Pregenerated sensors for KIF5B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006740Ensembl transcript IDs: ENSMUST00000025083.14, ENSMUST00000163210.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTATATAGCCCTGGCTGTCCTGGAAAGCAGGCTGAACTCAAGCTaGCAGCCATCCATCTGCCTCTGCCTGGGAGTAGAGATGCGTGCC | + |
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Preference number: 1 (lower is better) Translates to: PYIALAVLESRLNSS*QPSICLCLGVEMRA Trigger: GGCACGCATCTCTACTCCCAGGCAGAGGCAGATGGATGGCTGTCAGCTTGAGTTCAGCCTGCTTTCCAGGACAGCCAGGGCTATATAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR GCA 90 bp | TCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTCTTTaGTTCCGGCTACAGCTGCCCCAAGCACTGAGGATGCAGGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: STYQRSPDTAFPVGL*FRLQLPQALRMQVL Trigger: CAGCACCTGCATCCTCAGTGCTTGGGGCAGCTGTAGCCGGAAGCAAAGACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR GCA 90 bp | AAGCTGACAGCCATCCATCTGCCTCTGCCTGGGAGTAGAGATGCGTaGCACCATACCTTGCTTGAGGGATTTTTAAAATACAGTACTGAC | + |
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Preference number: 1 (lower is better) Translates to: KLTAIHLPLPGSRDA*HHTLLEGFLKYSTD Trigger: GTCAGTACTGTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGGCAGAGGCAGATGGATGGCTGTCAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR GCA 90 bp | AAGCAAATTTTCATTTGGAACGAATGTCCTTTAGATGCAGCCAGATaGCTCGCAGAGACAGCGATGAGCACAGGAGCCATACACGTCACT | + |
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Preference number: 1 (lower is better) Translates to: KQIFIWNECPLDAAR*LAETAMSTGAIHVT Trigger: AGTGACGTGTATGGCTCCTGTGCTCATCGCTGTCTCTGCGAGGCATCTGGCTGCATCTAAAGGACATTCGTTCCAAATGAAAATTTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR GCA 90 bp | ACTGCCAGAAAAGCAAATTTTCATTTGGAACGAATGTCCTTTAGATaGAGCCAGATGCCTCGCAGAGACAGCGATGAGCACAGGAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: TARKANFHLERMSFR*SQMPRRDSDEHRSH Trigger: ATGGCTCCTGTGCTCATCGCTGTCTCTGCGAGGCATCTGGCTGCATCTAAAGGACATTCGTTCCAAATGAAAATTTGCTTTTCTGGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR CCA 90 bp | CTAACCACGACTTACACCTCGCTGCATCACGCTCTCTTCAATTTGTaGAGTGCTTCTTTCAATCATAAAAGCAACACAATCATTAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: LTTTYTSLHHALFNL*SASFNHKSNTIIKG Trigger: GCCTTTAATGATTGTGTTGCTTTTATGATTGAAAGAAGCACTCCACAAATTGAAGAGAGCGTGATGCAGCGAGGTGTAAGTCGTGGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR CAA 90 bp | GTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTCTTaGCTTCCGGCTACAGCTGCCCCAAGCACTGAGGATGCAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: VYLSKIPRHCISCGS*LPATAAPSTEDAGA Trigger: AGCACCTGCATCCTCAGTGCTTGGGGCAGCTGTAGCCGGAAGCAAAGACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR-3UTR TCA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTAGGCTGAACTCAAGCTaGCAGCCATCCATCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPRLNSS*QPSICL Trigger: GAGGCAGATGGATGGCTGTCAGCTTGAGTTCAGCCT...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR CAA 90 bp | TCCAAAGATTCTGCCAGCCAGATTCTAACCCAGAACTTCAAAAGCTaGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: SKDSASQILTQNFKS*STYQRSPDTAFPVG Trigger: ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTGGGTTAGAATCTGGCTGGCAGAATCTTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR-3UTR TCA 90 bp | CAAGCACCGATACCCATGATACATCTTAAAACTTCTATACTCAGACAAAGGAGATCCTGGAAAGCAGGCTaGACTCAAGCTGACAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: QAPIPMIHLKTSILRQRRSWKAG*TQADSH Trigger: ATGGCTGTCAGCTTGAGTTCAGCCTGCTTTCCAGGA...TCTCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR-3UTR CCA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTCAGAGTTTACAAGAGTaGGTAGGAAACAGCTGTACA | + |
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Preference number: 2 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPQSLQE*VGNSCT Trigger: TGTACAGCTGTTTCCTACCCACTCTTGTAAACTCTG...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR CAA 90 bp | TCACTAACCACGACTTACACCTCGCTGCATCACGCTCTCTTCAATTaGTGGAGTGCTTCTTTCAATCATAAAAGCAACACAATCATTAAA | + |
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Preference number: 2 (lower is better) Translates to: SLTTTYTSLHHALFN*WSASFNHKSNTIIK Trigger: TTTAATGATTGTGTTGCTTTTATGATTGAAAGAAGCACTCCACAAATTGAAGAGAGCGTGATGCAGCGAGGTGTAAGTCGTGGTTAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR GCA 72 bp | CAAAGATCCCCAGACACTGCATTTCCTGTGGGTCTTTaGTTCCGGCTACAGCTGCCCCAAGCACTGAGGATG | + |
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Preference number: 3 (lower is better) Translates to: QRSPDTAFPVGL*FRLQLPQALRM Trigger: CATCCTCAGTGCTTGGGGCAGCTGTAGCCGGAAGCAAAGACCCACAGGAAATGCAGTGTCTGGGGATCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR CCA 72 bp | CTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTaGGTCTTTGCTTCCGGCTACAGCTGCCCCAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: LLIKDPQTLHFL*VFASGYSCPKH Trigger: GTGCTTGGGGCAGCTGTAGCCGGAAGCAAAGACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR GCA 72 bp | GCCATCCATCTGCCTCTGCCTGGGAGTAGAGATGCGTaGCACCATACCTTGCTTGAGGGATTTTTAAAATAC | + |
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Preference number: 3 (lower is better) Translates to: AIHLPLPGSRDA*HHTLLEGFLKY Trigger: GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGGCAGAGGCAGATGGATGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR GCA 72 bp | TTCATTTGGAACGAATGTCCTTTAGATGCAGCCAGATaGCTCGCAGAGACAGCGATGAGCACAGGAGCCATA | + |
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Preference number: 3 (lower is better) Translates to: FIWNECPLDAAR*LAETAMSTGAI Trigger: TATGGCTCCTGTGCTCATCGCTGTCTCTGCGAGGCATCTGGCTGCATCTAAAGGACATTCGTTCCAAATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR-3UTR CAA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCATCTAGGACATCAACATaGCACTCTAGTGTTGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: VQSRTPGLKAQRFQRQASSRTST*HSSVGK Trigger: CTTCCCAACACTAGAGTGCAATGTTGATGTCCTAGA...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR GCA 72 bp | CAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTaGATTTCCTGTGGGTCTTTGCTTCCGGCTACAGCT | + |
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Preference number: 3 (lower is better) Translates to: QKLVYLSKIPRH*ISCGSLLPATA Trigger: AGCTGTAGCCGGAAGCAAAGACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR GCA 72 bp | AAAGCAAATTTTCATTTGGAACGAATGTCCTTTAGATaGAGCCAGATGCCTCGCAGAGACAGCGATGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: KANFHLERMSFR*SQMPRRDSDEH Trigger: GTGCTCATCGCTGTCTCTGCGAGGCATCTGGCTGCATCTAAAGGACATTCGTTCCAAATGAAAATTTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR CCA 72 bp | GATATAATAGAAAGAGCCTGTTCAGTCTCGAACTCCTaGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: DIIERACSVSNS*SQSSTFSEASF Trigger: GAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAACAGGCTCTTTCTATTATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR-3UTR CAA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTCATTGCACTCTAGTGTaGGGAAGCAGCAGAGTTTAC | + |
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Preference number: 3 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPHCTLV*GSSRVY Trigger: GTAAACTCTGCTGCTTCCCAACACTAGAGTGCAATG...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR CCA 72 bp | ACTTACACCTCGCTGCATCACGCTCTCTTCAATTTGTaGAGTGCTTCTTTCAATCATAAAAGCAACACAATC | + |
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Preference number: 3 (lower is better) Translates to: TYTSLHHALFNL*SASFNHKSNTI Trigger: GATTGTGTTGCTTTTATGATTGAAAGAAGCACTCCACAAATTGAAGAGAGCGTGATGCAGCGAGGTGTAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR TCA 72 bp | ACAATTCATTGTGTGTTATACAAGCACCGATACCCATaGTACATCTTAAAACTTCTATACTCAGACAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: TIHCVLYKHRYP*YILKLLYSDKG Trigger: TCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTGTATAACACACAATGAATTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| 3UTR CAA 72 bp | TCAAAGATCCCCAGACACTGCATTTCCTGTGGGTCTTaGCTTCCGGCTACAGCTGCCCCAAGCACTGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: SKIPRHCISCGS*LPATAAPSTED Trigger: ATCCTCAGTGCTTGGGGCAGCTGTAGCCGGAAGCAAAGACCCACAGGAAATGCAGTGTCTGGGGATCTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCAAGCGACACATCACTTTaGTGTTGCACTCCGCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: VQSRTPGLKAQRFQRQASSDTSL*CCTPPG Trigger: ACCCGGCGGAGTGCAACATCAAAGTGATGTGTCGCT...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR GCA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACGCCTTCAGCCTCTCATaGTCCACCCTTAGCCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PGSRDACHHTLLEGFLKYAFSLS*STLSRS Trigger: GGAACGGCTAAGGGTGGAGCATGAGAGGCTGAAGGC...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR GCA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTCTCCTCCACGAACTGTaGCCGGGTGAGTTGGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGLLHEL*PGELAR Trigger: CCTCGCCAACTCACCCGGGCACAGTTCGTGGAGGAG...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR CCA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACCTTCTCCCTGGAATTTaGCGACGTACTTATCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: PGSRDACHHTLLEGFLKYLLPGI*RRTYRR Trigger: GCGGCGATAAGTACGTCGCCAAATTCCAGGGAGAAG...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR CCA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCATGGGAGATCCGAAGCTaGCATGCTGCTAACTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: VQSRTPGLKAQRFQRQASWEIRS*HAANSF Trigger: GAAAGAGTTAGCAGCATGCCAGCTTCGGATCTCCCA...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR CCA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCAACCACGAAGCCCCACTaGCTGGTTGTTCTGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: VQSRTPGLKAQRFQRQASTTKPH*LVVLNK Trigger: TTTGTTCAGAACAACCAGCCAGTGGGGCTTCGTGGT...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR CCA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCATTACCCTCCATCGTGTaGGTCTTCCCAGATGATGTT | + |
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Preference number: 4 (lower is better) Translates to: VQSRTPGLKAQRFQRQASLPSIV*VFPDDV Trigger: AACATCATCTGGGAAGACCCACACGATGGAGGGTAA...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCAATTGTTTTGGCCCTTTaGCCAAAGAGGAGTGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: VQSRTPGLKAQRFQRQASIVLAL*PKRSVD Trigger: GTCAACACTCCTCTTTGGTCAAAGGGCCAAAACAAT...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR GCA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTGATTTTCTGCTTCTGTaGAGCACTGCCGCCAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGDFLLL*STAASV Trigger: GACACTGGCGGCAGTGCTGCACAGAAGCAGAAAATC...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACCTCTTGAGATGTGCTTaGCTGGAACACACGATCAAA | + |
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Preference number: 4 (lower is better) Translates to: PGSRDACHHTLLEGFLKYLLRCA*LEHTIK Trigger: TTTGATCGTGTGTTCCAGTCAAGCACATCTCAAGAG...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCACATCTATGGTATCCATaGCTTCATCTGGACTACACA | + |
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Preference number: 4 (lower is better) Translates to: VQSRTPGLKAQRFQRQASHLWYP*LHLDYT Trigger: TGTGTAGTCCAGATGAAGTCATGGATACCATAGATG...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTTTGATCCCTTCTGGTTaGTGCCAGAAGCTCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGLIPSG*CQKLFL Trigger: CAGGAAGAGCTTCTGGCATCAACCAGAAGGGATCAA...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCAAAGGTACTCAGTCAGTaGCTTGATTTTGGCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: VQSRTPGLKAQRFQRQASKVLSQ*LDFGFM Trigger: CATGAAGCCAAAATCAAGTCACTGACTGAGTACCTT...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACAGGTTGTGTAAAGTCTaGAGTTCTTTTGCCACGGTC | + |
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Preference number: 4 (lower is better) Translates to: PGSRDACHHTLLEGFLKYRLCKV*SSFATV Trigger: GACCGTGGCAAAAGAACTTCAGACTTTACACAACCT...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTGGCTTCTTTCAGGGCTaGCTCCAAAGCTTTCACTCT | + |
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Preference number: 4 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGGFFQG*LQSFHS Trigger: AGAGTGAAAGCTTTGGAGTCAGCCCTGAAAGAAGCC...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR GCA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACTGCTTTCTAGCTGTTTaGAGCGTTTCACCATGGTCT | + |
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Preference number: 4 (lower is better) Translates to: PGSRDACHHTLLEGFLKYCFLAV*SVSPWS Trigger: AGACCATGGTGAAACGCTGCAAACAGCTAGAAAGCA...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR CCA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTTTCCTGCTCTTCTCTTaGTCTGTAGCCTTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGFLLFS*SVAFSL Trigger: GAGGCTGAAGGCTACAGACCAAGAGAAGAGCAGGAA...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACGATAAAGCTTTCCACTaGGTTTCTGTTCCGTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: PGSRDACHHTLLEGFLKYDKAFH*VSVPFV Trigger: CACAAACGGAACAGAAACTCAGTGGAAAGCTTTATC...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACTCCAAGTGCAGAAAGTaGCTTGTTGATGTTCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: PGSRDACHHTLLEGFLKYSKCRK*LVDVLS Trigger: GCTAAGAACATCAACAAGTCACTTTCTGCACTTGGA...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACACCAAAGAGGAGTGTTaGCTTTGTCTCAGACTCATT | + |
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Preference number: 4 (lower is better) Translates to: PGSRDACHHTLLEGFLKYTKEEC*LCLRLI Trigger: AATGAGTCTGAGACAAAGTCAACACTCCTCTTTGGT...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACACTTCATTTGCAGTCTaGACCTTGTTCAAGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PGSRDACHHTLLEGFLKYTSFAV*TLFKCS Trigger: AGAGCACTTGAACAAGGTTCAGACTGCAAATGAAGT...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTCCATGTTCTTTGACCTaGCTGCTTCCTTTATCCGGT | + |
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Preference number: 4 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGPCSLT*LLPLSG Trigger: ACCGGATAAAGGAAGCAGTCAGGTCAAAGAACATGG...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTGTTGTTCTGAACAAATaGGCCTCCTCCACGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGVVLNK*ASSTNC Trigger: ACAGTTCGTGGAGGAGGCTCATTTGTTCAGAACAAC...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR GCA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTTTATCGCGTACCAACTaGTTGTGCACTTTGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGLSRTN*LCTLVS Trigger: GCTCACCAAAGTGCACAAGCAGTTGGTACGCGATAA...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CCA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACACCATCTTCTGGTTTTaGTCTTGGAGGTCAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: PGSRDACHHTLLEGFLKYTIFWF*SWRSVI Trigger: AATCACTGACCTCCAAGACCAAAACCAGAAGATGGT...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR TCA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCAATAAGAAATATGCTGTaGCTCCTAGAGCTATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQSRTPGLKAQRFQRQASIRNML*LLELCS Trigger: TGAACATAGCTCTAGGAGTCACAGCATATTTCTTAT...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR TCA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGGTCTTGGAGGTCAGTaGTTAGCTTTTCCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPGLGGQ*LAFPLP Trigger: AGGCAAAGGAAAAGCTAATCACTGACCTCCAAGACC...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR GCA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTCTTGCTCTTGAGATGTaGTTGACTGGAACACACGAT | + |
|
Preference number: 4 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGLALEM*LTGTHD Trigger: ATCGTGTGTTCCAGTCAAGCACATCTCAAGAGCAAG...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR GCA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTTGCTCTCAGTCTGTGTaGTTTCTAGCTGTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPCSQSV*FLAVCS Trigger: GCTGCAAACAGCTAGAAAGCACACAGACTGAGAGCA...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR GCA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTCGTACCAACTGCTTGTaGACTTTGGTGAGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPRTNCL*TLVSCS Trigger: TGAACAGCTCACCAAAGTGCACAAGCAGTTGGTACG...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CCA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACTTCTGGTTTTGGTCTTaGAGGTCAGTGATTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PGSRDACHHTLLEGFLKYFWFWS*RSVISF Trigger: AAAGCTAATCACTGACCTCCAAGACCAAAACCAGAA...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| 3UTR CAA 72 bp | GTTGTAAACTGTCGTTTCCCTTCTAGGACATCAACATaGCACTCTAGTGTTGGGAAGCAGCAGAGTTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: VVNCRFPSRTST*HSSVGKQQSLQ Trigger: TTGTAAACTCTGCTGCTTCCCAACACTAGAGTGCAATGTTGATGTCCTAGAAGGGAAACGACAGTTTACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| 3UTR CAA 72 bp | ACGACTTACACCTCGCTGCATCACGCTCTCTTCAATTaGTGGAGTGCTTCTTTCAATCATAAAAGCAACACA | + |
|
Preference number: 4 (lower is better) Translates to: TTYTSLHHALFN*WSASFNHKSNT Trigger: TGTGTTGCTTTTATGATTGAAAGAAGCACTCCACAAATTGAAGAGAGCGTGATGCAGCGAGGTGTAAGTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR TCA 90 bp | CAAGCACCGATACCCATGATACATCTTAAAACTTCTATACTCAGACAAAGGAGAATGCCTTCTGGATCATaGAGTTTACCCTCCATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QAPIPMIHLKTSILRQRRMPSGS*SLPSIV Trigger: CACGATGGAGGGTAAACTTCATGATCCAGAAGGCAT...TCTCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR TCA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTACTCAGTCAGTGACTTaGTTTTGGCTTCATGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPTQSVT*FWLHVG Trigger: CCCAACATGAAGCCAAAATCAAGTCACTGACTGAGT...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR TCA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTTCTGGCCATGTTCTTTaGCCTGACTGCTTCCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPSGHVL*PDCFLY Trigger: ATAAAGGAAGCAGTCAGGTCAAAGAACATGGCCAGA...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR GCA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTAGAAGCATCATTTTCTaGTTGGAGGCGATTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGRSIIF*LEAIQF Trigger: GAACTGAATCGCCTCCAAGCAGAAAATGATGCTTCT...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR GCA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTACAGACTCCTCCAGCTaGCTCTTCTTTTGTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPTDSSS*LFFCST Trigger: TGTAGAACAAAAGAAGAGGCAGCTGGAGGAGTCTGT...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR GCA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTTGCTGCTCAACAGCTTaGTTGACTTCATTTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPCCSTA*LTSFAV Trigger: GACTGCAAATGAAGTCAAGCAAGCTGTTGAGCAGCA...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CCA 90 bp | CAAGCACCGATACCCATGATACATCTTAAAACTTCTATACTCAGACAAAGGAGAACCGTGTCTTCTCCCTaGAATTTGGCGACGTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: QAPIPMIHLKTSILRQRRTVSSP*NLATYL Trigger: TAAGTACGTCGCCAAATTCCAGGGAGAAGACACGGT...TCTCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR CCA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACCGGTTTTTGTCTTCATaGACTGAAAGGTTAGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PGSRDACHHTLLEGFLKYRFLSS*TERLVF Trigger: AAAGACTAACCTTTCAGTCCATGAAGACAAAAACCG...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CCA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACACCAATTGGCTTTGTTaGTTAATCTCTTCATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGSRDACHHTLLEGFLKYTNWLC*LISSSL Trigger: CAAGGATGAAGAGATTAACCAACAAAGCCAATTGGT...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR CCA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTTCCAACACCATCTTCTaGTTTTGGTCTTGGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPSNTIF*FWSWRS Trigger: TGACCTCCAAGACCAAAACCAGAAGATGGTGTTGGA...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CCA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTGAGATGCATTTTCTTTaGCTTCTTTCAGGGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGEMHFL*LLSGLT Trigger: AGTCAGCCCTGAAAGAAGCCAAAGAAAATGCATCTC...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR TCA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTTTGTATACTTGCTCTTaGGATGTGCTTGACTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPLYTCS*DVLDWN Trigger: GTTCCAGTCAAGCACATCTCAAGAGCAAGTATACAA...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | CAAGCACCGATACCCATGATACATCTTAAAACTTCTATACTCAGACAAAGGAGATCGTTTTCCAGCCACTaGATAGTGTTCCGTAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QAPIPMIHLKTSILRQRRSFSSH*IVFRRV Trigger: AACTCTACGGAACACTATTCAGTGGCTGGAAAACGA...TCTCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTTTTTGTTCTACATTCTaGAGGTACTCAGTCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGFCSTF*RYSVSD Trigger: GTCACTGACTGAGTACCTTCAGAATGTAGAACAAAA...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | CAAGCACCGATACCCATGATACATCTTAAAACTTCTATACTCAGACAAAGGAGAGCTCAACAGCTTGCTTaGCTTCATTTGCAGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QAPIPMIHLKTSILRQRRAQQLA*LHLQSE Trigger: TTCAGACTGCAAATGAAGTCAAGCAAGCTGTTGAGC...TCTCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTCATCTCGCAAACTACTaGTTTGTTTTTGGTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGHLANY*FVFGGF Trigger: AAACCCACCAAAAACAAATCAGTAGTTTGCGAGATG...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR TCA 90 bp | CAAGCACCGATACCCATGATACATCTTAAAACTTCTATACTCAGACAAAGGAGAGCTTGTGCACTTTGGTaGGCTGTTCAAGGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QAPIPMIHLKTSILRQRRACALW*AVQGCF Trigger: AAAACAACCTTGAACAGCTCACCAAAGTGCACAAGC...TCTCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR GCA 90 bp | CAAGCACCGATACCCATGATACATCTTAAAACTTCTATACTCAGACAAAGGAGAAAGGAACATAGGTACTaGCCTCTGCCAAAGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QAPIPMIHLKTSILRQRRKEHRY*PLPKQK Trigger: TTTCTGCTTTGGCAGAGGGCAGTACCTATGTTCCTT...TCTCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR GCA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTAGCTTTCACTCTTTCTaGAGTAGCTCTAAGCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPSFHSF*SSSKPF Trigger: AAACGGCTTAGAGCTACTGCAGAAAGAGTGAAAGCT...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR TCA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTATTTCCTTCAGCTTCTaGAGCTCAGCATCAATACTT | + |
|
Preference number: 4 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPISFSF*SSASIL Trigger: AAGTATTGATGCTGAGCTTCAGAAGCTGAAGGAAAT...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR GCA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTTACTTCTTTTTCCACTaGTCCGCAGTTAACTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPYFFFH*SAVNST Trigger: TGTAGAGTTAACTGCGGAGCAGTGGAAAAAGAAGTA...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR GCA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTTTTACGGTCTCGAGATaGATTTTCTTTGGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGFTVSR*IFFGFF Trigger: AAAGAAGCCAAAGAAAATGCATCTCGAGACCGTAAA...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS-3UTR CCA 90 bp | CAAGCACCGATACCCATGATACATCTTAAAACTTCTATACTCAGACAAAGGAGAAATTCCCATGCCTTCTaGATCATGAAGTTTACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QAPIPMIHLKTSILRQRRNSHAF*IMKFTL Trigger: GAGGGTAAACTTCATGATCCAGAAGGCATGGGAATT...TCTCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR GCA 90 bp | CAAGCACCGATACCCATGATACATCTTAAAACTTCTATACTCAGACAAAGGAGATTCTCTTTGTCAAACTaGTCATCAATAGGCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QAPIPMIHLKTSILRQRRFSLSN*SSIGTV Trigger: GACAGTGCCTATTGATGAGCAGTTTGACAAAGAGAA...TCTCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS TCA 90 bp | GCCTCCACCACCACGAAGCCCCACTGGCTGGTTGTTCTGAACAAATaGGCCTCCTCCACGAACTGTGCCCGGGTGAGTTGGCGAGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ASTTTKPHWLVVLNK*ASSTNCARVSWRGR Trigger: GCGGCCTCGCCAACTCACCCGGGCACAGTTCGTGGAGGAGGCTCATTTGTTCAGAACAACCAGCCAGTGGGGCTTCGTGGTGGTGGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS CCA 90 bp | CTGTCTTGCATAACCGTGAGCTCGTGCAGCTTCCTGCTCTTCTCTTaGTCTGTAGCCTTCAGCCTCTCATGCTCCACCCTTAGCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSCITVSSCSFLLFS*SVAFSLSCSTLSRS Trigger: GGAACGGCTAAGGGTGGAGCATGAGAGGCTGAAGGCTACAGACCAAGAGAAGAGCAGGAAGCTGCACGAGCTCACGGTTATGCAAGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS GCA 90 bp | TGGTCTGTAGCCTTCAGCCTCTCATGCTCCACCCTTAGCCGTTCCTaGTCCAACACCATCTTCTGGTTTTGGTCTTGGAGGTCAGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: WSVAFSLSCSTLSRS*SNTIFWFWSWRSVI Trigger: AATCACTGACCTCCAAGACCAAAACCAGAAGATGGTGTTGGAGCAGGAACGGCTAAGGGTGGAGCATGAGAGGCTGAAGGCTACAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS GCA 90 bp | TCTTGTCTTGCTTGTTCTCGTCTGTCTTGCATAACCGTGAGCTCGTaGAGCTTCCTGCTCTTCTCTTGGTCTGTAGCCTTCAGCCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCLACSRLSCITVSS*SFLLFSWSVAFSLS Trigger: TGAGAGGCTGAAGGCTACAGACCAAGAGAAGAGCAGGAAGCTGCACGAGCTCACGGTTATGCAAGACAGACGAGAACAAGCAAGACAAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS CCA 90 bp | ACCCTTAGCCGTTCCTGCTCCAACACCATCTTCTGGTTTTGGTCTTaGAGGTCAGTGATTAGCTTTTCCTTTGCCTCCACTTCATCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: TLSRSCSNTIFWFWS*RSVISFSFASTSSR Trigger: GCGAGATGAAGTGGAGGCAAAGGAAAAGCTAATCACTGACCTCCAAGACCAAAACCAGAAGATGGTGTTGGAGCAGGAACGGCTAAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCACTTCCTGCTCTTCTCTaGGTCTGTAGCCTTCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VQSRTPGLKAQRFQRQASLPALL*VCSLQP Trigger: AGGCTGAAGGCTACAGACCAAGAGAAGAGCAGGAAG...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCATCGCGTACCAACTGCTaGTGCACTTTGGTGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VQSRTPGLKAQRFQRQASSRTNC*CTLVSC Trigger: ACAGCTCACCAAAGTGCACAAGCAGTTGGTACGCGA...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS CCA 90 bp | AAGTGCTCTTTTTCCATTTCATGGACTTTCTCTTGTGCTCGGAGTTaGACTAGCTCCTCACCAAGGGAATCAACAGACTCCTCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KCSFSISWTFSCARS*TSSSPRESTDSSSC Trigger: GCAGCTGGAGGAGTCTGTTGATTCCCTTGGTGAGGAGCTAGTCCAACTCCGAGCACAAGAGAAAGTCCATGAAATGGAAAAAGAGCACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACTCTTCTCCCTGGAATTaGGCGACGTACTTATCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PGSRDACHHTLLEGFLKYSSPWN*ATYLSP Trigger: CGGCGATAAGTACGTCGCCAAATTCCAGGGAGAAGA...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCATTCACTTCAGATTCGTaGAGAGGTCTGAAGCGACAC | + |
|
Preference number: 5 (lower is better) Translates to: VQSRTPGLKAQRFQRQASFTSDS*RGLKRH Trigger: GTGTCGCTTCAGACCTCTCAACGAATCTGAAGTGAA...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCATATCCGGTCTACTTCTaGCTGATAGCGTTTACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VQSRTPGLKAQRFQRQASYPVYF*LIAFTV Trigger: GACCGTAAACGCTATCAGCAAGAAGTAGACCGGATA...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS TCA 90 bp | GCGTTTACGGTCTCGAGATGCATTTTCTTTGGCTTCTTTCAGGGCTaGCTCCAAAGCTTTCACTCTTTCTGCAGTAGCTCTAAGCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: AFTVSRCIFFGFFQG*LQSFHSFCSSSKPF Trigger: AAACGGCTTAGAGCTACTGCAGAAAGAGTGAAAGCTTTGGAGTCAGCCCTGAAAGAAGCCAAAGAAAATGCATCTCGAGACCGTAAACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS GCA 90 bp | TTATCCGCTGTGAAGGCTTCCAAATTAGCTTTCTCTTTGTCAAACTaGTCATCAATAGGCACTGTCTCCCCGTTACGCCAACGGTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSAVKASKLAFSLSN*SSIGTVSPLRQRFS Trigger: GCTAAACCGTTGGCGTAACGGGGAGACAGTGCCTATTGATGAGCAGTTTGACAAAGAGAAAGCTAATTTGGAAGCCTTCACAGCGGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACAACTGCTTGTGCACTTaGGTGAGCTGTTCAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGSRDACHHTLLEGFLKYNCLCT*VSCSRL Trigger: CAACCTTGAACAGCTCACCAAAGTGCACAAGCAGTT...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACCGAGATGCATTTTCTTaGGCTTCTTTCAGGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PGSRDACHHTLLEGFLKYRDAFS*ASFRAD Trigger: GTCAGCCCTGAAAGAAGCCAAAGAAAATGCATCTCG...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS CCA 90 bp | TCTTTCAGCATCGGTAAAACTACCAGCCATTCCGACTGCAGCAGCTaGTTTATCACTGGTAATAGCAATATCTTTATCCGCTGTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFSIGKTTSHSDCSS*FITGNSNIFIRCEG Trigger: GCCTTCACAGCGGATAAAGATATTGCTATTACCAGTGATAAACCAGCTGCTGCAGTCGGAATGGCTGGTAGTTTTACCGATGCTGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
||
| CDS CCA 90 bp | CTTGGAGGCGATTCAGTTCAGCTTGCATATTATCTTGATCCCTTCTaGTTGATGCCAGAAGCTCTTCCTGATCCAGCATTTGTGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGGDSVQLAYYLDPF*LMPEALPDPAFVSS Trigger: TGAAGACACAAATGCTGGATCAGGAAGAGCTTCTGGCATCAACCAGAAGGGATCAAGATAATATGCAAGCTGAACTGAATCGCCTCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCACCGATACCCATGATACATCTTAAAACTTCTATACTCAGACAAAGGAGAAAGCGACACATCACTTaGATGTTGCACTCCGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QAPIPMIHLKTSILRQRRKRHIT*MLHSAG Trigger: CCCGGCGGAGTGCAACATCAAAGTGATGTGTCGCTT...TCTCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCAAGAGGAGTGTTGACTTaGTCTCAGACTCATTGTATG | + |
|
Preference number: 5 (lower is better) Translates to: VQSRTPGLKAQRFQRQASRGVLT*SQTHCM Trigger: CATACAATGAGTCTGAGACAAAGTCAACACTCCTCT...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACGTCAGTGACTTGATTTaGGCTTCATGTTGGGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: PGSRDACHHTLLEGFLKYVSDLI*ASCWEI Trigger: GATCTCCCAACATGAAGCCAAAATCAAGTCACTGAC...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCACAGCTGCCTCTTCTTTaGTTCTACATTCTGAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VQSRTPGLKAQRFQRQASQLPLL*FYILKV Trigger: TACCTTCAGAATGTAGAACAAAAGAAGAGGCAGCTG...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS TCA 90 bp | GAATCAACAGACTCCTCCAGCTGCCTCTTCTTTTGTTCTACATTCTaGAGGTACTCAGTCAGTGACTTGATTTTGGCTTCATGTTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ESTDSSSCLFFCSTF*RYSVSDLILASCWE Trigger: CTCCCAACATGAAGCCAAAATCAAGTCACTGACTGAGTACCTTCAGAATGTAGAACAAAAGAAGAGGCAGCTGGAGGAGTCTGTTGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCAAGTGCAGAAAGTGACTaGTTGATGTTCTTAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VQSRTPGLKAQRFQRQASSAESD*LMFLAS Trigger: TGAAGCTAAGAACATCAACAAGTCACTTTCTGCACT...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCATTCCTGATCCAGCATTaGTGTCTTCAATTTCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: VQSRTPGLKAQRFQRQASFLIQH*CLQFLY Trigger: GTAGAGAAATTGAAGACACAAATGCTGGATCAGGAA...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTCTTGATCCCTTCTGGTaGATGCCAGAAGCTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPLDPFW*MPEALP Trigger: AGGAAGAGCTTCTGGCATCAACCAGAAGGGATCAAG...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTAGCATCATTTTCTGCTaGGAGGCGATTCAGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGSIIFC*EAIQFS Trigger: GCTGAACTGAATCGCCTCCAAGCAGAAAATGATGCT...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCAACTACTGATTTGTTTTaGGTGGGTTTCTCTGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: VQSRTPGLKAQRFQRQASTTDLF*VGFSVT Trigger: AGTCACAGAGAAACCCACCAAAAACAAATCAGTAGT...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTCACCATCTTCTGGTTTaGGTCTTGGAGGTCAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGHHLLV*VLEVSD Trigger: ATCACTGACCTCCAAGACCAAAACCAGAAGATGGTG...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS TCA 90 bp | GAGGCGATTCAGTTCAGCTTGCATATTATCTTGATCCCTTCTGGTTaGTGCCAGAAGCTCTTCCTGATCCAGCATTTGTGTCTTCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: EAIQFSLHIILIPSG*CQKLFLIQHLCLQF Trigger: AAATTGAAGACACAAATGCTGGATCAGGAAGAGCTTCTGGCATCAACCAGAAGGGATCAAGATAATATGCAAGCTGAACTGAATCGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
||
| CDS GCA 90 bp | ACACTTTCTTCTTTCAGCATCGGTAAAACTACCAGCCATTCCGACTaGAGCAGCTGGTTTATCACTGGTAATAGCAATATCTTTATCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TLSSFSIGKTTSHSD*SSWFITGNSNIFIR Trigger: GCGGATAAAGATATTGCTATTACCAGTGATAAACCAGCTGCTGCAGTCGGAATGGCTGGTAGTTTTACCGATGCTGAAAGAAGAAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTCTCGAACTCCTGGTCTCAAAGCTCAACGTTTTCAGAGGCAAGCTTCACAATTTCTCTACCAATaGGCTTTGTTGGTTAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VQSRTPGLKAQRFQRQASQFLYQ*ALLVNL Trigger: GAGATTAACCAACAAAGCCAATTGGTAGAGAAATTG...TGAAGCTTGCCTCTGAAAACGTTGAGCTTTGAGACCAGGAGTTCGAGACTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | CAAGCACCGATACCCATGATACATCTTAAAACTTCTATACTCAGACAAAGGAGAGTGCTTTCTAGCTGTTaGCAGCGTTTCACCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QAPIPMIHLKTSILRQRRVLSSC*QRFTMV Trigger: GACCATGGTGAAACGCTGCAAACAGCTAGAAAGCAC...TCTCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | CAAGCACCGATACCCATGATACATCTTAAAACTTCTATACTCAGACAAAGGAGAGCTCTTGAGATGTGCTaGACTGGAACACACGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: QAPIPMIHLKTSILRQRRALEMC*TGTHDQ Trigger: TTGATCGTGTGTTCCAGTCAAGCACATCTCAAGAGC...TCTCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACTACCAATTGGCTTTGTaGGTTAATCTCTTCATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGSRDACHHTLLEGFLKYYQLAL*VNLFIL Trigger: AAGGATGAAGAGATTAACCAACAAAGCCAATTGGTA...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACGCCTGTAAAACTTCTTaGACTTCTTCTTTAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGSRDACHHTLLEGFLKYACKTS*TSSLEA Trigger: TGCTTCTAAAGAAGAAGTCAAAGAAGTTTTACAGGC...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | CCTGGGAGTAGAGATGCGTGCCACCATACCTTGCTTGAGGGATTTTTAAAATACGCTCAGCATCAATACTaGCTAAAGTTGCAGATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PGSRDACHHTLLEGFLKYAQHQY*LKLQIF Trigger: AAAAATCTGCAACTTTAGCAAGTATTGATGCTGAGC...GTATTTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCTCTACTCCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTCCTTCAAGTCTTGTCTaGCTTGTTCTCGTCTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPPSSLV*LVLVCL Trigger: AAGACAGACGAGAACAAGCAAGACAAGACTTGAAGG...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | CAAGCACCGATACCCATGATACATCTTAAAACTTCTATACTCAGACAAAGGAGAACTGCGACATGTCTGTaGGATTTCCCTTCATCTATG | + |
|
Preference number: 5 (lower is better) Translates to: QAPIPMIHLKTSILRQRRTATCL*DFPSSM Trigger: CATAGATGAAGGGAAATCCAACAGACATGTCGCAGT...TCTCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | TTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTGTGGGTGCAGTTAACTCTACATaGACACAGACTGTGTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: FKSLSTYQRSPDTAFPVGAVNST*TQTVFL Trigger: TAAGAACACAGTCTGTGTCAATGTAGAGTTAACTGC...ACCCACAGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | CAAGCACCGATACCCATGATACATCTTAAAACTTCTATACTCAGACAAAGGAGACAAGTCTTGTCTTGCTaGTTCTCGTCTGTCTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QAPIPMIHLKTSILRQRRQVLSC*FSSVLH Trigger: ATGCAAGACAGACGAGAACAAGCAAGACAAGACTTG...TCTCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | CAAGCACCGATACCCATGATACATCTTAAAACTTCTATACTCAGACAAAGGAGAGCGATTCAGTTCAGCTaGCATATTATCTTGATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QAPIPMIHLKTSILRQRRAIQFS*HIILIP Trigger: AGGGATCAAGATAATATGCAAGCTGAACTGAATCGC...TCTCCTTTGTCTGAGTATAGAAGTTTTAAGATGTATCATGGGTATCGGTGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS-3UTR CAA 90 bp | CAGAACTTCAAAAGCTTGTCTACTTATCAAAGATCCCCAGACACTGCATTTCCTTCGCAAACTACTGATTaGTTTTTGGTGGGTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QNFKSLSTYQRSPDTAFPSQTTD*FLVGFS Trigger: AGAGAAACCCACCAAAAACAAATCAGTAGTTTGCGA...AGGAAATGCAGTGTCTGGGGATCTTTGATAAGTAGACAAGCTTTTGAAGTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS CCA 72 bp | TCCACGAACTGTGCCCGGGTGAGTTGGCGAGGCCGCTaGATGCTGTCCAGGACGGATCGGCTTTGCAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: STNCARVSWRGR*MLSRTDRLCNL Trigger: CAGATTGCAAAGCCGATCCGTCCTGGACAGCATCCAGCGGCCTCGCCAACTCACCCGGGCACAGTTCGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS TCA 72 bp | CCTCCACCACCACGAAGCCCCACTGGCTGGTTGTTCTaGACAAATGAGCCTCCTCCACGAACTGTGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PPPPRSPTGWLF*TNEPPPRTVPG Trigger: CCCGGGCACAGTTCGTGGAGGAGGCTCATTTGTTCAGAACAACCAGCCAGTGGGGCTTCGTGGTGGTGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS GCA 72 bp | GGTTGTTCTGAACAAATGAGCCTCCTCCACGAACTGTaGCCGGGTGAGTTGGCGAGGCCGCTGGATGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GCSEQMSLLHEL*PGELARPLDAV Trigger: GACAGCATCCAGCGGCCTCGCCAACTCACCCGGGCACAGTTCGTGGAGGAGGCTCATTTGTTCAGAACAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS TCA 72 bp | ACCACGAAGCCCCACTGGCTGGTTGTTCTGAACAAATaGGCCTCCTCCACGAACTGTGCCCGGGTGAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: TTKPHWLVVLNK*ASSTNCARVSW Trigger: CCAACTCACCCGGGCACAGTTCGTGGAGGAGGCTCATTTGTTCAGAACAACCAGCCAGTGGGGCTTCGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS GCA 72 bp | GCCTTCAGCCTCTCATGCTCCACCCTTAGCCGTTCCTaGTCCAACACCATCTTCTGGTTTTGGTCTTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AFSLSCSTLSRS*SNTIFWFWSWR Trigger: CCTCCAAGACCAAAACCAGAAGATGGTGTTGGAGCAGGAACGGCTAAGGGTGGAGCATGAGAGGCTGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS CAA 72 bp | CATAACCGTGAGCTCGTGCAGCTTCCTGCTCTTCTCTaGGTCTGTAGCCTTCAGCCTCTCATGCTCCACCCT | + |
|
Preference number: 6 (lower is better) Translates to: HNRELVQLPALL*VCSLQPLMLHP Trigger: AGGGTGGAGCATGAGAGGCTGAAGGCTACAGACCAAGAGAAGAGCAGGAAGCTGCACGAGCTCACGGTTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS CCA 72 bp | ATAACCGTGAGCTCGTGCAGCTTCCTGCTCTTCTCTTaGTCTGTAGCCTTCAGCCTCTCATGCTCCACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ITVSSCSFLLFS*SVAFSLSCSTL Trigger: AAGGGTGGAGCATGAGAGGCTGAAGGCTACAGACCAAGAGAAGAGCAGGAAGCTGCACGAGCTCACGGTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS CCA 72 bp | TGGACGCGATCATCACCGTGTCTTCTCCCTGGAATTTaGCGACGTACTTATCGCCGCGGTTCACTTCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: WTRSSPCLLPGI*RRTYRRGSLQI Trigger: AATCTGAAGTGAACCGCGGCGATAAGTACGTCGCCAAATTCCAGGGAGAAGACACGGTGATGATCGCGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
||
| CDS CAA 72 bp | TTGGACGCGATCATCACCGTGTCTTCTCCCTGGAATTaGGCGACGTACTTATCGCCGCGGTTCACTTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LDAIITVSSPWN*ATYLSPRFTSD Trigger: ATCTGAAGTGAACCGCGGCGATAAGTACGTCGCCAAATTCCAGGGAGAAGACACGGTGATGATCGCGTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
||
| CDS GCA 72 bp | TGCCACGGTCTCCTCCAAACCCTTCAAGTCTTGTCTTaGTTGTTCTCGTCTGTCTTGCATAACCGTGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CHGLLQTLQVLS*LFSSVLHNREL Trigger: GAGCTCACGGTTATGCAAGACAGACGAGAACAAGCAAGACAAGACTTGAAGGGTTTGGAGGAGACCGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS CAA 72 bp | CACGGTCTCCTCCAAACCCTTCAAGTCTTGTCTTGCTaGTTCTCGTCTGTCTTGCATAACCGTGAGCTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: HGLLQTLQVLSC*FSSVLHNRELV Trigger: CACGAGCTCACGGTTATGCAAGACAGACGAGAACAAGCAAGACAAGACTTGAAGGGTTTGGAGGAGACCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS CAA 90 bp | TTCTTTTGCCACGGTCTCCTCCAAACCCTTCAAGTCTTGTCTTGCTaGTTCTCGTCTGTCTTGCATAACCGTGAGCTCGTGCAGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FFCHGLLQTLQVLSC*FSSVLHNRELVQLP Trigger: AGGAAGCTGCACGAGCTCACGGTTATGCAAGACAGACGAGAACAAGCAAGACAAGACTTGAAGGGTTTGGAGGAGACCGTGGCAAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS CAA 72 bp | ACCCTTCAAGTCTTGTCTTGCTTGTTCTCGTCTGTCTaGCATAACCGTGAGCTCGTGCAGCTTCCTGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: TLQVLSCLFSSV*HNRELVQLPAL Trigger: AAGAGCAGGAAGCTGCACGAGCTCACGGTTATGCAAGACAGACGAGAACAAGCAAGACAAGACTTGAAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS TCA 72 bp | CCAACACCATCTTCTGGTTTTGGTCTTGGAGGTCAGTaGTTAGCTTTTCCTTTGCCTCCACTTCATCTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PTPSSGFGLGGQ*LAFPLPPLHLA Trigger: TGCGAGATGAAGTGGAGGCAAAGGAAAAGCTAATCACTGACCTCCAAGACCAAAACCAGAAGATGGTGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS CCA 72 bp | TTTTCCATTTCATGGACTTTCTCTTGTGCTCGGAGTTaGACTAGCTCCTCACCAAGGGAATCAACAGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: FSISWTFSCARS*TSSSPRESTDS Trigger: GGAGTCTGTTGATTCCCTTGGTGAGGAGCTAGTCCAACTCCGAGCACAAGAGAAAGTCCATGAAATGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS CCA 72 bp | GCTGATAGCGTTTACGGTCTCGAGATGCATTTTCTTTaGCTTCTTTCAGGGCTGACTCCAAAGCTTTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: ADSVYGLEMHFL*LLSGLTPKLSL Trigger: GAGTGAAAGCTTTGGAGTCAGCCCTGAAAGAAGCCAAAGAAAATGCATCTCGAGACCGTAAACGCTATCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
||
| CDS CAA 72 bp | TTCTTTTGCCACGGTCTCCTCCAAACCCTTCAAGTCTaGTCTTGCTTGTTCTCGTCTGTCTTGCATAACCGT | + |
|
Preference number: 6 (lower is better) Translates to: FFCHGLLQTLQV*SCLFSSVLHNR Trigger: ACGGTTATGCAAGACAGACGAGAACAAGCAAGACAAGACTTGAAGGGTTTGGAGGAGACCGTGGCAAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS CAA 72 bp | AGAGCTTACGCAGGTTGTGTAAAGTCTGAAGTTCTTTaGCCACGGTCTCCTCCAAACCCTTCAAGTCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: RAYAGCVKSEVL*PRSPPNPSSLV Trigger: GACAAGACTTGAAGGGTTTGGAGGAGACCGTGGCAAAAGAACTTCAGACTTTACACAACCTGCGTAAGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS CAA 90 bp | CCTGAACAAAGAGCTTACGCAGGTTGTGTAAAGTCTGAAGTTCTTTaGCCACGGTCTCCTCCAAACCCTTCAAGTCTTGTCTTGCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PEQRAYAGCVKSEVL*PRSPPNPSSLVLLV Trigger: AACAAGCAAGACAAGACTTGAAGGGTTTGGAGGAGACCGTGGCAAAAGAACTTCAGACTTTACACAACCTGCGTAAGCTCTTTGTTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS CAA 72 bp | TTATCCGCTGTGAAGGCTTCCAAATTAGCTTTCTCTTaGTCAAACTGCTCATCAATAGGCACTGTCTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: LSAVKASKLAFS*SNCSSIGTVSP Trigger: CGGGGAGACAGTGCCTATTGATGAGCAGTTTGACAAAGAGAAAGCTAATTTGGAAGCCTTCACAGCGGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
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| CDS CAA 72 bp | AGATCTGCATTATCGCGTACCAACTGCTTGTGCACTTaGGTGAGCTGTTCAAGGTTGTTTTCAAGGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RSALSRTNCLCT*VSCSRLFSRKE Trigger: CTCCTTCCTTGAAAACAACCTTGAACAGCTCACCAAAGTGCACAAGCAGTTGGTACGCGATAATGCAGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS CAA 90 bp | GCAATATCTTTATCCGCTGTGAAGGCTTCCAAATTAGCTTTCTCTTaGTCAAACTGCTCATCAATAGGCACTGTCTCCCCGTTACGCCAA | + |
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Preference number: 6 (lower is better) Translates to: AISLSAVKASKLAFS*SNCSSIGTVSPLRQ Trigger: TTGGCGTAACGGGGAGACAGTGCCTATTGATGAGCAGTTTGACAAAGAGAAAGCTAATTTGGAAGCCTTCACAGCGGATAAAGATATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
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| CDS CAA 90 bp | GGAGGCGATTCAGTTCAGCTTGCATATTATCTTGATCCCTTCTGGTaGATGCCAGAAGCTCTTCCTGATCCAGCATTTGTGTCTTCAATT | + |
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Preference number: 6 (lower is better) Translates to: GGDSVQLAYYLDPFW*MPEALPDPAFVSSI Trigger: AATTGAAGACACAAATGCTGGATCAGGAAGAGCTTCTGGCATCAACCAGAAGGGATCAAGATAATATGCAAGCTGAACTGAATCGCCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
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| CDS TCA 72 bp | ACTATTCTTGGAATAATTCCCATGCCTTCTGGATCATaGAGTTTACCCTCCATCGTGTGGGTCTTCCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: TILGIIPMPSGS*SLPSIVWVFPD Trigger: ATCTGGGAAGACCCACACGATGGAGGGTAAACTTCATGATCCAGAAGGCATGGGAATTATTCCAAGAATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
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| CDS TCA 72 bp | GCTTTTCCTTTGCCTCCACTTCATCTCGCAAACTACTaGTTTGTTTTTGGTGGGTTTCTCTGTGACTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: AFPLPPLHLANY*FVFGGFLCDSG Trigger: TCCAGAGTCACAGAGAAACCCACCAAAAACAAATCAGTAGTTTGCGAGATGAAGTGGAGGCAAAGGAAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS TCA 72 bp | CTGCATTATCGCGTACCAACTGCTTGTGCACTTTGGTaGGCTGTTCAAGGTTGTTTTCAAGGAAGGAGATTT | + |
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Preference number: 6 (lower is better) Translates to: LHYRVPTACALW*AVQGCFQGRRF Trigger: AAATCTCCTTCCTTGAAAACAACCTTGAACAGCTCACCAAAGTGCACAAGCAGTTGGTACGCGATAATGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS GCA 72 bp | TCTTTCAGCATCGGTAAAACTACCAGCCATTCCGACTaGAGCAGCTGGTTTATCACTGGTAATAGCAATATC | + |
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Preference number: 6 (lower is better) Translates to: SFSIGKTTSHSD*SSWFITGNSNI Trigger: GATATTGCTATTACCAGTGATAAACCAGCTGCTGCAGTCGGAATGGCTGGTAGTTTTACCGATGCTGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
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| CDS TCA 72 bp | TGCTGCTCAACAGCTTGCTTGACTTCATTTGCAGTCTaGACCTTGTTCAAGTGCTCTTTTTCCATTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: CCSTACLTSFAV*TLFKCSFSISW Trigger: CCATGAAATGGAAAAAGAGCACTTGAACAAGGTTCAGACTGCAAATGAAGTCAAGCAAGCTGTTGAGCAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS CCA 72 bp | ATCTTGCACTATTCTTGGAATAATTCCCATGCCTTCTaGATCATGAAGTTTACCCTCCATCGTGTGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: ILHYSWNNSHAF*IMKFTLHRVGL Trigger: AAGACCCACACGATGGAGGGTAAACTTCATGATCCAGAAGGCATGGGAATTATTCCAAGAATAGTGCAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
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| CDS CCA 72 bp | GACTTGATTTTGGCTTCATGTTGGGAGATCCGAAGCTaGCATGCTGCTAACTCTTTCTCATTTTCTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: DLILASCWEIRS*HAANSFSFSSI Trigger: AATGGAAGAAAATGAGAAAGAGTTAGCAGCATGCCAGCTTCGGATCTCCCAACATGAAGCCAAAATCAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS TCA 72 bp | TTGACACAGACTGTGTTCTTAATTGTTTTGGCCCTTTaGCCAAAGAGGAGTGTTGACTTTGTCTCAGACTCA | + |
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Preference number: 6 (lower is better) Translates to: LTQTVFLIVLAL*PKRSVDFVSDS Trigger: TGAGTCTGAGACAAAGTCAACACTCCTCTTTGGTCAAAGGGCCAAAACAATTAAGAACACAGTCTGTGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
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| CDS GCA 72 bp | TTTTGTTGCTCTCAGTCTGTGTGCTTTCTAGCTGTTTaGAGCGTTTCACCATGGTCTTTACTTCTGATTTCA | + |
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Preference number: 6 (lower is better) Translates to: FCCSQSVCFLAV*SVSPWSLLLIS Trigger: TGAAATCAGAAGTAAAGACCATGGTGAAACGCTGCAAACAGCTAGAAAGCACACAGACTGAGAGCAACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS CAA 72 bp | TTTTTGTTGCTCTCAGTCTGTGTGCTTTCTAGCTGTTaGCAGCGTTTCACCATGGTCTTTACTTCTGATTTC | + |
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Preference number: 6 (lower is better) Translates to: FLLLSVCVLSSC*QRFTMVFTSDF Trigger: GAAATCAGAAGTAAAGACCATGGTGAAACGCTGCAAACAGCTAGAAAGCACACAGACTGAGAGCAACAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025083.14 |
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| CDS CAA 72 bp | CTGATCCAGCATTTGTGTCTTCAATTTCTCTACCAATaGGCTTTGTTGGTTAATCTCTTCATCCTTGTCATC | + |
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Preference number: 6 (lower is better) Translates to: LIQHLCLQFLYQ*ALLVNLFILVI Trigger: GATGACAAGGATGAAGAGATTAACCAACAAAGCCAATTGGTAGAGAAATTGAAGACACAAATGCTGGATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
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| CDS CAA 90 bp | AAGCTCTTCCTGATCCAGCATTTGTGTCTTCAATTTCTCTACCAATaGGCTTTGTTGGTTAATCTCTTCATCCTTGTCATCAAGTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: KLFLIQHLCLQFLYQ*ALLVNLFILVIKLF Trigger: AAACAACTTGATGACAAGGATGAAGAGATTAACCAACAAAGCCAATTGGTAGAGAAATTGAAGACACAAATGCTGGATCAGGAAGAGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
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| CDS CAA 72 bp | TTCTTTGACTTCTTCTTTAGAAGCATCATTTTCTGCTaGGAGGCGATTCAGTTCAGCTTGCATATTATCTTG | + |
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Preference number: 6 (lower is better) Translates to: FFDFFFRSIIFC*EAIQFSLHIIL Trigger: CAAGATAATATGCAAGCTGAACTGAATCGCCTCCAAGCAGAAAATGATGCTTCTAAAGAAGAAGTCAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025083.14 ENSMUST00000163210.2 |
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