Pregenerated sensors for KIF3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018395Ensembl transcript IDs: ENSMUST00000057330.15, ENSMUST00000118353.9, ENSMUST00000120613.9, ENSMUST00000130037.2, ENSMUST00000132496.3, ENSMUST00000132653.2, ENSMUST00000173744.8
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACATTCACGTACAACAACGGAACCCTTACTTCCTGCAGAGCAGTGTaGCAGACACAGTGCGCCATGCCCAACGACCATGAGCTGCGGCGC | + |
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Preference number: 1 (lower is better) Translates to: TFTYNNGTLTSCRAV*QTQCAMPNDHELRR Trigger: GCGCCGCAGCTCATGGTCGTTGGGCATGGCGCACTGTGTCTGTCACACTGCTCTGCAGGAAGTAAGGGTTCCGTTGTTGTACGTGAATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| 3UTR TCA 90 bp | CTGGCTTCAGGAGAAGTGGGGAGCCAACTTAGTAACAACAATGGCTaGATGTGGAGTCAGAGCTACAGAAGTGGAGGGTGCACAGGCGAG | + |
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Preference number: 1 (lower is better) Translates to: LASGEVGSQLSNNNG*MWSQSYRSGGCTGE Trigger: CTCGCCTGTGCACCCTCCACTTCTGTAGCTCTGACTCCACATTCAGCCATTGTTGTTACTAAGTTGGCTCCCCACTTCTCCTGAAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| 3UTR GCA 90 bp | TATGTTGTGTGCAAACAAGACAGACTTGGTTCTAGTCTGAGATTCTaGTTGTCTAGAGCCACGGTAGTTGAATACATAGCTAAGAAACGC | + |
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Preference number: 1 (lower is better) Translates to: YVVCKQDRLGSSLRF*LSRATVVEYIAKKR Trigger: GCGTTTCTTAGCTATGTATTCAACTACCGTGGCTCTAGACAAGCAGAATCTCAGACTAGAACCAAGTCTGTCTTGTTTGCACACAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| 3UTR-3UTR CCA 90 bp | GTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTGCAGAGCTGTAAGTCACTGCTTAGATaGGCAGCCCAGACTGGCACA | + |
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Preference number: 2 (lower is better) Translates to: VHRRAHKLHLQNVSLQSCKSLLR*AAQTGT Trigger: TGTGCCAGTCTGGGCTGCCCATCTAAGCAGTGACTT...ACAGCTCTGCAGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| 3UTR-3UTR CCA 90 bp | GATTTTGGTAGCTTCCTTGAGGCGCTGTCCTGTGGCTCCAGTTTTTGCTTGTCTATTGTAAAGATGGCGTaGGATCGGGAGCTGTGCTCG | + |
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Preference number: 2 (lower is better) Translates to: DFGSFLEALSCGSSFCLSIVKMA*DRELCS Trigger: CGAGCACAGCTCCCGATCCCACGCCATCTTTACAAT...AGACAAGCAAAAACTGGAGCCACAGGACAGCGCCTCAAGGAAGCTACCAAAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132653.2 |
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| 3UTR-3UTR CCA 90 bp | GGCGCGGTTGGCATACCGCAAGGTGCTGATAGTTTCATCATAATTATAATCTGCGGAGACGGGTCAGTTTaGAGTTCCGATACGGCACGT | + |
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Preference number: 2 (lower is better) Translates to: GAVGIPQGADSFIIIIICGDGSV*SSDTAR Trigger: ACGTGCCGTATCGGAACTCCAAACTGACCCGTCTCC...GCAGATTATAATTATGATGAAACTATCAGCACCTTGCGGTATGCCAACCGCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132653.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCTGGCCCAATATTTGCACACATCATGGTTTTTGAGTTCCCTCCTAAGGAGTGGGATCGGGAGCTGTaGTCGTTCATATTAGTCGCA | + |
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Preference number: 2 (lower is better) Translates to: SAGPIFAHIMVFEFPPKEWDREL*SFILVA Trigger: TGCGACTAATATGAACGAGCACAGCTCCCGATCCCA...CTCCTTAGGAGGGAACTCAAAAACCATGATGTGTGCAAATATTGGGCCAGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132653.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCTGGCCCAATATTTGCACACATCATGGTTTTTGAGTTCCCTCCTAAGGAGTTTTGCTTGTCTTTCTaGCCCAGCCAGATCCACAAG | + |
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Preference number: 2 (lower is better) Translates to: SAGPIFAHIMVFEFPPKEFCLSF*PSQIHK Trigger: CTTGTGGATCTGGCTGGGTCAGAAAGACAAGCAAAA...CTCCTTAGGAGGGAACTCAAAAACCATGATGTGTGCAAATATTGGGCCAGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132653.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGTCAGATTTTATAGTTTTCCACAGGAGATCAATCAAGGTAGTCATTGCAATGGGCAGCCCAGACTaGCACAGGACACAGGACACA | + |
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Preference number: 2 (lower is better) Translates to: ELSDFIVFHRRSIKVVIAMGSPD*HRTQDT Trigger: TGTGTCCTGTGTCCTGTGCCAGTCTGGGCTGCCCAT...TGCAATGACTACCTTGATTGATCTCCTGTGGAAAACTATAAAATCTGACAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| 3UTR CAA 90 bp | GTTGTGTGCAAACAAGACAGACTTGGTTCTAGTCTGAGATTCTGCTaGTCTAGAGCCACGGTAGTTGAATACATAGCTAAGAAACGCACA | + |
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Preference number: 2 (lower is better) Translates to: VVCKQDRLGSSLRFC*SRATVVEYIAKKRT Trigger: TGTGCGTTTCTTAGCTATGTATTCAACTACCGTGGCTCTAGACAAGCAGAATCTCAGACTAGAACCAAGTCTGTCTTGTTTGCACACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| 3UTR TCA 72 bp | ACCCAGCCAGATCCACAAGGTGGAGCTTGCCCATCCTaGCGTGCATGTTCCCGTCCACGCCTTTCTCACTGC | + |
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Preference number: 3 (lower is better) Translates to: TQPDPQGGACPS*RACSRPRLSHC Trigger: GCAGTGAGAAAGGCGTGGACGGGAACATGCACGTCAGGATGGGCAAGCTCCACCTTGTGGATCTGGCTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132653.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCTCCTAAGGAGTCCTGCAGGAGACGGGTCAGTTTGGAGTTCCGATACGGCATCCACAAGGTGGAGCTaGCCCATCCTGACGTGCATG | + |
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Preference number: 3 (lower is better) Translates to: SLLRSPAGDGSVWSSDTASTRWS*PILTCM Trigger: CATGCACGTCAGGATGGGCAAGCTCCACCTTGTGGA...TGCCGTATCGGAACTCCAAACTGACCCGTCTCCTGCAGGACTCCTTAGGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132653.2 |
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| 3UTR CCA 72 bp | AGGTCAGGCAGGTACAGAATCAAGTCACTGCTTAGATaGGCAGCCCAGACTGGCACAGGACACAGGACACAG | + |
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Preference number: 3 (lower is better) Translates to: RSGRYRIKSLLR*AAQTGTGHRTQ Trigger: CTGTGTCCTGTGTCCTGTGCCAGTCTGGGCTGCCCATCTAAGCAGTGACTTGATTCTGTACCTGCCTGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| 3UTR TCA 72 bp | TACAACAACGGAACCCTTACTTCCTGCAGAGCAGTGTaGCAGACACAGTGCGCCATGCCCAACGACCATGAG | + |
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Preference number: 3 (lower is better) Translates to: YNNGTLTSCRAV*QTQCAMPNDHE Trigger: CTCATGGTCGTTGGGCATGGCGCACTGTGTCTGTCACACTGCTCTGCAGGAAGTAAGGGTTCCGTTGTTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| 3UTR TCA 72 bp | AGGAGACGGGTCAGTTTGGAGTTCCGATACGGCACGTaGGTGCTTTTTCCATCCACCAAGGCAGAAATAACG | + |
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Preference number: 3 (lower is better) Translates to: RRRVSLEFRYGT*VLFPSTKAEIT Trigger: CGTTATTTCTGCCTTGGTGGATGGAAAAAGCACTCACGTGCCGTATCGGAACTCCAAACTGACCCGTCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132653.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGCTGGCCCAATATTTGCACACATCATGGTTTTTGAGTTCCCTCCTAAGGAGATTTTGGTAGCTTCCTaGAGGCGCTGTCCTGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: SAGPIFAHIMVFEFPPKEILVAS*RRCPVA Trigger: AGCCACAGGACAGCGCCTCAAGGAAGCTACCAAAAT...CTCCTTAGGAGGGAACTCAAAAACCATGATGTGTGCAAATATTGGGCCAGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132653.2 |
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| 3UTR GCA 72 bp | CAGGACACAGGACACAGGACACAGGACAAGGTGATCTaGTATATGTTGTGTGCAAACAAGACAGACTTGGTT | + |
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Preference number: 3 (lower is better) Translates to: QDTGHRTQDKVI*YMLCANKTDLV Trigger: AACCAAGTCTGTCTTGTTTGCACACAACATATAGCAGATCACCTTGTCCTGTGTCCTGTGTCCTGTGTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| 3UTR-3UTR CAA 90 bp | TCTGCTGGCCCAATATTTGCACACATCATGGTTTTTGAGTTCCCTCCTAAGGAGAATGAAAGGTTGATTTaGGTAGCTTCCTTGAGGCGC | + |
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Preference number: 3 (lower is better) Translates to: SAGPIFAHIMVFEFPPKENERLI*VASLRR Trigger: GCGCCTCAAGGAAGCTACCAAAATCAACCTTTCATT...CTCCTTAGGAGGGAACTCAAAAACCATGATGTGTGCAAATATTGGGCCAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132653.2 |
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| 3UTR GCA 72 bp | CAGGACACAGGACAAGGTGATCTGCTATATGTTGTGTaGAAACAAGACAGACTTGGTTCTAGTCTGAGATTC | + |
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Preference number: 3 (lower is better) Translates to: QDTGQGDLLYVV*KQDRLGSSLRF Trigger: GAATCTCAGACTAGAACCAAGTCTGTCTTGTTTGCACACAACATATAGCAGATCACCTTGTCCTGTGTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| 3UTR GCA 72 bp | CAGGAGATCAATCAAGGTAGTCATTGCACACTTAGATaGAGTCAGGATGAGTGTAAAGTTGGACTGCATTTA | + |
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Preference number: 3 (lower is better) Translates to: QEINQGSHCTLR*SQDECKVGLHL Trigger: TAAATGCAGTCCAACTTTACACTCATCCTGACTGCATCTAAGTGTGCAATGACTACCTTGATTGATCTCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR CCA 90 bp | TGGAGGGTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTGCAGCTTGCTCCTCAGCCTTaGCCAGCAGGTCCACGCCGC | + |
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Preference number: 4 (lower is better) Translates to: WRVHRRAHKLHLQNVSLQLAPQP*PAGPRR Trigger: GCGGCGTGGACCTGCTGGCCAAGGCTGAGGAGCAAG...CTGCAGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCACCCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR CCA 90 bp | TTTCCGGAGCTGAGGACCGAACCCAGGGCCTTGGGCTTGCTAGGCAAGCACTTTTCTTCGCCCCATCTTTaGCCTTGCTTTCCCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: FPELRTEPRALGLLGKHFSSPHL*PCFPLG Trigger: TCCAAGGGGAAAGCAAGGCCAAAGATGGGGCGAAGA...AAAGTGCTTGCCTAGCAAGCCCAAGGCCCTGGGTTCGGTCCTCAGCTCCGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| 3UTR CAA 72 bp | TTTCCGGAGCTGAGGACCGAACCCAGGGCCTTGGGCTaGCTAGGCAAGCACTTTACCACTGAGCTAAATCCC | + |
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Preference number: 4 (lower is better) Translates to: FPELRTEPRALG*LGKHFTTELNP Trigger: GGGATTTAGCTCAGTGGTAAAGTGCTTGCCTAGCAAGCCCAAGGCCCTGGGTTCGGTCCTCAGCTCCGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR TCA 90 bp | GTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGACGGAGCTCCCGGCTaGGCTGCCGGATGTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VSLHALQLPLCEPYSCPRDGAPG*AAGCSP Trigger: TGGAGAACATCCGGCAGCTCAGCCGGGAGCTCCGTC...ACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR GCA 90 bp | GAAGTGGAGGGTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTTCCAGAAGCTTCTCTTaGTCCTCAGCCTTGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EVEGAQASTQTASSECKPSRSFS*SSALAS Trigger: GCTGGCCAAGGCTGAGGAGCAAGAGAAGCTTCTGGA...AGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCACCCTCCACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR CCA 90 bp | GTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTCTTGCTCCTCAGCCTTaGCCAGCAGGTCCACGCCGC | + |
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Preference number: 4 (lower is better) Translates to: VSLHALQLPLCEPYSCPRLAPQP*PAGPRR Trigger: GCGGCGTGGACCTGCTGGCCAAGGCTGAGGAGCAAG...ACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR TCA 90 bp | TCCCTCCTAAGGAGTCCTGCAGGAGACGGGTCAGTTTGGAGTTCCGATACGGCATCTAACCTCTGGGTCTaGTCTTTACCCAAAAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SLLRSPAGDGSVWSSDTASNLWV*SLPKRS Trigger: AGACCTTTTGGGTAAAGATCAGACCCAGAGGTTAGA...TGCCGTATCGGAACTCCAAACTGACCCGTCTCCTGCAGGACTCCTTAGGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132653.2 |
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| CDS-3UTR GCA 90 bp | TGGAGGGTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTGCAGCTTGGTCTTTCCTTGTaGCTCCTCTTGCAGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: WRVHRRAHKLHLQNVSLQLGLSL*LLLQTG Trigger: ACCAGTCTGCAAGAGGAGGCACAAGGAAAGACCAAG...CTGCAGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCACCCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR GCA 90 bp | AAGTGGAGGGTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTGTACGGTCTCAGGCTTTaGAGAACGCTTTCTTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: KWRVHRRAHKLHLQNVSLYGLRL*RTLSSP Trigger: GGGCGAAGAAAGCGTTCTGCAAAGCCTGAGACCGTA...CAGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCACCCTCCACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR CCA 90 bp | GTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTGCAGAGCTGTATTGTAAAGATGGCGTaGGATCGGGAGCTGTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: VHRRAHKLHLQNVSLQSCIVKMA*DRELCS Trigger: CGAGCACAGCTCCCGATCCCACGCCATCTTTACAAT...ACAGCTCTGCAGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR CCA 90 bp | GAAGTGGAGGGTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTCCTCCAGCTCCATGTTaGACTCCTCCAGAAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: EVEGAQASTQTASSECKPPPAPC*TPPEAS Trigger: AGAAGCTTCTGGAGGAGTCCAACATGGAGCTGGAGG...AGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCACCCTCCACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR TCA 90 bp | AAGTGGAGGGTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTGTTTTGCTTGTCTTTCTaGCCCAGCCAGATCCACAAG | + |
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Preference number: 4 (lower is better) Translates to: KWRVHRRAHKLHLQNVSLFCLSF*PSQIHK Trigger: CTTGTGGATCTGGCTGGGTCAGAAAGACAAGCAAAA...CAGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCACCCTCCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR GCA 90 bp | GTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTGCAGAGCTGTATGTCCAAGCGTTCTTaGTCCTTTTCCTCCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VHRRAHKLHLQNVSLQSCMSKRS*SFSSSS Trigger: AGAGCTGGAGGAAAAGGAGCAAGAACGCTTGGACAT...ACAGCTCTGCAGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR GCA 90 bp | GTGGAGGGTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTGCACCTTGTGCCTCCTCTTaGAGACTGGTATATTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: VEGAQASTQTASSECKPAPCASS*RLVYFS Trigger: GGAAAAATATACCAGTCTGCAAGAGGAGGCACAAGG...TGCAGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCACCCTCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR TCA 90 bp | GTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTTCAATGATGAGCATCTaGAGACGGAGCTCCCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VSLHALQLPLCEPYSCPRSMMSI*RRSSRL Trigger: CAGCCGGGAGCTCCGTCTTCAGATGCTCATCATTGA...ACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR GCA 90 bp | TATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTAGCTCCCGGCTGAGCTaGCGGATGTTCTCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: YFQSLSMLYSFHYVNHTVSSRLS*RMFSRR Trigger: CCTCCTGGAGAACATCCGGCAGCTCAGCCGGGAGCT...AACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR CCA 90 bp | GTGGAGGGTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTGCACTTCTTGTCAGGGACTaGAGTTTGTTTCCTCATGTT | + |
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Preference number: 4 (lower is better) Translates to: VEGAQASTQTASSECKPALLVRD*SLFPHV Trigger: AACATGAGGAAACAAACTCCAGTCCCTGACAAGAAG...TGCAGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCACCCTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR CCA 90 bp | AAGTGGAGGGTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTGAAGGTCGACTTCAAATaGGTCTCTCTCCTTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: KWRVHRRAHKLHLQNVSLKVDFK*VSLLLV Trigger: GACAAGAAGGAGAGAGACCCATTTGAAGTCGACCTT...CAGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCACCCTCCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR GCA 90 bp | CGTGTCTTAATTAAGGAGTTCTCTCCAGGCATGGGACAGCACTCTTTTTATTATCCCCATCTTTGGCCTTaGTTTCCCCTTGGAGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: RVLIKEFSPGMGQHSFYYPHLWP*FPLGGP Trigger: CGGACCTCCAAGGGGAAAGCAAGGCCAAAGATGGGG...ATAATAAAAAGAGTGCTGTCCCATGCCTGGAGAGAACTCCTTAATTAAGACACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR CCA 90 bp | GTGGAGGGTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTGCACTTCCATGTCAAGTTTaGTTTCCAGTGCTTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VEGAQASTQTASSECKPALPCQV*FPVLFS Trigger: AGAGAAAAGCACTGGAAACCAAACTTGACATGGAAG...TGCAGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCACCCTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR CCA 90 bp | AAGTGGAGGGTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTGCCTCCTCTTGCAGACTaGTATATTTTTCCTCGATGT | + |
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Preference number: 4 (lower is better) Translates to: KWRVHRRAHKLHLQNVSLPPLAD*YIFPRC Trigger: ACATCGAGGAAAAATATACCAGTCTGCAAGAGGAGG...CAGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCACCCTCCACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR TCA 90 bp | CGTGTCTTAATTAAGGAGTTCTCTCCAGGCATGGGACAGCACTCTTTTTATTATGAACGCCTTCCATGGTaGAAGTCTTGCCTGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RVLIKEFSPGMGQHSFYYERLPW*KSCLSQ Trigger: CTGGGACAGGCAAGACTTTCACCATGGAAGGCGTTC...ATAATAAAAAGAGTGCTGTCCCATGCCTGGAGAGAACTCCTTAATTAAGACACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR TCA 90 bp | CGTGTCTTAATTAAGGAGTTCTCTCCAGGCATGGGACAGCACTCTTTTTATTATCCTTCGATCTCCCTCTaGTGCTCCTGCTGGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: RVLIKEFSPGMGQHSFYYPSISL*CSCWRS Trigger: TGATCTCCAGCAGGAGCATCAGAGGGAGATCGAAGG...ATAATAAAAAGAGTGCTGTCCCATGCCTGGAGAGAACTCCTTAATTAAGACACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR GCA 90 bp | TCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGCTTGGTCTTTCCTTGTaGCTCCTCTTGCAGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: SLSMLYSFHYVNHTVVLVLGLSL*LLLQTG Trigger: ACCAGTCTGCAAGAGGAGGCACAAGGAAAGACCAAG...CACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR GCA 90 bp | GAAAATTGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCCCCATCTTTGGCCTTaGTTTCCCCTTGGAGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: ENCYFQSLSMLYSFHYVNPHLWP*FPLGGP Trigger: CGGACCTCCAAGGGGAAAGCAAGGCCAAAGATGGGG...GTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATAGCAATTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR CCA 90 bp | TGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGGAGACGGGTCAGTTTaGAGTTCCGATACGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: CYFQSLSMLYSFHYVNHTGDGSV*SSDTAR Trigger: ACGTGCCGTATCGGAACTCCAAACTGACCCGTCTCC...TGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGGAGCAGAGCATCCTTTaGGTCCTCATTGATTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSMLYSFHYVNHTVVLVEQSIL*VLIDSR Trigger: GCGAGAATCAATGAGGACCCAAAGGATGCTCTGCTC...CACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR TCA 90 bp | CGTGTCTTAATTAAGGAGTTCTCTCCAGGCATGGGACAGCACTCTTTTTATTATACTGATGTCAGAGCCTaGCACTTCTTCCCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVLIKEFSPGMGQHSFYYTDVRA*HFFPFL Trigger: GAGGAAGGGGAAGAAGTGTCAGGCTCTGACATCAGT...ATAATAAAAAGAGTGCTGTCCCATGCCTGGAGAGAACTCCTTAATTAAGACACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR TCA 90 bp | TTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGTCTTAATTAAGGAGCCACGCCGCCGACAATaGCCTTCTTTTCCAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQLPLCEPYSCPRVLIKEPRRRQ*PSFPKQ Trigger: CTGCTTTGGAAAAGAAGGTCATTGTCGGCGGCGTGG...CTCCTTAATTAAGACACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCAACTTCATCAGAGACTaGCGCAGACTCTCCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QSLSMLYSFHYVNHTVVLNFIRD*RRLSSV Trigger: TACAGAGGAGAGTCTGCGTCAGTCTCTGATGAAGTT...GAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGGTCGCCCTCTGCTTTTaGGATGTGACCAAATATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSMLYSFHYVNHTVVLVVALCF*DVTKYV Trigger: CACATATTTGGTCACATCGCAAAAGCAGAGGGCGAC...CACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR GCA 90 bp | TATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTCCTCCTAAGGAGTCCTaGAGGAGACGGGTCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YFQSLSMLYSFHYVNHTVPPKES*RRRVSL Trigger: CAAACTGACCCGTCTCCTGCAGGACTCCTTAGGAGG...AACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR GCA 90 bp | CAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCATGTCCAAGCGTTCTTaGTCCTTTTCCTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSLSMLYSFHYVNHTVVLMSKRS*SFSSSS Trigger: AGAGCTGGAGGAAAAGGAGCAAGAACGCTTGGACAT...GAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGTCTAACCTCTGGGTCTaGTCTTTACCCAAAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSMLYSFHYVNHTVVLVSNLWV*SLPKRS Trigger: AGACCTTTTGGGTAAAGATCAGACCCAGAGGTTAGA...CACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR GCA 90 bp | TGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACATGGGATCGGGAGCTGTaGTCGTTCATATTAGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: CYFQSLSMLYSFHYVNHTWDREL*SFILVA Trigger: TGCGACTAATATGAACGAGCACAGCTCCCGATCCCA...TGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR GCA 90 bp | GTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTCCTTGTGCCTCCTCTTaGAGACTGGTATATTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSLHALQLPLCEPYSCPRPCASS*RLVYFS Trigger: GGAAAAATATACCAGTCTGCAAGAGGAGGCACAAGG...ACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| CDS-3UTR GCA 90 bp | AAATTGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACGGTCTCAGGCTTTaGAGAACGCTTTCTTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLLFPVSLHALQLPLCEPYGLRL*RTLSSP Trigger: GGGCGAAGAAAGCGTTCTGCAAAGCCTGAGACCGTA...TGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATAGCAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| CDS-3UTR CCA 90 bp | TTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGTCTTAATTAAGGAGTCTTCGCCCCATCTTTaGCCTTGCTTTCCCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQLPLCEPYSCPRVLIKESSPHL*PCFPLG Trigger: TCCAAGGGGAAAGCAAGGCCAAAGATGGGGCGAAGA...CTCCTTAATTAAGACACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| CDS-3UTR TCA 90 bp | CTAAAAGATATTAGGAAAATTGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTCCACGCCGCCGACAATaGCCTTCTTTTCCAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKDIRKIAISSLSPCFTAPRRRQ*PSFPKQ Trigger: CTGCTTTGGAAAAGAAGGTCATTGTCGGCGGCGTGG...AGCTGTAAAGCATGGAGAGAGACTGGAAATAGCAATTTTCCTAATATCTTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| CDS-3UTR TCA 90 bp | GTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTTTCAATCATTTCCTCTaGCTTTGCAGCCATCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSLHALQLPLCEPYSCPRFNHFL*LCSHQH Trigger: ATGCTGATGGCTGCAAAGTCAGAGGAAATGATTGAA...ACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130037.2 |
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| CDS-3UTR CCA 90 bp | TTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGTCTTAATTAAGGAGGAGGAATCGGTCTTATaGACGGTGATAGTTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQLPLCEPYSCPRVLIKEEESVL*TVIVPL Trigger: GAGGGGAACTATCACCGTCCATAAGACCGATTCCTC...CTCCTTAATTAAGACACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR TCA 90 bp | AGGAGTTCTCTCCAGGCATGGGACAGCACTCTTTTTATTATTTTAACTTTAATTTTCCGATACGGCACGTaGGTGCTTTTTCCATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RSSLQAWDSTLFIILTLIFRYGT*VLFPST Trigger: GGTGGATGGAAAAAGCACTCACGTGCCGTATCGGAA...AATTAAAGTTAAAATAATAAAAAGAGTGCTGTCCCATGCCTGGAGAGAACTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGAAGTTTGGTTTCCAGTaGTTTTCTCTCCTCGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLSMLYSFHYVNHTVVLVKFGFQ*FSLLVN Trigger: ATTGACGAGGAGAGAAAAGCACTGGAAACCAAACTT...CACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR CCA 90 bp | CTAAAAGATATTAGGAAAATTGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTCCTCCAGCTCCATGTTaGACTCCTCCAGAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKDIRKIAISSLSPCFTAPPAPC*TPPEAS Trigger: AGAAGCTTCTGGAGGAGTCCAACATGGAGCTGGAGG...AGCTGTAAAGCATGGAGAGAGACTGGAAATAGCAATTTTCCTAATATCTTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| 3UTR CAA 72 bp | AAACAAGACAGACTTGGTTCTAGTCTGAGATTCTGCTaGTCTAGAGCCACGGTAGTTGAATACATAGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQDRLGSSLRFC*SRATVVEYIAK Trigger: CTTAGCTATGTATTCAACTACCGTGGCTCTAGACAAGCAGAATCTCAGACTAGAACCAAGTCTGTCTTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGATGCTGATAAGTCTTTaGTATATACTCCCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSMLYSFHYVNHTVVLVMLISL*YILPHQ Trigger: CTGATGTGGGAGTATATATCAAAGACTTATCAGCAT...CACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR CCA 90 bp | CGTGTCTTAATTAAGGAGTTCTCTCCAGGCATGGGACAGCACTCTTTTTATTATCTTCTTGTCAGGGACTaGAGTTTGTTTCCTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RVLIKEFSPGMGQHSFYYLLVRD*SLFPHV Trigger: AACATGAGGAAACAAACTCCAGTCCCTGACAAGAAG...ATAATAAAAAGAGTGCTGTCCCATGCCTGGAGAGAACTCCTTAATTAAGACACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR CCA 90 bp | TATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTAAGGTCGACTTCAAATaGGTCTCTCTCCTTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YFQSLSMLYSFHYVNHTVKVDFK*VSLLLV Trigger: GACAAGAAGGAGAGAGACCCATTTGAAGTCGACCTT...AACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR TCA 90 bp | TTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGTCTTAATTAAGGAGCTGTCTATAGCACATTaGCTTCTCTCTCTCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQLPLCEPYSCPRVLIKELSIAH*LLSLIE Trigger: CTCAATGAGAGAGAGAAGTCAATGTGCTATAGACAG...CTCCTTAATTAAGACACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR GCA 90 bp | ATGAGCTGCGGCGCACTTACATGTTACAGACACTTAAAGAGTCTAAAAGATATTGCCACACATTTTAGCTaGCATTCTCCTATGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MSCGALTCYRHLKSLKDIATHFS*HSPMSS Trigger: TGAAGACATAGGAGAATGGCAGCTAAAATGTGTGGC...AATATCTTTTAGACTCTTTAAGTGTCTGTAACATGTAAGTGCGCCGCAGCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR CCA 90 bp | AAATTGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCACCTCCTCTTGCAGACTaGTATATTTTTCCTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: KLLFPVSLHALQLPLCEPPPLAD*YIFPRC Trigger: ACATCGAGGAAAAATATACCAGTCTGCAAGAGGAGG...TGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATAGCAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR CCA 90 bp | GAAAATTGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACGAAAGTAAATGTCTTTaGAGGTTCGTTGGAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: ENCYFQSLSMLYSFHYVNESKCL*RFVGGI Trigger: GATTCCTCCAACGAACCTCCAAAGACATTTACTTTC...GTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATAGCAATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR TCA 90 bp | CATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGTCTTAATTATATATCTCCAAGTATaGCACTCGAACCAAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: HALQLPLCEPYSCPRVLIIYLQV*HSNQKP Trigger: AGGTTTTTGGTTCGAGTGTCATACTTGGAGATATAT...AATTAAGACACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR CCA 90 bp | TTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGTCTTAATTAAGGAGCTTTCTTTAATTTCTTaGTCTTTCCTTGTGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQLPLCEPYSCPRVLIKELSLIS*SFLVPP Trigger: AGGAGGCACAAGGAAAGACCAAGAAATTAAAGAAAG...CTCCTTAATTAAGACACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| CDS TCA 90 bp | CGGCTGAGCTGCCGGATGTTCTCCAGGAGGCCTTCGATCTCCCTCTaGTGCTCCTGCTGGAGATCAGCCATCTCTGACTTTGCAGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: RLSCRMFSRRPSISL*CSCWRSAISDFAAI Trigger: GATGGCTGCAAAGTCAGAGATGGCTGATCTCCAGCAGGAGCATCAGAGGGAGATCGAAGGCCTCCTGGAGAACATCCGGCAGCTCAGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000173744.8 |
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| CDS-3UTR CAA 90 bp | TGGAGGGTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTGCAGGCCCCATCTTTGGCCTaGCTTTCCCCTTGGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WRVHRRAHKLHLQNVSLQAPSLA*LSPWRS Trigger: GGACCTCCAAGGGGAAAGCAAGGCCAAAGATGGGGC...CTGCAGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCACCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR CAA 90 bp | GAAGTGGAGGGTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTGACTTCTCTCTCTCATaGAGAGGCCGGCACCTAACC | + |
|
Preference number: 5 (lower is better) Translates to: EVEGAQASTQTASSECKPDFSLS*RGRHLT Trigger: GGTTAGGTGCCGGCCTCTCAATGAGAGAGAGAAGTC...AGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCACCCTCCACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGTCTTGCTCCTCAGCCTaGGCCAGCAGGTCCACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SLSMLYSFHYVNHTVVLVSCSSA*ASRSTP Trigger: CGGCGTGGACCTGCTGGCCAAGGCTGAGGAGCAAGA...CACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| CDS-3UTR CAA 90 bp | GTGGAGGGTGCACAGGCGAGCACACAAACTGCATCTTCAGAATGTAAGCCTGCATTACGGTCTCAGGCTTaGCAGAACGCTTTCTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VEGAQASTQTASSECKPALRSQA*QNAFFA Trigger: GGCGAAGAAAGCGTTCTGCAAAGCCTGAGACCGTAA...TGCAGGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCACCCTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS TCA 90 bp | AGTTCCCCTCATTTCATCCACGCTGACGGCCTGTCTATAGCACATTaGCTTCTCTCTCTCATTGAGAGGCCGGCACCTAACCACCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSPHFIHADGLSIAH*LLSLIERPAPNHHL Trigger: AAGGTGGTGGTTAGGTGCCGGCCTCTCAATGAGAGAGAGAAGTCAATGTGCTATAGACAGGCCGTCAGCGTGGATGAAATGAGGGGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000132496.3 ENSMUST00000173744.8 |
||
| CDS TCA 90 bp | TTTTACCTGCTTGGTGAGGCAAGAACTCATCCAGGGGCTTCTCTATaGCAGAACATGTGGAGTCTGAGCTACTGCTGCTGCTACTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FYLLGEARTHPGASL*QNMWSLSYCCCYCP Trigger: GGGGCAGTAGCAGCAGCAGTAGCTCAGACTCCACATGTTCTGTCATAGAGAAGCCCCTGGATGAGTTCTTGCCTCACCAAGCAGGTAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118353.9 |
||
| CDS GCA 90 bp | TCCTCTTGCAGACTGGTATATTTTTCCTCGATGTCCAAGCGTTCTTaGTCCTTTTCCTCCAGCTCTTTCCGAAGCTGCTCAGCTCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSCRLVYFSSMSKRS*SFSSSSFRSCSARL Trigger: GAGACGAGCTGAGCAGCTTCGGAAAGAGCTGGAGGAAAAGGAGCAAGAACGCTTGGACATCGAGGAAAAATATACCAGTCTGCAAGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000130037.2 ENSMUST00000173744.8 |
||
| CDS CCA 90 bp | TCGAAAGTAAATGTCTTTGGAGGTTCGTTGGAGGAATCGGTCTTATaGACGGTGATAGTTCCCCTCATTTCATCCACGCTGACGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SKVNVFGGSLEESVL*TVIVPLISSTLTAC Trigger: ACAGGCCGTCAGCGTGGATGAAATGAGGGGAACTATCACCGTCCATAAGACCGATTCCTCCAACGAACCTCCAAAGACATTTACTTTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000132496.3 ENSMUST00000173744.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGTCCATGGTGAAAGTCTaGCCTGTCCCAGTCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSMLYSFHYVNHTVVLVSMVKV*PVPVCP Trigger: TGGACAGACTGGGACAGGCAAGACTTTCACCATGGA...CACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR CAA 90 bp | GTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTATTTTGGTAGCTTCCTaGAGGCGCTGTCCTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VSLHALQLPLCEPYSCPRILVAS*RRCPVA Trigger: AGCCACAGGACAGCGCCTCAAGGAAGCTACCAAAAT...ACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR CAA 90 bp | AGGAGTTCTCTCCAGGCATGGGACAGCACTCTTTTTATTATTTTAACTTTAATTTCTTGCTCCTCAGCCTaGGCCAGCAGGTCCACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RSSLQAWDSTLFIILTLISCSSA*ASRSTP Trigger: CGGCGTGGACCTGCTGGCCAAGGCTGAGGAGCAAGA...AATTAAAGTTAAAATAATAAAAAGAGTGCTGTCCCATGCCTGGAGAGAACTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| CDS-3UTR CAA 90 bp | GTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGGGTCTCTCTCCTTCTaGTCAGGGACTGGAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VSLHALQLPLCEPYSCPRGSLSF*SGTGVC Trigger: ACAAACTCCAGTCCCTGACAAGAAGGAGAGAGACCC...ACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| CDS-3UTR CAA 90 bp | AAATTGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCAGGCCTTGCTTTCCCCTaGGAGGTCCGTGGCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KLLFPVSLHALQLPLCEPGLAFP*EVRGLS Trigger: AGAAAGGCCACGGACCTCCAAGGGGAAAGCAAGGCC...TGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATAGCAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| CDS-3UTR CAA 90 bp | CATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGTCTTAATTGCCCCATCTTTGGCCTaGCTTTCCCCTTGGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HALQLPLCEPYSCPRVLIAPSLA*LSPWRS Trigger: GGACCTCCAAGGGGAAAGCAAGGCCAAAGATGGGGC...AATTAAGACACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| CDS-3UTR CAA 90 bp | CATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGTCTTAATTTCCACAAGGTGGAGCTaGCCCATCCTGACGTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: HALQLPLCEPYSCPRVLISTRWS*PILTCM Trigger: CATGCACGTCAGGATGGGCAAGCTCCACCTTGTGGA...AATTAAGACACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS CCA 90 bp | GGAAAGGTCGACTTCAAATGGGTCTCTCTCCTTCTTGTCAGGGACTaGAGTTTGTTTCCTCATGTTATTTCCTGTGTAGGCCACACATTT | + |
|
Preference number: 5 (lower is better) Translates to: GKVDFKWVSLLLVRD*SLFPHVISCVGHTF Trigger: AAATGTGTGGCCTACACAGGAAATAACATGAGGAAACAAACTCCAGTCCCTGACAAGAAGGAGAGAGACCCATTTGAAGTCGACCTTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000130037.2 ENSMUST00000173744.8 |
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| CDS-3UTR CAA 90 bp | GTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTCAAAGACTGATGCTCTaGTTGGGCTTTCAGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSLHALQLPLCEPYSCPRQRLML*LGFQKV Trigger: GACCTTCTGAAAGCCCAACAAGAGCATCAGTCTTTG...ACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR CAA 90 bp | GAAAATTGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACTCCTCCAGCTCCATGTaGGACTCCTCCAGAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ENCYFQSLSMLYSFHYVNSSSSM*DSSRSF Trigger: GAAGCTTCTGGAGGAGTCCAACATGGAGCTGGAGGA...GTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATAGCAATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR CAA 90 bp | AGGAGTTCTCTCCAGGCATGGGACAGCACTCTTTTTATTATTTTAACTTTAATTGGCCTTGCTTTCCCCTaGGAGGTCCGTGGCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RSSLQAWDSTLFIILTLIGLAFP*EVRGLS Trigger: AGAAAGGCCACGGACCTCCAAGGGGAAAGCAAGGCC...AATTAAAGTTAAAATAATAAAAAGAGTGCTGTCCCATGCCTGGAGAGAACTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR CAA 90 bp | CATGCTTTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGTCTTAATTTTCTTCGCCCCATCTTaGGCCTTGCTTTCCCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HALQLPLCEPYSCPRVLIFFAPS*ALLSPW Trigger: CCAAGGGGAAAGCAAGGCCAAAGATGGGGCGAAGAA...AATTAAGACACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAAAGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR CAA 90 bp | TGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACATTACGGTCTCAGGCTTaGCAGAACGCTTTCTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: CYFQSLSMLYSFHYVNHTLRSQA*QNAFFA Trigger: GGCGAAGAAAGCGTTCTGCAAAGCCTGAGACCGTAA...TGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR CAA 90 bp | GAGCTGTCAGATTTTATAGTTTTCCACAGGAGATCAATCAAGGTAGTCATTGCAGATGTCCAAGCGTTCTaGCTCCTTTTCCTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ELSDFIVFHRRSIKVVIADVQAF*LLFLQL Trigger: GAGCTGGAGGAAAAGGAGCAAGAACGCTTGGACATC...TGCAATGACTACCTTGATTGATCTCCTGTGGAAAACTATAAAATCTGACAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR CAA 90 bp | ATGAGCTGCGGCGCACTTACATGTTACAGACACTTAAAGAGTCTAAAAGATATTGGGTCTCTCTCCTTCTaGTCAGGGACTGGAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: MSCGALTCYRHLKSLKDIGSLSF*SGTGVC Trigger: ACAAACTCCAGTCCCTGACAAGAAGGAGAGAGACCC...AATATCTTTTAGACTCTTTAAGTGTCTGTAACATGTAAGTGCGCCGCAGCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR CAA 90 bp | ATGAGCTGCGGCGCACTTACATGTTACAGACACTTAAAGAGTCTAAAAGATATTGTCTTTGGAGGTTCGTaGGAGGAATCGGTCTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: MSCGALTCYRHLKSLKDIVFGGS*EESVLW Trigger: CCATAAGACCGATTCCTCCAACGAACCTCCAAAGAC...AATATCTTTTAGACTCTTTAAGTGTCTGTAACATGTAAGTGCGCCGCAGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
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| CDS-3UTR CAA 90 bp | CTAAAAGATATTAGGAAAATTGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCTCCAGCTCCATGTaGGACTCCTCCAGAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKDIRKIAISSLSPCFTASSSSM*DSSRSF Trigger: GAAGCTTCTGGAGGAGTCCAACATGGAGCTGGAGGA...AGCTGTAAAGCATGGAGAGAGACTGGAAATAGCAATTTTCCTAATATCTTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR CAA 90 bp | AGGAGTTCTCTCCAGGCATGGGACAGCACTCTTTTTATTATTTTAACTTTAATTTTCTTCGCCCCATCTTaGGCCTTGCTTTCCCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSSLQAWDSTLFIILTLIFFAPS*ALLSPW Trigger: CCAAGGGGAAAGCAAGGCCAAAGATGGGGCGAAGAA...AATTAAAGTTAAAATAATAAAAAGAGTGCTGTCCCATGCCTGGAGAGAACTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR CAA 90 bp | ATGAGCTGCGGCGCACTTACATGTTACAGACACTTAAAGAGTCTAAAAGATATTTCATTTCCTCTGACTTaGCAGCCATCAGCATGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: MSCGALTCYRHLKSLKDISFPLT*QPSAWS Trigger: GGACCATGCTGATGGCTGCAAAGTCAGAGGAAATGA...AATATCTTTTAGACTCTTTAAGTGTCTGTAACATGTAAGTGCGCCGCAGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130037.2 |
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| CDS-3UTR CAA 90 bp | CGTGTCTTAATTAAGGAGTTCTCTCCAGGCATGGGACAGCACTCTTTTTATTATAATGAAAGGTTGATTTaGGTAGCTTCCTTGAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RVLIKEFSPGMGQHSFYYNERLI*VASLRR Trigger: GCGCCTCAAGGAAGCTACCAAAATCAACCTTTCATT...ATAATAAAAAGAGTGCTGTCCCATGCCTGGAGAGAACTCCTTAATTAAGACACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR CAA 90 bp | AAATTGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCAAGACTGATGCTCTTGTaGGGCTTTCAGAAGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KLLFPVSLHALQLPLCEPRLMLL*GFQKVL Trigger: AAGGACCTTCTGAAAGCCCAACAAGAGCATCAGTCT...TGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATAGCAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR CAA 90 bp | AGGAGTTCTCTCCAGGCATGGGACAGCACTCTTTTTATTATTTTAACTTTAATTGATGTCCAAGCGTTCTaGCTCCTTTTCCTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSSLQAWDSTLFIILTLIDVQAF*LLFLQL Trigger: GAGCTGGAGGAAAAGGAGCAAGAACGCTTGGACATC...AATTAAAGTTAAAATAATAAAAAGAGTGCTGTCCCATGCCTGGAGAGAACTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| CDS-3UTR CAA 90 bp | AAATTGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATTTCTTGGTCTTTCCTaGTGCCTCCTCTTGCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: KLLFPVSLHALQLPLCEPFLGLS*CLLLQT Trigger: AGTCTGCAAGAGGAGGCACAAGGAAAGACCAAGAAA...TGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATAGCAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGCTGCGGCGCACTTACATGTTACAGACACTTAAAGAGTCTAAAAGATATTTTTCTTGGTCTTTCCTaGTGCCTCCTCTTGCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: MSCGALTCYRHLKSLKDIFLGLS*CLLLQT Trigger: AGTCTGCAAGAGGAGGCACAAGGAAAGACCAAGAAA...AATATCTTTTAGACTCTTTAAGTGTCTGTAACATGTAAGTGCGCCGCAGCTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS CCA 90 bp | TTGTTTACTTTCTGGTCCAAAAACAGTATCGAAAGTAAATGTCTTTaGAGGTTCGTTGGAGGAATCGGTCTTATGGACGGTGATAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFTFWSKNSIESKCL*RFVGGIGLMDGDSS Trigger: GGAACTATCACCGTCCATAAGACCGATTCCTCCAACGAACCTCCAAAGACATTTACTTTCGATACTGTTTTTGGACCAGAAAGTAAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000132496.3 ENSMUST00000173744.8 |
||
| CDS-3UTR CAA 90 bp | TTACAGCTTCCATTATGTGAACCATACAGTTGTCCTCGTGTCTTAATTAAGGAGCTGCTGGCCCAATATTaGCACACATCATGGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LQLPLCEPYSCPRVLIKELLAQY*HTSWFL Trigger: CAAAAACCATGATGTGTGCAAATATTGGGCCAGCAG...CTCCTTAATTAAGACACGAGGACAACTGTATGGTTCACATAATGGAAGCTGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR CAA 90 bp | TATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTTCCTTGTGCCTCCTCTaGCAGACTGGTATATTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YFQSLSMLYSFHYVNHTVSLCLL*QTGIFF Trigger: GAAAAATATACCAGTCTGCAAGAGGAGGCACAAGGA...AACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR CAA 90 bp | GAAAATTGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACTCCTTGTGCCTCCTCTaGCAGACTGGTATATTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ENCYFQSLSMLYSFHYVNSLCLL*QTGIFF Trigger: GAAAAATATACCAGTCTGCAAGAGGAGGCACAAGGA...GTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATAGCAATTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120613.9 ENSMUST00000130037.2 |
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| CDS-3UTR CAA 90 bp | CTAAAAGATATTAGGAAAATTGCTATTTCCAGTCTCTCTCCATGCTTTACAGCTTGTCGCCCTCTGCTTTaGCGATGTGACCAAATATGT | + |
|
Preference number: 5 (lower is better) Translates to: LKDIRKIAISSLSPCFTACRPLL*RCDQIC Trigger: ACATATTTGGTCACATCGCAAAAGCAGAGGGCGACA...AGCTGTAAAGCATGGAGAGAGACTGGAAATAGCAATTTTCCTAATATCTTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR CAA 90 bp | GAGCTGTCAGATTTTATAGTTTTCCACAGGAGATCAATCAAGGTAGTCATTGCATCTTCCATGTCAAGTTaGGTTTCCAGTGCTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ELSDFIVFHRRSIKVVIASSMSS*VSSAFL Trigger: GAGAAAAGCACTGGAAACCAAACTTGACATGGAAGA...TGCAATGACTACCTTGATTGATCTCCTGTGGAAAACTATAAAATCTGACAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS-3UTR CAA 90 bp | TATTTCCAGTCTCTCTCCATGCTTTACAGCTTCCATTATGTGAACCATACAGTTTCATTGATTCTCGCTTaGTTTTTAATGTTCTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: YFQSLSMLYSFHYVNHTVSLILA*FLMFLA Trigger: CGCCAAGAACATTAAAAACAAAGCGAGAATCAATGA...AACTGTATGGTTCACATAATGGAAGCTGTAAAGCATGGAGAGAGACTGGAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120613.9 |
||
| CDS CCA 72 bp | CTCAGGCTTTGCAGAACGCTTTCTTCGCCCCATCTTTaGCCTTGCTTTCCCCTTGGAGGTCCGTGGCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRLCRTLSSPHL*PCFPLGGPWPF Trigger: GAAAGGCCACGGACCTCCAAGGGGAAAGCAAGGCCAAAGATGGGGCGAAGAAAGCGTTCTGCAAAGCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000130037.2 ENSMUST00000173744.8 |
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| CDS TCA 72 bp | TGCCGGATGTTCTCCAGGAGGCCTTCGATCTCCCTCTaGTGCTCCTGCTGGAGATCAGCCATCTCTGACTTT | + |
|
Preference number: 6 (lower is better) Translates to: CRMFSRRPSISL*CSCWRSAISDF Trigger: AAAGTCAGAGATGGCTGATCTCCAGCAGGAGCATCAGAGGGAGATCGAAGGCCTCCTGGAGAACATCCGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000173744.8 |
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| CDS CAA 72 bp | TCTCAGGCTTTGCAGAACGCTTTCTTCGCCCCATCTTaGGCCTTGCTTTCCCCTTGGAGGTCCGTGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SQALQNAFFAPS*ALLSPWRSVAF Trigger: AAAGGCCACGGACCTCCAAGGGGAAAGCAAGGCCAAAGATGGGGCGAAGAAAGCGTTCTGCAAAGCCTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000130037.2 ENSMUST00000173744.8 |
||
| CDS CAA 72 bp | CGCTTTCTTCGCCCCATCTTTGGCCTTGCTTTCCCCTaGGAGGTCCGTGGCCTTTCTAACTTCATCAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RFLRPIFGLAFP*EVRGLSNFIRD Trigger: GTCTCTGATGAAGTTAGAAAGGCCACGGACCTCCAAGGGGAAAGCAAGGCCAAAGATGGGGCGAAGAAAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000130037.2 ENSMUST00000173744.8 |
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| CDS CAA 72 bp | GCTTTGCAGAACGCTTTCTTCGCCCCATCTTTGGCCTaGCTTTCCCCTTGGAGGTCCGTGGCCTTTCTAACT | + |
|
Preference number: 6 (lower is better) Translates to: ALQNAFFAPSLA*LSPWRSVAFLT Trigger: AGTTAGAAAGGCCACGGACCTCCAAGGGGAAAGCAAGGCCAAAGATGGGGCGAAGAAAGCGTTCTGCAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000130037.2 ENSMUST00000173744.8 |
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| CDS TCA 72 bp | CTTGGTGAGGCAAGAACTCATCCAGGGGCTTCTCTATaGCAGAACATGTGGAGTCTGAGCTACTGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGEARTHPGASL*QNMWSLSYCCC Trigger: GCAGCAGCAGTAGCTCAGACTCCACATGTTCTGTCATAGAGAAGCCCCTGGATGAGTTCTTGCCTCACCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118353.9 |
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| CDS TCA 72 bp | CATTTCATCCACGCTGACGGCCTGTCTATAGCACATTaGCTTCTCTCTCTCATTGAGAGGCCGGCACCTAAC | + |
|
Preference number: 6 (lower is better) Translates to: HFIHADGLSIAH*LLSLIERPAPN Trigger: GTTAGGTGCCGGCCTCTCAATGAGAGAGAGAAGTCAATGTGCTATAGACAGGCCGTCAGCGTGGATGAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000132496.3 ENSMUST00000173744.8 |
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| CDS CCA 72 bp | AATGTCTTTGGAGGTTCGTTGGAGGAATCGGTCTTATaGACGGTGATAGTTCCCCTCATTTCATCCACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: NVFGGSLEESVL*TVIVPLISSTL Trigger: CAGCGTGGATGAAATGAGGGGAACTATCACCGTCCATAAGACCGATTCCTCCAACGAACCTCCAAAGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000132496.3 ENSMUST00000173744.8 |
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| CDS GCA 72 bp | AGACTGGTATATTTTTCCTCGATGTCCAAGCGTTCTTaGTCCTTTTCCTCCAGCTCTTTCCGAAGCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RLVYFSSMSKRS*SFSSSSFRSCS Trigger: TGAGCAGCTTCGGAAAGAGCTGGAGGAAAAGGAGCAAGAACGCTTGGACATCGAGGAAAAATATACCAGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000130037.2 ENSMUST00000173744.8 |
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| CDS GCA 72 bp | GTTTCCAGTGCTTTTCTCTCCTCGTCAATTTTCGCTTaGATTTCCACCATCTTATCTGCTTGGTCCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VSSAFLSSSIFA*ISTILSAWSLL Trigger: GAGAAGGGACCAAGCAGATAAGATGGTGGAAATGCAAGCGAAAATTGACGAGGAGAGAAAAGCACTGGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173744.8 |
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| CDS CCA 72 bp | GACTTCAAATGGGTCTCTCTCCTTCTTGTCAGGGACTaGAGTTTGTTTCCTCATGTTATTTCCTGTGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: DFKWVSLLLVRD*SLFPHVISCVG Trigger: GCCTACACAGGAAATAACATGAGGAAACAAACTCCAGTCCCTGACAAGAAGGAGAGAGACCCATTTGAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000130037.2 ENSMUST00000173744.8 |
||
| CDS CAA 90 bp | TCTGGTCCAAAAACAGTATCGAAAGTAAATGTCTTTGGAGGTTCGTaGGAGGAATCGGTCTTATGGACGGTGATAGTTCCCCTCATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGPKTVSKVNVFGGS*EESVLWTVIVPLIS Trigger: TGAAATGAGGGGAACTATCACCGTCCATAAGACCGATTCCTCCAACGAACCTCCAAAGACATTTACTTTCGATACTGTTTTTGGACCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000132496.3 ENSMUST00000173744.8 |
||
| CDS CCA 72 bp | TTCTGGTCCAAAAACAGTATCGAAAGTAAATGTCTTTaGAGGTTCGTTGGAGGAATCGGTCTTATGGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: FWSKNSIESKCL*RFVGGIGLMDG Trigger: ACCGTCCATAAGACCGATTCCTCCAACGAACCTCCAAAGACATTTACTTTCGATACTGTTTTTGGACCAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000132496.3 ENSMUST00000173744.8 |
||
| CDS CAA 72 bp | AAAACAGTATCGAAAGTAAATGTCTTTGGAGGTTCGTaGGAGGAATCGGTCTTATGGACGGTGATAGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: KTVSKVNVFGGS*EESVLWTVIVP Trigger: GGGAACTATCACCGTCCATAAGACCGATTCCTCCAACGAACCTCCAAAGACATTTACTTTCGATACTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000132496.3 ENSMUST00000173744.8 |
||
| CDS TCA 72 bp | ACATCAGGCCTTTCTTTAACCTCTAACCTCTGGGTCTaGTCTTTACCCAAAAGGTCTCGAACTTCTTCATTA | + |
|
Preference number: 6 (lower is better) Translates to: TSGLSLTSNLWV*SLPKRSRTSSL Trigger: TAATGAAGAAGTTCGAGACCTTTTGGGTAAAGATCAGACCCAGAGGTTAGAGGTTAAAGAAAGGCCTGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000132496.3 ENSMUST00000173744.8 |
||
| CDS GCA 72 bp | TTCTTTAATTTCTTGGTCTTTCCTTGTGCCTCCTCTTaGAGACTGGTATATTTTTCCTCGATGTCCAAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: FFNFLVFPCASS*RLVYFSSMSKR Trigger: ACGCTTGGACATCGAGGAAAAATATACCAGTCTGCAAGAGGAGGCACAAGGAAAGACCAAGAAATTAAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000130037.2 ENSMUST00000173744.8 |
||
| CDS CAA 72 bp | TATATATCTCCAAGTATGACACTCGAACCAAAAACCTaGTGTCGCCCTCTGCTTTTGCGATGTGACCAAATA | + |
|
Preference number: 6 (lower is better) Translates to: YISPSMTLEPKT*CRPLLLRCDQI Trigger: TATTTGGTCACATCGCAAAAGCAGAGGGCGACACAAGGTTTTTGGTTCGAGTGTCATACTTGGAGATATATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000057330.15 ENSMUST00000118353.9 ENSMUST00000120613.9 ENSMUST00000132496.3 ENSMUST00000173744.8 |
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