Pregenerated sensors for KIF2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046755Ensembl transcript IDs: ENSMUST00000061019.6
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGTCAGCCCCTTCCAGCTaGCTCTTCCGGGTGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: ITVTRGRNVRTVSKISLLSAPSS*LFRVAL Trigger: CAAGGCCACCCGGAAGAGGCAGCTGGAAGGGGCTGA...CAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | GTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGATCTCTGCTGCCTCTTCCGGGTaGCCTTGGCAGTATCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: VTRGRNVRTVSKISLLISAASSG*PWQYLL Trigger: GAGCAGATACTGCCAAGGCCACCCGGAAGAGGCAGC...AGAGATCAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR TCA 90 bp | TTTGGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCCAGAGGTTTAAGGGGTaGGAGGCGTGGGGCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: FGQITVTRGRNVRTVSKIQRFKG*EAWGQR Trigger: CCTCTGGCCCCACGCCTCTCACCCCTTAAACCTCTG...GATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR TCA 90 bp | GATGTAAATTCTCCAAGGGGACCTTTATGCTTAGATAATTTGGACAGATTACTGTGGAGGAGTGGGCGTTaGCCGAGGTCTGACCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: DVNSPRGPLCLDNLDRLLWRSGR*PRSDRK Trigger: CTTCCGGTCAGACCTCGGTCAACGCCCACTCCTCCA...CAGTAATCTGTCCAAATTATCTAAGCATAAAGGTCCCCTTGGAGAATTTACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR GCA 90 bp | CAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTCACCTCCTGCTCCTaGAGCCCCACCACTTGGACT | + |
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Preference number: 4 (lower is better) Translates to: QITVTRGRNVRTVSKISLLTSCS*SPTTWT Trigger: AGTCCAAGTGGTGGGGCTGCAGGAGCAGGAGGTGAG...GAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | ATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGGATCCGGTGGTCTTCTaGGGGCTCCAGGCTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: ITVTRGRNVRTVSKISLLDPVVF*GLQAGH Trigger: ATGTCCAGCCTGGAGCCCCCAGAAGACCACCGGATC...CAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | CAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCACACACAGATCCGGTaGTCTTCTGGGGGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QITVTRGRNVRTVSKISLHTQIR*SSGGSR Trigger: CCTGGAGCCCCCAGAAGACCACCGGATCTGTGTGTG...GAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | CAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCAGCTGGAACACAGCATaGCTCCTGGAGGAGTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QITVTRGRNVRTVSKISLSWNTA*LLEEWA Trigger: CGCCCACTCCTCCAGGAGCCATGCTGTGTTCCAGCT...GAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR GCA 90 bp | GGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCAGGCCTTGGCAGTATCTaGTCCCCTTTCGTTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GQITVTRGRNVRTVSKISGLGSI*SPFVPS Trigger: GCTGGGAACGAAAGGGGAGCAGATACTGCCAAGGCC...TGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | GTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGATCTCTGGGATCATCAGGGTTTaGCTGTCCCCTGAGGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: VTRGRNVRTVSKISLLISGIIRV*LSPEGV Trigger: AACACCCTCAGGGGACAGCCAAACCCTGATGATCCC...AGAGATCAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | ACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGATCTGCCCTTTCGGAAGATaGACTCCACAAGAGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVTRGRNVRTVSKISLLICPFGR*TPQEAW Trigger: CCAGGCCTCTTGTGGAGTCCATCTTCCGAAAGGGCA...GATCAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | GGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACCTCCCACCACTGGTTaGACCTGCTCCATGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GQITVTRGRNVRTVSKISPPTTG*TCSMKL Trigger: CAGCTTCATGGAGCAGGTCCAACCAGTGGTGGGAGG...TGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR GCA 90 bp | GGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACAACCAGGGAAAACTTaGCGTGCAGCTTCCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GQITVTRGRNVRTVSKISQPGKT*RAASLQ Trigger: CTGGAGGGAAGCTGCACGGCAAGTTTTCCCTGGTTG...TGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR GCA 90 bp | GGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCAGAATCCCGTAGCACCTaGGTGAGTTTGCTGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GQITVTRGRNVRTVSKISESRST*VSLLAL Trigger: CAGAGCCAGCAAACTCACGCAGGTGCTACGGGATTC...TGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | ACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGATCTCATCGCAATCCACTTaGTGGCTGTACGCTGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: TVTRGRNVRTVSKISLLISSQST*WLYAGL Trigger: GAGACCAGCGTACAGCCACCAAGTGGATTGCGATGA...GATCAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | CAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGGGGGCTCCAGGCTaGACATCTTGCTGCTATCTA | + |
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Preference number: 4 (lower is better) Translates to: QITVTRGRNVRTVSKISLLGAPG*TSCCYL Trigger: TAGATAGCAGCAAGATGTCCAGCCTGGAGCCCCCAG...GAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | TTTGGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCCAGCCGTTTCTTGGATaGCCTCCCACCACTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FGQITVTRGRNVRTVSKIQPFLG*PPTTGW Trigger: CCAACCAGTGGTGGGAGGCCATCCAAGAAACGGCTG...GATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR TCA 90 bp | GTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGATCTCTCAAGAGGCCTGGCGGTaGACTGGTAAACTAGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: VTRGRNVRTVSKISLLISQEAWR*TGKLVH Trigger: ATGAACTAGTTTACCAGTTCACCGCCAGGCCTCTTG...AGAGATCAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR TCA 90 bp | ACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGATCACCACTTGGACTTGCTaGTTTCCATCCTCCAGGACT | + |
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Preference number: 4 (lower is better) Translates to: TVTRGRNVRTVSKISLLITTWTC*FPSSRT Trigger: AGTCCTGGAGGATGGAAATCAGCAAGTCCAAGTGGT...GATCAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | ACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGATCTTGTCGTCGAAGGCGTaGTCAAAACAGAAGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TVTRGRNVRTVSKISLLILSSKA*SKQKVW Trigger: CCAGACCTTCTGTTTTGACCACGCCTTCGACGACAA...GATCAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | GATGTAAATTCTCCAAGGGGACCTTTATGCTTAGATAATTTGGACAGATTACTGTCTTCCGGGTGGCCTTaGCAGTATCTGCTCCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: DVNSPRGPLCLDNLDRLLSSGWP*QYLLPF Trigger: AAAGGGGAGCAGATACTGCCAAGGCCACCCGGAAGA...CAGTAATCTGTCCAAATTATCTAAGCATAAAGGTCCCCTTGGAGAATTTACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR TCA 90 bp | GTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGATCTCTCTAGCAGACTTTTATTaGTCTCAGCCCCTTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: VTRGRNVRTVSKISLLISLADFY*SQPLPA Trigger: AGCTGGAAGGGGCTGAGATCAATAAAAGTCTGCTAG...AGAGATCAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR TCA 90 bp | TTTGGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCGTTGGACCTGCTCCATaGAGCTGCTGGCTCCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: FGQITVTRGRNVRTVSKIVGPAP*SCWLLF Trigger: AAAAAGGAGCCAGCAGCTTCATGGAGCAGGTCCAAC...GATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR GCA 90 bp | GTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGATCTCTCAAAGCAAGTTGCCATaGCCTTTCGGAAGATGGACT | + |
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Preference number: 4 (lower is better) Translates to: VTRGRNVRTVSKISLLISQSKLP*PFGRWT Trigger: AGTCCATCTTCCGAAAGGGCATGGCAACTTGCTTTG...AGAGATCAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR GCA 90 bp | GATGTAAATTCTCCAAGGGGACCTTTATGCTTAGATAATTTGGACAGATTACTGTGTGGGTTTTTCCACTaGCAGTCTGCCCGTAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: DVNSPRGPLCLDNLDRLLCGFFH*QSARRQ Trigger: TTGCCTACGGGCAGACTGGCAGTGGAAAAACCCACA...CAGTAATCTGTCCAAATTATCTAAGCATAAAGGTCCCCTTGGAGAATTTACATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | GATGTAAATTCTCCAAGGGGACCTTTATGCTTAGATAATTTGGACAGATTACTGCGTTTGTCACTGCGCTaGATTGCCACACAGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: DVNSPRGPLCLDNLDRLLRLSLR*IATQMP Trigger: TGGCATCTGTGTGGCAATCCAGCGCAGTGACAAACG...CAGTAATCTGTCCAAATTATCTAAGCATAAAGGTCCCCTTGGAGAATTTACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | TTTGGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCGCCTTGAGAATGAGCTaGAACACAGCATGGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: FGQITVTRGRNVRTVSKIALRMS*NTAWLL Trigger: CAGGAGCCATGCTGTGTTCCAGCTCATTCTCAAGGC...GATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | ATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGTACCTCATGGCCAGGTaGAGAGACACAGTGATGGTA | + |
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Preference number: 4 (lower is better) Translates to: ITVTRGRNVRTVSKISLLYLMAR*RDTVMV Trigger: TACCATCACTGTGTCTCTCCACCTGGCCATGAGGTA...CAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | TTTGGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCATCAGTGGTACCTCATaGCCAGGTGGAGAGACACAG | + |
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Preference number: 4 (lower is better) Translates to: FGQITVTRGRNVRTVSKIISGTS*PGGETQ Trigger: CTGTGTCTCTCCACCTGGCCATGAGGTACCACTGAT...GATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR TCA 90 bp | TTTGGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCCAACCCACTCTACTGTaGCCCAGGAGTTTTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: FGQITVTRGRNVRTVSKIQPTLL*PRSFLC Trigger: ACAGAGAAAACTCCTGGGTCACAGTAGAGTGGGTTG...GATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR GCA 90 bp | GATGTAAATTCTCCAAGGGGACCTTTATGCTTAGATAATTTGGACAGATTACTGGAATCCGTTTGTCACTaGGCTGGATTGCCACACAGA | + |
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Preference number: 4 (lower is better) Translates to: DVNSPRGPLCLDNLDRLLESVCH*AGLPHR Trigger: TCTGTGTGGCAATCCAGCGCAGTGACAAACGGATTC...CAGTAATCTGTCCAAATTATCTAAGCATAAAGGTCCCCTTGGAGAATTTACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR GCA 90 bp | ATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGTCATCAGACAAGGGTTaGTGGGGATCATCAGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: ITVTRGRNVRTVSKISLLSSDKG*WGSSGF Trigger: AAACCCTGATGATCCCCAGCAACCCTTGTCTGATGA...CAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR TCA 90 bp | CAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCATAACTTCATCCCTCTaGAGGGACTTTCCCGAATTC | + |
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Preference number: 4 (lower is better) Translates to: QITVTRGRNVRTVSKISLITSSL*RDFPEF Trigger: GAATTCGGGAAAGTCCCTTCAGAGGGATGAAGTTAT...GAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR GCA 90 bp | GATGTAAATTCTCCAAGGGGACCTTTATGCTTAGATAATTTGGACAGATTACTGCGGCGCTTCTCTCTCTaGTTCTGCAGCTTTTCAATT | + |
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Preference number: 4 (lower is better) Translates to: DVNSPRGPLCLDNLDRLLRRFSL*FCSFSI Trigger: AATTGAAAAGCTGCAGAAGCAGAGAGAGAAGCGCCG...CAGTAATCTGTCCAAATTATCTAAGCATAAAGGTCCCCTTGGAGAATTTACATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR GCA 90 bp | GATGTAAATTCTCCAAGGGGACCTTTATGCTTAGATAATTTGGACAGATTACTGGTAGGCAAAGCAAGTTaGCATGCCCTTTCGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: DVNSPRGPLCLDNLDRLLVGKAS*HALSED Trigger: ATCTTCCGAAAGGGCATGGCAACTTGCTTTGCCTAC...CAGTAATCTGTCCAAATTATCTAAGCATAAAGGTCCCCTTGGAGAATTTACATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR GCA 90 bp | GTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGATCTCTAGCACACCGATTTTCTaGTCCAAAACAGACAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: VTRGRNVRTVSKISLLISSTPIF*SKTDKD Trigger: GTCTTTGTCTGTTTTGGAGCAGAAAATCGGTGTGCT...AGAGATCAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | GATGTAAATTCTCCAAGGGGACCTTTATGCTTAGATAATTTGGACAGATTACTGACACAGATGCCAACCTaGAAGTCTGTGAAGTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: DVNSPRGPLCLDNLDRLLTQMPT*KSVKWD Trigger: ATCCCACTTCACAGACTTCCAGGTTGGCATCTGTGT...CAGTAATCTGTCCAAATTATCTAAGCATAAAGGTCCCCTTGGAGAATTTACATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | GGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCAGGTAAACTAGTTCATTaGATGCCTTGTCGTCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: GQITVTRGRNVRTVSKISGKLVH*MPCRRR Trigger: CCTTCGACGACAAGGCATCCAATGAACTAGTTTACC...TGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR TCA 90 bp | TTTGGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCGCTCTGAATGGGGTATaGGACTTGTTCTTACCCAAA | + |
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Preference number: 4 (lower is better) Translates to: FGQITVTRGRNVRTVSKIALNGV*DLFLPK Trigger: TTTGGGTAAGAACAAGTCTCATACCCCATTCAGAGC...GATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | GGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCATTTGCTGGCTCTGAATaGGGTATGAGACTTGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GQITVTRGRNVRTVSKISFAGSE*GMRLVL Trigger: AAGAACAAGTCTCATACCCCATTCAGAGCCAGCAAA...TGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR TCA 90 bp | ACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGATCCGTATCTTAAAGTATTaGGAGTATTCTCACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: TVTRGRNVRTVSKISLLIRILKY*EYSHRK Trigger: CTTCCTGTGAGAATACTCTCAATACTTTAAGATACG...GATCAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR TCA 90 bp | ACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGATCCTAAAGCTAATTCTTTaGCTCTGTTGGCGTATCTTA | + |
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Preference number: 4 (lower is better) Translates to: TVTRGRNVRTVSKISLLILKLIL*LCWRIL Trigger: TAAGATACGCCAACAGAGTCAAAGAATTAGCTTTAG...GATCAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR GCA 90 bp | GATGTAAATTCTCCAAGGGGACCTTTATGCTTAGATAATTTGGACAGATTACTGTTCTCTCTCTGCTTCTaGAGCTTTTCAATTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: DVNSPRGPLCLDNLDRLLFSLCF*SFSISR Trigger: ACGGGAAATTGAAAAGCTGCAGAAGCAGAGAGAGAA...CAGTAATCTGTCCAAATTATCTAAGCATAAAGGTCCCCTTGGAGAATTTACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | GATGTAAATTCTCCAAGGGGACCTTTATGCTTAGATAATTTGGACAGATTACTGTGGAAGTCTGTGAAGTaGGATTTCAGAGGTTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: DVNSPRGPLCLDNLDRLLWKSVK*DFRGLR Trigger: CCTTAAACCTCTGAAATCCCACTTCACAGACTTCCA...CAGTAATCTGTCCAAATTATCTAAGCATAAAGGTCCCCTTGGAGAATTTACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | ATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGTGTTTCATTTCTGTGTaGGATCATCGCAATCCACTT | + |
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Preference number: 4 (lower is better) Translates to: ITVTRGRNVRTVSKISLLCFISV*DHRNPL Trigger: AAGTGGATTGCGATGATCCCACACAGAAATGAAACA...CAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CCA 90 bp | CAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCACTTGGCTTTTCTTTTaGAGGTCTTCTCGTAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: QITVTRGRNVRTVSKISLTWLFF*RSSRSD Trigger: ATCACTACGAGAAGACCTCCAAAAGAAAAGCCAAGT...GAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR GCA 90 bp | TTTGGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCACAGATCGTACACTTTaGCACCATAGATCTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FGQITVTRGRNVRTVSKITDRTL*HHRSQK Trigger: TTTTTGAGATCTATGGTGGCAAAGTGTACGATCTGT...GATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS TCA 90 bp | TGGAACACAGCATGGCTCCTGGAGGAGTGGGCGTTGACCGAGGTCTaGCCGGAAGTCCGACAGCTGTTCCCGAGCTCCACCAGATTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WNTAWLLEEWALTEV*PEVRQLFPSSTRFR Trigger: CCTGAATCTGGTGGAGCTCGGGAACAGCTGTCGGACTTCCGGTCAGACCTCGGTCAACGCCCACTCCTCCAGGAGCCATGCTGTGTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CCA 90 bp | AGGGAAAACTTGCCGTGCAGCTTCCCTCCAGCCTTGAGAATGAGCTaGAACACAGCATGGCTCCTGGAGGAGTGGGCGTTGACCGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: RENLPCSFPPALRMS*NTAWLLEEWALTEV Trigger: GACCTCGGTCAACGCCCACTCCTCCAGGAGCCATGCTGTGTTCCAGCTCATTCTCAAGGCTGGAGGGAAGCTGCACGGCAAGTTTTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CCA 90 bp | CTGCGCTGGATTGCCACACAGATGCCAACCTGGAAGTCTGTGAAGTaGGATTTCAGAGGTTTAAGGGGTGAGAGGCGTGGGGCCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRWIATQMPTWKSVK*DFRGLRGERRGARG Trigger: TCCTCTGGCCCCACGCCTCTCACCCCTTAAACCTCTGAAATCCCACTTCACAGACTTCCAGGTTGGCATCTGTGTGGCAATCCAGCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS GCA 90 bp | GCTCCCCTTTCGTTCCCAGCTAAGTCAACCAGGGAAAACTTGCCGTaGAGCTTCCCTCCAGCCTTGAGAATGAGCTGGAACACAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: APLSFPAKSTRENLP*SFPPALRMSWNTAW Trigger: CCATGCTGTGTTCCAGCTCATTCTCAAGGCTGGAGGGAAGCTGCACGGCAAGTTTTCCCTGGTTGACTTAGCTGGGAACGAAAGGGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CCA 90 bp | TTCTCACACACACACAGATCCGGTGGTCTTCTGGGGGCTCCAGGCTaGACATCTTGCTGCTATCTAGACGCCTGCGATACTCCTCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: FSHTHRSGGLLGAPG*TSCCYLDACDTPQS Trigger: TGATTGAGGAGTATCGCAGGCGTCTAGATAGCAGCAAGATGTCCAGCCTGGAGCCCCCAGAAGACCACCGGATCTGTGTGTGTGTGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS TCA 90 bp | GTGACCCAGGAGTTTTCTCTGTTGATCTCTGTGACCACAGCCAGGTaGATCCGTTTGTCACTGCGCTGGATTGCCACACAGATGCCAACC | + |
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Preference number: 5 (lower is better) Translates to: VTQEFSLLISVTTAR*IRLSLRWIATQMPT Trigger: GGTTGGCATCTGTGTGGCAATCCAGCGCAGTGACAAACGGATTCACCTGGCTGTGGTCACAGAGATCAACAGAGAAAACTCCTGGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS TCA 90 bp | TTGCCATGCCCTTTCGGAAGATGGACTCCACAAGAGGCCTGGCGGTaGACTGGTAAACTAGTTCATTGGATGCCTTGTCGTCGAAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LPCPFGRWTPQEAWR*TGKLVHWMPCRRRR Trigger: ACGCCTTCGACGACAAGGCATCCAATGAACTAGTTTACCAGTTCACCGCCAGGCCTCTTGTGGAGTCCATCTTCCGAAAGGGCATGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS GCA 90 bp | CTCTGTGACCACAGCCAGGTGAATCCGTTTGTCACTGCGCTGGATTaGCACACAGATGCCAACCTGGAAGTCTGTGAAGTGGGATTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCDHSQVNPFVTALD*HTDANLEVCEVGFQ Trigger: CTGAAATCCCACTTCACAGACTTCCAGGTTGGCATCTGTGTGGCAATCCAGCGCAGTGACAAACGGATTCACCTGGCTGTGGTCACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CCA 90 bp | TCATTTCTGTGTGGGATCATCGCAATCCACTTGGTGGCTGTACGCTaGTCTCCAATGGCAGTAGATGGTACTACAGACACTGGGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFLCGIIAIHLVAVR*SPMAVDGTTDTGRR Trigger: CCTGCGCCCAGTGTCTGTAGTACCATCTACTGCCATTGGAGACCAGCGTACAGCCACCAAGTGGATTGCGATGATCCCACACAGAAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS TCA 90 bp | CCAAAACAGACAAAGACTGCGCAATGCAAAAATCCACATCACCGTTaGCTCCCTCAGCCGTTTCTTGGATGGCCTCCCACCACTGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PKQTKTAQCKNPHHR*LPQPFLGWPPTTGW Trigger: CCAACCAGTGGTGGGAGGCCATCCAAGAAACGGCTGAGGGAGTCAACGGTGATGTGGATTTTTGCATTGCGCAGTCTTTGTCTGTTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS TCA 90 bp | GAGGGAATAGTGATGATATCGAGGTCCTTCATCGTCGTCTCTCTCTaGTTAAGAGGGCGCTTTCTCACACACACACAGATCCGGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EGIVMISRSFIVVSL*LRGRFLTHTQIRWS Trigger: AGACCACCGGATCTGTGTGTGTGTGAGAAAGCGCCCTCTTAATCAGAGAGAGACGACGATGAAGGACCTCGATATCATCACTATTCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CCA 90 bp | CTGAAGGGACTTTCCCGAATTCGTATTGTCGTTTTCTATCATCAGTaGTACCTCATGGCCAGGTGGAGAGACACAGTGATGGTAGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LKGLSRIRIVVFYHQ*YLMARWRDTVMVGP Trigger: AGGCCCTACCATCACTGTGTCTCTCCACCTGGCCATGAGGTACCACTGATGATAGAAAACGACAATACGAATTCGGGAAAGTCCCTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CAA 90 bp | ACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGATCCTCTTCCGGGTGGCCTaGGCAGTATCTGCTCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: TVTRGRNVRTVSKISLLILFRVA*AVSAPL Trigger: AAGGGGAGCAGATACTGCCAAGGCCACCCGGAAGAG...GATCAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS GCA 90 bp | GTCAGGTCCACCTTTTGTTTAGACTCGTGGACCATGACTACATTGTaGGAGGGAATAGTGATGATATCGAGGTCCTTCATCGTCGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: VRSTFCLDSWTMTTL*EGIVMISRSFIVVS Trigger: AGAGACGACGATGAAGGACCTCGATATCATCACTATTCCCTCGCACAATGTAGTCATGGTCCACGAGTCTAAACAAAAGGTGGACCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CAA 90 bp | GGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACCCCACCACTTGGACTaGCTGATTTCCATCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQITVTRGRNVRTVSKISPHHLD*LISILQ Trigger: CTGGAGGATGGAAATCAGCAAGTCCAAGTGGTGGGG...TGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CAA 90 bp | ATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGCTGCAGCCCCACCACTaGGACTTGCTGATTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: ITVTRGRNVRTVSKISLLLQPHH*DLLISI Trigger: GATGGAAATCAGCAAGTCCAAGTGGTGGGGCTGCAG...CAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CAA 90 bp | ATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGAGCTTCCCTCCAGCCTaGAGAATGAGCTGGAACACA | + |
|
Preference number: 5 (lower is better) Translates to: ITVTRGRNVRTVSKISLLSFPPA*RMSWNT Trigger: TGTGTTCCAGCTCATTCTCAAGGCTGGAGGGAAGCT...CAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CAA 90 bp | GATGTAAATTCTCCAAGGGGACCTTTATGCTTAGATAATTTGGACAGATTACTGTCAACCAGGGAAAACTaGCCGTGCAGCTTCCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DVNSPRGPLCLDNLDRLLSTREN*PCSFPP Trigger: TGGAGGGAAGCTGCACGGCAAGTTTTCCCTGGTTGA...CAGTAATCTGTCCAAATTATCTAAGCATAAAGGTCCCCTTGGAGAATTTACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CAA 90 bp | TTTGGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCAGCACCTGCGTGAGTTaGCTGGCTCTGAATGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FGQITVTRGRNVRTVSKISTCVS*LALNGV Trigger: TACCCCATTCAGAGCCAGCAAACTCACGCAGGTGCT...GATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CAA 90 bp | GTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGATCTCTAAATCCACATCACCGTaGACTCCCTCAGCCGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VTRGRNVRTVSKISLLISKSTSP*TPSAVS Trigger: AGAAACGGCTGAGGGAGTCAACGGTGATGTGGATTT...AGAGATCAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CAA 90 bp | CAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCAGGAGTTTTCTCTGTaGATCTCTGTGACCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QITVTRGRNVRTVSKISLQEFSL*ISVTTA Trigger: GGCTGTGGTCACAGAGATCAACAGAGAAAACTCCTG...GAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CAA 90 bp | TTTGGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCATCATCGCAATCCACTaGGTGGCTGTACGCTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: FGQITVTRGRNVRTVSKIIIAIH*VAVRWS Trigger: AGACCAGCGTACAGCCACCAAGTGGATTGCGATGAT...GATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CAA 90 bp | CAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCTTCATCAGACAAGGGTaGCTGGGGATCATCAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QITVTRGRNVRTVSKISLFIRQG*LGIIRV Trigger: AACCCTGATGATCCCCAGCAACCCTTGTCTGATGAA...GAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CAA 90 bp | GGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCAGGTCAGGTCCACCTTTaGTTTAGACTCGTGGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: GQITVTRGRNVRTVSKISGQVHL*FRLVDH Trigger: ATGGTCCACGAGTCTAAACAAAAGGTGGACCTGACC...TGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CAA 90 bp | GATGTAAATTCTCCAAGGGGACCTTTATGCTTAGATAATTTGGACAGATTACTGCGTAGGCAAAGCAAGTaGCCATGCCCTTTCGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: DVNSPRGPLCLDNLDRLLRRQSK*PCPFGR Trigger: TCTTCCGAAAGGGCATGGCAACTTGCTTTGCCTACG...CAGTAATCTGTCCAAATTATCTAAGCATAAAGGTCCCCTTGGAGAATTTACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CAA 90 bp | ATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCCTGGCTAGCAGACTTTTATaGATCTCAGCCCCTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ITVTRGRNVRTVSKISLLASRLL*ISAPSS Trigger: GCTGGAAGGGGCTGAGATCAATAAAAGTCTGCTAGC...CAGGAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CAA 90 bp | CAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCTCACTCTCTAAAGCTAATTCTTaGACTCTGTTGGCGTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: QITVTRGRNVRTVSKISLSKANS*TLLAYL Trigger: AAGATACGCCAACAGAGTCAAAGAATTAGCTTTAGA...GAGTGAGATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS-3UTR CAA 90 bp | TTTGGACAGATTACTGTAACAAGAGGTAGAAATGTCAGAACTGTATCCAAGATCGCGTATCTTAAAGTATaGAGAGTATTCTCACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FGQITVTRGRNVRTVSKIAYLKV*RVFSQE Trigger: TTCCTGTGAGAATACTCTCAATACTTTAAGATACGC...GATCTTGGATACAGTTCTGACATTTCTACCTCTTGTTACAGTAATCTGTCCAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS TCA 72 bp | GCATGGCTCCTGGAGGAGTGGGCGTTGACCGAGGTCTaGCCGGAAGTCCGACAGCTGTTCCCGAGCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: AWLLEEWALTEV*PEVRQLFPSST Trigger: GGTGGAGCTCGGGAACAGCTGTCGGACTTCCGGTCAGACCTCGGTCAACGCCCACTCCTCCAGGAGCCATGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS TCA 72 bp | GCTGGAACACAGCATGGCTCCTGGAGGAGTGGGCGTTaGCCGAGGTCTGACCGGAAGTCCGACAGCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGTQHGSWRSGR*PRSDRKSDSCS Trigger: GGAACAGCTGTCGGACTTCCGGTCAGACCTCGGTCAACGCCCACTCCTCCAGGAGCCATGCTGTGTTCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS GCA 72 bp | CGGATCTCTAGCTGCAGTCGGCGGCGCTTCTCTCTCTaGTTCTGCAGCTTTTCAATTTCCCGTAGGCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RISSCSRRRFSL*FCSFSISRRQG Trigger: CCCCTGCCTACGGGAAATTGAAAAGCTGCAGAAGCAGAGAGAGAAGCGCCGCCGACTGCAGCTAGAGATCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS GCA 72 bp | TTGATGTCAAGGGCTCGTCTAGCTCGGATCTCTAGCTaGAGTCGGCGGCGCTTCTCTCTCTGCTTCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LMSRARLARISS*SRRRFSLCFCS Trigger: GCTGCAGAAGCAGAGAGAGAAGCGCCGCCGACTGCAGCTAGAGATCCGAGCTAGACGAGCCCTTGACATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS GCA 72 bp | GGTGGTCTTCTGGGGGCTCCAGGCTGGACATCTTGCTaGTATCTAGACGCCTGCGATACTCCTCAATCATGC | + |
|
Preference number: 6 (lower is better) Translates to: GGLLGAPGWTSC*YLDACDTPQSC Trigger: GCATGATTGAGGAGTATCGCAGGCGTCTAGATAGCAGCAAGATGTCCAGCCTGGAGCCCCCAGAAGACCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS GCA 72 bp | TCCGGTGGTCTTCTGGGGGCTCCAGGCTGGACATCTTaGTGCTATCTAGACGCCTGCGATACTCCTCAATCA | + |
|
Preference number: 6 (lower is better) Translates to: SGGLLGAPGWTS*CYLDACDTPQS Trigger: TGATTGAGGAGTATCGCAGGCGTCTAGATAGCAGCAAGATGTCCAGCCTGGAGCCCCCAGAAGACCACCGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CCA 72 bp | ACACACAGATCCGGTGGTCTTCTGGGGGCTCCAGGCTaGACATCTTGCTGCTATCTAGACGCCTGCGATACT | + |
|
Preference number: 6 (lower is better) Translates to: THRSGGLLGAPG*TSCCYLDACDT Trigger: AGTATCGCAGGCGTCTAGATAGCAGCAAGATGTCCAGCCTGGAGCCCCCAGAAGACCACCGGATCTGTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 72 bp | ATCCGGTGGTCTTCTGGGGGCTCCAGGCTGGACATCTaGCTGCTATCTAGACGCCTGCGATACTCCTCAATC | + |
|
Preference number: 6 (lower is better) Translates to: IRWSSGGSRLDI*LLSRRLRYSSI Trigger: GATTGAGGAGTATCGCAGGCGTCTAGATAGCAGCAAGATGTCCAGCCTGGAGCCCCCAGAAGACCACCGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 90 bp | CACACACAGATCCGGTGGTCTTCTGGGGGCTCCAGGCTGGACATCTaGCTGCTATCTAGACGCCTGCGATACTCCTCAATCATGCGCATA | + |
|
Preference number: 6 (lower is better) Translates to: HTQIRWSSGGSRLDI*LLSRRLRYSSIMRI Trigger: TATGCGCATGATTGAGGAGTATCGCAGGCGTCTAGATAGCAGCAAGATGTCCAGCCTGGAGCCCCCAGAAGACCACCGGATCTGTGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 72 bp | CCCCTTTCGTTCCCAGCTAAGTCAACCAGGGAAAACTaGCCGTGCAGCTTCCCTCCAGCCTTGAGAATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLSFPAKSTREN*PCSFPPALRMS Trigger: GCTCATTCTCAAGGCTGGAGGGAAGCTGCACGGCAAGTTTTCCCTGGTTGACTTAGCTGGGAACGAAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS GCA 72 bp | CACAGCCAGGTGAATCCGTTTGTCACTGCGCTGGATTaGCACACAGATGCCAACCTGGAAGTCTGTGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HSQVNPFVTALD*HTDANLEVCEV Trigger: CACTTCACAGACTTCCAGGTTGGCATCTGTGTGGCAATCCAGCGCAGTGACAAACGGATTCACCTGGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS GCA 72 bp | TCTAGCTGCAGTCGGCGGCGCTTCTCTCTCTGCTTCTaGAGCTTTTCAATTTCCCGTAGGCAGGGGGATTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSCSRRRFSLCF*SFSISRRQGDF Trigger: AAAATCCCCCTGCCTACGGGAAATTGAAAAGCTGCAGAAGCAGAGAGAGAAGCGCCGCCGACTGCAGCTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 90 bp | GTATCTGCTCCCCTTTCGTTCCCAGCTAAGTCAACCAGGGAAAACTaGCCGTGCAGCTTCCCTCCAGCCTTGAGAATGAGCTGGAACACA | + |
|
Preference number: 6 (lower is better) Translates to: VSAPLSFPAKSTREN*PCSFPPALRMSWNT Trigger: TGTGTTCCAGCTCATTCTCAAGGCTGGAGGGAAGCTGCACGGCAAGTTTTCCCTGGTTGACTTAGCTGGGAACGAAAGGGGAGCAGATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS TCA 72 bp | ACAAAGACTGCGCAATGCAAAAATCCACATCACCGTTaGCTCCCTCAGCCGTTTCTTGGATGGCCTCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: TKTAQCKNPHHR*LPQPFLGWPPT Trigger: GGTGGGAGGCCATCCAAGAAACGGCTGAGGGAGTCAACGGTGATGTGGATTTTTGCATTGCGCAGTCTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CCA 72 bp | ATTGCCACACAGATGCCAACCTGGAAGTCTGTGAAGTaGGATTTCAGAGGTTTAAGGGGTGAGAGGCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: IATQMPTWKSVK*DFRGLRGERRG Trigger: CCCACGCCTCTCACCCCTTAAACCTCTGAAATCCCACTTCACAGACTTCCAGGTTGGCATCTGTGTGGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 72 bp | GACAAAGACTGCGCAATGCAAAAATCCACATCACCGTaGACTCCCTCAGCCGTTTCTTGGATGGCCTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: DKDCAMQKSTSP*TPSAVSWMASH Trigger: GTGGGAGGCCATCCAAGAAACGGCTGAGGGAGTCAACGGTGATGTGGATTTTTGCATTGCGCAGTCTTTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 90 bp | TCCCCTGAGGGTGTTTCATTTCTGTGTGGGATCATCGCAATCCACTaGGTGGCTGTACGCTGGTCTCCAATGGCAGTAGATGGTACTACA | + |
|
Preference number: 6 (lower is better) Translates to: SPEGVSFLCGIIAIH*VAVRWSPMAVDGTT Trigger: TGTAGTACCATCTACTGCCATTGGAGACCAGCGTACAGCCACCAAGTGGATTGCGATGATCCCACACAGAAATGAAACACCCTCAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 90 bp | TACTCCTCAATCATGCGCATAGTCTCGAAGTTCGGATTTCCAGTGTaGATGTCAAGGGCTCGTCTAGCTCGGATCTCTAGCTGCAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: YSSIMRIVSKFGFPV*MSRARLARISSCSR Trigger: CCGACTGCAGCTAGAGATCCGAGCTAGACGAGCCCTTGACATCAACACTGGAAATCCGAACTTCGAGACTATGCGCATGATTGAGGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 90 bp | TCCAAAACAGACAAAGACTGCGCAATGCAAAAATCCACATCACCGTaGACTCCCTCAGCCGTTTCTTGGATGGCCTCCCACCACTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SKTDKDCAMQKSTSP*TPSAVSWMASHHWL Trigger: CAACCAGTGGTGGGAGGCCATCCAAGAAACGGCTGAGGGAGTCAACGGTGATGTGGATTTTTGCATTGCGCAGTCTTTGTCTGTTTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS TCA 72 bp | GAGTTTTCTCTGTTGATCTCTGTGACCACAGCCAGGTaGATCCGTTTGTCACTGCGCTGGATTGCCACACAG | + |
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Preference number: 6 (lower is better) Translates to: EFSLLISVTTAR*IRLSLRWIATQ Trigger: CTGTGTGGCAATCCAGCGCAGTGACAAACGGATTCACCTGGCTGTGGTCACAGAGATCAACAGAGAAAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS TCA 72 bp | CCTTTCGGAAGATGGACTCCACAAGAGGCCTGGCGGTaGACTGGTAAACTAGTTCATTGGATGCCTTGTCGT | + |
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Preference number: 6 (lower is better) Translates to: PFGRWTPQEAWR*TGKLVHWMPCR Trigger: ACGACAAGGCATCCAATGAACTAGTTTACCAGTTCACCGCCAGGCCTCTTGTGGAGTCCATCTTCCGAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CCA 72 bp | TGTGGGATCATCGCAATCCACTTGGTGGCTGTACGCTaGTCTCCAATGGCAGTAGATGGTACTACAGACACT | + |
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Preference number: 6 (lower is better) Translates to: CGIIAIHLVAVR*SPMAVDGTTDT Trigger: AGTGTCTGTAGTACCATCTACTGCCATTGGAGACCAGCGTACAGCCACCAAGTGGATTGCGATGATCCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 90 bp | CGGGTCAGGTCCACCTTTTGTTTAGACTCGTGGACCATGACTACATaGTGCGAGGGAATAGTGATGATATCGAGGTCCTTCATCGTCGTC | + |
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Preference number: 6 (lower is better) Translates to: RVRSTFCLDSWTMTT*CEGIVMISRSFIVV Trigger: GACGACGATGAAGGACCTCGATATCATCACTATTCCCTCGCACAATGTAGTCATGGTCCACGAGTCTAAACAAAAGGTGGACCTGACCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CCA 72 bp | TTGTCACTGCGCTGGATTGCCACACAGATGCCAACCTaGAAGTCTGTGAAGTGGGATTTCAGAGGTTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: LSLRWIATQMPT*KSVKWDFRGLR Trigger: CCTTAAACCTCTGAAATCCCACTTCACAGACTTCCAGGTTGGCATCTGTGTGGCAATCCAGCGCAGTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 72 bp | GGTGTTTCATTTCTGTGTGGGATCATCGCAATCCACTaGGTGGCTGTACGCTGGTCTCCAATGGCAGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: GVSFLCGIIAIH*VAVRWSPMAVD Trigger: ATCTACTGCCATTGGAGACCAGCGTACAGCCACCAAGTGGATTGCGATGATCCCACACAGAAATGAAACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 72 bp | ATCATGCGCATAGTCTCGAAGTTCGGATTTCCAGTGTaGATGTCAAGGGCTCGTCTAGCTCGGATCTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: IMRIVSKFGFPV*MSRARLARISS Trigger: GCTAGAGATCCGAGCTAGACGAGCCCTTGACATCAACACTGGAAATCCGAACTTCGAGACTATGCGCATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 72 bp | GGTCTGGTTTTCCAAGTAGCGGGTCAGGTCCACCTTTaGTTTAGACTCGTGGACCATGACTACATTGTGCGA | + |
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Preference number: 6 (lower is better) Translates to: GLVFQVAGQVHL*FRLVDHDYIVR Trigger: TCGCACAATGTAGTCATGGTCCACGAGTCTAAACAAAAGGTGGACCTGACCCGCTACTTGGAAAACCAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS TCA 72 bp | GTGATGATATCGAGGTCCTTCATCGTCGTCTCTCTCTaGTTAAGAGGGCGCTTTCTCACACACACACAGATC | + |
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Preference number: 6 (lower is better) Translates to: VMISRSFIVVSL*LRGRFLTHTQI Trigger: GATCTGTGTGTGTGTGAGAAAGCGCCCTCTTAATCAGAGAGAGACGACGATGAAGGACCTCGATATCATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 90 bp | AAAACAGAAGGTCTGGTTTTCCAAGTAGCGGGTCAGGTCCACCTTTaGTTTAGACTCGTGGACCATGACTACATTGTGCGAGGGAATAGT | + |
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Preference number: 6 (lower is better) Translates to: KTEGLVFQVAGQVHL*FRLVDHDYIVRGNS Trigger: ACTATTCCCTCGCACAATGTAGTCATGGTCCACGAGTCTAAACAAAAGGTGGACCTGACCCGCTACTTGGAAAACCAGACCTTCTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CCA 72 bp | CTTTCCCGAATTCGTATTGTCGTTTTCTATCATCAGTaGTACCTCATGGCCAGGTGGAGAGACACAGTGATG | + |
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Preference number: 6 (lower is better) Translates to: LSRIRIVVFYHQ*YLMARWRDTVM Trigger: CATCACTGTGTCTCTCCACCTGGCCATGAGGTACCACTGATGATAGAAAACGACAATACGAATTCGGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 72 bp | TCCACCTTTTGTTTAGACTCGTGGACCATGACTACATaGTGCGAGGGAATAGTGATGATATCGAGGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: STFCLDSWTMTT*CEGIVMISRSF Trigger: GAAGGACCTCGATATCATCACTATTCCCTCGCACAATGTAGTCATGGTCCACGAGTCTAAACAAAAGGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 90 bp | GCCTCTAAAGCTAATTCTTTGACTCTGTTGGCGTATCTTAAAGTATaGAGAGTATTCTCACAGGAAGTCATCCCGGGTGAGATTGTCGCG | + |
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Preference number: 6 (lower is better) Translates to: ASKANSLTLLAYLKV*RVFSQEVIPGEIVA Trigger: CGCGACAATCTCACCCGGGATGACTTCCTGTGAGAATACTCTCAATACTTTAAGATACGCCAACAGAGTCAAAGAATTAGCTTTAGAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS GCA 72 bp | ACCTTTTGTTTAGACTCGTGGACCATGACTACATTGTaGGAGGGAATAGTGATGATATCGAGGTCCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: TFCLDSWTMTTL*EGIVMISRSFI Trigger: GATGAAGGACCTCGATATCATCACTATTCCCTCGCACAATGTAGTCATGGTCCACGAGTCTAAACAAAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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| CDS CAA 72 bp | GCTAATTCTTTGACTCTGTTGGCGTATCTTAAAGTATaGAGAGTATTCTCACAGGAAGTCATCCCGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: ANSLTLLAYLKV*RVFSQEVIPGE Trigger: CTCACCCGGGATGACTTCCTGTGAGAATACTCTCAATACTTTAAGATACGCCAACAGAGTCAAAGAATTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061019.6 |
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