTCAACAGTTGTTTAAAACTCAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: RLHRPVFPLAVI*SLLNSCLKLKT Trigger: GGTTTTGAGTTTTAAACAACTGTTGAGTAAGGACCAGATAACTGCCAAAGGAAACACTGGTCTGTGAAGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR TCA 72 bp | GCACATAAGATGACAGGATGGGTCATTTCTCTGAGATaGATGGGGATGTTACTATCTAAACCACAAATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: AHKMTGWVISLR*MGMLLSKPQIH Trigger: ATGAATTTGTGGTTTAGATAGTAACATCCCCATTCATCTCAGAGAAATGACCCATCCTGTCATCTTATGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR CCA 72 bp | AGGCATGAGATAGTAAATTATTCAGAGAACATACACTaGCATACATTCCAGCAATGTGAAACATGTGACGAA | + |
|
Preference number: 3 (lower is better) Translates to: RHEIVNYSENIH*HTFQQCETCDE Trigger: TTCGTCACATGTTTCACATTGCTGGAATGTATGCCAGTGTATGTTCTCTGAATAATTTACTATCTCATGCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | GCCAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTACCTCCTCAGCATCCTaGAGCCTCGTCAGGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARVFRGPGRVTSRSLGTFTSSAS*SLVRCS Trigger: GGAGCACCTGACGAGGCTGCAGGATGCTGAGGAGGT...AAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | CTAGTCACTGCAGGTTCACCAGCGAGCAGCTTGGAGGTGAATTCTGTGACTCTTTGGCCAGTTCCTCGCTaGGGGAGTCCTGGGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVTAGSPASSLEVNSVTLWPVPR*GSPGTL Trigger: AAGAGTCCCAGGACTCCCTCAGCGAGGAACTGGCCA...AAGAGTCACAGAATTCACCTCCAAGCTGCTCGCTGGTGAACCTGCAGTGACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | CTAGTCACTGCAGGTTCACCAGCGAGCAGCTTGGAGGTGAATTCTGTGACTCTTTGCTGGGTAATGGCCTaGGCGGATGGGCTTGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LVTAGSPASSLEVNSVTLCWVMA*ADGLGD Trigger: ATCGCCAAGCCCATCCGCCCAGGCCATTACCCAGCA...AAGAGTCACAGAATTCACCTCCAAGCTGCTCGCTGGTGAACCTGCAGTGACTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | AGGAGAAGGATCCAAGCACGTATCTGTGCACACAAATTCTACACAGCGCAAACAGGATCTCCGCTTCGTTaGGGGGCCGGAACCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RRRIQARICAHKFYTAQTGSPLR*GAGTGT Trigger: TGTGCCGGTTCCGGCCCCTCAACGAAGCGGAGATCC...TGTTTGCGCTGTGTAGAATTTGTGTGCACAGATACGTGCTTGGATCCTTCTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTGACAGCTGTCGGAGATaGTGCTGGGTAATGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSFPRAREGYFQIFGDISDSCRR*CWVMAW Trigger: CCAGGCCATTACCCAGCATCATCTCCGACAGCTGTC...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | GGCATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTCGCTGAGGGAGTCCTaGGACTCTTCCAGCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GIHSSNVKHVTKWSHPLGSLRES*DSSSCR Trigger: GCGGCAGCTGGAAGAGTCCCAGGACTCCCTCAGCGA...GCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTTCTCCCCCAGGTCCTTaGGAAGCAGGTTCAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QSFPRAREGYFQIFGDISSPPGP*EAGSGS Trigger: AGATCCTGAACCTGCTTCTCAAGGACCTGGGGGAGA...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | CTAGTCACTGCAGGTTCACCAGCGAGCAGCTTGGAGGTGAATTCTGTGACTCTTCTTGGCTTCGTGCTGTaGGATAAGCAACTGGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LVTAGSPASSLEVNSVTLLGFVL*DKQLAR Trigger: GCGTGCCAGTTGCTTATCTCACAGCACGAAGCCAAG...AAGAGTCACAGAATTCACCTCCAAGCTGCTCGCTGGTGAACCTGCAGTGACTAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | CTAGTCACTGCAGGTTCACCAGCGAGCAGCTTGGAGGTGAATTCTGTGACTCTTCTCGCACAGCCTCCTTaGTGCGATCTACTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVTAGSPASSLEVNSVTLLAQPP*CDLLPA Trigger: AGCAGGAAGTAGATCGCATCAAGGAGGCTGTGCGAG...AAGAGTCACAGAATTCACCTCCAAGCTGCTCGCTGGTGAACCTGCAGTGACTAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTCGGTGGCTCTCCATCTaGTGCTCCAGAGCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSFPRAREGYFQIFGDISRWLSI*CSRAFF Trigger: GAAGAAAGCTCTGGAGCAGCAGATGGAGAGCCACCG...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTGCCTCTTCTCCAGCTTaGGGAGTTCACAGCGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ARVFRGPGRVTSRSLGTFASSPA*GVHSAN Trigger: ATTTGCGCTGTGAACTCCCCAAGCTGGAGAAGAGGC...AAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR CCA 90 bp | GCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTATCTCACAGGATAGCCCGAATGTGCCCTCCTaGCCATGTTCTTGGCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: AREGYFQIFGDISISQDSPNVPS*PCSWLA Trigger: TGCGAGCCAAGAACATGGCCAGGAGGGCACATTCGG...GCTATCCTGTGAGATAGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | GCCAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCGTGTCGGTTTGCTTTaGCCTCATCGATCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARVFRGPGRVTSRSLGTFRVGLL*PHRSHP Trigger: TGGATGTGATCGATGAGGGCAAAGCAAACCGACACG...AAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | GGCATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCCGAAGTCTGGACAGCTaGTTTTGGTGCGCTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GIHSSNVKHVTKWSHPLGRSLDS*FWCASR Trigger: CCGGGAAGCGCACCAAAAGCAGCTGTCCAGACTTCG...GCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTGTTGCTCGTTGGCCCTaGTCTTGTCCTCCACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSFPRAREGYFQIFGDISVARWP*SCPPLL Trigger: AAGAAGTGGAGGACAAGACCAGGGCCAACGAGCAAC...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | CATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTGCTGGACAGCTGCTTTTaGTGCGCTTCCCGGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTFQQCETCDEMEPSTWLLDSCF*CASRWL Trigger: GAGCCACCGGGAAGCGCACCAAAAGCAGCTGTCCAG...CAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | CTAGTCACTGCAGGTTCACCAGCGAGCAGCTTGGAGGTGAATTCTGTGACTCTTTCTCATCGCGAAGTCTaGACAGCTGCTTTTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LVTAGSPASSLEVNSVTLSHREV*TAAFGA Trigger: CGCACCAAAAGCAGCTGTCCAGACTTCGCGATGAGA...AAGAGTCACAGAATTCACCTCCAAGCTGCTCGCTGGTGAACCTGCAGTGACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTTGGTCTCGGCTTCATTaGAGACTGAAGGAGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSFPRAREGYFQIFGDISWSRLH*RLKENS Trigger: GCTGTTCTCCTTCAGTCTTCAATGAAGCCGAGACCA...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | AAATACACATCGCCATTCTCCCCCATCAAACCACAGAAACAAGTTTGTCCACAAGCTTCTGAGCAGCGCTaGCCCCTCCATCGTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KYTSPFSPIKPQKQVCPQASEQR*PLHRRC Trigger: ACAGCGACGATGGAGGGGGCAGCGCTGCTCAGAAGC...TTGTGGACAAACTTGTTTCTGTGGTTTGATGGGGGAGAATGGCGATGTGTATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | AGGAGAAGGATCCAAGCACGTATCTGTGCACACAAATTCTACACAGCGCAAACATGTGAGATAAGCAACTaGCACGCTGCCAGCTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RRRIQARICAHKFYTAQTCEISN*HAASSR Trigger: GCGCGAGCTGGCAGCGTGCCAGTTGCTTATCTCACA...TGTTTGCGCTGTGTAGAATTTGTGTGCACAGATACGTGCTTGGATCCTTCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | CATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTGCATCGATCACATCCATaGCCTCCTCCGGGCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: HTFQQCETCDEMEPSTWLHRSHP*PPPGLT Trigger: TGTCAAGCCCGGAGGAGGTCATGGATGTGATCGATG...CAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | CACATCGCCATTCTCCCCCATCAAACCACAGAAACAAGTTTGTCCACAATTTTTTCTCCTCCAGTCCCTTaGGGTCCTCCCTGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HIAILPHQTTETSLSTIFSPPVP*GPPWLA Trigger: AGCAAGCCAGGGAGGACCTCAAGGGACTGGAGGAGA...AAAAATTGTGGACAAACTTGTTTCTGTGGTTTGATGGGGGAGAATGGCGATGTG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAACGGAAACTGTATAGGAGGGGACAGAAAGGAACTGGTGACTACTACAGACAGCTGCTTTTGGTaGGCTTCCCGGTGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRNGNCIGGDRKELVTTTDSCFW*ASRWLS Trigger: GGAGAGCCACCGGGAAGCGCACCAAAAGCAGCTGTC...TGTAGTAGTCACCAGTTCCTTTCTGTCCCCTCCTATACAGTTTCCGTTTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAACGGAAACTGTATAGGAGGGGACAGAAAGGAACTGGTGACTACTACAGCTCCTGGGTTGTGTTaGGCGGCAGCACTCGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KRNGNCIGGDRKELVTTTAPGLC*AAALGQ Trigger: TTGACCGAGTGCTGCCGCCCAACACAACCCAGGAGC...TGTAGTAGTCACCAGTTCCTTTCTGTCCCCTCCTATACAGTTTCCGTTTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | CATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTGGCCTCATTTTCGATCTaGAGGCGTGTCAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTFQQCETCDEMEPSTWLASFSI*RRVSSS Trigger: GGAGGAGCTGACACGCCTCCAGATCGAAAATGAGGC...CAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | GCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTATCTCACAGGATAGCTCATGGCATTCTCCTTaGCCTCTTTCAGCGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AREGYFQIFGDISISQDSSWHSP*PLSAHS Trigger: AGAGTGCGCTGAAAGAGGCCAAGGAGAATGCCATGA...GCTATCCTGTGAGATAGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR CAA 72 bp | CCAGGACTAGTCACTGCAGGTTCACCAGCGAGCAGCTaGGAGGTGAATTCTGTGACTCTTCGCATTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: PGLVTAGSPASS*EVNSVTLRIFI Trigger: TATGAAAATGCGAAGAGTCACAGAATTCACCTCCAAGCTGCTCGCTGGTGAACCTGCAGTGACTAGTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR CAA 72 bp | GCAAACATAGACAGCAAGCTTCTAACCTGGCATCAGTaGGTACTGACGGGGTTTGCAGACTTGCCCTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ANIDSKLLTWHQ*VLTGFADLPCK Trigger: TTTGCAGGGCAAGTCTGCAAACCCCGTCAGTACCAACTGATGCCAGGTTAGAAGCTTGCTGTCTATGTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTCAGAGACTGTATTCTTaGTGGTCTTTGCTCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QSFPRAREGYFQIFGDISQRLYS*WSLLSV Trigger: GACAGAGAGCAAAGACCATCAAGAATACAGTCTCTG...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | CATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTGGCCAGGAGCTCATCCTaGTCCAACATCTGTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTFQQCETCDEMEPSTWLARSSS*SNICCF Trigger: GAAGCAACAGATGTTGGATCAGGATGAGCTCCTGGC...CAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | CATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTGAGCCACGTGTCGGTTTaGTTTGCCCTCATCGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTFQQCETCDEMEPSTWLSHVSV*FALIDH Trigger: GTGATCGATGAGGGCAAAGCAAACCGACACGTGGCT...CAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | GGCATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCAGCTCCATCTCCAGATaGTGGAGGACACTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GIHSSNVKHVTKWSHPLGSSISR*WRTLFK Trigger: CTTGAAGAGTGTCCTCCAGCATCTGGAGATGGAGCT...GCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | CATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTGAGGTCCTCCCTGGCTTaGTCCCTTTTGTCATTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTFQQCETCDEMEPSTWLRSSLA*SLLSLS Trigger: GCTCAATGACAAAAGGGAGCAAGCCAGGGAGGACCT...CAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | CATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTGCCACCCAGAGAGTCCTaGAGAATCCGAGTCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTFQQCETCDEMEPSTWLPPRES*RIRVIL Trigger: CAAGATGACTCGGATTCTCCAGGACTCTCTGGGTGG...CAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTGCCAGCTGGCTCTGCTaGTTAATTTCATCATCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QSFPRAREGYFQIFGDISASWLC*LISSSL Trigger: TAAGGATGATGAAATTAACCAGCAGAGCCAGCTGGC...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | CATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTGAGTCTGTCAGAGACTTaGTCTTGGCTTCGTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HTFQQCETCDEMEPSTWLSLSET*SWLRAV Trigger: CACAGCACGAAGCCAAGATCAAGTCTCTGACAGACT...CAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | CATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTGGTTTTCGGTCCCTCATaGCATTCTCCTTGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HTFQQCETCDEMEPSTWLVFGPS*HSPWPL Trigger: AAGAGGCCAAGGAGAATGCCATGAGGGACCGAAAAC...CAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | AAATACACATCGCCATTCTCCCCCATCAAACCACAGAAACAAGTTTGTCCACAAACCGGCACATCACTTTaGTGCTGCATTCGGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KYTSPFSPIKPQKQVCPQTGTSL*CCIRLD Trigger: ATCCAGCCGAATGCAGCATCAAAGTGATGTGCCGGT...TTGTGGACAAACTTGTTTCTGTGGTTTGATGGGGGAGAATGGCGATGTGTATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | AGGAGAAGGATCCAAGCACGTATCTGTGCACACAAATTCTACACAGCGCAAACAGTCCTCCACTTCTTGTaGCTTCTGGTCGTAATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRRIQARICAHKFYTAQTVLHFL*LLVVID Trigger: GTCAATTACGACCAGAAGTCACAAGAAGTGGAGGAC...TGTTTGCGCTGTGTAGAATTTGTGTGCACAGATACGTGCTTGGATCCTTCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | TCACAGACCAGTGTTTCCTTTGGCAGTTATCTGGTCCTTACTCAACAGTTGTTTGGTTCACGAGAGACTTaGCCTCCGACTTCATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQTSVSFGSYLVLTQQLFGSRET*PPTSSC Trigger: GCAAGATGAAGTCGGAGGTCAAGTCTCTCGTGAACC...AAACAACTGTTGAGTAAGGACCAGATAACTGCCAAAGGAAACACTGGTCTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | CATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTGCCCGGATCTCATCAATaGTTCTCTGCTTCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTFQQCETCDEMEPSTWLPGSHQ*FSASPQ Trigger: TTGAGGAGAAGCAGAGAATCATTGATGAGATCCGGG...CAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | AGGAGAAGGATCCAAGCACGTATCTGTGCACACAAATTCTACACAGCGCAAACAGCTCCCTTTTGTCATTaGGCAATAGGAGCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRRIQARICAHKFYTAQTAPFCH*AIGASP Trigger: TGGAGAAGCTCCTATTGCTCAATGACAAAAGGGAGC...TGTTTGCGCTGTGTAGAATTTGTGTGCACAGATACGTGCTTGGATCCTTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | TCACAGACCAGTGTTTCCTTTGGCAGTTATCTGGTCCTTACTCAACAGTTGTTTGTAGTGAGTAGAGTTTaGAGAGCCACCTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQTSVSFGSYLVLTQQLFVVSRV*RATSSS Trigger: GGAGGAGGAGGTGGCTCTTCAAACTCTACTCACTAC...AAACAACTGTTGAGTAAGGACCAGATAACTGCCAAAGGAAACACTGGTCTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | AGGAGAAGGATCCAAGCACGTATCTGTGCACACAAATTCTACACAGCGCAAACATCAGCCAGCTGGCTCTaGTGGTTAATTTCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RRRIQARICAHKFYTAQTSASWL*WLISSS Trigger: GGATGATGAAATTAACCAGCAGAGCCAGCTGGCTGA...TGTTTGCGCTGTGTAGAATTTGTGTGCACAGATACGTGCTTGGATCCTTCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAACGGAAACTGTATAGGAGGGGACAGAAAGGAACTGGTGACTACTACAGCTAATGTACAGGCGTaGCATGGTGAACTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRNGNCIGGDRKELVTTTANVQA*HGELLL Trigger: GAGGAGGAGTTCACCATGGCACGCCTGTACATTAGC...TGTAGTAGTCACCAGTTCCTTTCTGTCCCCTCCTATACAGTTTCCGTTTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | GAAAGGACTATACAACAGAATCCTGGAGGTAATATACACAGCCATCAACATTTCTGGGCACTCTCCAGCTaGTTGCTGCGGTTCACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERTIQQNPGGNIHSHQHFWALSS*LLRFTR Trigger: TCTCGTGAACCGCAGCAAGCAGCTGGAGAGTGCCCA...GAAATGTTGATGGCTGTGTATATTACCTCCAGGATTCTGTTGTATAGTCCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | TCACAGACCAGTGTTTCCTTTGGCAGTTATCTGGTCCTTACTCAACAGTTGTTTTTCACAGCGCAAATCTaGATTGTCCCGGACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQTSVSFGSYLVLTQQLFFTAQI*IVPDQL Trigger: CAGCTGGTCCGGGACAATGCAGATTTGCGCTGTGAA...AAACAACTGTTGAGTAAGGACCAGATAACTGCCAAAGGAAACACTGGTCTGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | GCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTATCTCACAGGATAGCGTAACTTCCCCTCCATaGTATGAGTTTTTCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AREGYFQIFGDISISQDSVTSPP*YEFFLM Trigger: CATCAGGAAAAACTCATACCATGGAGGGGAAGTTAC...GCTATCCTGTGAGATAGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAACGGAAACTGTATAGGAGGGGACAGAAAGGAACTGGTGACTACTACATCCATCTCCAGATGCTaGAGGACACTCTTCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRNGNCIGGDRKELVTTTSISRC*RTLFKA Trigger: GGCCTTGAAGAGTGTCCTCCAGCATCTGGAGATGGA...TGTAGTAGTCACCAGTTCCTTTCTGTCCCCTCCTATACAGTTTCCGTTTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | CACATCGCCATTCTCCCCCATCAAACCACAGAAACAAGTTTGTCCACAATTTTTCTGTTAGAGTCCATCTaGGCACTCTCCAGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HIAILPHQTTETSLSTIFLLESI*ALSSCL Trigger: CAAGCAGCTGGAGAGTGCCCAGATGGACTCTAACAG...AAAAATTGTGGACAAACTTGTTTCTGTGGTTTGATGGGGGAGAATGGCGATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| 3UTR CAA 72 bp | CGACTCACTGAAGCCTGCCAGTTTCTCTTGAAACGCTaGACTACTTGGCAACTGATCCTTTTAGTATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLTEACQFLLKR*TTWQLILLVCP Trigger: TGGGCATACTAAAAGGATCAGTTGCCAAGTAGTCAAGCGTTTCAAGAGAAACTGGCAGGCTTCAGTGAGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR TCA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTCAAAATAGGAAACCTTaGTATGAAACTCCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSFPRAREGYFQIFGDISQNRKP*YETPGS Trigger: AGAACCTGGAGTTTCATATCAAGGTTTCCTATTTTG...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR TCA 90 bp | TACAGATCCAAAGATATGACCAGGATATTTAAAATGCTCTCTGGGGTTGGTTTTTCTGGTCCTTGGCGCTaGTCTGTTCGTCCTCGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YRSKDMTRIFKMLSGVGFSGPWR*SVRPRV Trigger: TACCCGAGGACGAACAGATCAGCGCCAAGGACCAGA...AAAACCAACCCCAGAGAGCATTTTAAATATCCTGGTCATATCTTTGGATCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR TCA 90 bp | TACAGATCCAAAGATATGACCAGGATATTTAAAATGCTCTCTGGGGTTGGTTTTCTAAGCTCTTGCAGCTaGCTCAGCTCTCGCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YRSKDMTRIFKMLSGVGFLSSCS*LSSRWV Trigger: CACCCAGCGAGAGCTGAGTCAGCTGCAAGAGCTTAG...AAAACCAACCCCAGAGAGCATTTTAAATATCCTGGTCATATCTTTGGATCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR GCA 90 bp | GGGGACATTTCTATCTCACAGGATAGCTATTTAAATACACATCGCCATTCTCCCGAATCCGAGTCATCTTaGTGTCCCGGTACGGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: GDISISQDSYLNTHRHSPESESS*CPGTVH Trigger: ATGTACCGTACCGGGACAGCAAGATGACTCGGATTC...GGGAGAATGGCGATGTGTATTTAAATAGCTATCCTGTGAGATAGAAATGTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR GCA 90 bp | AAAAGAAACGGAAACTGTATAGGAGGGGACAGAAAGGAACTGGTGACTACTACAGACCCCGTTCACATCTaGCAGAGTCTTCACATCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRNGNCIGGDRKELVTTTDPVHI*QSLHIV Trigger: AACGATGTGAAGACTCTGGCAGATGTGAACGGGGTC...TGTAGTAGTCACCAGTTCCTTTCTGTCCCCTCCTATACAGTTTCCGTTTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR CCA 90 bp | CACATCGCCATTCTCCCCCATCAAACCACAGAAACAAGTTTGTCCACAATTTTTCTGCCAAGTTGGTCTTaGACACATCAAGCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HIAILPHQTTETSLSTIFLPSWS*THQASP Trigger: GGGACTTGCTTGATGTGTCCAAGACCAACTTGGCAG...AAAAATTGTGGACAAACTTGTTTCTGTGGTTTGATGGGGGAGAATGGCGATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | GGGGACATTTCTATCTCACAGGATAGCTATTTAAATACACATCGCCATTCTCCCAGTGTCGTCGTTTTCTaGGCCAGCTCATCAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GDISISQDSYLNTHRHSPSVVVF*ASSSVS Trigger: ACTGACTGATGAGCTGGCCCAGAAAACGACGACACT...GGGAGAATGGCGATGTGTATTTAAATAGCTATCCTGTGAGATAGAAATGTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAACGGAAACTGTATAGGAGGGGACAGAAAGGAACTGGTGACTACTACAGGTTCAGGATCTCTGTaGCCCTCTTTTTCTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KRNGNCIGGDRKELVTTTGSGSL*PSFSGG Trigger: ACCACCAGAAAAAGAGGGCCACAGAGATCCTGAACC...TGTAGTAGTCACCAGTTCCTTTCTGTCCCCTCCTATACAGTTTCCGTTTCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAACGGAAACTGTATAGGAGGGGACAGAAAGGAACTGGTGACTACTACAGTCGGTACAAACTGGTaGTCTCCTCGTCATACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRNGNCIGGDRKELVTTTVGTNW*SPRHTS Trigger: AGAAGTATGACGAGGAGATCACCAGTTTGTACCGAC...TGTAGTAGTCACCAGTTCCTTTCTGTCCCCTCCTATACAGTTTCCGTTTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAACGGAAACTGTATAGGAGGGGACAGAAAGGAACTGGTGACTACTACAAGTTTGCGCAGGTTATaGAGGGTCTGGAGTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KRNGNCIGGDRKELVTTTSLRRL*RVWSSL Trigger: TAGAGAACTCCAGACCCTTCATAACCTGCGCAAACT...TGTAGTAGTCACCAGTTCCTTTCTGTCCCCTCCTATACAGTTTCCGTTTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | GGGGACATTTCTATCTCACAGGATAGCTATTTAAATACACATCGCCATTCTCCCAAGGAGAACAGCAAATaGCAATGGTGGTCCTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GDISISQDSYLNTHRHSPKENSK*QWWSYS Trigger: ACTGTAGGACCACCATTGTCATTTGCTGTTCTCCTT...GGGAGAATGGCGATGTGTATTTAAATAGCTATCCTGTGAGATAGAAATGTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | GGGGACATTTCTATCTCACAGGATAGCTATTTAAATACACATCGCCATTCTCCCTGTTATAATCAGAGCTaGGCCTCTCCTGTTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GDISISQDSYLNTHRHSPCYNQS*ASPVPV Trigger: AACTGGAACAGGAGAGGCTCAGCTCTGATTATAACA...GGGAGAATGGCGATGTGTATTTAAATAGCTATCCTGTGAGATAGAAATGTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | AGGAGAAGGATCCAAGCACGTATCTGTGCACACAAATTCTACACAGCGCAAACAATTCTTGATGGTCTTTaGTCTCTGTCCAAACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRRIQARICAHKFYTAQTILDGL*SLSKHQ Trigger: CTGATGTTTGGACAGAGAGCAAAGACCATCAAGAAT...TGTTTGCGCTGTGTAGAATTTGTGTGCACAGATACGTGCTTGGATCCTTCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | TACAGATCCAAAGATATGACCAGGATATTTAAAATGCTCTCTGGGGTTGGTTTTGATCTGAGCCGAATGTaGCCTCCTGGCCATGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YRSKDMTRIFKMLSGVGFDLSRM*PPGHVL Trigger: AAGAACATGGCCAGGAGGGCACATTCGGCTCAGATC...AAAACCAACCCCAGAGAGCATTTTAAATATCCTGGTCATATCTTTGGATCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAACGGAAACTGTATAGGAGGGGACAGAAAGGAACTGGTGACTACTACATTCACTTCTCTCTCCTaGTCCTCTATTTTCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRNGNCIGGDRKELVTTTFTSLS*SSIFSL Trigger: CAAGCTGAAAATAGAGGACCAGGAGAGAGAAGTGAA...TGTAGTAGTCACCAGTTCCTTTCTGTCCCCTCCTATACAGTTTCCGTTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR TCA 90 bp | GAAAGGACTATACAACAGAATCCTGGAGGTAATATACACAGCCATCAACATTTCTCCAGTTGCAGTTTCTaGTTCAAATCCCGGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERTIQQNPGGNIHSHQHFSSCSF*FKSRIS Trigger: TGAGATCCGGGATTTGAATCAGAAACTGCAACTGGA...GAAATGTTGATGGCTGTGTATATTACCTCCAGGATTCTGTTGTATAGTCCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | GAAAGGACTATACAACAGAATCCTGGAGGTAATATACACAGCCATCAACATTTCAGCTTTTCAGCCAGCTaGCTCTGCTGGTTAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERTIQQNPGGNIHSHQHFSFSAS*LCWLIS Trigger: TGAAATTAACCAGCAGAGCCAGCTGGCTGAAAAGCT...GAAATGTTGATGGCTGTGTATATTACCTCCAGGATTCTGTTGTATAGTCCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CCA 90 bp | CGATCCTTTAGCTATTCTAGGAAAGAGAAGCTGACACAAACCCCATTCCCTCAATCCTTTTCCTTATCTTaGAAACTGACTTCGTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: RSFSYSRKEKLTQTPFPQSFSLS*KLTSCI Trigger: AATGCACGAAGTCAGTTTCCAAGATAAGGAAAAGGA...TTGAGGGAATGGGGTTTGTGTCAGCTTCTCTTTCCTAGAATAGCTAAAGGATCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | TCACAGACCAGTGTTTCCTTTGGCAGTTATCTGGTCCTTACTCAACAGTTGTTTGTCTCCACATTCTCTTaGTTAATGTTAATCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQTSVSFGSYLVLTQQLFVSTFS*LMLIRK Trigger: CTTCCTGATTAACATTAAGCAAGAGAATGTGGAGAC...AAACAACTGTTGAGTAAGGACCAGATAACTGCCAAAGGAAACACTGGTCTGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | TCACAGACCAGTGTTTCCTTTGGCAGTTATCTGGTCCTTACTCAACAGTTGTTTTTTCCTGATGAAGTCTaGCCATATGCAAAAATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQTSVSFGSYLVLTQQLFFPDEV*PYAKIV Trigger: AACAATTTTTGCATATGGGCAGACTTCATCAGGAAA...AAACAACTGTTGAGTAAGGACCAGATAACTGCCAAAGGAAACACTGGTCTGTGA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| 3UTR CAA 72 bp | GTTTCCTTTGGCAGTTATCTGGTCCTTACTCAACAGTaGTTTAAAACTCAAAACCCTGTTAGGAAGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSFGSYLVLTQQ*FKTQNPVRKQF Trigger: AAACTGCTTCCTAACAGGGTTTTGAGTTTTAAACAACTGTTGAGTAAGGACCAGATAACTGCCAAAGGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR GCA 90 bp | TACAGATCCAAAGATATGACCAGGATATTTAAAATGCTCTCTGGGGTTGGTTTTTCATCAATGATTCTCTaGTTCTCCTCAATCTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: YRSKDMTRIFKMLSGVGFSSMIL*FSSISS Trigger: CGATGAGATTGAGGAGAAGCAGAGAATCATTGATGA...AAAACCAACCCCAGAGAGCATTTTAAATATCCTGGTCATATCTTTGGATCTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS TCA 90 bp | AGAGCCACCTCCTCCTCCTCGGACGGCATGGACAGCTGTCGGAGATaGTGCTGGGTAATGGCCTGGGCGGATGGGCTTGGCGATCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RATSSSSDGMDSCRR*CWVMAWADGLGDLS Trigger: GCTCAGATCGCCAAGCCCATCCGCCCAGGCCATTACCCAGCATCATCTCCGACAGCTGTCCATGCCGTCCGAGGAGGAGGAGGTGGCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS TCA 90 bp | TGGGTGTGTTGTCACAGGGCTCTAGGCTCTTCTGGTCCTTGGCGCTaGTCTGTTCGTCCTCGGGTACAGCTTCCCCGTTCCTCCACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WVCCHRALGSSGPWR*SVRPRVQLPRSSTC Trigger: ACAGGTGGAGGAACGGGGAAGCTGTACCCGAGGACGAACAGATCAGCGCCAAGGACCAGAAGAGCCTAGAGCCCTGTGACAACACACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
||
| CDS CCA 90 bp | GCCAGCTCGCGCTCACTGGCGTTCATCTTCCTGTTAGAGTCCATCTaGGCACTCTCCAGCTGCTTGCTGCGGTTCACGAGAGACTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: ASSRSLAFIFLLESI*ALSSCLLRFTRDLT Trigger: GGTCAAGTCTCTCGTGAACCGCAGCAAGCAGCTGGAGAGTGCCCAGATGGACTCTAACAGGAAGATGAACGCCAGTGAGCGCGAGCTGGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTAGGATCTCCGCTTCGTaGAGGGGCCGGAACCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QSFPRAREGYFQIFGDISRISAS*RGRNRH Trigger: GTGCCGGTTCCGGCCCCTCAACGAAGCGGAGATCCT...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS CCA 90 bp | CAATCTGCTTTGCACAGGCATTGTAGACCTGCTCCTGGGTTGTGTTaGGCGGCAGCACTCGGTCAAAGACATACGGCTTCCCTTGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: QSALHRHCRPAPGLC*AAALGQRHTASLAR Trigger: TCGGGCAAGGGAAGCCGTATGTCTTTGACCGAGTGCTGCCGCCCAACACAACCCAGGAGCAGGTCTACAATGCCTGTGCAAAGCAGATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS GCA 90 bp | GTTGTGTTGGGCGGCAGCACTCGGTCAAAGACATACGGCTTCCCTTaGCCGATCACCACCGTCTCCTCGCCTTTGAATTTGGGGATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VVLGGSTRSKTYGFP*PITTVSSPLNLGMN Trigger: ATTCATCCCCAAATTCAAAGGCGAGGAGACGGTGGTGATCGGGCAAGGGAAGCCGTATGTCTTTGACCGAGTGCTGCCGCCCAACACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS CCA 90 bp | ATGTTGTCTATGATGGGTGTGTTGTCACAGGGCTCTAGGCTCTTCTaGTCCTTGGCGCTGATCTGTTCGTCCTCGGGTACAGCTTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: MLSMMGVLSQGSRLF*SLALICSSSGTASP Trigger: CGGGGAAGCTGTACCCGAGGACGAACAGATCAGCGCCAAGGACCAGAAGAGCCTAGAGCCCTGTGACAACACACCCATCATAGACAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTCTCCTGGCCATGTTCTaGGCTCGCACAGCCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QSFPRAREGYFQIFGDISLLAMF*ARTASL Trigger: CAAGGAGGCTGTGCGAGCCAAGAACATGGCCAGGAG...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS GCA 90 bp | GTGGTTGTCAGTGTCGTCGTTTTCTGGGCCAGCTCATCAGTCAGTTaGTCGTTGGCCCTGGTCTTGTCCTCCACTTCTTGTGACTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVVSVVVFWASSSVS*SLALVLSSTSCDFW Trigger: CCAGAAGTCACAAGAAGTGGAGGACAAGACCAGGGCCAACGAGCAACTGACTGATGAGCTGGCCCAGAAAACGACGACACTGACAACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS GCA 90 bp | CTGGCGTTCATCTTCCTGTTAGAGTCCATCTGGGCACTCTCCAGCTaGTTGCTGCGGTTCACGAGAGACTTGACCTCCGACTTCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LAFIFLLESIWALSS*LLRFTRDLTSDFIL Trigger: CAAGATGAAGTCGGAGGTCAAGTCTCTCGTGAACCGCAGCAAGCAGCTGGAGAGTGCCCAGATGGACTCTAACAGGAAGATGAACGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | GCCAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTATCTCCCCCAGGTCCTaGAGAAGCAGGTTCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: ARVFRGPGRVTSRSLGTFISPRS*RSRFRI Trigger: GATCCTGAACCTGCTTCTCAAGGACCTGGGGGAGAT...AAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS CCA 90 bp | GGAGGCGTGTCAGCTCCTCCTGGATCTTCTCATAGTCCCTTCTCGTaGAAGCCAGGAGTTTCTGTTCTACATGGACTCTTGAGGGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GGVSAPPGSSHSPFS*KPGVSVLHGLLRAH Trigger: ATGAGCCCTCAAGAGTCCATGTAGAACAGAAACTCCTGGCTTCCACGAGAAGGGACTATGAGAAGATCCAGGAGGAGCTGACACGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146247.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGAAACGGAAACTGTATAGGAGGGGACAGAAAGGAACTGGTGACTACTACATCCTGGGCCCGGAGCTaGGCCAGTTCCTCGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KRNGNCIGGDRKELVTTTSWARS*ASSSLR Trigger: CCTCAGCGAGGAACTGGCCAAGCTCCGGGCCCAGGA...TGTAGTAGTCACCAGTTCCTTTCTGTCCCCTCCTATACAGTTTCCGTTTCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS TCA 90 bp | ATCTCTGTGGCCCTCTTTTTCTGGTGGTTACTAAGCTCTTGCAGCTaGCTCAGCTCTCGCTGGGTGGTTGTCAGTGTCGTCGTTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ISVALFFWWLLSSCS*LSSRWVVVSVVVFW Trigger: CCAGAAAACGACGACACTGACAACCACCCAGCGAGAGCTGAGTCAGCTGCAAGAGCTTAGTAACCACCAGAAAAAGAGGGCCACAGAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTACGTGTCGGTTTGCTTaGCCCTCATCGATCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: QSFPRAREGYFQIFGDISTCRFA*PSSITS Trigger: GGATGTGATCGATGAGGGCAAAGCAAACCGACACGT...AGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | CTAGTCACTGCAGGTTCACCAGCGAGCAGCTTGGAGGTGAATTCTGTGACTCTTTCTATGATGGGTGTGTaGTCACAGGGCTCTAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVTAGSPASSLEVNSVTLSMMGV*SQGSRL Trigger: GAGCCTAGAGCCCTGTGACAACACACCCATCATAGA...AAGAGTCACAGAATTCACCTCCAAGCTGCTCGCTGGTGAACCTGCAGTGACTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR CAA 90 bp | AGGAGAAGGATCCAAGCACGTATCTGTGCACACAAATTCTACACAGCGCAAACATCTGGACAGCTGCTTTaGGTGCGCTTCCCGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRRIQARICAHKFYTAQTSGQLL*VRFPVA Trigger: AGCCACCGGGAAGCGCACCAAAAGCAGCTGTCCAGA...TGTTTGCGCTGTGTAGAATTTGTGTGCACAGATACGTGCTTGGATCCTTCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | CTAGTCACTGCAGGTTCACCAGCGAGCAGCTTGGAGGTGAATTCTGTGACTCTTAGCTGCTTGTGCACCTaGGTAAGCTGTTCCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVTAGSPASSLEVNSVTLSCLCT*VSCSRL Trigger: CAACCTGGAACAGCTTACCAAGGTGCACAAGCAGCT...AAGAGTCACAGAATTCACCTCCAAGCTGCTCGCTGGTGAACCTGCAGTGACTAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS TCA 90 bp | GAAGCCAGGAGTTTCTGTTCTACATGGACTCTTGAGGGCTCATCCTaGTCCAACATCTGTTGCTTCAGCTTTTCAGCCAGCTGGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EARSFCSTWTLEGSS*SNICCFSFSASWLC Trigger: GCAGAGCCAGCTGGCTGAAAAGCTGAAGCAACAGATGTTGGATCAGGATGAGCCCTCAAGAGTCCATGTAGAACAGAAACTCCTGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146247.2 |
||
| CDS GCA 90 bp | GGTACAGCTTCCCCGTTCCTCCACCTGTTCAGCTCCATCTCCAGATaGTGGAGGACACTCTTCAAGGCCTTGTTCTTCTCTTTCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GTASPFLHLFSSISR*WRTLFKALFFSFSF Trigger: AAAAGAGAAAGAGAAGAACAAGGCCTTGAAGAGTGTCCTCCAGCATCTGGAGATGGAGCTGAACAGGTGGAGGAACGGGGAAGCTGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
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| CDS-3UTR CAA 90 bp | CGATCCTTTAGCTATTCTAGGAAAGAGAAGCTGACACAAACCCCATTCCCTCAAGCACTCTCCAGCTGCTaGCTGCGGTTCACGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RSFSYSRKEKLTQTPFPQALSSC*LRFTRD Trigger: GTCTCTCGTGAACCGCAGCAAGCAGCTGGAGAGTGC...TTGAGGGAATGGGGTTTGTGTCAGCTTCTCTTTCCTAGAATAGCTAAAGGATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS CCA 90 bp | ACAGCTTCCCCGTTCCTCCACCTGTTCAGCTCCATCTCCAGATGCTaGAGGACACTCTTCAAGGCCTTGTTCTTCTCTTTCTCTTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TASPFLHLFSSISRC*RTLFKALFFSFSFS Trigger: TGAAAAAGAGAAAGAGAAGAACAAGGCCTTGAAGAGTGTCCTCCAGCATCTGGAGATGGAGCTGAACAGGTGGAGGAACGGGGAAGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
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| CDS-3UTR CAA 90 bp | GGCATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCAACCGGCACATCACTTaGATGCTGCATTCGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GIHSSNVKHVTKWSHPLGNRHIT*MLHSAG Trigger: TCCAGCCGAATGCAGCATCAAAGTGATGTGCCGGTT...GCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR CAA 90 bp | AGGAGAAGGATCCAAGCACGTATCTGTGCACACAAATTCTACACAGCGCAAACAGAGGTCCTCCCTGGCTaGCTCCCTTTTGTCATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RRRIQARICAHKFYTAQTEVLPG*LPFVIE Trigger: CTCAATGACAAAAGGGAGCAAGCCAGGGAGGACCTC...TGTTTGCGCTGTGTAGAATTTGTGTGCACAGATACGTGCTTGGATCCTTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR CAA 90 bp | AGGAGAAGGATCCAAGCACGTATCTGTGCACACAAATTCTACACAGCGCAAACAAATTTGGGGATGAATTaGTCCCCGCGGAGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRRIQARICAHKFYTAQTNLGMN*SPRRIS Trigger: GGAGATCCTCCGCGGGGACAAATTCATCCCCAAATT...TGTTTGCGCTGTGTAGAATTTGTGTGCACAGATACGTGCTTGGATCCTTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR CAA 90 bp | AAATACACATCGCCATTCTCCCCCATCAAACCACAGAAACAAGTTTGTCCACAACCCTCGGCACCGGTTTaGCTGACCTTTTCACTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KYTSPFSPIKPQKQVCPQPSAPV*LTFSLP Trigger: TGGGAGTGAAAAGGTCAGCAAAACCGGTGCCGAGGG...TTGTGGACAAACTTGTTTCTGTGGTTTGATGGGGGAGAATGGCGATGTGTATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR CAA 90 bp | GGGGACATTTCTATCTCACAGGATAGCTATTTAAATACACATCGCCATTCTCCCTCAGTCAGTTGCTCGTaGGCCCTGGTCTTGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GDISISQDSYLNTHRHSPSVSCS*ALVLSS Trigger: GGAGGACAAGACCAGGGCCAACGAGCAACTGACTGA...GGGAGAATGGCGATGTGTATTTAAATAGCTATCCTGTGAGATAGAAATGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR CAA 90 bp | CATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCTGACCTCCGACTTCATCTaGCTAATGTACAGGCGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HTFQQCETCDEMEPSTWLTSDFI*LMYRRA Trigger: GGCACGCCTGTACATTAGCAAGATGAAGTCGGAGGT...CAGCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR CAA 90 bp | AGGAGAAGGATCCAAGCACGTATCTGTGCACACAAATTCTACACAGCGCAAACACGGTTCACGAGAGACTaGACCTCCGACTTCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRRIQARICAHKFYTAQTRFTRD*TSDFIL Trigger: CAAGATGAAGTCGGAGGTCAAGTCTCTCGTGAACCG...TGTTTGCGCTGTGTAGAATTTGTGTGCACAGATACGTGCTTGGATCCTTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR CAA 90 bp | GGCATACATTCCAGCAATGTGAAACATGTGACGAAATGGAGCCATCCACTTGGCACCGTCTCCTCGCCTTaGAATTTGGGGATGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: GIHSSNVKHVTKWSHPLGTVSSP*NLGMNL Trigger: CAAATTCATCCCCAAATTCAAAGGCGAGGAGACGGT...GCCAAGTGGATGGCTCCATTTCGTCACATGTTTCACATTGCTGGAATGTATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR CAA 90 bp | CACATCGCCATTCTCCCCCATCAAACCACAGAAACAAGTTTGTCCACAATTTTTCAGCCACGTGTCGGTTaGCTTTGCCCTCATCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: HIAILPHQTTETSLSTIFQPRVG*LCPHRS Trigger: TGATCGATGAGGGCAAAGCAAACCGACACGTGGCTG...AAAAATTGTGGACAAACTTGTTTCTGTGGTTTGATGGGGGAGAATGGCGATGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR CAA 90 bp | AAAAGAAACGGAAACTGTATAGGAGGGGACAGAAAGGAACTGGTGACTACTACATCGTTGGCCCTGGTCTaGTCCTCCACTTCTTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KRNGNCIGGDRKELVTTTSLALV*SSTSCD Trigger: GTCACAAGAAGTGGAGGACAAGACCAGGGCCAACGA...TGTAGTAGTCACCAGTTCCTTTCTGTCCCCTCCTATACAGTTTCCGTTTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | GCCAGAGTTTTCCGAGGGCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTAGTCTCCACATTCTCTaGCTTAATGTTAATCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ARVFRGPGRVTSRSLGTFSLHIL*LNVNQE Trigger: TTCCTGATTAACATTAAGCAAGAGAATGTGGAGACT...AAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGCCCTCGGAAAACTCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | GGGGACATTTCTATCTCACAGGATAGCTATTTAAATACACATCGCCATTCTCCCAGAATCCGAGTCATCTaGCTGTCCCGGTACGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: GDISISQDSYLNTHRHSPRIRVI*LSRYGT Trigger: TGTACCGTACCGGGACAGCAAGATGACTCGGATTCT...GGGAGAATGGCGATGTGTATTTAAATAGCTATCCTGTGAGATAGAAATGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | AGGAGAAGGATCCAAGCACGTATCTGTGCACACAAATTCTACACAGCGCAAACATTGGTCTCGGCTTCATaGAAGACTGAAGGAGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: RRRIQARICAHKFYTAQTLVSAS*KTEGEQ Trigger: CTGTTCTCCTTCAGTCTTCAATGAAGCCGAGACCAA...TGTTTGCGCTGTGTAGAATTTGTGTGCACAGATACGTGCTTGGATCCTTCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | GCCAGGGAGGGTTACTTCCAGATCTTTGGGGACATTTCTATCTCACAGGATAGCACAGAGACTGTATTCTaGATGGTCTTTGCTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AREGYFQIFGDISISQDSTETVF*MVFALC Trigger: ACAGAGAGCAAAGACCATCAAGAATACAGTCTCTGT...GCTATCCTGTGAGATAGAAATGTCCCCAAAGATCTGGAAGTAACCCTCCCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | GAAAGGACTATACAACAGAATCCTGGAGGTAATATACACAGCCATCAACATTTCAGGCTCTTCTGGTCCTaGGCGCTGATCTGTTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ERTIQQNPGGNIHSHQHFRLFWS*ALICSS Trigger: GGACGAACAGATCAGCGCCAAGGACCAGAAGAGCCT...GAAATGTTGATGGCTGTGTATATTACCTCCAGGATTCTGTTGTATAGTCCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | GGGGACATTTCTATCTCACAGGATAGCTATTTAAATACACATCGCCATTCTCCCGTGGTTACTAAGCTCTaGCAGCTGACTCAGCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GDISISQDSYLNTHRHSPVVTKL*QLTQLS Trigger: CGAGAGCTGAGTCAGCTGCAAGAGCTTAGTAACCAC...GGGAGAATGGCGATGTGTATTTAAATAGCTATCCTGTGAGATAGAAATGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | GGGGACATTTCTATCTCACAGGATAGCTATTTAAATACACATCGCCATTCTCCCTCCTCGCCTTTGAATTaGGGGATGAATTTGTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GDISISQDSYLNTHRHSPSSPLN*GMNLSP Trigger: CGGGGACAAATTCATCCCCAAATTCAAAGGCGAGGA...GGGAGAATGGCGATGTGTATTTAAATAGCTATCCTGTGAGATAGAAATGTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | CGATCCTTTAGCTATTCTAGGAAAGAGAAGCTGACACAAACCCCATTCCCTCAAAGAGTCTTCACATCGTaGGTGCCAATAATTCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSFSYSRKEKLTQTPFPQRVFTS*VPIIPP Trigger: AGGCGGAATTATTGGCACCAACGATGTGAAGACTCT...TTGAGGGAATGGGGTTTGTGTCAGCTTCTCTTTCCTAGAATAGCTAAAGGATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | TCACAGACCAGTGTTTCCTTTGGCAGTTATCTGGTCCTTACTCAACAGTTGTTTCTGGCTTGCTCCCTTTaGTCATTGAGCAATAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQTSVSFGSYLVLTQQLFLACSL*SLSNRS Trigger: GCTCCTATTGCTCAATGACAAAAGGGAGCAAGCCAG...AAACAACTGTTGAGTAAGGACCAGATAACTGCCAAAGGAAACACTGGTCTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | TACAGATCCAAAGATATGACCAGGATATTTAAAATGCTCTCTGGGGTTGGTTTTCAGCGCAAATCTGCATaGTCCCGGACCAGCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YRSKDMTRIFKMLSGVGFQRKSA*SRTSCL Trigger: CAAGCAGCTGGTCCGGGACAATGCAGATTTGCGCTG...AAAACCAACCCCAGAGAGCATTTTAAATATCCTGGTCATATCTTTGGATCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | CACATCGCCATTCTCCCCCATCAAACCACAGAAACAAGTTTGTCCACAATTTTTACAACAGGCGTGATGTaGTCTATGATGGGTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HIAILPHQTTETSLSTIFTTGVM*SMMGVL Trigger: CAACACACCCATCATAGACAACATCACGCCTGTTGT...AAAAATTGTGGACAAACTTGTTTCTGTGGTTTGATGGGGGAGAATGGCGATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | GGGGACATTTCTATCTCACAGGATAGCTATTTAAATACACATCGCCATTCTCCCTGCTCCCTTTTGTCATaGAGCAATAGGAGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GDISISQDSYLNTHRHSPCSLLS*SNRSFS Trigger: GGAGAAGCTCCTATTGCTCAATGACAAAAGGGAGCA...GGGAGAATGGCGATGTGTATTTAAATAGCTATCCTGTGAGATAGAAATGTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | GAAAGGACTATACAACAGAATCCTGGAGGTAATATACACAGCCATCAACATTTCTGTGTTCGTTCATGTTaGTCACAGCCACGTGTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: ERTIQQNPGGNIHSHQHFCVRSC*SQPRVG Trigger: ACCGACACGTGGCTGTGACAAACATGAACGAACACA...GAAATGTTGATGGCTGTGTATATTACCTCCAGGATTCTGTTGTATAGTCCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
||
| CDS-3UTR CAA 90 bp | CACATCGCCATTCTCCCCCATCAAACCACAGAAACAAGTTTGTCCACAATTTTTCCTCTCCTGTTCCAGTaGCAGTTTCTGATTCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: HIAILPHQTTETSLSTIFPLLFQ*QFLIQI Trigger: GATTTGAATCAGAAACTGCAACTGGAACAGGAGAGG...AAAAATTGTGGACAAACTTGTTTCTGTGGTTTGATGGGGGAGAATGGCGATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS-3UTR CAA 90 bp | TACAGATCCAAAGATATGACCAGGATATTTAAAATGCTCTCTGGGGTTGGTTTTGTCAGAGACTTGATCTaGGCTTCGTGCTGTGAGATA | + |
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Preference number: 5 (lower is better) Translates to: YRSKDMTRIFKMLSGVGFVRDLI*ASCCEI Trigger: TATCTCACAGCACGAAGCCAAGATCAAGTCTCTGAC...AAAACCAACCCCAGAGAGCATTTTAAATATCCTGGTCATATCTTTGGATCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS GCA 72 bp | GCCTGGGCGGATGGGCTTGGCGATCTGAGCCGAATGTaGCCTCCTGGCCATGTTCTTGGCTCGCACAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: AWADGLGDLSRM*PPGHVLGSHSL Trigger: GAGGCTGTGCGAGCCAAGAACATGGCCAGGAGGGCACATTCGGCTCAGATCGCCAAGCCCATCCGCCCAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CCA 72 bp | CTGTCGGAGATGATGCTGGGTAATGGCCTGGGCGGATaGGCTTGGCGATCTGAGCCGAATGTGCCCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LSEMMLGNGLGG*AWRSEPNVPSW Trigger: CCAGGAGGGCACATTCGGCTCAGATCGCCAAGCCCATCCGCCCAGGCCATTACCCAGCATCATCTCCGACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS TCA 72 bp | TGTCACAGGGCTCTAGGCTCTTCTGGTCCTTGGCGCTaGTCTGTTCGTCCTCGGGTACAGCTTCCCCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: CHRALGSSGPWR*SVRPRVQLPRS Trigger: GGAACGGGGAAGCTGTACCCGAGGACGAACAGATCAGCGCCAAGGACCAGAAGAGCCTAGAGCCCTGTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
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| CDS GCA 72 bp | CTCTTTCAGCGCACTCTCCAAGGCCTTGACGCGTTCTaGGGTAGCACGAAGCCTCTTCTCCAGCTTGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LFQRTLQGLDAF*GSTKPLLQLGE Trigger: CTCCCCAAGCTGGAGAAGAGGCTTCGTGCTACCGCAGAACGCGTCAAGGCCTTGGAGAGTGCGCTGAAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 90 bp | TACGGCTTCCCTTGCCCGATCACCACCGTCTCCTCGCCTTTGAATTaGGGGATGAATTTGTCCCCGCGGAGGATCTCCGCTTCGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: YGFPCPITTVSSPLN*GMNLSPRRISASLR Trigger: CCTCAACGAAGCGGAGATCCTCCGCGGGGACAAATTCATCCCCAAATTCAAAGGCGAGGAGACGGTGGTGATCGGGCAAGGGAAGCCGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS GCA 72 bp | GGCGGCAGCACTCGGTCAAAGACATACGGCTTCCCTTaGCCGATCACCACCGTCTCCTCGCCTTTGAATTTG | + |
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Preference number: 6 (lower is better) Translates to: GGSTRSKTYGFP*PITTVSSPLNL Trigger: CAAATTCAAAGGCGAGGAGACGGTGGTGATCGGGCAAGGGAAGCCGTATGTCTTTGACCGAGTGCTGCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CCA 72 bp | AGCTCTCGCTGGGTGGTTGTCAGTGTCGTCGTTTTCTaGGCCAGCTCATCAGTCAGTTGCTCGTTGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: SSRWVVVSVVVF*ASSSVSCSLAL Trigger: CAGGGCCAACGAGCAACTGACTGATGAGCTGGCCCAGAAAACGACGACACTGACAACCACCCAGCGAGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 72 bp | CCTTGCCCGATCACCACCGTCTCCTCGCCTTTGAATTaGGGGATGAATTTGTCCCCGCGGAGGATCTCCGCT | + |
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Preference number: 6 (lower is better) Translates to: PCPITTVSSPLN*GMNLSPRRISA Trigger: AGCGGAGATCCTCCGCGGGGACAAATTCATCCCCAAATTCAAAGGCGAGGAGACGGTGGTGATCGGGCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 72 bp | GGCTTCCCTTGCCCGATCACCACCGTCTCCTCGCCTTaGAATTTGGGGATGAATTTGTCCCCGCGGAGGATC | + |
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Preference number: 6 (lower is better) Translates to: GFPCPITTVSSP*NLGMNLSPRRI Trigger: GATCCTCCGCGGGGACAAATTCATCCCCAAATTCAAAGGCGAGGAGACGGTGGTGATCGGGCAAGGGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 72 bp | GGGCGGCAGCACTCGGTCAAAGACATACGGCTTCCCTaGCCCGATCACCACCGTCTCCTCGCCTTTGAATTT | + |
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Preference number: 6 (lower is better) Translates to: GRQHSVKDIRLP*PDHHRLLAFEF Trigger: AAATTCAAAGGCGAGGAGACGGTGGTGATCGGGCAAGGGAAGCCGTATGTCTTTGACCGAGTGCTGCCGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 72 bp | GGTGTGTTGTCACAGGGCTCTAGGCTCTTCTGGTCCTaGGCGCTGATCTGTTCGTCCTCGGGTACAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GVLSQGSRLFWS*ALICSSSGTAS Trigger: GGAAGCTGTACCCGAGGACGAACAGATCAGCGCCAAGGACCAGAAGAGCCTAGAGCCCTGTGACAACACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
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| CDS CAA 90 bp | AAGACATACGGCTTCCCTTGCCCGATCACCACCGTCTCCTCGCCTTaGAATTTGGGGATGAATTTGTCCCCGCGGAGGATCTCCGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: KTYGFPCPITTVSSP*NLGMNLSPRRISAS Trigger: CGAAGCGGAGATCCTCCGCGGGGACAAATTCATCCCCAAATTCAAAGGCGAGGAGACGGTGGTGATCGGGCAAGGGAAGCCGTATGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 90 bp | GGTTGTGTTGGGCGGCAGCACTCGGTCAAAGACATACGGCTTCCCTaGCCCGATCACCACCGTCTCCTCGCCTTTGAATTTGGGGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: GCVGRQHSVKDIRLP*PDHHRLLAFEFGDE Trigger: TTCATCCCCAAATTCAAAGGCGAGGAGACGGTGGTGATCGGGCAAGGGAAGCCGTATGTCTTTGACCGAGTGCTGCCGCCCAACACAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 90 bp | TCTATGATGGGTGTGTTGTCACAGGGCTCTAGGCTCTTCTGGTCCTaGGCGCTGATCTGTTCGTCCTCGGGTACAGCTTCCCCGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SMMGVLSQGSRLFWS*ALICSSSGTASPFL Trigger: GAGGAACGGGGAAGCTGTACCCGAGGACGAACAGATCAGCGCCAAGGACCAGAAGAGCCTAGAGCCCTGTGACAACACACCCATCATAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
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| CDS CCA 72 bp | TTGCACAGGCATTGTAGACCTGCTCCTGGGTTGTGTTaGGCGGCAGCACTCGGTCAAAGACATACGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LHRHCRPAPGLC*AAALGQRHTAS Trigger: GGAAGCCGTATGTCTTTGACCGAGTGCTGCCGCCCAACACAACCCAGGAGCAGGTCTACAATGCCTGTGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CCA 72 bp | CGCTCACTGGCGTTCATCTTCCTGTTAGAGTCCATCTaGGCACTCTCCAGCTGCTTGCTGCGGTTCACGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSLAFIFLLESI*ALSSCLLRFTR Trigger: TCTCGTGAACCGCAGCAAGCAGCTGGAGAGTGCCCAGATGGACTCTAACAGGAAGATGAACGCCAGTGAGCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS GCA 72 bp | ATCTTCCTGTTAGAGTCCATCTGGGCACTCTCCAGCTaGTTGCTGCGGTTCACGAGAGACTTGACCTCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: IFLLESIWALSS*LLRFTRDLTSD Trigger: GTCGGAGGTCAAGTCTCTCGTGAACCGCAGCAAGCAGCTGGAGAGTGCCCAGATGGACTCTAACAGGAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 72 bp | CAGTGTCGTCGTTTTCTGGGCCAGCTCATCAGTCAGTaGCTCGTTGGCCCTGGTCTTGTCCTCCACTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QCRRFLGQLISQ*LVGPGLVLHFL Trigger: CAAGAAGTGGAGGACAAGACCAGGGCCAACGAGCAACTGACTGATGAGCTGGCCCAGAAAACGACGACACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 72 bp | TTCCTGTTAGAGTCCATCTGGGCACTCTCCAGCTGCTaGCTGCGGTTCACGAGAGACTTGACCTCCGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLLESIWALSSC*LRFTRDLTSDF Trigger: GAAGTCGGAGGTCAAGTCTCTCGTGAACCGCAGCAAGCAGCTGGAGAGTGCCCAGATGGACTCTAACAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 90 bp | GAGATGCCGTCCACAACAGGCGTGATGTTGTCTATGATGGGTGTGTaGTCACAGGGCTCTAGGCTCTTCTGGTCCTTGGCGCTGATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: EMPSTTGVMLSMMGV*SQGSRLFWSLALIC Trigger: ACAGATCAGCGCCAAGGACCAGAAGAGCCTAGAGCCCTGTGACAACACACCCATCATAGACAACATCACGCCTGTTGTGGACGGCATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
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| CDS TCA 72 bp | GCCCTCTTTTTCTGGTGGTTACTAAGCTCTTGCAGCTaGCTCAGCTCTCGCTGGGTGGTTGTCAGTGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: ALFFWWLLSSCS*LSSRWVVVSVV Trigger: GACGACACTGACAACCACCCAGCGAGAGCTGAGTCAGCTGCAAGAGCTTAGTAACCACCAGAAAAAGAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS GCA 72 bp | TCCCCGTTCCTCCACCTGTTCAGCTCCATCTCCAGATaGTGGAGGACACTCTTCAAGGCCTTGTTCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPFLHLFSSISR*WRTLFKALFFS Trigger: AGAGAAGAACAAGGCCTTGAAGAGTGTCCTCCAGCATCTGGAGATGGAGCTGAACAGGTGGAGGAACGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
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| CDS GCA 72 bp | AGTGTCGTCGTTTTCTGGGCCAGCTCATCAGTCAGTTaGTCGTTGGCCCTGGTCTTGTCCTCCACTTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SVVVFWASSSVS*SLALVLSSTSC Trigger: ACAAGAAGTGGAGGACAAGACCAGGGCCAACGAGCAACTGACTGATGAGCTGGCCCAGAAAACGACGACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 72 bp | TCGTTCATGTTTGTCACAGCCACGTGTCGGTTTGCTTaGCCCTCATCGATCACATCCATGACCTCCTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: SFMFVTATCRFA*PSSITSMTSSG Trigger: CCCGGAGGAGGTCATGGATGTGATCGATGAGGGCAAAGCAAACCGACACGTGGCTGTGACAAACATGAACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 72 bp | TCCACAACAGGCGTGATGTTGTCTATGATGGGTGTGTaGTCACAGGGCTCTAGGCTCTTCTGGTCCTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: STTGVMLSMMGV*SQGSRLFWSLA Trigger: CGCCAAGGACCAGAAGAGCCTAGAGCCCTGTGACAACACACCCATCATAGACAACATCACGCCTGTTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
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| CDS CAA 72 bp | TTCTCGGCAGAGATGCCGTCCACAACAGGCGTGATGTaGTCTATGATGGGTGTGTTGTCACAGGGCTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: FSAEMPSTTGVM*SMMGVLSQGSR Trigger: CCTAGAGCCCTGTGACAACACACCCATCATAGACAACATCACGCCTGTTGTGGACGGCATCTCTGCCGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
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| CDS CAA 72 bp | GTCGTTTTCTGGGCCAGCTCATCAGTCAGTTGCTCGTaGGCCCTGGTCTTGTCCTCCACTTCTTGTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: VVFWASSSVSCS*ALVLSSTSCDF Trigger: GAAGTCACAAGAAGTGGAGGACAAGACCAGGGCCAACGAGCAACTGACTGATGAGCTGGCCCAGAAAACGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 72 bp | CTCTGTGGCCCTCTTTTTCTGGTGGTTACTAAGCTCTaGCAGCTGACTCAGCTCTCGCTGGGTGGTTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LCGPLFLVVTKL*QLTQLSLGGCQ Trigger: CTGACAACCACCCAGCGAGAGCTGAGTCAGCTGCAAGAGCTTAGTAACCACCAGAAAAAGAGGGCCACAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 72 bp | ATGACCCCGTTCACATCTGCCAGAGTCTTCACATCGTaGGTGCCAATAATTCCGCCTATCTCCCCCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: MTPFTSARVFTS*VPIIPPISPRS Trigger: GGACCTGGGGGAGATAGGCGGAATTATTGGCACCAACGATGTGAAGACTCTGGCAGATGTGAACGGGGTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 90 bp | TACTTCTCCTTCTCGGCAGAGATGCCGTCCACAACAGGCGTGATGTaGTCTATGATGGGTGTGTTGTCACAGGGCTCTAGGCTCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: YFSFSAEMPSTTGVM*SMMGVLSQGSRLFW Trigger: CCAGAAGAGCCTAGAGCCCTGTGACAACACACCCATCATAGACAACATCACGCCTGTTGTGGACGGCATCTCTGCCGAGAAGGAGAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
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| CDS CAA 90 bp | GTTCAGGATCTCTGTGGCCCTCTTTTTCTGGTGGTTACTAAGCTCTaGCAGCTGACTCAGCTCTCGCTGGGTGGTTGTCAGTGTCGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: VQDLCGPLFLVVTKL*QLTQLSLGGCQCRR Trigger: ACGACGACACTGACAACCACCCAGCGAGAGCTGAGTCAGCTGCAAGAGCTTAGTAACCACCAGAAAAAGAGGGCCACAGAGATCCTGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 90 bp | TCCTCCAGTCCCTTGAGGTCCTCCCTGGCTTGCTCCCTTTTGTCATaGAGCAATAGGAGCTTCTCCAGTTTCACTTCTCTCTCCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSPLRSSLACSLLS*SNRSFSSFTSLSWS Trigger: GGACCAGGAGAGAGAAGTGAAACTGGAGAAGCTCCTATTGCTCAATGACAAAAGGGAGCAAGCCAGGGAGGACCTCAAGGGACTGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CCA 72 bp | CCGTTCCTCCACCTGTTCAGCTCCATCTCCAGATGCTaGAGGACACTCTTCAAGGCCTTGTTCTTCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PFLHLFSSISRC*RTLFKALFFSF Trigger: GAAAGAGAAGAACAAGGCCTTGAAGAGTGTCCTCCAGCATCTGGAGATGGAGCTGAACAGGTGGAGGAACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
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| CDS CCA 72 bp | TCGTTTTCTGGGCCAGCTCATCAGTCAGTTGCTCGTTaGCCCTGGTCTTGTCCTCCACTTCTTGTGACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SFSGPAHQSVAR*PWSCPPLLVTS Trigger: AGAAGTCACAAGAAGTGGAGGACAAGACCAGGGCCAACGAGCAACTGACTGATGAGCTGGCCCAGAAAACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 72 bp | CGTCGCTGTCCAGCTCCACACTCTTTTTCACCCGGGTaGTCAAATCCTGGACGAAGAGTTTGCGCAGGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: RRCPAPHSFSPG*SNPGRRVCAGY Trigger: ATAACCTGCGCAAACTCTTCGTCCAGGATTTGACAACCCGGGTGAAAAAGAGTGTGGAGCTGGACAGCGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 72 bp | AAATCTGCATTGTCCCGGACCAGCTGCTTGTGCACCTaGGTAAGCTGTTCCAGGTTGTTCTCCAGGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: KSALSRTSCLCT*VSCSRLFSRKE Trigger: CTCCTTCCTGGAGAACAACCTGGAACAGCTTACCAAGGTGCACAAGCAGCTGGTCCGGGACAATGCAGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS GCA 72 bp | GTGTTCGTTCATGTTTGTCACAGCCACGTGTCGGTTTaGTTTGCCCTCATCGATCACATCCATGACCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VFVHVCHSHVSV*FALIDHIHDLL Trigger: GAGGAGGTCATGGATGTGATCGATGAGGGCAAAGCAAACCGACACGTGGCTGTGACAAACATGAACGAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 72 bp | CCCTTGAGGTCCTCCCTGGCTTGCTCCCTTTTGTCATaGAGCAATAGGAGCTTCTCCAGTTTCACTTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PLRSSLACSLLS*SNRSFSSFTSL Trigger: GAGAGAAGTGAAACTGGAGAAGCTCCTATTGCTCAATGACAAAAGGGAGCAAGCCAGGGAGGACCTCAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 90 bp | AGTCCCTTCTCGTGGAAGCCAGGAGTTTCTGTTCTACATGGACTCTaGAGGGCTCATCCTGATCCAACATCTGTTGCTTCAGCTTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPFSWKPGVSVLHGL*RAHPDPTSVASAFQ Trigger: CTGAAAAGCTGAAGCAACAGATGTTGGATCAGGATGAGCCCTCAAGAGTCCATGTAGAACAGAAACTCCTGGCTTCCACGAGAAGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146247.2 |
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| CDS TCA 72 bp | CATCATCCTTATCATCGAGCTGTCGGTACAAACTGGTaGTCTCCTCGTCATACTTCTCCTTCTCGGCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: HHPYHRAVGTNW*SPRHTSPSRQR Trigger: TCTCTGCCGAGAAGGAGAAGTATGACGAGGAGATCACCAGTTTGTACCGACAGCTCGATGATAAGGATGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
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| CDS TCA 72 bp | GTTGCAGTTTCTGATTCAAATCCCGGATCTCATCAATaGTTCTCTGCTTCTCCTCAATCTCATCGCGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VAVSDSNPGSHQ*FSASPQSHREV Trigger: GACTTCGCGATGAGATTGAGGAGAAGCAGAGAATCATTGATGAGATCCGGGATTTGAATCAGAAACTGCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS GCA 72 bp | ATTATAACCCTCAAGGACATCTTTGACAATCTGCTTTaGACAGGCATTGTAGACCTGCTCCTGGGTTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: IITLKDIFDNLL*TGIVDLLLGCV Trigger: AACACAACCCAGGAGCAGGTCTACAATGCCTGTGCAAAGCAGATTGTCAAAGATGTCCTTGAGGGTTATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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| CDS CAA 90 bp | CTGTTCAGCTCCATCTCCAGATGCTGGAGGACACTCTTCAAGGCCTaGTTCTTCTCTTTCTCTTTTTCATATTTCTTCTTCCACTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LFSSISRCWRTLFKA*FFSFSFSYFFFHSS Trigger: AGAAGAGTGGAAGAAGAAATATGAAAAAGAGAAAGAGAAGAACAAGGCCTTGAAGAGTGTCCTCCAGCATCTGGAGATGGAGCTGAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
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| CDS CAA 72 bp | TCCATCTCCAGATGCTGGAGGACACTCTTCAAGGCCTaGTTCTTCTCTTTCTCTTTTTCATATTTCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SISRCWRTLFKA*FFSFSFSYFFF Trigger: GAAGAAGAAATATGAAAAAGAGAAAGAGAAGAACAAGGCCTTGAAGAGTGTCCTCCAGCATCTGGAGATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028102.14 ENSMUST00000146247.2 |
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| CDS GCA 72 bp | CTCGTCCATGGAATAGATGTGATCAAAAATATCATGTaGAATCCTTGGAATGATACCCATAAGCTGAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: LVHGIDVIKNIM*NPWNDTHKLRI Trigger: GATCCTCAGCTTATGGGTATCATTCCAAGGATTGCACATGATATTTTTGATCACATCTATTCCATGGACGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028102.14 |
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