Pregenerated sensors for KIF4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034311Ensembl transcript IDs: ENSMUST00000048962.4
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TTTTTAAAATGTGACATTCACTTCAGTAACACGTGTGACAGACAGTaGAAGGGTTTGTCAAGTCTGGCGTTGGAATGGAGCAGGAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: FLKCDIHFSNTCDRQ*KGLSSLALEWSRKA Trigger: AGCTTTCCTGCTCCATTCCAACGCCAGACTTGACAAACCCTTCAACTGTCTGTCACACGTGTTACTGAAGTGAATGTCACATTTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| 3UTR CCA 72 bp | AGACAGTTGAAGGGTTTGTCAAGTCTGGCGTTGGAATaGAGCAGGAAAGCTCCCTGCCCAATTCATGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: RQLKGLSSLALE*SRKAPCPIHEV Trigger: CACCTCATGAATTGGGCAGGGAGCTTTCCTGCTCCATTCCAACGCCAGACTTGACAAACCCTTCAACTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | GCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGAGGGCTGCTTTGCACTTaGGTGTCTGCTTCCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ALPLCASPSDCVHGRQKRGLLCT*VSASPA Trigger: TGCAGGGGAAGCAGACACTCAAGTGCAAAGCAGCCC...TCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | GCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGATCCCGCACCAACCTTTaGAGGAACACCCTTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: ALPLCASPSDCVHGRQKRSRTNL*RNTLGC Trigger: GCATCCAAGGGTGTTCCTGCAAAGGTTGGTGCGGGA...TCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | GCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGATGGCGTAGGGCATGCTaGGTGCTGAAAACATCAGAA | + |
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Preference number: 4 (lower is better) Translates to: ALPLCASPSDCVHGRQKRWRRAC*VLKTSE Trigger: TTCTGATGTTTTCAGCACTCAGCATGCCCTACGCCA...TCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | ATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGTCTGTCATCTGGGATTaGTGCAGCTGGCTGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: ISALPLCASPSDCVHGRQSVIWD*CSWLRR Trigger: CCTTCTCAGCCAGCTGCAGCAATCCCAGATGACAGA...CTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | ATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGGCACGTCAATACAGCTaGCCTTGCTCTGATTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ISALPLCASPSDCVHGRQARQYS*PCSDSG Trigger: GCCTGAATCAGAGCAAGGCCAGCTGTATTGACGTGC...CTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | ATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAGACCTGCTGGTATCTaGGCTGCTTTGCACTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: ISALPLCASPSDCVHGRQRPAGI*AALHLS Trigger: ACTCAAGTGCAAAGCAGCCCAGATACCAGCAGGTCT...CTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | GTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGACAATGGCCCTAAACCTCCTAGAGAATCTTaGAGCAGTCGAGTCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: VPHPRTVSTADRRDNGPKPPRES*SSRVSL Trigger: CAAGCTGACTCGACTGCTTCAAGATTCTCTAGGAGG...TTTAGGGCCATTGTCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | CTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGACGGACACATTACAGTCTaGCTTTTGCTTTCTGCATCC | + |
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Preference number: 4 (lower is better) Translates to: LFPSVPHPRTVSTADRRDGHITV*LLLSAS Trigger: GGATGCAGAAAGCAAAAGTCAGACTGTAATGTGTCC...GTCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | CTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGACGGAAGATATTTCTTGTaGGATGGGGTTTCTGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: LFPSVPHPRTVSTADRRDGRYFL*DGVSVC Trigger: GCAAACAGAAACCCCATCTCACAAGAAATATCTTCC...GTCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | GTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGACAATGGCCCTAAAAGTGTCTGCTTCCCCTaGAGTATCAATGGTTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: VPHPRTVSTADRRDNGPKSVCFP*SINGCS Trigger: ACTGCAACCATTGATACTGCAGGGGAAGCAGACACT...TTTAGGGCCATTGTCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | CTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGACTCTGCAACCTCCTTTTaGTTTTGCAGAGCATCCTTA | + |
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Preference number: 4 (lower is better) Translates to: LFPSVPHPRTVSTADRRDSATSF*FCRASL Trigger: TAAGGATGCTCTGCAAAAGCAAAAGGAGGTTGCAGA...GTCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | ATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGTCACTCAACTTGGCTTaGTTGGCATCCTTCTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: ISALPLCASPSDCVHGRQSLNLA*LASFFA Trigger: AGCAAAGAAGGATGCCAACCAAGCCAAGTTGAGTGA...CTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | AAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGACACTTTTCTCATTTTTACCAACCACCACCTaGGGCTCTCCGGGCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: KGQHSAKVLLLSGTLFSFLPTTT*GSPGTK Trigger: CTTTGTGCCCGGAGAGCCTCAGGTGGTGGTTGGTAA...AAATGAGAAAAGTGTCCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | GAAGGCTTAGATAGTAAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGGTCATCTGGGATTGCTaGAGCTGGCTGAGAAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: EGLDSKGQHSAKVLLLSGVIWDC*SWLRRY Trigger: GTACCTTCTCAGCCAGCTGCAGCAATCCCAGATGAC...CCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTTACTATCTAAGCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | ACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCACTGACTCCTCCAGCTaGTTCTCTGTCATCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: TTEVISALPLCASPSDCVTDSSS*FSVIWD Trigger: ATCCCAGATGACAGAGAAGCAGCTGGAGGAGTCAGT...GACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | AAACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGGGCGCTCACTCAACTTaGCTTGGTTGGCATCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KLLKSLVLFPSVPHPRTVGAHST*LGWHPS Trigger: AGAAGGATGCCAACCAAGCCAAGTTGAGTGAGCGCC...CACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | GAAGGCTTAGATAGTAAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGGAATTGTCCTGGTTCTaGTGGCGGTTGCGACACTTT | + |
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Preference number: 4 (lower is better) Translates to: EGLDSKGQHSAKVLLLSGELSWF*WRLRHF Trigger: AAAGTGTCGCAACCGCCATCAGAACCAGGACAATTC...CCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTTACTATCTAAGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | GTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGACAATGGCCCTAAATTGAGCAGCTCATATTaGCTTTTACGATCCCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: VPHPRTVSTADRRDNGPKLSSSY*LLRSRS Trigger: AGAACGGGATCGTAAAAGGCAATATGAGCTGCTCAA...TTTAGGGCCATTGTCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | ACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCTCAAACAGCATCTTCTaGACGTCAATACAGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: TTEVISALPLCASPSDCVSNSIF*TSIQLA Trigger: GGCCAGCTGTATTGACGTGCAGAAGATGCTGTTTGA...GACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | ATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGTTTTCTTTTAACTCCTaGTCTTCCAATGTCTCCACG | + |
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Preference number: 4 (lower is better) Translates to: ISALPLCASPSDCVHGRQFSFNS*SSNVST Trigger: CGTGGAGACATTGGAAGACCAGGAGTTAAAAGAAAA...CTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | CTAGACTTATCAGGCAGGTCAGTTGGTTCTCTCTCCAGTAGAAGGCTCAATGCCTGGGATTGCTGCAGCTaGCTGAGAAGGTACAACACC | + |
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Preference number: 4 (lower is better) Translates to: LDLSGRSVGSLSSRRLNAWDCCS*LRRYNT Trigger: GGTGTTGTACCTTCTCAGCCAGCTGCAGCAATCCCA...GGCATTGAGCCTTCTACTGGAGAGAGAACCAACTGACCTGCCTGATAAGTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | ATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGATATTTCTTGTGAGATaGGGTTTCTGTTTGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: ISALPLCASPSDCVHGRQIFLVR*GFCLLA Trigger: AGCCAGCAAACAGAAACCCCATCTCACAAGAAATAT...CTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | GAAGGCTTAGATAGTAAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGATTGCTGCAGCTGGCTaGGAAGGTACAACACCTTTT | + |
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Preference number: 4 (lower is better) Translates to: EGLDSKGQHSAKVLLLSGIAAAG*EGTTPF Trigger: AAAAGGTGTTGTACCTTCTCAGCCAGCTGCAGCAAT...CCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTTACTATCTAAGCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | GAAGGCTTAGATAGTAAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGTTCCTTTTCACTAACTaGCTCCTCCAGCTGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: EGLDSKGQHSAKVLLLSGFLFTN*LLQLLL Trigger: GAGAAGCAGCTGGAGGAGTCAGTTAGTGAAAAGGAA...CCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTTACTATCTAAGCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | ATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGGCTTGGAACGAAAGCTaGTATTTTTGTCATTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ISALPLCASPSDCVHGRQAWNES*YFCHSS Trigger: AGAAGAATGACAAAAATAGCAGCTTTCGTTCCAAGC...CTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | AAACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGCAATGGTTGCAGTCATaGAAGCAGCAGCTTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: KLLKSLVLFPSVPHPRTVQWLQS*KQQLHQ Trigger: CTGATGAAGCTGCTGCTTGCATGACTGCAACCATTG...CACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | GTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGACAATGGCCCTAAAGTTGGCATCCTTCTTTaGTGTTTGAAGTTCAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: VPHPRTVSTADRRDNGPKVGILL*CLKFKN Trigger: GTTCTTGAACTTCAAACAGCAAAGAAGGATGCCAAC...TTTAGGGCCATTGTCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | CTAGACTTATCAGGCAGGTCAGTTGGTTCTCTCTCCAGTAGAAGGCTCAATGCCACGTTTGTTGGCAGCTaGTGCCTCCTCAGTTTTACG | + |
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Preference number: 4 (lower is better) Translates to: LDLSGRSVGSLSSRRLNATFVGS*CLLSFT Trigger: CGTAAAACTGAGGAGGCAGCAGCTGCCAACAAACGT...GGCATTGAGCCTTCTACTGGAGAGAGAACCAACTGACCTGCCTGATAAGTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | ACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCTGCTCACACACTTCTTaGATCTTCCTAAGCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: TTEVISALPLCASPSDCVCSHTS*IFLSSS Trigger: GGAAGAGCTTAGGAAGATGCAAGAAGTGTGTGAGCA...GACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | CTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGACTCTTCTTCTTCCCTATaGCCTTATTTTCTTGTGATT | + |
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Preference number: 4 (lower is better) Translates to: LFPSVPHPRTVSTADRRDSSSSL*PYFLVI Trigger: AATCACAAGAAAATAAGGCCATAGGGAAGAAGAAGA...GTCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| 3UTR CAA 72 bp | TGTGACAGACAGTTGAAGGGTTTGTCAAGTCTGGCGTaGGAATGGAGCAGGAAAGCTCCCTGCCCAATTCAT | + |
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Preference number: 4 (lower is better) Translates to: CDRQLKGLSSLA*EWSRKAPCPIH Trigger: ATGAATTGGGCAGGGAGCTTTCCTGCTCCATTCCAACGCCAGACTTGACAAACCCTTCAACTGTCTGTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | ACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCACCTCCTTTTGCTTTTaGAGAGCATCCTTAAGACGT | + |
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Preference number: 4 (lower is better) Translates to: TTEVISALPLCASPSDCVTSFCF*RASLRR Trigger: ACGTCTTAAGGATGCTCTGCAAAAGCAAAAGGAGGT...GACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | CTAGACTTATCAGGCAGGTCAGTTGGTTCTCTCTCCAGTAGAAGGCTCAATGCCGGTACTGGAACTGAATaGGCTGGAGTTGGTTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LDLSGRSVGSLSSRRLNAGTGTE*AGVGCH Trigger: ATGACAACCAACTCCAGCCCATTCAGTTCCAGTACC...GGCATTGAGCCTTCTACTGGAGAGAGAACCAACTGACCTGCCTGATAAGTCTAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | ACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCTATAGACTTCAGTTCTaGGTGGTCAGAAGAAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: TTEVISALPLCASPSDCVYRLQF*VVRRRD Trigger: GTCTCTTCTTCTGACCACCCAGAACTGAAGTCTATA...GACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | AAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGACACTTTTCTCATTTCTAAGCTCTTCCTCCTaGCATTTTAGTGTGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: KGQHSAKVLLLSGTLFSFLSSSS*HFSVLS Trigger: GCTGAGCACACTAAAATGTCAGGAGGAAGAGCTTAG...AAATGAGAAAAGTGTCCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | AAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGACACTTTTCTCATTTTGCTTCAGCTGCACCTaGTCTGCATCACACATTTCT | + |
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Preference number: 4 (lower is better) Translates to: KGQHSAKVLLLSGTLFSFCFSCT*SASHIS Trigger: AGAAATGTGTGATGCAGATCAGGTGCAGCTGAAGCA...AAATGAGAAAAGTGTCCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | AAACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTACAACACCTTTTCTTaGTGCTGTTGCTCCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: KLLKSLVLFPSVPHPRTVYNTFS*CCCSTL Trigger: CAAAGTGGAGCAACAGCACCAAGAAAAGGTGTTGTA...CACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | AAAGAAGAACATGTCGGCCTTAGTTCCATGAAGAGACAATTCAACTGCTCACAAGGCCACAGAAGGCTCTaGATAATACTGCAGCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: KEEHVGLSSMKRQFNCSQGHRRL*IILQPL Trigger: GAGGGGCTGCAGTATTATTCAGAGCCTTCTGTGGCC...TTGTGAGCAGTTGAATTGTCTCTTCATGGAACTAAGGCCGACATGTTCTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | AAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGACACTTTTCTCATTTTTTGCACTTGAGTGTCTaGTTCCCCTGCAGTATCAAT | + |
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Preference number: 4 (lower is better) Translates to: KANTQPRSSSFQGHFSHFLHLSV*FPCSIN Trigger: ATTGATACTGCAGGGGAAGCAGACACTCAAGTGCAA...AAAATGAGAAAAGTGTCCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | ACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCCACTAAATACTTTATaGCACATTTGGCTTCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: TTEVISALPLCASPSDCVPLNTL*HIWLRE Trigger: TTCTCGAAGCCAAATGTGCCATAAAGTATTTAGTGG...GACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | AAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGACACTTTTCTCATTTTTTTCCCTCTGTAGACTaGGGACTTCTGATTCTAGAT | + |
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Preference number: 4 (lower is better) Translates to: KANTQPRSSSFQGHFSHFFPSVD*GLLILD Trigger: ATCTAGAATCAGAAGTCCTCAGTCTACAGAGGGAAA...AAAATGAGAAAAGTGTCCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTT 46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | ATAGCAAGACCTAAAACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCAGGGTCAGTTTCTGCTTaGTGGCACTGTTTTCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: IARPKTTEVISALPLCASGSVSA*WHCFLG Trigger: TCCAAGAAAACAGTGCCATCAAGCAGAAACTGACCC...TGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGTTTTAGGTCTTGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | AAACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTGGGATCTTCCAGTTTaGAAGAGTTTTCAGAATCTT | + |
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Preference number: 4 (lower is better) Translates to: KLLKSLVLFPSVPHPRTVWDLPV*KSFQNL Trigger: AAGATTCTGAAAACTCTTTCAAACTGGAAGATCCCA...CACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | AAATGTGACATTCACTTCAGTAACACGTGTGACAGACAGTTGAAGGGTTTGTCATGTAGGTCCGCAATCTaGGCACTCCTGAGCTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: KCDIHFSNTCDRQLKGLSCRSAI*ALLSSN Trigger: ATTGGAGCTCAGGAGTGCGCAGATTGCGGACCTACA...TGACAAACCCTTCAACTGTCTGTCACACGTGTTACTGAAGTGAATGTCACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | AAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGACACTTTTCTCATTTTAGTAGGGTCAGTTTCTaGTTGATGGCACTGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: KANTQPRSSSFQGHFSHFSRVSF*LMALFS Trigger: AGAAAACAGTGCCATCAAGCAGAAACTGACCCTACT...AAAATGAGAAAAGTGTCCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | CTAGACTTATCAGGCAGGTCAGTTGGTTCTCTCTCCAGTAGAAGGCTCAATGCCGAAGAGTCTGGAGACTaGAAGATATTTCTTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LDLSGRSVGSLSSRRLNAEESGD*KIFLVR Trigger: TCTCACAAGAAATATCTTCCAGTCTCCAGACTCTTC...GGCATTGAGCCTTCTACTGGAGAGAGAACCAACTGACCTGCCTGATAAGTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | ATAGCAAGACCTAAAACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCATGCTCTGATTCAGGCTaGTTTCTAGTTTGCTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: IARPKTTEVISALPLCASCSDSG*FLVCSP Trigger: TGGTGAGCAAACTAGAAAGCAGCCTGAATCAGAGCA...TGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGTTTTAGGTCTTGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | AAAGAAGAACATGTCGGCCTTAGTTCCATGAAGAGACAATTCAACTGCTCACAAGATGGGGTTTCTGTTTaGTGGCTACTTGGAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KEEHVGLSSMKRQFNCSQDGVSV*WLLGVG Trigger: CCCTACTCCAAGTAGCCAGCAAACAGAAACCCCATC...TTGTGAGCAGTTGAATTGTCTCTTCATGGAACTAAGGCCGACATGTTCTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | GCAGGTCAGTTGGTTCTCTCTCCAGTAGAAGGCTCAATGCCTTCTAGAGAAGCATTCAAAGGAAGAGTCTaGAGACTGGAAGATATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGQLVLSPVEGSMPSREAFKGRV*RLEDIS Trigger: AGAAATATCTTCCAGTCTCCAGACTCTTCCTTTGAA...TGCTTCTCTAGAAGGCATTGAGCCTTCTACTGGAGAGAGAACCAACTGACCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | AAATGTGACATTCACTTCAGTAACACGTGTGACAGACAGTTGAAGGGTTTGTCACACTCCTCATCAGCATaGTCGTCACTGTCCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KCDIHFSNTCDRQLKGLSHSSSA*SSLSSL Trigger: CAATGAGGACAGTGACGACCATGCTGATGAGGAGTG...TGACAAACCCTTCAACTGTCTGTCACACGTGTTACTGAAGTGAATGTCACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | GAAGGCTTAGATAGTAAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGGAGTTTTCAGAATCTTaGTTTAGCTCAATAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EGLDSKGQHSAKVLLLSGEFSES*FSSIAS Trigger: AGATGCTATTGAGCTAAACCAAGATTCTGAAAACTC...CCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTTACTATCTAAGCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CCA 90 bp | AAATGTGACATTCACTTCAGTAACACGTGTGACAGACAGTTGAAGGGTTTGTCAAGAAGCTGGTATTGCTaGCCAGAGCTCGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCDIHFSNTCDRQLKGLSRSWYC*PELASS Trigger: AGAAGAAGCGAGCTCTGGCCAGCAATACCAGCTTCT...TGACAAACCCTTCAACTGTCTGTCACACGTGTTACTGAAGTGAATGTCACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGACACTTTTCTCATTTGGACTGAAGATTTTCTaGTGGTTCCACATTTATATC | + |
|
Preference number: 4 (lower is better) Translates to: KGQHSAKVLLLSGTLFSFGLKIF*WFHIYI Trigger: GATATAAATGTGGAACCATCAGAAAATCTTCAGTCC...AAATGAGAAAAGTGTCCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR TCA 90 bp | AAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGACACTTTTCTCATTTTTCTATCTTAGCAAAATaGTTTTGCTCCTCAAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KANTQPRSSSFQGHFSHFSILAK*FCSSNS Trigger: GCTGTTTGAGGAGCAAAATCATTTTGCTAAGATAGA...AAAATGAGAAAAGTGTCCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS-3UTR GCA 90 bp | AAAGAAGAACATGTCGGCCTTAGTTCCATGAAGAGACAATTCAACTGCTCACAATGTAGCAGCAAGATCTaGAGCTGTTGGACCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KEEHVGLSSMKRQFNCSQCSSKI*SCWTCC Trigger: ACAACAGGTCCAACAGCTGCAGATCTTGCTGCTACA...TTGTGAGCAGTTGAATTGTCTCTTCATGGAACTAAGGCCGACATGTTCTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS-3UTR GCA 90 bp | AAAGAAGAACATGTCGGCCTTAGTTCCATGAAGAGACAATTCAACTGCTCACAACCTGACATTTTAGTGTaGTCAGCAGCTGCTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KEEHVGLSSMKRQFNCSQPDILV*SAAAVP Trigger: AGGAACAGCAGCTGCTGAGCACACTAAAATGTCAGG...TTGTGAGCAGTTGAATTGTCTCTTCATGGAACTAAGGCCGACATGTTCTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS-3UTR CCA 90 bp | AAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGACACTTTTCTCATTTTAGGTTTGGGCTTAGGTaGAATATATTCAAAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KANTQPRSSSFQGHFSHFRFGLR*NIFKGR Trigger: TCTTCCTTTGAATATATTCCACCTAAGCCCAAACCT...AAAATGAGAAAAGTGTCCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS-3UTR GCA 90 bp | AAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGACACTTTTCTCATTTTCATTCTTCTTCCTTTaGTCAATGGAGATTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGQHSAKVLLLSGTLFSFSFFFL*SMEIVK Trigger: CTTTACAATCTCCATTGAGCAAAGGAAGAAGAATGA...AAATGAGAAAAGTGTCCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS-3UTR GCA 90 bp | AAATGTGACATTCACTTCAGTAACACGTGTGACAGACAGTTGAAGGGTTTGTCAATTCTTCATTCTAGCTaGAGTGCTTTCCATCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: KCDIHFSNTCDRQLKGLSILHSS*SAFHPT Trigger: CGTGGGATGGAAAGCACTGCAGCTAGAATGAAGAAT...TGACAAACCCTTCAACTGTCTGTCACACGTGTTACTGAAGTGAATGTCACATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR GCA 90 bp | AAAGAAGAACATGTCGGCCTTAGTTCCATGAAGAGACAATTCAACTGCTCACAATTTCTTTTAGGATCTTaGTACTGGGAGTTGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KEEHVGLSSMKRQFNCSQFLLGS*YWELHR Trigger: TCTGTGCAACTCCCAGTAGCAAGATCCTAAAAGAAA...TTGTGAGCAGTTGAATTGTCTCTTCATGGAACTAAGGCCGACATGTTCTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | GCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGAGCATCCTTAAGACGTTaGTTGGCAGCTGCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALPLCASPSDCVHGRQKRASLRR*LAAAAS Trigger: GGAGGCAGCAGCTGCCAACAAACGTCTTAAGGATGC...TCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS-3UTR CAA 90 bp | GCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGATTCTGCAACCTCCTTTaGCTTTTGCAGAGCATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ALPLCASPSDCVHGRQKRFCNLL*LLQSIL Trigger: AAGGATGCTCTGCAAAAGCAAAAGGAGGTTGCAGAA...TCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | CTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGACAGGCTGCTTTCTAGTTaGCTCACCAGTATTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LFPSVPHPRTVSTADRRDRLLSS*LTSILE Trigger: CTCCAAAATACTGGTGAGCAAACTAGAAAGCAGCCT...GTCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | GCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGACTCTTCTTGGACACCTaGACTAGTTTTGTTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: ALPLCASPSDCVHGRQKRLFLDT*TSFVGI Trigger: GATCCCAACAAAACTAGTCAAGGTGTCCAAGAAGAG...TCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | ACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCTTCCCGCACCAACCTTaGCAGGAACACCCTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TTEVISALPLCASPSDCVFPHQP*QEHPWM Trigger: CATCCAAGGGTGTTCCTGCAAAGGTTGGTGCGGGAA...GACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | GCAGGTCAGTTGGTTCTCTCTCCAGTAGAAGGCTCAATGCCTTCTAGAGAAGCATGGGCTGCTTTGCACTaGAGTGTCTGCTTCCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGQLVLSPVEGSMPSREAWAALH*SVCFPC Trigger: GCAGGGGAAGCAGACACTCAAGTGCAAAGCAGCCCA...TGCTTCTCTAGAAGGCATTGAGCCTTCTACTGGAGAGAGAACCAACTGACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | AAACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGCTCTGTCATCTGGGATaGCTGCAGCTGGCTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KLLKSLVLFPSVPHPRTVLCHLG*LQLAEK Trigger: CTTCTCAGCCAGCTGCAGCAATCCCAGATGACAGAG...CACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CCA 90 bp | TTGGACACCTTGACTAGTTTTGTTGGGATCCACTCCTCATCAGCATaGTCGTCACTGTCCTCATTGTCCTGCTCGGCCACAGAAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LDTLTSFVGIHSSSA*SSLSSLSCSATEGS Trigger: AGAGCCTTCTGTGGCCGAGCAGGACAATGAGGACAGTGACGACCATGCTGATGAGGAGTGGATCCCAACAAAACTAGTCAAGGTGTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | AAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGACACTTTTCTCATTTTCGGCGCTCACTCAACTaGGCTTGGTTGGCATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KANTQPRSSSFQGHFSHFRRSLN*AWLASF Trigger: GAAGGATGCCAACCAAGCCAAGTTGAGTGAGCGCCG...AAAATGAGAAAAGTGTCCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | GTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGACAATGGCCCTAAAGTACAACACCTTTTCTaGGTGCTGTTGCTCCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: VPHPRTVSTADRRDNGPKVQHLF*VLLLHF Trigger: AAAGTGGAGCAACAGCACCAAGAAAAGGTGTTGTAC...TTTAGGGCCATTGTCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | GAAGGCTTAGATAGTAAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGCTTTCTGCATCCACATaGCTTGTTCCCGCACCAACC | + |
|
Preference number: 5 (lower is better) Translates to: EGLDSKGQHSAKVLLLSGLSAST*LVPAPT Trigger: GGTTGGTGCGGGAACAAGCAATGTGGATGCAGAAAG...CCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTTACTATCTAAGCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | ATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGCATTTTCTCATTTGCTaGCTCTGTCAGAATGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: ISALPLCASPSDCVHGRQHFLIC*LCQNDP Trigger: AGGATCATTCTGACAGAGCAAGCAAATGAGAAAATG...CTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | GAAGGCTTAGATAGTAAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGCTCACTCAACTTGGCTaGGTTGGCATCCTTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EGLDSKGQHSAKVLLLSGLTQLG*VGILLC Trigger: GCAAAGAAGGATGCCAACCAAGCCAAGTTGAGTGAG...CCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTTACTATCTAAGCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | AAACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGATCTCCTGGTTCAGCTaGGAGACAGTATGCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KLLKSLVLFPSVPHPRTVISWFS*ETVCSV Trigger: CACAGAGCATACTGTCTCCAAGCTGAACCAGGAGAT...CACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CCA 90 bp | TTTTGGAGGAGACGAGCTCTCCCACTAAATACTTTATGGCACATTTaGCTTCGAGAATTGTGGCGATACTCTCCCAGCGCTGTTTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FWRRRALPLNTLWHI*LRELWRYSPSAVSA Trigger: GGCCGAAACAGCGCTGGGAGAGTATCGCCACAATTCTCGAAGCCAAATGTGCCATAAAGTATTTAGTGGGAGAGCTCGTCTCCTCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | GAAGGCTTAGATAGTAAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGTGTCTCCACGAGCTTTaGAAGATCCACTTTACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EGLDSKGQHSAKVLLLSGCLHEL*KIHFTG Trigger: GCCTGTAAAGTGGATCTTCAAAAGCTCGTGGAGACA...CCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTTACTATCTAAGCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | GAAGGCTTAGATAGTAAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGTCTTTTCTCTTTGAGTaGTGCCACATCCTGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGLDSKGQHSAKVLLLSGSFLFE*CHILSQ Trigger: CTGGCTCAGGATGTGGCACAACTCAAAGAGAAAAGA...CCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTTACTATCTAAGCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | GTGCCTCACCCTCGGACTGTGTCCACGGCAGACAGAAGAGACAATGGCCCTAAAGTGGGATCTTCCAGTTaGAAAGAGTTTTCAGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: VPHPRTVSTADRRDNGPKVGSSS*KEFSES Trigger: AGATTCTGAAAACTCTTTCAAACTGGAAGATCCCAC...TTTAGGGCCATTGTCTCTTCTGTCTGCCGTGGACACAGTCCGAGGGTGAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS TCA 90 bp | GGGTGGTCAGAAGAAGAGACAAACACGGGCTGCTTCAGCTGCACCTaGTCTGCATCACACATTTCTTTTAGGATCTTGCTACTGGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GWSEEETNTGCFSCT*SASHISFRILLLGV Trigger: AACTCCCAGTAGCAAGATCCTAAAAGAAATGTGTGATGCAGATCAGGTGCAGCTGAAGCAGCCCGTGTTTGTCTCTTCTTCTGACCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | ACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGTCTTCAGCTTCAGAAGTTaGGACTGTTCTTGCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TTEVISALPLCASPSDCVFSFRS*DCSCSF Trigger: GAAACTGCAAGAACAGTCCAAACTTCTGAAGCTGAA...GACACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | AAACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCACCCTCGGACTGTGAACCTCCTTTTGCTTTaGCAGAGCATCCTTAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: KLLKSLVLFPSVPHPRTVNLLLL*QSILKT Trigger: CGTCTTAAGGATGCTCTGCAAAAGCAAAAGGAGGTT...CACAGTCCGAGGGTGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS-3UTR CAA 90 bp | GCAGGTCAGTTGGTTCTCTCTCCAGTAGAAGGCTCAATGCCTTCTAGAGAAGCAAGGGTCAGTTTCTGCTaGATGGCACTGTTTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGQLVLSPVEGSMPSREARVSFC*MALFSW Trigger: CCAAGAAAACAGTGCCATCAAGCAGAAACTGACCCT...TGCTTCTCTAGAAGGCATTGAGCCTTCTACTGGAGAGAGAACCAACTGACCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CCA 90 bp | TCACCAGTATTTTGGAGGAGACGAGCTCTCCCACTAAATACTTTATaGCACATTTGGCTTCGAGAATTGTGGCGATACTCTCCCAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPVFWRRRALPLNTL*HIWLRELWRYSPSA Trigger: AGCGCTGGGAGAGTATCGCCACAATTCTCGAAGCCAAATGTGCCATAAAGTATTTAGTGGGAGAGCTCGTCTCCTCCAAAATACTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS-3UTR CAA 90 bp | ATAGCAAGACCTAAAACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCATCCTTAAGACGTTTGTaGGCAGCTGCTGCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IARPKTTEVISALPLCASSLRRL*AAAASS Trigger: TGAGGAGGCAGCAGCTGCCAACAAACGTCTTAAGGA...TGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGTTTTAGGTCTTGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS-3UTR CAA 90 bp | CTAGACTTATCAGGCAGGTCAGTTGGTTCTCTCTCCAGTAGAAGGCTCAATGCCCCTTGGATGCTCTTCTaGGACACCTTGACTAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LDLSGRSVGSLSSRRLNAPWMLF*DTLTSF Trigger: AAAACTAGTCAAGGTGTCCAAGAAGAGCATCCAAGG...GGCATTGAGCCTTCTACTGGAGAGAGAACCAACTGACCTGCCTGATAAGTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS-3UTR CAA 90 bp | AAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGACACTTTTCTCATTTGATGGCACTGTTTTCTaGGAGAAGCTGCTGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KGQHSAKVLLLSGTLFSFDGTVF*EKLLIL Trigger: CAAAATCAGCAGCTTCTCCAAGAAAACAGTGCCATC...AAATGAGAAAAGTGTCCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS CCA 90 bp | CCTTGCTCTGATTCAGGCTGCTTTCTAGTTTGCTCACCAGTATTTTaGAGGAGACGAGCTCTCCCACTAAATACTTTATGGCACATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PCSDSGCFLVCSPVF*RRRALPLNTLWHIW Trigger: CCAAATGTGCCATAAAGTATTTAGTGGGAGAGCTCGTCTCCTCCAAAATACTGGTGAGCAAACTAGAAAGCAGCCTGAATCAGAGCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS-3UTR CAA 90 bp | GAAGGCTTAGATAGTAAAGGCCAACACTCAGCCAAGGTCCTCCTCCTTTCAGGGCTTAGCAAAATGATTTaGCTCCTCAAACAGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: EGLDSKGQHSAKVLLLSGLSKMI*LLKQHL Trigger: AAGATGCTGTTTGAGGAGCAAAATCATTTTGCTAAG...CCCTGAAAGGAGGAGGACCTTGGCTGAGTGTTGGCCTTTACTATCTAAGCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS CCA 90 bp | GCGGCAAGGTTTGGGCTTAGGTGGAATATATTCAAAGGAAGAGTCTaGAGACTGGAAGATATTTCTTGTGAGATGGGGTTTCTGTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AARFGLRWNIFKGRV*RLEDISCEMGFLFA Trigger: AGCAAACAGAAACCCCATCTCACAAGAAATATCTTCCAGTCTCCAGACTCTTCCTTTGAATATATTCCACCTAAGCCCAAACCTTGCCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS-3UTR CAA 90 bp | AAAGAAGAACATGTCGGCCTTAGTTCCATGAAGAGACAATTCAACTGCTCACAAGCCAGGACAGTTGCATaGTATCCTTTAAACACGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KEEHVGLSSMKRQFNCSQARTVA*YPLNTP Trigger: AGGCGTGTTTAAAGGATACAATGCAACTGTCCTGGC...TTGTGAGCAGTTGAATTGTCTCTTCATGGAACTAAGGCCGACATGTTCTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
||
| CDS-3UTR CAA 90 bp | ATAGCAAGACCTAAAACTACTGAAGTCATTAGTGCTCTTCCCCTCTGTGCCTCAATTTCTTTTAGGATCTaGCTACTGGGAGTTGCACAG | + |
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Preference number: 5 (lower is better) Translates to: IARPKTTEVISALPLCASISFRI*LLGVAQ Trigger: CTGTGCAACTCCCAGTAGCAAGATCCTAAAAGAAAT...TGAGGCACAGAGGGGAAGAGCACTAATGACTTCAGTAGTTTTAGGTCTTGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | AAAGAAGAACATGTCGGCCTTAGTTCCATGAAGAGACAATTCAACTGCTCACAAGGTTGGCATCCTTCTTaGCTGTTTGAAGTTCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: KEEHVGLSSMKRQFNCSQGWHPS*LFEVQE Trigger: TTCTTGAACTTCAAACAGCAAAGAAGGATGCCAACC...TTGTGAGCAGTTGAATTGTCTCTTCATGGAACTAAGGCCGACATGTTCTTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS-3UTR CAA 90 bp | AAAGAAGAACATGTCGGCCTTAGTTCCATGAAGAGACAATTCAACTGCTCACAAAGCTGGATTACTTCTTaGTCTTTTTGCTGCTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: KEEHVGLSSMKRQFNCSQSWITS*SFCCFH Trigger: ATGGAAGCAGCAAAAAGACAAAGAAGTAATCCAGCT...TTGTGAGCAGTTGAATTGTCTCTTCATGGAACTAAGGCCGACATGTTCTTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS TCA 72 bp | ACTGTCCTCATTGTCCTGCTCGGCCACAGAAGGCTCTaGATAATACTGCAGCCCCTCGACGGCGAAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: TVLIVLLGHRRL*IILQPLDGEAL Trigger: CAAAGCTTCGCCGTCGAGGGGCTGCAGTATTATTCAGAGCCTTCTGTGGCCGAGCAGGACAATGAGGACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS GCA 72 bp | TTCTGCATCCACATTGCTTGTTCCCGCACCAACCTTTaGAGGAACACCCTTGGATGCTCTTCTTGGACACCT | + |
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Preference number: 6 (lower is better) Translates to: FCIHIACSRTNL*RNTLGCSSWTP Trigger: AGGTGTCCAAGAAGAGCATCCAAGGGTGTTCCTGCAAAGGTTGGTGCGGGAACAAGCAATGTGGATGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CCA 72 bp | TTGACTAGTTTTGTTGGGATCCACTCCTCATCAGCATaGTCGTCACTGTCCTCATTGTCCTGCTCGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: LTSFVGIHSSSA*SSLSSLSCSAT Trigger: TGTGGCCGAGCAGGACAATGAGGACAGTGACGACCATGCTGATGAGGAGTGGATCCCAACAAAACTAGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CAA 90 bp | CGAGCTCTCCCACTAAATACTTTATGGCACATTTGGCTTCGAGAATaGTGGCGATACTCTCCCAGCGCTGTTTCGGCCGGTCTTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: RALPLNTLWHIWLRE*WRYSPSAVSAGLHF Trigger: AAAGTGAAGACCGGCCGAAACAGCGCTGGGAGAGTATCGCCACAATTCTCGAAGCCAAATGTGCCATAAAGTATTTAGTGGGAGAGCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CAA 90 bp | TTGTTCCCGCACCAACCTTTGCAGGAACACCCTTGGATGCTCTTCTaGGACACCTTGACTAGTTTTGTTGGGATCCACTCCTCATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LFPHQPLQEHPWMLF*DTLTSFVGIHSSSA Trigger: TGCTGATGAGGAGTGGATCCCAACAAAACTAGTCAAGGTGTCCAAGAAGAGCATCCAAGGGTGTTCCTGCAAAGGTTGGTGCGGGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CCA 72 bp | TTTAGGATCTTGCTACTGGGAGTTGCACAGATAGGGTaGAAGAAGCTTAAGCCTGAGGTCACCTCTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: FRILLLGVAQIG*KKLKPEVTSVG Trigger: TCCCACAGAGGTGACCTCAGGCTTAAGCTTCTTCCACCCTATCTGTGCAACTCCCAGTAGCAAGATCCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CAA 72 bp | CACCAACCTTTGCAGGAACACCCTTGGATGCTCTTCTaGGACACCTTGACTAGTTTTGTTGGGATCCACTCC | + |
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Preference number: 6 (lower is better) Translates to: HQPLQEHPWMLF*DTLTSFVGIHS Trigger: GGAGTGGATCCCAACAAAACTAGTCAAGGTGTCCAAGAAGAGCATCCAAGGGTGTTCCTGCAAAGGTTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CAA 90 bp | ATTTTGGAGGAGACGAGCTCTCCCACTAAATACTTTATGGCACATTaGGCTTCGAGAATTGTGGCGATACTCTCCCAGCGCTGTTTCGGC | + |
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Preference number: 6 (lower is better) Translates to: ILEETSSPTKYFMAH*ASRIVAILSQRCFG Trigger: GCCGAAACAGCGCTGGGAGAGTATCGCCACAATTCTCGAAGCCAAATGTGCCATAAAGTATTTAGTGGGAGAGCTCGTCTCCTCCAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS TCA 72 bp | TTCATTCTAGCTGCAGTGCTTTCCATCCCACGGCTCTaGGTCTCTTTGCGTTTTTCTGCAACCTCCTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: FILAAVLSIPRL*VSLRFSATSFC Trigger: GCAAAAGGAGGTTGCAGAAAAACGCAAAGAGACTCAGAGCCGTGGGATGGAAAGCACTGCAGCTAGAATGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS TCA 72 bp | GAAGAAGAGACAAACACGGGCTGCTTCAGCTGCACCTaGTCTGCATCACACATTTCTTTTAGGATCTTGCTA | + |
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Preference number: 6 (lower is better) Translates to: EEETNTGCFSCT*SASHISFRILL Trigger: TAGCAAGATCCTAAAAGAAATGTGTGATGCAGATCAGGTGCAGCTGAAGCAGCCCGTGTTTGTCTCTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CAA 72 bp | GGACTGTTCTTGCAGTTTCTTTTTCAAATCAGCTATTaGACCCTCCAGTTCCTGAAGACGTTTACGACGGCG | + |
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Preference number: 6 (lower is better) Translates to: GLFLQFLFQISY*TLQFLKTFTTA Trigger: CGCCGTCGTAAACGTCTTCAGGAACTGGAGGGTCAAATAGCTGATTTGAAAAAGAAACTGCAAGAACAGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CCA 72 bp | TTTTGGAGGAGACGAGCTCTCCCACTAAATACTTTATaGCACATTTGGCTTCGAGAATTGTGGCGATACTCT | + |
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Preference number: 6 (lower is better) Translates to: FWRRRALPLNTL*HIWLRELWRYS Trigger: AGAGTATCGCCACAATTCTCGAAGCCAAATGTGCCATAAAGTATTTAGTGGGAGAGCTCGTCTCCTCCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CCA 72 bp | GATTCAGGCTGCTTTCTAGTTTGCTCACCAGTATTTTaGAGGAGACGAGCTCTCCCACTAAATACTTTATGG | + |
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Preference number: 6 (lower is better) Translates to: DSGCFLVCSPVF*RRRALPLNTLW Trigger: CCATAAAGTATTTAGTGGGAGAGCTCGTCTCCTCCAAAATACTGGTGAGCAAACTAGAAAGCAGCCTGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CAA 90 bp | TGGAAGAAGCTTAAGCCTGAGGTCACCTCTGTGGGATCTTCCAGTTaGAAAGAGTTTTCAGAATCTTGGTTTAGCTCAATAGCATCTGAA | + |
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Preference number: 6 (lower is better) Translates to: WKKLKPEVTSVGSSS*KEFSESWFSSIASE Trigger: TTCAGATGCTATTGAGCTAAACCAAGATTCTGAAAACTCTTTCAAACTGGAAGATCCCACAGAGGTGACCTCAGGCTTAAGCTTCTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CAA 72 bp | CTTTGCTCTAGGCATTTTTCCTTAATGCGGCAAGGTTaGGGCTTAGGTGGAATATATTCAAAGGAAGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: LCSRHFSLMRQG*GLGGIYSKEES Trigger: AGACTCTTCCTTTGAATATATTCCACCTAAGCCCAAACCTTGCCGCATTAAGGAAAAATGCCTAGAGCAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CAA 72 bp | CTTAAGCCTGAGGTCACCTCTGTGGGATCTTCCAGTTaGAAAGAGTTTTCAGAATCTTGGTTTAGCTCAATA | + |
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Preference number: 6 (lower is better) Translates to: LKPEVTSVGSSS*KEFSESWFSSI Trigger: TATTGAGCTAAACCAAGATTCTGAAAACTCTTTCAAACTGGAAGATCCCACAGAGGTGACCTCAGGCTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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| CDS CCA 72 bp | TTTGGGCTTAGGTGGAATATATTCAAAGGAAGAGTCTaGAGACTGGAAGATATTTCTTGTGAGATGGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: FGLRWNIFKGRV*RLEDISCEMGF Trigger: AAACCCCATCTCACAAGAAATATCTTCCAGTCTCCAGACTCTTCCTTTGAATATATTCCACCTAAGCCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048962.4 |
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