Pregenerated sensors for KIF2C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028678Ensembl transcript IDs: ENSMUST00000065896.9, ENSMUST00000106436.8, ENSMUST00000153953.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAAGTTTTCTaGGGAGGGGAAGAGGCTAGTGTGATATCAAACAGATCTTTATTT | + |
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Preference number: 1 (lower is better) Translates to: SNSVPNQSQKVPKVF*GGEEASVISNRSLF Trigger: AAATAAAGATCTGTTTGATATCACACTAGCCTCTTCCCCTCCCCAGAAAACTTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTCACAGCGGCACACGGTTTCCACCAGCAGTaGATGCTGAGCCAGGGATCC | + |
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Preference number: 2 (lower is better) Translates to: GSGQAPPLFQSTHLTAAHGFHQQ*MLSQGS Trigger: GGATCCCTGGCTCAGCATCCACTGCTGGTGGAAACC...GTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| 3UTR-3UTR TCA 90 bp | GACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCTCACAGCAGCTTTCCTGGGCATaGTGCCCTGAGGTTGAAATT | + |
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Preference number: 2 (lower is better) Translates to: DKLRLSSRARTSQRHTSQQLSWA*CPEVEI Trigger: AATTTCAACCTCAGGGCATCATGCCCAGGAAAGCTG...CTGTGAGGTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCACCAAAGCCAGAAGGTaGCCAAAGTTTTCTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LDRGWYCRQRQQEADKLRTKARR*PKFSGE Trigger: CTCCCCAGAAAACTTTGGGCACCTTCTGGCTTTGGT...GCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| 3UTR-3UTR TCA 90 bp | AATTTACCCAACCTGTCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAAGGGAAGAGGCTAGTGTaGTATCAAACAGATCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: NLPNLSNSVPNQSQKVPKGKRLV*YQTDLY Trigger: ATAAAGATCTGTTTGATATCACACTAGCCTCTTCCC...TTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGACAGGTTGGGTAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| 3UTR TCA 72 bp | GAAAAGAACATCGCCTCTCCCCAGCTTTCCTGGGCATaGTGCCCTGAGGTTGAAATTTACCCAACCTGTCCA | + |
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Preference number: 3 (lower is better) Translates to: EKNIASPQLSWA*CPEVEIYPTCP Trigger: TGGACAGGTTGGGTAAATTTCAACCTCAGGGCATCATGCCCAGGAAAGCTGGGGAGAGGCGATGTTCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| 3UTR CCA 72 bp | GTTCCTAACCAAAGCCAGAAGGTGCCCAAAGTTTTCTaGGGAGGGGAAGAGGCTAGTGTGATATCAAACAGA | + |
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Preference number: 3 (lower is better) Translates to: VPNQSQKVPKVF*GGEEASVISNR Trigger: TCTGTTTGATATCACACTAGCCTCTTCCCCTCCCCAGAAAACTTTGGGCACCTTCTGGCTTTGGTTAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | CTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGCCTGCACCTGCTGCCTaGTGTCCTCCAGCACACGTA | + |
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Preference number: 4 (lower is better) Translates to: LQAEAAGSGQAPPLFQSTPAPAA*CPPAHV Trigger: TACGTGTGCTGGAGGACAGCAGGCAGCAGGTGCAGG...CGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | GGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTCACAGCGGCACACGAGTCCCTCAGCACCTaGGTCAGCTTGCTCTCACGG | + |
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Preference number: 4 (lower is better) Translates to: GSGQAPPLFQSTHLTAAHESLST*VSLLSR Trigger: CCGTGAGAGCAAGCTGACCCAGGTGCTGAGGGACTC...GTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | CTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGACAACCTGCACCTGCTaGCTGCTGTCCTCCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: LQAEAAGSGQAPPLFQSTTTCTC*LLSSST Trigger: TGTGCTGGAGGACAGCAGGCAGCAGGTGCAGGTTGT...CGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | TTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCTGCAGTCCCACAACCTaGACCTGCTGCCTGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: LDRGWYCRQRQQEADKLRCSPTT*TCCLLS Trigger: GGACAGCAGGCAGCAGGTGCAGGTTGTGGGACTGCA...GCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | CATGAGTGCTTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACCAGGAGGCCCGAGGGTaGCTGGGAATGGCAAACTGC | + |
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Preference number: 4 (lower is better) Translates to: HECLDRGWYCRQRQQEADQEARG*LGMANC Trigger: GCAGTTTGCCATTCCCAGCCACCCTCGGGCCTCCTG...GTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAAGCACTCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR TCA 90 bp | CATGAGTGCTTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACTCACGGAACGGGGTGTaGGCCTTGTTCTGTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HECLDRGWYCRQRQQEADSRNGV*ALFCPS Trigger: GCTGGGACAGAACAAGGCTCACACCCCGTTCCGTGA...GTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAAGCACTCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | TTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCCCTCCATGCGAGTCTaGCGGTCAGCACTAGATGTG | + |
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Preference number: 4 (lower is better) Translates to: LDRGWYCRQRQQEADKLRPSMRV*RSALDV Trigger: CACATCTAGTGCTGACCGGCAGACTCGCATGGAGGG...GCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | GACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCTCACAGTTTCTGCTCCCTCCATaGGAGTCTGCCGGTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: DKLRLSSRARTSQRHTSQFLLPP*ESAGQH Trigger: GTGCTGACCGGCAGACTCGCATGGAGGGAGCAGAAA...CTGTGAGGTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | GGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCTTAGCTCCGAGTTCTaGGCCCTCTTCTCTTCACGC | + |
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Preference number: 4 (lower is better) Translates to: GSGQAPPLFQSTHLTAAHLSSEF*ALFSSR Trigger: GCGTGAAGAGAAGAGGGCCCAGAACTCGGAGCTAAG...GTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | GGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTTGCCTGGTGAGATCATaGCGATCATGCAGGTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: GRGSRKRTSSASLPEHAPCLVRS*RSCRSS Trigger: CGAGGACCTGCATGATCGCCATGATCTCACCAGGCA...AGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR TCA 90 bp | CTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGGGAGCTTATGCCTGGTaGGATCATGGCGATCATGCA | + |
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Preference number: 4 (lower is better) Translates to: LQAEAAGSGQAPPLFQSTGAYAW*DHGDHA Trigger: TGCATGATCGCCATGATCTCACCAGGCATAAGCTCC...CGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR TCA 90 bp | TTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCGGGGGCTTAGCTCCTTaGCTCTGTCTGCGTATCTCA | + |
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Preference number: 4 (lower is better) Translates to: LDRGWYCRQRQQEADKLRGGLAP*LCLRIS Trigger: TGAGATACGCAGACAGAGTCAAGGAGCTAAGCCCCC...GCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | GACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCTCACAGGAACTTCTGAGACAGTaGACATGCGAGTGGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: DKLRLSSRARTSQRHTSQELLRQ*TCEWSG Trigger: GCCGCTCCACTCGCATGTCCACTGTCTCAGAAGTTC...CTGTGAGGTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR TCA 90 bp | CTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGAGGGATTCGAACTTCTaGGACAGTGGACATGCGAGT | + |
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Preference number: 4 (lower is better) Translates to: LQAEAAGSGQAPPLFQSTRDSNF*DSGHAS Trigger: ACTCGCATGTCCACTGTCTCAGAAGTTCGAATCCCT...CGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | TACTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACTGAGACAGTGGACATaGGAGTGGAGCGGCTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: YCRQRQQEADKLRLSSRALRQWT*EWSGFE Trigger: TTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAG...TGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAGTA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | GACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCTCACAGTACGTTTTCCTGCAGTaGCAGACTGTCCTTCGGTCG | + |
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Preference number: 4 (lower is better) Translates to: DKLRLSSRARTSQRHTSQYVFLQ*QTVLRS Trigger: CGACCGAAGGACAGTCTGCCACTGCAGGAAAACGTA...CTGTGAGGTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | CTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCTCACAGCGGCACCTCGCAGGGAGCGGGAGGAATTaGAGTTGGCAAATGTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: LSSRARTSQRHTSQRHLAGSGRN*SWQMFV Trigger: GACAAACATTTGCCAACTCCAATTCCTCCCGCTCCC...TGCGAGGTGCCGCTGTGAGGTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | GGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTCACAGCGGCACACTCTCCACGTTCACTGTaGTTATATTGGCGGGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: GSGQAPPLFQSTHLTAAHSPRSL*LYWRGE Trigger: TTCACCCCGCCAATATAAGCACAGTGAACGTGGAGA...GTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | GACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCTCACAGCCCTCGTTCATTCCCTaGCAGATCCACCAAAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: DKLRLSSRARTSQRHTSQPSFIP*QIHQRE Trigger: TTCTCTTTGGTGGATCTGGCAGGGAATGAACGAGGG...CTGTGAGGTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | CTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCTCACAGCGGCACCTCGCAAATCGTCTGTACCAGTaGCCTTGCTGTGAACCTGTA | + |
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Preference number: 4 (lower is better) Translates to: LSSRARTSQRHTSQRHLANRLYQ*PCCEPV Trigger: TACAGGTTCACAGCAAGGCCACTGGTACAGACGATT...TGCGAGGTGCCGCTGTGAGGTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | CTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCTCACAGCGGCACCTCGCAGAGCTCAAGCCAGTTTaGTCCTTGCTGTATGATCTC | + |
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Preference number: 4 (lower is better) Translates to: LSSRARTSQRHTSQRHLAELKPV*SLLYDL Trigger: GAGATCATACAGCAAGGACCAAACTGGCTTGAGCTC...TGCGAGGTGCCGCTGTGAGGTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | GGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTCACAGCGGCACACTGTCAGGGCAGATTCTaGTTTGTTCACAAAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GSGQAPPLFQSTHLTAAHCQGRF*FVHKGL Trigger: GAGACCTTTGTGAACAAAGCAGAATCTGCCCTGACA...GTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | TACTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCATTCCGGTACCGAGGCTaGTTCTTCAGAAGGAAGACA | + |
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Preference number: 4 (lower is better) Translates to: YCRQRQQEADKLRLSSRAFRYRG*FFRRKT Trigger: TGTCTTCCTTCTGAAGAACCAGCCTCGGTACCGGAA...TGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAGTA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | CTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGGGGAGGAATTGGAGTTaGCAAATGTTTGTCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LQAEAAGSGQAPPLFQSTGRNWS*QMFVQK Trigger: CTTCTGGACAAACATTTGCCAACTCCAATTCCTCCC...CGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | CCTCTCCCCAGCTTTCCTGGGCATGATGCCCTGAGGTTGAAATTTACCCAACCTCCACTGGGTCCGCTGTaGGGGCTTAGCTCCTTGACT | + |
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Preference number: 4 (lower is better) Translates to: PLPSFPGHDALRLKFTQPPLGPL*GLSSLT Trigger: AGTCAAGGAGCTAAGCCCCCACAGCGGACCCAGTGG...AGGTTGGGTAAATTTCAACCTCAGGGCATCATGCCCAGGAAAGCTGGGGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR TCA 90 bp | CATGAGTGCTTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACTGCTGCGTTGAATGTTaGTGGAGAGACCAGGAAACA | + |
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Preference number: 4 (lower is better) Translates to: HECLDRGWYCRQRQQEADCCVEC*WRDQET Trigger: TGTTTCCTGGTCTCTCCATCAACATTCAACGCAGCA...GTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAAGCACTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR TCA 90 bp | CATGAGTGCTTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACTCCAGCTCCCTGATCTaGGTCATGGCTTCATTAAAG | + |
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Preference number: 4 (lower is better) Translates to: HECLDRGWYCRQRQQEADSSSLI*VMASLK Trigger: CTTTAATGAAGCCATGACTCAGATCAGGGAGCTGGA...GTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAAGCACTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | CATGAGTGCTTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACGAGCTCTGGGTTTATTaGAGCCACATCGTCAATGTC | + |
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Preference number: 4 (lower is better) Translates to: HECLDRGWYCRQRQQEADELWVY*SHIVNV Trigger: GACATTGACGATGTGGCTGCAATAAACCCAGAGCTC...GTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAAGCACTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | CATGAGTGCTTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACCCCAGTTTGGAAAGCTaGTGTCATATTCCTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: HECLDRGWYCRQRQQEADPSLES*CHIPVL Trigger: GAGCACAGGAATATGACAGCAGCTTTCCAAACTGGG...GTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAAGCACTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | TACTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACCAGGAGGAGACACTTaGTGGGAACAGAAATCACAT | + |
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Preference number: 4 (lower is better) Translates to: YCRQRQQEADKLRLSSRAPGGDT*WEQKSH Trigger: ATGTGATTTCTGTTCCCAGCAAGTGTCTCCTCCTGG...TGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | GACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCTCACAGTTTAACTTGGGTTCATaGACCAGGAGGAGACACTTG | + |
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Preference number: 4 (lower is better) Translates to: DKLRLSSRARTSQRHTSQFNLGS*TRRRHL Trigger: CAAGTGTCTCCTCCTGGTGCATGAACCCAAGTTAAA...CTGTGAGGTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | CATGAGTGCTTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACATTCACAGGAGCTTATaGCTGGTGAGATCATGGCGA | + |
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Preference number: 4 (lower is better) Translates to: HECLDRGWYCRQRQQEADIHRSL*LVRSWR Trigger: TCGCCATGATCTCACCAGGCATAAGCTCCTGTGAAT...GTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAAGCACTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | CCTCTCCCCAGCTTTCCTGGGCATGATGCCCTGAGGTTGAAATTTACCCAACCTGCAATTCTGTCACTGTaGAGCAGGAGGCCCGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: PLPSFPGHDALRLKFTQPAILSL*SRRPEG Trigger: ACCCTCGGGCCTCCTGCTCCACAGTGACAGAATTGC...AGGTTGGGTAAATTTCAACCTCAGGGCATCATGCCCAGGAAAGCTGGGGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | CTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCTCACAGCGGCACCTCGCAGGCAAATTCCCAGTTTaGAAAGCTGCTGTCATATTC | + |
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Preference number: 4 (lower is better) Translates to: LSSRARTSQRHTSQRHLAGKFPV*KAAVIF Trigger: GAATATGACAGCAGCTTTCCAAACTGGGAATTTGCC...TGCGAGGTGCCGCTGTGAGGTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | CTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCTCACAGCGGCACCTCGCATTCTTGTTTATTCAGTaGGCGTTTCCTGACACAGAC | + |
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Preference number: 4 (lower is better) Translates to: LSSRARTSQRHTSQRHLAFLFIQ*AFPDTD Trigger: GTCTGTGTCAGGAAACGCCCACTGAATAAACAAGAA...TGCGAGGTGCCGCTGTGAGGTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | CATGAGTGCTTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACGGAGGAGACACTTGCTaGGAACAGAAATCACATCGA | + |
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Preference number: 4 (lower is better) Translates to: HECLDRGWYCRQRQQEADGGDTC*EQKSHR Trigger: TCGATGTGATTTCTGTTCCCAGCAAGTGTCTCCTCC...GTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAAGCACTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR TCA 90 bp | CCTCTCCCCAGCTTTCCTGGGCATGATGCCCTGAGGTTGAAATTTACCCAACCTTCGAGTTCTCCCCAATaGACGAGTCCCTCAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: PLPSFPGHDALRLKFTQPSSSPQ*TSPSAP Trigger: AGGTGCTGAGGGACTCGTTCATTGGGGAGAACTCGA...AGGTTGGGTAAATTTCAACCTCAGGGCATCATGCCCAGGAAAGCTGGGGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | GGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCAATGTCAATCTCTTTaGCTTTTGTGGTACCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GSGQAPPLFQSTHLTAAHQCQSL*LLWYLL Trigger: AAGGAGGTACCACAAAAGGCAAAGAGATTGACATTG...GTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | GGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTAGCTGTCTCATCAAATaGAAAGTCAAAGCAGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: GRGSRKRTSSASLPEHAPSCLIK*KVKAES Trigger: GCTTTCTGCTTTGACTTTGCATTTGATGAGACAGCT...AGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | CATGAGTGCTTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACAGACTTGTTAATTTCTaGTCCCTCCATGCGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HECLDRGWYCRQRQQEADRLVNF*SLHASL Trigger: CAGACTCGCATGGAGGGAGCAGAAATTAACAAGTCT...GTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAAGCACTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR TCA 90 bp | TTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCAATTTTGGAGTTGACTaGTTTGCGTTTTTGCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LDRGWYCRQRQQEADKLRNFGVD*FAFLLR Trigger: CCGAAGCAAAAACGCAAATCAGTCAACTCCAAAATT...GCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | CCCAACCTGTCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAAGTTTTCCAGTGGACATGCGAGTaGAGCGGCTTCGAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PNLSNSVPNQSQKVPKVFQWTCE*SGFEGL Trigger: AAGGCCTTCGAAGCCGCTCCACTCGCATGTCCACTG...GAAAACTTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGACAGGTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | CTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGTGTAGACAACTTCATTaGAAGCTGTCTCATCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LQAEAAGSGQAPPLFQSTCRQLH*KLSHQM Trigger: CATTTGATGAGACAGCTTCCAATGAAGTTGTCTACA...CGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR TCA 90 bp | TACTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACTGGAATTTTGGAGTTaGCTGATTTGCGTTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YCRQRQQEADKLRLSSRALEFWS*LICVFA Trigger: AGCAAAAACGCAAATCAGTCAACTCCAAAATTCCAG...TGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR TCA 90 bp | CCTCTCCCCAGCTTTCCTGGGCATGATGCCCTGAGGTTGAAATTTACCCAACCTCCAGTGGCCTTGCTGTaGACCTGTAGACAACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLPSFPGHDALRLKFTQPPVALL*TCRQLH Trigger: ATGAAGTTGTCTACAGGTTCACAGCAAGGCCACTGG...AGGTTGGGTAAATTTCAACCTCAGGGCATCATGCCCAGGAAAGCTGGGGAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | CCCAACCTGTCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAAGTTTTCTTGCAGATGAGGTACTaGGGGTGGAGTGGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PNLSNSVPNQSQKVPKVFLQMRY*GWSGLA Trigger: AGCAAGCCCACTCCACCCGCAGTACCTCATCTGCAA...GAAAACTTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGACAGGTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | CCTCTCCCCAGCTTTCCTGGGCATGATGCCCTGAGGTTGAAATTTACCCAACCTCTGTACCAGTGGCCTTaGTGTGAACCTGTAGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLPSFPGHDALRLKFTQPLYQWP*CEPVDN Trigger: GTTGTCTACAGGTTCACAGCAAGGCCACTGGTACAG...AGGTTGGGTAAATTTCAACCTCAGGGCATCATGCCCAGGAAAGCTGGGGAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | TACTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCAGTAGATCCCTTTAGATaGGTTCTGACTTTTACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YCRQRQQEADKLRLSSRAVDPFR*VLTFTR Trigger: TCTGGTAAAAGTCAGAACGCATCTAAAGGGATCTAC...TGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CCA 90 bp | CTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCTCACAGCGGCACCTCGCACATCGATTTCTTTCTTaGCCAGTTCTTGTTTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSRARTSQRHTSQRHLAHRFLS*PVLVYS Trigger: TGAATAAACAAGAACTGGCCAAGAAAGAAATCGATG...TGCGAGGTGCCGCTGTGAGGTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR TCA 90 bp | AATTTACCCAACCTGTCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAACATCATCAGCACAGGTaGCCAGGTACTCCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NLPNLSNSVPNQSQKVPKHHQHR*PGTPAV Trigger: GACTGCAGGAGTACCTGGTCACCTGTGCTGATGATG...TTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGACAGGTTGGGTAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR TCA 90 bp | AATTTACCCAACCTGTCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAATCAGTGGGCGTTTCCTaGCACAGACACAGATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLPNLSNSVPNQSQKVPKSVGVS*HRHRSC Trigger: ACAGGATCTGTGTCTGTGTCAGGAAACGCCCACTGA...TTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGACAGGTTGGGTAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | AATTTACCCAACCTGTCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAAGTGGGCTTGCTCTTCTaGCTCCTCACTGACCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: NLPNLSNSVPNQSQKVPKVGLLF*LLTDHQ Trigger: TTGATGGTCAGTGAGGAGGCAGAAGAGCAAGCCCAC...TTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGACAGGTTGGGTAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR TCA 90 bp | CCCAACCTGTCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAAGTTTTCTCCATTTCATTCTCCTaGGCAGGGATTCGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNLSNSVPNQSQKVPKVFSISFS*AGIRTS Trigger: AGAAGTTCGAATCCCTGCTCAGGAGAATGAAATGGA...GAAAACTTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGACAGGTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR TCA 90 bp | AATTTACCCAACCTGTCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAACTTCTGCCTCCTCACTaGCCATCAACAACGGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: NLPNLSNSVPNQSQKVPKLLPPH*PSTTAI Trigger: AATTGCCGTTGTTGATGGTCAGTGAGGAGGCAGAAG...TTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGACAGGTTGGGTAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR GCA 90 bp | AATTTACCCAACCTGTCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAAAGCCAGTTTGGTCCTTaGTGTATGATCTCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLPNLSNSVPNQSQKVPKSQFGP*CMISLS Trigger: GCTCAGAGAGATCATACAGCAAGGACCAAACTGGCT...TTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGACAGGTTGGGTAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR TCA 90 bp | AATTTACCCAACCTGTCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAAACTTGGCCTTTTTGTTaGGCAGATCAAACACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLPNLSNSVPNQSQKVPKTWPFC*ADQTPS Trigger: GGAAGGTGTTTGATCTGCTCAACAAAAAGGCCAAGT...TTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGACAGGTTGGGTAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS TCA 90 bp | GAGTCCCTCAGCACCTGGGTCAGCTTGCTCTCACGGAACGGGGTGTaGGCCTTGTTCTGTCCCAGCGCCCGGATGCACTCCTTCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ESLSTWVSLLSRNGV*ALFCPSARMHSFRA Trigger: GGCTCTGAAGGAGTGCATCCGGGCGCTGGGACAGAACAAGGCTCACACCCCGTTCCGTGAGAGCAAGCTGACCCAGGTGCTGAGGGACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 90 bp | GTCACTGTGGAGCAGGAGGCCCGAGGGTGGCTGGGAATGGCAAACTaGTTGCGAGAGTTTGTAGGCACAGGCAGCTCCACCTCCATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VTVEQEARGWLGMAN*LREFVGTGSSTSIS Trigger: TGAAATGGAGGTGGAGCTGCCTGTGCCTACAAACTCTCGCAAGCAGTTTGCCATTCCCAGCCACCCTCGGGCCTCCTGCTCCACAGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS-3UTR CAA 90 bp | CTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGACCAGGAGGAGACACTaGCTGGGAACAGAAATCACA | + |
|
Preference number: 5 (lower is better) Translates to: LQAEAAGSGQAPPLFQSTTRRRH*LGTEIT Trigger: TGTGATTTCTGTTCCCAGCAAGTGTCTCCTCCTGGT...CGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CAA 90 bp | CTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGACAGATCTCCACCCATaGTATGTGTCTTCCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LQAEAAGSGQAPPLFQSTTDLHP*YVSSHC Trigger: GCAGTGGGAAGACACATACAATGGGTGGAGATCTGT...CGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CAA 90 bp | CTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGTGGGAGCGGGAGGAATaGGAGTTGGCAAATGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LQAEAAGSGQAPPLFQSTWEREE*ELANVC Trigger: ACAAACATTTGCCAACTCCAATTCCTCCCGCTCCCA...CGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS TCA 90 bp | ATGAGGTACTGCGGGTGGAGTGGGCTTGCTCTTCTGCCTCCTCACTaGCCATCAACAACGGCAATTCTGTCACTGTGGAGCAGGAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MRYCGWSGLALLPPH*PSTTAILSLWSRRP Trigger: GGGCCTCCTGCTCCACAGTGACAGAATTGCCGTTGTTGATGGTCAGTGAGGAGGCAGAAGAGCAAGCCCACTCCACCCGCAGTACCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 90 bp | CGCCCGGATGCACTCCTTCAGAGCCAGGAGAGACTTGTTAATTTCTaGTCCCTCCATGCGAGTCTGCCGGTCAGCACTAGATGTGTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPDALLQSQERLVNF*SLHASLPVSTRCVG Trigger: GCCGACACATCTAGTGCTGACCGGCAGACTCGCATGGAGGGAGCAGAAATTAACAAGTCTCTCCTGGCTCTGAAGGAGTGCATCCGGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS-3UTR CAA 90 bp | CTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGCAATCTCTTTGCCTTTaGTGGTACCTCCTTCGATCC | + |
|
Preference number: 5 (lower is better) Translates to: LQAEAAGSGQAPPLFQSTQSLCL*WYLLRS Trigger: GGATCGAAGGAGGTACCACAAAAGGCAAAGAGATTG...CGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CAA 90 bp | CTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGTCCAGCACACGTAACTaGGCCTTTTTGTTGAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQAEAAGSGQAPPLFQSTSSTRN*AFLLSR Trigger: TCTGCTCAACAAAAAGGCCAAGTTACGTGTGCTGGA...CGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS TCA 90 bp | GAACCGGCTGCTCTCCACTGGGTCCGCTGTGGGGGCTTAGCTCCTTaGCTCTGTCTGCGTATCTCAGCGTGTTTAAGGTGTATTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: EPAALHWVRCGGLAP*LCLRISACLRCIHR Trigger: CCTGTGAATACACCTTAAACACGCTGAGATACGCAGACAGAGTCAAGGAGCTAAGCCCCCACAGCGGACCCAGTGGAGAGCAGCCGGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 90 bp | ACATCATCAGCACAGGTGACCAGGTACTCCTGCAGTCCCACAACCTaGACCTGCTGCCTGCTGTCCTCCAGCACACGTAACTTGGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TSSAQVTRYSCSPTT*TCCLLSSSTRNLAF Trigger: AAAGGCCAAGTTACGTGTGCTGGAGGACAGCAGGCAGCAGGTGCAGGTTGTGGGACTGCAGGAGTACCTGGTCACCTGTGCTGATGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 90 bp | AGAGCCAGGAGAGACTTGTTAATTTCTGCTCCCTCCATGCGAGTCTaGCGGTCAGCACTAGATGTGTCGGCCCCTCGTTCATTCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RARRDLLISAPSMRV*RSALDVSAPRSFPA Trigger: GGCAGGGAATGAACGAGGGGCCGACACATCTAGTGCTGACCGGCAGACTCGCATGGAGGGAGCAGAAATTAACAAGTCTCTCCTGGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS-3UTR CAA 90 bp | TTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCAAGTCCACTTTTAACTaGGGTTCATGCACCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LDRGWYCRQRQQEADKLRKSTFN*GSCTRR Trigger: CCTCCTGGTGCATGAACCCAAGTTAAAAGTGGACTT...GCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS CCA 90 bp | CGAACTGAGTTCCCAGGGTTTGCAGATGAGGTACTGCGGGTGGAGTaGGCTTGCTCTTCTGCCTCCTCACTGACCATCAACAACGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RTEFPGFADEVLRVE*ACSSASSLTINNGN Trigger: ATTGCCGTTGTTGATGGTCAGTGAGGAGGCAGAAGAGCAAGCCCACTCCACCCGCAGTACCTCATCTGCAAACCCTGGGAACTCAGTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS-3UTR CAA 90 bp | CCCAACCTGTCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAAGTTTTCGCGGGTGGAGTGGGCTaGCTCTTCTGCCTCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: PNLSNSVPNQSQKVPKVFAGGVG*LFCLLT Trigger: AGTGAGGAGGCAGAAGAGCAAGCCCACTCCACCCGC...GAAAACTTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGACAGGTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CAA 90 bp | GACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCTCACAGGGGCAAATTCCCAGTTaGGAAAGCTGCTGTCATATT | + |
|
Preference number: 5 (lower is better) Translates to: DKLRLSSRARTSQRHTSQGQIPS*ESCCHI Trigger: AATATGACAGCAGCTTTCCAAACTGGGAATTTGCCC...CTGTGAGGTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CAA 90 bp | CCCAACCTGTCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAAGTTTTCAGCACCTGGGTCAGCTaGCTCTCACGGAACGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PNLSNSVPNQSQKVPKVFSTWVS*LSRNGV Trigger: CACCCCGTTCCGTGAGAGCAAGCTGACCCAGGTGCT...GAAAACTTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGACAGGTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS GCA 90 bp | TTGATCATCTTGATGACATCATCAGCACAGGTGACCAGGTACTCCTaGAGTCCCACAACCTGCACCTGCTGCCTGCTGTCCTCCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LIILMTSSAQVTRYS*SPTTCTCCLLSSST Trigger: TGTGCTGGAGGACAGCAGGCAGCAGGTGCAGGTTGTGGGACTGCAGGAGTACCTGGTCACCTGTGCTGATGATGTCATCAAGATGATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS-3UTR CAA 90 bp | GACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTCACAGCGGCACACCTCACAGCTCTTCTCTTCACGCTaGTTCTTCATTTTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: DKLRLSSRARTSQRHTSQLFSSR*FFIFSI Trigger: GATGGAGAAAATGAAGAACAAGCGTGAAGAGAAGAG...CTGTGAGGTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CAA 90 bp | CATGAGTGCTTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACGTAACCCGAAATTCTTaGATCATCCGGGCAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: HECLDRGWYCRQRQQEADVTRNS*IIRANS Trigger: GGAATTTGCCCGGATGATCAAAGAATTTCGGGTTAC...GTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAAGCACTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS TCA 90 bp | CAGCTCCACCTCCATTTCATTCTCCTGAGCAGGGATTCGAACTTCTaGGACAGTGGACATGCGAGTGGAGCGGCTTCGAAGGCCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QLHLHFILLSRDSNF*DSGHASGAASKAFF Trigger: AAAGAAGGCCTTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAGAAGTTCGAATCCCTGCTCAGGAGAATGAAATGGAGGTGGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
||
| CDS TCA 90 bp | ATCTCTCTGAGCTCTTCCAGGGCCCTCTCTTCCAGCTCCCTGATCTaGGTCATGGCTTCATTAAAGCTGGACATCTGGGAAGACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISLSSSRALSSSSLI*VMASLKLDIWEDSS Trigger: GGAGCTGTCTTCCCAGATGTCCAGCTTTAATGAAGCCATGACTCAGATCAGGGAGCTGGAAGAGAGGGCCCTGGAAGAGCTCAGAGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
||
| CDS-3UTR CAA 90 bp | TACTGCAGGCAGAGGCAGCAGGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCATTTCTTGGCCAGTTCTaGTTTATTCAGTGGGCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: YCRQRQQEADKLRLSSRAFLGQF*FIQWAF Trigger: AAACGCCCACTGAATAAACAAGAACTGGCCAAGAAA...TGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCCTGCTGCCTCTGCCTGCAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
||
| CDS-3UTR CAA 90 bp | GGAAGCGGACAAGCTCCGCCTCTCTTCCAGAGCACGCACCTCACAGCGGCACACTTTCTTGCTGTTTATTaGTTTGCTAGCCTGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSGQAPPLFQSTHLTAAHFLAVY*FASLFF Trigger: GAAGAACAGGCTAGCAAACAAATAAACAGCAAGAAA...GTGTGCCGCTGTGAGGTGCGTGCTCTGGAAGAGAGGCGGAGCTTGTCCGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
||
| CDS CCA 90 bp | CCTCCATTTCATTCTCCTGAGCAGGGATTCGAACTTCTGAGACAGTaGACATGCGAGTGGAGCGGCTTCGAAGGCCTTCTTTTAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPFHSPEQGFELLRQ*TCEWSGFEGLLLEL Trigger: CAGCTCTAAAAGAAGGCCTTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAGAAGTTCGAATCCCTGCTCAGGAGAATGAAATGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
||
| CDS-3UTR CAA 90 bp | CCCAACCTGTCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAAGTTTTCTGGGGGCTTAGCTCCTaGACTCTGTCTGCGTATCTC | + |
|
Preference number: 5 (lower is better) Translates to: PNLSNSVPNQSQKVPKVFWGLSS*TLSAYL Trigger: GAGATACGCAGACAGAGTCAAGGAGCTAAGCCCCCA...GAAAACTTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGACAGGTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
||
| CDS-3UTR CAA 90 bp | CATGAGTGCTTAGACCGAGGGTGGTACTGCAGGCAGAGGCAGCAGGAAGCGGACCATTGGTGCCGTTTCTaGCTGTTTATTTGTTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: HECLDRGWYCRQRQQEADHWCRF*LFICLL Trigger: TAGCAAACAAATAAACAGCAAGAAACGGCACCAATG...GTCCGCTTCCTGCTGCCTCTGCCTGCAGTACCACCCTCGGTCTAAGCACTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
||
| CDS GCA 90 bp | GAGTTGACTGATTTGCGTTTTTGCTTCGGGACCGTTACGTTTTCCTaGAGTGGCAGACTGTCCTTCGGTCGTAAGGGAAGAAGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ELTDLRFCFGTVTFS*SGRLSFGRKGRSCR Trigger: CCTACAGCTTCTTCCCTTACGACCGAAGGACAGTCTGCCACTGCAGGAAAACGTAACGGTCCCGAAGCAAAAACGCAAATCAGTCAACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 ENSMUST00000153953.2 |
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| CDS CCA 90 bp | TCTCCTGAGCAGGGATTCGAACTTCTGAGACAGTGGACATGCGAGTaGAGCGGCTTCGAAGGCCTTCTTTTAGAGCTGGAATTTTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPEQGFELLRQWTCE*SGFEGLLLELEFWS Trigger: ACTCCAAAATTCCAGCTCTAAAAGAAGGCCTTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAGAAGTTCGAATCCCTGCTCAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS-3UTR CAA 90 bp | CCTCTCCCCAGCTTTCCTGGGCATGATGCCCTGAGGTTGAAATTTACCCAACCTGTCAAAGCAGAAAGCTaGGTTCTCCAGGTACTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PLPSFPGHDALRLKFTQPVKAES*VLQVLR Trigger: ACGAAGTACCTGGAGAACCAAGCTTTCTGCTTTGAC...AGGTTGGGTAAATTTCAACCTCAGGGCATCATGCCCAGGAAAGCTGGGGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CAA 90 bp | CCTCTCCCCAGCTTTCCTGGGCATGATGCCCTGAGGTTGAAATTTACCCAACCTCAGGCACTGCCCATGTaGATCATCTTGATGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: PLPSFPGHDALRLKFTQPQALPM*IILMTS Trigger: TGATGTCATCAAGATGATCAACATGGGCAGTGCCTG...AGGTTGGGTAAATTTCAACCTCAGGGCATCATGCCCAGGAAAGCTGGGGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS-3UTR CAA 90 bp | CCCAACCTGTCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAAGTTTTCGGAGTTGGCAAATGTTaGTCCAGAAGTCCTGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PNLSNSVPNQSQKVPKVFGVGKC*SRSPAG Trigger: GCCTGCAGGACTTCTGGACAAACATTTGCCAACTCC...GAAAACTTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGACAGGTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS CCA 90 bp | CAGGGCAGATTCTGCTTTGTTCACAAAGGTCTCCAAGTCATAGTCTaGCTGATCTGTCATCTCGGAGAGCTCAAGCCAGTTTGGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QGRFCFVHKGLQVIV*LICHLGELKPVWSL Trigger: CAAGGACCAAACTGGCTTGAGCTCTCCGAGATGACAGATCAGCCAGACTATGACTTGGAGACCTTTGTGAACAAAGCAGAATCTGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 90 bp | TTTCATTCTCCTGAGCAGGGATTCGAACTTCTGAGACAGTGGACATaGGAGTGGAGCGGCTTCGAAGGCCTTCTTTTAGAGCTGGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: FHSPEQGFELLRQWT*EWSGFEGLLLELEF Trigger: AAATTCCAGCTCTAAAAGAAGGCCTTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAGAAGTTCGAATCCCTGCTCAGGAGAATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 90 bp | CAGAAGGAAGACATCCCGGGAAGCCATGGCGTAGATCCCTTTAGATaGGTTCTGACTTTTACCAGACAGATCTCCACCCATTGTATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QKEDIPGSHGVDPFR*VLTFTRQISTHCMC Trigger: ACACATACAATGGGTGGAGATCTGTCTGGTAAAAGTCAGAACGCATCTAAAGGGATCTACGCCATGGCTTCCCGGGATGTCTTCCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 90 bp | TCTTGTTTATTCAGTGGGCGTTTCCTGACACAGACACAGATCCTGTaGTCTTCGATAGGGTCTGTCACAGTAAGCGGGCTACATTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: SCLFSGRFLTQTQIL*SSIGSVTVSGLHSI Trigger: TATGGAATGTAGCCCGCTTACTGTGACAGACCCTATCGAAGAGCACAGGATCTGTGTCTGTGTCAGGAAACGCCCACTGAATAAACAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CCA 90 bp | CTGCTGTCATATTCCTGTGCTCGCTTTATTCTTAGCTCCGAGTTCTaGGCCCTCTTCTCTTCACGCTTGTTCTTCATTTTCTCCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLSYSCARFILSSEF*ALFSSRLFFIFSIS Trigger: GGAGATGGAGAAAATGAAGAACAAGCGTGAAGAGAAGAGGGCCCAGAACTCGGAGCTAAGAATAAAGCGAGCACAGGAATATGACAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 90 bp | CTTCGATCCATTCCACCGAAACACAGGATTTCTCCACGTTCACTGTaGTTATATTGGCGGGGTGAATTAAGCCATTGCTGCGTTGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: LRSIPPKHRISPRSL*LYWRGELSHCCVEC Trigger: ACATTCAACGCAGCAATGGCTTAATTCACCCCGCCAATATAAGCACAGTGAACGTGGAGAAATCCTGTGTTTCGGTGGAATGGATCGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS GCA 90 bp | TGGTTCTCCAGGTACTTCGTTAAGTCCACTTTTAACTTGGGTTCATaGACCAGGAGGAGACACTTGCTGGGAACAGAAATCACATCGATT | + |
|
Preference number: 5 (lower is better) Translates to: WFSRYFVKSTFNLGS*TRRRHLLGTEITSI Trigger: AATCGATGTGATTTCTGTTCCCAGCAAGTGTCTCCTCCTGGTGCATGAACCCAAGTTAAAAGTGGACTTAACGAAGTACCTGGAGAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CCA 90 bp | AGAAAGCTTGGTTCTCCAGGTACTTCGTTAAGTCCACTTTTAACTTaGGTTCATGCACCAGGAGGAGACACTTGCTGGGAACAGAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: RKLGSPGTSLSPLLT*VHAPGGDTCWEQKS Trigger: TGATTTCTGTTCCCAGCAAGTGTCTCCTCCTGGTGCATGAACCCAAGTTAAAAGTGGACTTAACGAAGTACCTGGAGAACCAAGCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS-3UTR CAA 90 bp | CCCAACCTGTCCAACTCAGTTCCTAACCAAAGCCAGAAGGTGCCCAAAGTTTTCTTTAGAGCTGGAATTTaGGAGTTGACTGATTTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PNLSNSVPNQSQKVPKVFFRAGI*ELTDLR Trigger: ACGCAAATCAGTCAACTCCAAAATTCCAGCTCTAAA...GAAAACTTTGGGCACCTTCTGGCTTTGGTTAGGAACTGAGTTGGACAGGTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
||
| CDS TCA 72 bp | AGCACCTGGGTCAGCTTGCTCTCACGGAACGGGGTGTaGGCCTTGTTCTGTCCCAGCGCCCGGATGCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: STWVSLLSRNGV*ALFCPSARMHS Trigger: GGAGTGCATCCGGGCGCTGGGACAGAACAAGGCTCACACCCCGTTCCGTGAGAGCAAGCTGACCCAGGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 72 bp | GCACAGGTGACCAGGTACTCCTGCAGTCCCACAACCTaGACCTGCTGCCTGCTGTCCTCCAGCACACGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: AQVTRYSCSPTT*TCCLLSSSTRN Trigger: GTTACGTGTGCTGGAGGACAGCAGGCAGCAGGTGCAGGTTGTGGGACTGCAGGAGTACCTGGTCACCTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 72 bp | CGCAGGGCCTTGATGACTTCTCGAAGGGCTGAGAAGTaGTTCGCCTGCTTAGCCTGCTGTGTCAGGGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: RRALMTSRRAEK*FACLACCVRAD Trigger: ATCTGCCCTGACACAGCAGGCTAAGCAGGCGAAGCACTTCTCAGCCCTTCGAGAAGTCATCAAGGCCCTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CAA 72 bp | GCCTGTTCTTCCAGTTGCATGGCTAGGCGCAGGGCCTaGATGACTTCTCGAAGGGCTGAGAAGTGCTTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: ACSSSCMARRRA*MTSRRAEKCFA Trigger: GGCGAAGCACTTCTCAGCCCTTCGAGAAGTCATCAAGGCCCTGCGCCTAGCCATGCAACTGGAAGAACAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS TCA 72 bp | TGCGGGTGGAGTGGGCTTGCTCTTCTGCCTCCTCACTaGCCATCAACAACGGCAATTCTGTCACTGTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CGWSGLALLPPH*PSTTAILSLWS Trigger: GCTCCACAGTGACAGAATTGCCGTTGTTGATGGTCAGTGAGGAGGCAGAAGAGCAAGCCCACTCCACCCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS TCA 72 bp | TCATGGCGATCATGCAGGTCCTCGAGTTCTCCCCAATaGACGAGTCCCTCAGCACCTGGGTCAGCTTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SWRSCRSSSSPQ*TSPSAPGSACS Trigger: AGAGCAAGCTGACCCAGGTGCTGAGGGACTCGTTCATTGGGGAGAACTCGAGGACCTGCATGATCGCCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CCA 72 bp | GGCAATTCTGTCACTGTGGAGCAGGAGGCCCGAGGGTaGCTGGGAATGGCAAACTGCTTGCGAGAGTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: GNSVTVEQEARG*LGMANCLREFV Trigger: TACAAACTCTCGCAAGCAGTTTGCCATTCCCAGCCACCCTCGGGCCTCCTGCTCCACAGTGACAGAATTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CCA 72 bp | TTCCCAGGGTTTGCAGATGAGGTACTGCGGGTGGAGTaGGCTTGCTCTTCTGCCTCCTCACTGACCATCAAC | + |
|
Preference number: 6 (lower is better) Translates to: FPGFADEVLRVE*ACSSASSLTIN Trigger: GTTGATGGTCAGTGAGGAGGCAGAAGAGCAAGCCCACTCCACCCGCAGTACCTCATCTGCAAACCCTGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CAA 72 bp | TGCTCTCCACTGGGTCCGCTGTGGGGGCTTAGCTCCTaGACTCTGTCTGCGTATCTCAGCGTGTTTAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CSPLGPLWGLSS*TLSAYLSVFKV Trigger: CACCTTAAACACGCTGAGATACGCAGACAGAGTCAAGGAGCTAAGCCCCCACAGCGGACCCAGTGGAGAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CAA 90 bp | TGTTTGCTAGCCTGTTCTTCCAGTTGCATGGCTAGGCGCAGGGCCTaGATGACTTCTCGAAGGGCTGAGAAGTGCTTCGCCTGCTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CLLACSSSCMARRRA*MTSRRAEKCFACLA Trigger: GGCTAAGCAGGCGAAGCACTTCTCAGCCCTTCGAGAAGTCATCAAGGCCCTGCGCCTAGCCATGCAACTGGAAGAACAGGCTAGCAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CAA 90 bp | TCTCCTTCACGATACACGATTTCCTCCGAACTGAGTTCCCAGGGTTaGCAGATGAGGTACTGCGGGTGGAGTGGGCTTGCTCTTCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPSRYTISSELSSQG*QMRYCGWSGLALLP Trigger: AGGCAGAAGAGCAAGCCCACTCCACCCGCAGTACCTCATCTGCAAACCCTGGGAACTCAGTTCGGAGGAAATCGTGTATCGTGAAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 72 bp | CCTGAGCAGGGATTCGAACTTCTGAGACAGTGGACATaGGAGTGGAGCGGCTTCGAAGGCCTTCTTTTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PEQGFELLRQWT*EWSGFEGLLLE Trigger: CTCTAAAAGAAGGCCTTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAGAAGTTCGAATCCCTGCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 72 bp | AGAGACTTGTTAATTTCTGCTCCCTCCATGCGAGTCTaGCGGTCAGCACTAGATGTGTCGGCCCCTCGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RDLLISAPSMRV*RSALDVSAPRS Trigger: TGAACGAGGGGCCGACACATCTAGTGCTGACCGGCAGACTCGCATGGAGGGAGCAGAAATTAACAAGTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 72 bp | GCACTCCTTCAGAGCCAGGAGAGACTTGTTAATTTCTaGTCCCTCCATGCGAGTCTGCCGGTCAGCACTAGA | + |
|
Preference number: 6 (lower is better) Translates to: ALLQSQERLVNF*SLHASLPVSTR Trigger: TCTAGTGCTGACCGGCAGACTCGCATGGAGGGAGCAGAAATTAACAAGTCTCTCCTGGCTCTGAAGGAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CCA 72 bp | CATTCTCCTGAGCAGGGATTCGAACTTCTGAGACAGTaGACATGCGAGTGGAGCGGCTTCGAAGGCCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: HSPEQGFELLRQ*TCEWSGFEGLL Trigger: AAGAAGGCCTTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAGAAGTTCGAATCCCTGCTCAGGAGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CAA 72 bp | AAGCTGGACATCTGGGAAGACAGCTCCTCCTCTTCATaGCCAGTCAGAGACGTCCCATTAGAGCTGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: KLDIWEDSSSSS*PVRDVPLELAS Trigger: GGAAGCCAGCTCTAATGGGACGTCTCTGACTGGCAATGAAGAGGAGGAGCTGTCTTCCCAGATGTCCAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS TCA 72 bp | CTCCATTTCATTCTCCTGAGCAGGGATTCGAACTTCTaGGACAGTGGACATGCGAGTGGAGCGGCTTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LHFILLSRDSNF*DSGHASGAASK Trigger: CTTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAGAAGTTCGAATCCCTGCTCAGGAGAATGAAATGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 72 bp | TTCAGTGGGCGTTTCCTGACACAGACACAGATCCTGTaGTCTTCGATAGGGTCTGTCACAGTAAGCGGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: FSGRFLTQTQIL*SSIGSVTVSGL Trigger: TAGCCCGCTTACTGTGACAGACCCTATCGAAGAGCACAGGATCTGTGTCTGTGTCAGGAAACGCCCACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 72 bp | TCTCGAAGGGCTGAGAAGTGCTTCGCCTGCTTAGCCTaGTGTGTCAGGGCAGATTCTGCTTTGTTCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRRAEKCFACLA*CVRADSALFTK Trigger: CTTTGTGAACAAAGCAGAATCTGCCCTGACACAGCAGGCTAAGCAGGCGAAGCACTTCTCAGCCCTTCGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CCA 72 bp | CAGGGATTCGAACTTCTGAGACAGTGGACATGCGAGTaGAGCGGCTTCGAAGGCCTTCTTTTAGAGCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QGFELLRQWTCE*SGFEGLLLELE Trigger: TTCCAGCTCTAAAAGAAGGCCTTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAGAAGTTCGAATCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CAA 72 bp | TGCACCTGCTGCCTGCTGTCCTCCAGCACACGTAACTaGGCCTTTTTGTTGAGCAGATCAAACACCTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: CTCCLLSSSTRN*AFLLSRSNTFP Trigger: TGGGAAGGTGTTTGATCTGCTCAACAAAAAGGCCAAGTTACGTGTGCTGGAGGACAGCAGGCAGCAGGTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 72 bp | GATTTGCGTTTTTGCTTCGGGACCGTTACGTTTTCCTaGAGTGGCAGACTGTCCTTCGGTCGTAAGGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: DLRFCFGTVTFS*SGRLSFGRKGR Trigger: TCTTCCCTTACGACCGAAGGACAGTCTGCCACTGCAGGAAAACGTAACGGTCCCGAAGCAAAAACGCAAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 ENSMUST00000153953.2 |
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| CDS GCA 72 bp | CTTCGCCTGCTTAGCCTGCTGTGTCAGGGCAGATTCTaGTTTGTTCACAAAGGTCTCCAAGTCATAGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRLLSLLCQGRF*FVHKGLQVIVW Trigger: CCAGACTATGACTTGGAGACCTTTGTGAACAAAGCAGAATCTGCCCTGACACAGCAGGCTAAGCAGGCGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CCA 72 bp | TGGCTGATCTGTCATCTCGGAGAGCTCAAGCCAGTTTaGTCCTTGCTGTATGATCTCTCTGAGCTCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WLICHLGELKPV*SLLYDLSELFQ Trigger: CTGGAAGAGCTCAGAGAGATCATACAGCAAGGACCAAACTGGCTTGAGCTCTCCGAGATGACAGATCAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CAA 90 bp | GAGTTGGCAAATGTTTGTCCAGAAGTCCTGCAGGCACTGCCCATGTaGATCATCTTGATGACATCATCAGCACAGGTGACCAGGTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: ELANVCPEVLQALPM*IILMTSSAQVTRYS Trigger: GGAGTACCTGGTCACCTGTGCTGATGATGTCATCAAGATGATCAACATGGGCAGTGCCTGCAGGACTTCTGGACAAACATTTGCCAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CAA 90 bp | GCTTCATTAAAGCTGGACATCTGGGAAGACAGCTCCTCCTCTTCATaGCCAGTCAGAGACGTCCCATTAGAGCTGGCTTCCATCACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASLKLDIWEDSSSSS*PVRDVPLELASITS Trigger: AGAAGTGATGGAAGCCAGCTCTAATGGGACGTCTCTGACTGGCAATGAAGAGGAGGAGCTGTCTTCCCAGATGTCCAGCTTTAATGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CCA 72 bp | GGTTCTCCAGGTACTTCGTTAAGTCCACTTTTAACTTaGGTTCATGCACCAGGAGGAGACACTTGCTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GSPGTSLSPLLT*VHAPGGDTCWE Trigger: TTCCCAGCAAGTGTCTCCTCCTGGTGCATGAACCCAAGTTAAAAGTGGACTTAACGAAGTACCTGGAGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CAA 72 bp | GAGCGGCTTCGAAGGCCTTCTTTTAGAGCTGGAATTTaGGAGTTGACTGATTTGCGTTTTTGCTTCGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: ERLRRPSFRAGI*ELTDLRFCFGT Trigger: GGTCCCGAAGCAAAAACGCAAATCAGTCAACTCCAAAATTCCAGCTCTAAAAGAAGGCCTTCGAAGCCGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 ENSMUST00000153953.2 |
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| CDS CAA 72 bp | AATGTTTGTCCAGAAGTCCTGCAGGCACTGCCCATGTaGATCATCTTGATGACATCATCAGCACAGGTGACC | + |
|
Preference number: 6 (lower is better) Translates to: NVCPEVLQALPM*IILMTSSAQVT Trigger: GGTCACCTGTGCTGATGATGTCATCAAGATGATCAACATGGGCAGTGCCTGCAGGACTTCTGGACAAACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CAA 90 bp | ATGCGAGTGGAGCGGCTTCGAAGGCCTTCTTTTAGAGCTGGAATTTaGGAGTTGACTGATTTGCGTTTTTGCTTCGGGACCGTTACGTTT | + |
|
Preference number: 6 (lower is better) Translates to: MRVERLRRPSFRAGI*ELTDLRFCFGTVTF Trigger: AAACGTAACGGTCCCGAAGCAAAAACGCAAATCAGTCAACTCCAAAATTCCAGCTCTAAAAGAAGGCCTTCGAAGCCGCTCCACTCGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CAA 90 bp | CGCTTTATTCTTAGCTCCGAGTTCTGGGCCCTCTTCTCTTCACGCTaGTTCTTCATTTTCTCCATCTCCTTCACGATACACGATTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RFILSSEFWALFSSR*FFIFSISFTIHDFL Trigger: GAGGAAATCGTGTATCGTGAAGGAGATGGAGAAAATGAAGAACAAGCGTGAAGAGAAGAGGGCCCAGAACTCGGAGCTAAGAATAAAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
||
| CDS CAA 90 bp | CAGAAAGCTTGGTTCTCCAGGTACTTCGTTAAGTCCACTTTTAACTaGGGTTCATGCACCAGGAGGAGACACTTGCTGGGAACAGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: QKAWFSRYFVKSTFN*GSCTRRRHLLGTEI Trigger: GATTTCTGTTCCCAGCAAGTGTCTCCTCCTGGTGCATGAACCCAAGTTAAAAGTGGACTTAACGAAGTACCTGGAGAACCAAGCTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
||
| CDS TCA 72 bp | TGCTGTCCTCCAGCACACGTAACTTGGCCTTTTTGTTaGGCAGATCAAACACCTTCCCATTGTAGATCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: CCPPAHVTWPFC*ADQTPSHCRSR Trigger: TCGAGATCTACAATGGGAAGGTGTTTGATCTGCTCAACAAAAAGGCCAAGTTACGTGTGCTGGAGGACAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS GCA 72 bp | ATTCCACCGAAACACAGGATTTCTCCACGTTCACTGTaGTTATATTGGCGGGGTGAATTAAGCCATTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: IPPKHRISPRSL*LYWRGELSHCC Trigger: GCAGCAATGGCTTAATTCACCCCGCCAATATAAGCACAGTGAACGTGGAGAAATCCTGTGTTTCGGTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS GCA 72 bp | GGTTTATTGCAGCCACATCGTCAATGTCAATCTCTTTaGCTTTTGTGGTACCTCCTTCGATCCATTCCACCG | + |
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Preference number: 6 (lower is better) Translates to: GLLQPHRQCQSL*LLWYLLRSIPP Trigger: CGGTGGAATGGATCGAAGGAGGTACCACAAAAGGCAAAGAGATTGACATTGACGATGTGGCTGCAATAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS CCA 72 bp | TTCTGCTTTGTTCACAAAGGTCTCCAAGTCATAGTCTaGCTGATCTGTCATCTCGGAGAGCTCAAGCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: FCFVHKGLQVIV*LICHLGELKPV Trigger: AACTGGCTTGAGCTCTCCGAGATGACAGATCAGCCAGACTATGACTTGGAGACCTTTGTGAACAAAGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CAA 72 bp | TTGCAGCCACATCGTCAATGTCAATCTCTTTGCCTTTaGTGGTACCTCCTTCGATCCATTCCACCGAAACAC | + |
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Preference number: 6 (lower is better) Translates to: LQPHRQCQSLCL*WYLLRSIPPKH Trigger: GTGTTTCGGTGGAATGGATCGAAGGAGGTACCACAAAAGGCAAAGAGATTGACATTGACGATGTGGCTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS CAA 72 bp | GGGTTTATTGCAGCCACATCGTCAATGTCAATCTCTTaGCCTTTTGTGGTACCTCCTTCGATCCATTCCACC | + |
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Preference number: 6 (lower is better) Translates to: GFIAATSSMSIS*PFVVPPSIHST Trigger: GGTGGAATGGATCGAAGGAGGTACCACAAAAGGCAAAGAGATTGACATTGACGATGTGGCTGCAATAAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065896.9 |
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| CDS GCA 72 bp | AGGTACTTCGTTAAGTCCACTTTTAACTTGGGTTCATaGACCAGGAGGAGACACTTGCTGGGAACAGAAATC | + |
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Preference number: 6 (lower is better) Translates to: RYFVKSTFNLGS*TRRRHLLGTEI Trigger: GATTTCTGTTCCCAGCAAGTGTCTCCTCCTGGTGCATGAACCCAAGTTAAAAGTGGACTTAACGAAGTACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CCA 72 bp | TATTCCTGTGCTCGCTTTATTCTTAGCTCCGAGTTCTaGGCCCTCTTCTCTTCACGCTTGTTCTTCATTTTC | + |
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Preference number: 6 (lower is better) Translates to: YSCARFILSSEF*ALFSSRLFFIF Trigger: GAAAATGAAGAACAAGCGTGAAGAGAAGAGGGCCCAGAACTCGGAGCTAAGAATAAAGCGAGCACAGGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CAA 72 bp | GTAAGCGGGCTACATTCCATAGTAACCCGAAATTCTTaGATCATCCGGGCAAATTCCCAGTTTGGAAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VSGLHSIVTRNS*IIRANSQFGKL Trigger: CAGCTTTCCAAACTGGGAATTTGCCCGGATGATCAAAGAATTTCGGGTTACTATGGAATGTAGCCCGCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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| CDS CAA 90 bp | TCTGTCACAGTAAGCGGGCTACATTCCATAGTAACCCGAAATTCTTaGATCATCCGGGCAAATTCCCAGTTTGGAAAGCTGCTGTCATAT | + |
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Preference number: 6 (lower is better) Translates to: SVTVSGLHSIVTRNS*IIRANSQFGKLLSY Trigger: ATATGACAGCAGCTTTCCAAACTGGGAATTTGCCCGGATGATCAAAGAATTTCGGGTTACTATGGAATGTAGCCCGCTTACTGTGACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065896.9 ENSMUST00000106436.8 |
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