RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF26B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026494

Ensembl transcript IDs: ENSMUST00000160789.2, ENSMUST00000161017.8

Found 911 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCATCCTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTTaGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTG +
Preference number: 1 (lower is better)
Translates to: FILILLSWVLPAQRA*EGGVLLKSWGREGL
Trigger: CAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAGGATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR GCA 90 bp CCATCACCTGTCCTTCCAAACCTCCCTGGGAAACACACCGGCTCATaGCAACGCGGTTTCCACGGTCTGAGTGGCCTTACCAGAAGAGCC +
Preference number: 1 (lower is better)
Translates to: PSPVLPNLPGKHTGS*QRGFHGLSGLTRRA
Trigger: GGCTCTTCTGGTAAGGCCACTCAGACCGTGGAAACCGCGTTGGCATGAGCCGGTGTGTTTCCCAGGGAGGTTTGGAAGGACAGGTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 90 bp TTGCTGTTAAGCAGGTCCATGCACACATGTGTTATGAGGCTGAGGTaGGCCCTGAGCCCAGGACTCCTGCCGAATGGCACTGGGAGGAGC +
Preference number: 1 (lower is better)
Translates to: LLLSRSMHTCVMRLR*ALSPGLLPNGTGRS
Trigger: GCTCCTCCCAGTGCCATTCGGCAGGAGTCCTGGGCTCAGGGCCCACCTCAGCCTCATAACACATGTGTGCATGGACCTGCTTAACAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 90 bp ATCAGGGACACTCCAGGTGGCGGGGCTCATGTCCCAGTTCTGCTGTaGGACTGTGAACCTGGCCAGGCAGTGAGTACGGATGTCAACTTC +
Preference number: 1 (lower is better)
Translates to: IRDTPGGGAHVPVLL*DCEPGQAVSTDVNF
Trigger: GAAGTTGACATCCGTACTCACTGCCTGGCCAGGTTCACAGTCTCACAGCAGAACTGGGACATGAGCCCCGCCACCTGGAGTGTCCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 90 bp CTCACTCCAGACTTGCTACCAACCTTCATCCTCATCCTGTTGTCTTaGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCCTGCTG +
Preference number: 1 (lower is better)
Translates to: LTPDLLPTFILILLS*VLPAQRAWEGGVLL
Trigger: CAGCAGGACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CCA 90 bp CCTATTCCATGCCCAACCCTGGGTCTGCCAGCTGACCTGCCGCTTTaGAAGATAGTCTCTCCCATCACCTGTCCTTCCAAACCTCCCTGG +
Preference number: 1 (lower is better)
Translates to: PIPCPTLGLPADLPL*KIVSPITCPSKPPW
Trigger: CCAGGGAGGTTTGGAAGGACAGGTGATGGGAGAGACTATCTTCCAAAGCGGCAGGTCAGCTGGCAGACCCAGGGTTGGGCATGGAATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 90 bp ACAGAGATGGGGAGAGGAAGAAGATGGTGGAGCAGGCAGTGGCCATaGACCAGAATCAGGTGGCCAGGAGAGACAGCAAGTATCAAGGGG +
Preference number: 1 (lower is better)
Translates to: TEMGRGRRWWSRQWP*TRIRWPGETASIKG
Trigger: CCCCTTGATACTTGCTGTCTCTCCTGGCCACCTGATTCTGGTCCATGGCCACTGCCTGCTCCACCATCTTCTTCCTCTCCCCATCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 90 bp CTGTGCCCTGCTCTGTATCAAGGATCAGGTGCCACAGCACTCACATaGCTCCTGTGTGATGAGTTCTGCTGGCCATGCATCGTGCTGTGC +
Preference number: 1 (lower is better)
Translates to: LCPALYQGSGATALT*LLCDEFCWPCIVLC
Trigger: GCACAGCACGATGCATGGCCAGCAGAACTCATCACACAGGAGTCATGTGAGTGCTGTGGCACCTGATCCTTGATACAGAGCAGGGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 90 bp AAGGTGGCAGGGACAAGCCATGGAGGCTTTAGGACAGGGGAGAGTTaGCCTCTTGCTACTGGACAGGACACTGGATGGCAGAAAACGATG +
Preference number: 1 (lower is better)
Translates to: KVAGTSHGGFRTGES*PLATGQDTGWQKTM
Trigger: CATCGTTTTCTGCCATCCAGTGTCCTGTCCAGTAGCAAGAGGCCAACTCTCCCCTGTCCTAAAGCCTCCATGGCTTGTCCCTGCCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 90 bp GGAAGAAGATGGTGGAGCAGGCAGTGGCCATGGACCAGAATCAGGTaGCCAGGAGAGACAGCAAGTATCAAGGGGTCTTATAGCCGGAGA +
Preference number: 1 (lower is better)
Translates to: GRRWWSRQWPWTRIR*PGETASIKGSYSRR
Trigger: TCTCCGGCTATAAGACCCCTTGATACTTGCTGTCTCTCCTGGCCACCTGATTCTGGTCCATGGCCACTGCCTGCTCCACCATCTTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 90 bp AAGCTCATGTGTACCTATTCCATGCCCAACCCTGGGTCTGCCAGCTaGCCTGCCGCTTTGGAAGATAGTCTCTCCCATCACCTGTCCTTC +
Preference number: 1 (lower is better)
Translates to: KLMCTYSMPNPGSAS*PAALEDSLSHHLSF
Trigger: GAAGGACAGGTGATGGGAGAGACTATCTTCCAAAGCGGCAGGTCAGCTGGCAGACCCAGGGTTGGGCATGGAATAGGTACACATGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 90 bp TGTCTCAGTCCCTTTGGCTGCCTGCTGAGATTCAGAGCAAAGCTCTaGACTTTGAGGCTGATATCCCACCCCTGGCTGTATCCATCACCC +
Preference number: 1 (lower is better)
Translates to: CLSPFGCLLRFRAKL*TLRLISHPWLYPSP
Trigger: GGGTGATGGATACAGCCAGGGGTGGGATATCAGCCTCAAAGTGCAGAGCTTTGCTCTGAATCTCAGCAGGCAGCCAAAGGGACTGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 90 bp GTGAGCCCAGAGAGTCGAAATGTAGACAGCCCCACTTTGCATCAGTaGTGCCACAGTAAACAAAGAAATGGGACTCGGCTGCGGTTGCCC +
Preference number: 1 (lower is better)
Translates to: VSPESRNVDSPTLHQ*CHSKQRNGTRLRLP
Trigger: GGGCAACCGCAGCCGAGTCCCATTTCTTTGTTTACTGTGGCATCACTGATGCAAAGTGGGGCTGTCTACATTTCGACTCTCTGGGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 90 bp CCCAGGACTCCTGCCGAATGGCACTGGGAGGAGCTGGAGAAGATCTaGGAAGGCTCTGCTTCTCTAGGAGACACACTTGTTAAAGCTACA +
Preference number: 1 (lower is better)
Translates to: PRTPAEWHWEELEKI*EGSASLGDTLVKAT
Trigger: TGTAGCTTTAACAAGTGTGTCTCCTAGAGAAGCAGAGCCTTCTCAGATCTTCTCCAGCTCCTCCCAGTGCCATTCGGCAGGAGTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 90 bp AGCCACCTCACACTGGCACCATCATCAGACACCAGGACTACGTCTTaGCACCTAGAGAGTTGTACTCCCATAGGCATCTCAGAGATAGGG +
Preference number: 1 (lower is better)
Translates to: SHLTLAPSSDTRTTS*HLESCTPIGISEIG
Trigger: CCCTATCTCTGAGATGCCTATGGGAGTACAACTCTCTAGGTGCCAAGACGTAGTCCTGGTGTCTGATGATGGTGCCAGTGTGAGGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 90 bp CCCAGAGCCACACATGTGTTAGCACTAAGCACACCCCTTTCAATGTaGAAATCAGGGCCAAATCTAGGCAGTGGCAGGAAGGCAGGAAGG +
Preference number: 1 (lower is better)
Translates to: PRATHVLALSTPLSM*KSGPNLGSGRKAGR
Trigger: CCTTCCTGCCTTCCTGCCACTGCCTAGATTTGGCCCTGATTTCCACATTGAAAGGGGTGTGCTTAGTGCTAACACATGTGTGGCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 90 bp AATGTCTCCTTAAGTCAAGCCTGGCAGTGTAGGAGGCTGGCGGTGTaGGGAATGGATGCAGGAGACTCCTTTGGGCAAGGTCATTCTAAG +
Preference number: 1 (lower is better)
Translates to: NVSLSQAWQCRRLAV*GMDAGDSFGQGHSK
Trigger: CTTAGAATGACCTTGCCCAAAGGAGTCTCCTGCATCCATTCCCCACACCGCCAGCCTCCTACACTGCCAGGCTTGACTTAAGGAGACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 90 bp TTGGCCCTCCTGCAATGCTCAGTTGTTCCAGAGGCCTGTAGACAATaGCTGACCATTCCATGCTTCAGTCCTATCTCCCTAACATGGTCC +
Preference number: 1 (lower is better)
Translates to: LALLQCSVVPEACRQ*LTIPCFSPISLTWS
Trigger: GGACCATGTTAGGGAGATAGGACTGAAGCATGGAATGGTCAGGCATTGTCTACAGGCCTCTGGAACAACTGAGCATTGCAGGAGGGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 90 bp AGGCTGACTTCTAAAACAGTCAAGCCGATGGCCTCATCTGTGCCCTaGTCTGTATCAAGGATCAGGTGCCACAGCACTCACATGACTCCT +
Preference number: 1 (lower is better)
Translates to: RLTSKTVKPMASSVP*SVSRIRCHSTHMTP
Trigger: AGGAGTCATGTGAGTGCTGTGGCACCTGATCCTTGATACAGAGCAGGGCACAGATGAGGCCATCGGCTTGACTGTTTTAGAAGTCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 90 bp CACAGGGCAGATGCTTTTCTTGCTCAAAGTTTGGATGGAACTCCCTaGAGCAAGCACAACCTGAGTGTTAGGTCCCTTGGGAGCACTTCC +
Preference number: 1 (lower is better)
Translates to: HRADAFLAQSLDGTP*SKHNLSVRSLGSTS
Trigger: GGAAGTGCTCCCAAGGGACCTAACACTCAGGTTGTGCTTGCTGCAGGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 90 bp CCGAAGACCAGAGAAGGTGGCTGTTCCTCAAGGATGTGGGATCCATaGCCACAGGGCAGATGCTTTTCTTGCTCAAAGTTTGGATGGAAC +
Preference number: 1 (lower is better)
Translates to: PKTREGGCSSRMWDP*PQGRCFSCSKFGWN
Trigger: GTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGATCCCACATCCTTGAGGAACAGCCACCTTCTCTGGTCTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 90 bp CACGAGACTCCGAAGACCAGAGAAGGTGGCTGTTCCTCAAGGATGTaGGATCCATGCCCACAGGGCAGATGCTTTTCTTGCTCAAAGTTT +
Preference number: 1 (lower is better)
Translates to: HETPKTREGGCSSRM*DPCPQGRCFSCSKF
Trigger: AAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGATCCCACATCCTTGAGGAACAGCCACCTTCTCTGGTCTTCGGAGTCTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 90 bp AAAGGCCCGGGGAACCTGATTTCCAAGTTGATTGCCATGCCAACTTaGAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTGCCTGCTGAGA +
Preference number: 1 (lower is better)
Translates to: KGPGNLISKLIAMPT*KEELCLSPFGCLLR
Trigger: TCTCAGCAGGCAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGCATGGCAATCAACTTGGAAATCAGGTTCCCCGGGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 90 bp CAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTaGTACCAACCTTCATCCTCATCCTGTTGTCTTGGGTGTTGCCAG +
Preference number: 1 (lower is better)
Translates to: QTKETSPFAPRSLQT*YQPSSSSCCLGCCQ
Trigger: CTGGCAACACCCAAGACAACAGGATGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR GCA 90 bp TTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTaGTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCAC +
Preference number: 1 (lower is better)
Translates to: FASGPMYRVLQGSSK*FLSPTGLPIISSFH
Trigger: GTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGCACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR GCA 90 bp AAACATTCACTTCGGGCTCAGCTACAGATCGGCAAAGGCCATGTTTaGACTGAGCAAATTGTGGGCTCCTGCCAACCTCACCTTCTTTAC +
Preference number: 1 (lower is better)
Translates to: KHSLRAQLQIGKGHV*TEQIVGSCQPHLLY
Trigger: GTAAAGAAGGTGAGGTTGGCAGGAGCCCACAATTTGCTCAGTGCAAACATGGCCTTTGCCGATCTGTAGCTGAGCCCGAAGTGAATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 90 bp AGCATTCTGAGGTTACAAATCAATAATGTCTCCTTAAGTCAAGCCTaGCAGTGTAGGAGGCTGGCGGTGTGGGGAATGGATGCAGGAGAC +
Preference number: 1 (lower is better)
Translates to: SILRLQINNVSLSQA*QCRRLAVWGMDAGD
Trigger: GTCTCCTGCATCCATTCCCCACACCGCCAGCCTCCTACACTGCCAGGCTTGACTTAAGGAGACATTATTGATTTGTAACCTCAGAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 90 bp TTGTTAGGAAGGCAAAGGCCCGGGGAACCTGATTTCCAAGTTGATTaGCATGCCAACTTGAAAGGAAGAGCTTTGTCTCAGTCCCTTTGG +
Preference number: 1 (lower is better)
Translates to: LLGRQRPGEPDFQVD*HANLKGRALSQSLW
Trigger: CCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGCATGGCAATCAACTTGGAAATCAGGTTCCCCGGGCCTTTGCCTTCCTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 90 bp TCATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATaGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAG +
Preference number: 1 (lower is better)
Translates to: SFPPSTCWCLYLSFL*QTKETSPFAPRSLQ
Trigger: CTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CCA 90 bp TTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTaGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGGAAACATCG +
Preference number: 1 (lower is better)
Translates to: FSVPRGFPSFPPSTC*CLYLSFLWQTKETS
Trigger: CGATGTTTCCTTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CCA 90 bp GGATTGGAGTGCTCACTTTCACATGACACCAGTAATTGTTGTGTGTaGAGAATATTCAGCTTCGCCCCTCCCACAGTGTCACACTATGTC +
Preference number: 1 (lower is better)
Translates to: GLECSLSHDTSNCCV*RIFSFAPPTVSHYV
Trigger: GACATAGTGTGACACTGTGGGAGGGGCGAAGCTGAATATTCTCCACACACAACAATTACTGGTGTCATGTGAAAGTGAGCACTCCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 90 bp AAATCTAGGCAGTGGCAGGAAGGCAGGAAGGACGATGACAGTGGATaGCTTAGTCAGCATCAACTCATAGAACACAGGATTTTCAACATG +
Preference number: 1 (lower is better)
Translates to: KSRQWQEGRKDDDSG*LSQHQLIEHRIFNM
Trigger: CATGTTGAAAATCCTGTGTTCTATGAGTTGATGCTGACTAAGCCATCCACTGTCATCGTCCTTCCTGCCTTCCTGCCACTGCCTAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 90 bp TTGGGCAAGGTCATTCTAAGTGGACATAAAACCCAGGGATTGGAGTaGTCACTTTCACATGACACCAGTAATTGTTGTGTGTGGAGAATA +
Preference number: 1 (lower is better)
Translates to: LGKVILSGHKTQGLE*SLSHDTSNCCVWRI
Trigger: TATTCTCCACACACAACAATTACTGGTGTCATGTGAAAGTGAGCACTCCAATCCCTGGGTTTTATGTCCACTTAGAATGACCTTGCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 90 bp ATATACATACATACATCACCCGTTAGGGGCTCTCGTCACCAAAGTTaGAAGAACCACAAAGATCCCATGCCACAATGTCCTTGTTTTATG +
Preference number: 1 (lower is better)
Translates to: IYIHTSPVRGSRHQS*KNHKDPMPQCPCFM
Trigger: CATAAAACAAGGACATTGTGGCATGGGATCTTTGTGGTTCTTCCAACTTTGGTGACGAGAGCCCCTAACGGGTGATGTATGTATGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR TCA 90 bp CTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCGGGGGAGAGAGGGCCTaGTGGCTCAGAGCCCATCAG +
Preference number: 2 (lower is better)
Translates to: LILLSWVLPAQRAWEGGVGGERA*WLRAHQ
Trigger: CTGATGGGCTCTGAGCCATCAGGCCCTCTCTCCCCC...GACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CAA 90 bp CTTCATCCTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTaGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCT +
Preference number: 2 (lower is better)
Translates to: LHPHPVVLGVASTEG*GGRCPAEVLGERGP
Trigger: AGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAGGATGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR-3UTR TCA 90 bp GGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCGGGGGAGAGAGGGCCTaGTGGCTCAGAGCCCATCAG +
Preference number: 2 (lower is better)
Translates to: GNIAFRSTLTPDLLPTFIGGERA*WLRAHQ
Trigger: CTGATGGGCTCTGAGCCATCAGGCCCTCTCTCCCCC...GATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR-3UTR GCA 90 bp GTGGAGCAGGCAGTGGCCATGGACCAGAATCAGGTGGCCAGGAGAGACAGCAAGTGTTGTCTTGGGTGTTaGCAGCACAGAGGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: VEQAVAMDQNQVARRDSKCCLGC*QHRGLG
Trigger: CCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACA...CTTGCTGTCTCTCCTGGCCACCTGATTCTGGTCCATGGCCACTGCCTGCTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR GCA 90 bp CTGATATCCCACCCCTGGCTGTATCCATCACCCTTCCCTGGCCCATGTCTCTGCTTTGCACAGGCAGGCTaGAGAGGCTCTGGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: LISHPWLYPSPFPGPCLCFAQAG*RGSGRE
Trigger: CTCTCTCCCAGAGCCTCTGCAGCCTGCCTGTGCAAA...GCAGAGACATGGGCCAGGGAAGGGTGATGGATACAGCCAGGGGTGGGATATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp GCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCCAGCACAGAGGGCTTaGGAGGGCGGTGTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: AFSVPRGFPSFPPSTCWCPAQRA*EGGVLL
Trigger: CAGCAGGACACCGCCCTCCCAAGCCCTCTGTGCTGG...ACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CAA 90 bp GCTCACTCCAGACTTGCTACCAACCTTCATCCTCATCCTGTTGTCTaGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: AHSRLATNLHPHPVV*GVASTEGLGGRCPA
Trigger: AGCAGGACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CAA 90 bp TCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCTCATCCTGTaGTCTTGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTC +
Preference number: 2 (lower is better)
Translates to: STLTPDLLPTFILIL*SWVLPAQRAWEGGV
Trigger: GACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR-3UTR GCA 90 bp GTGGAGCAGGCAGTGGCCATGGACCAGAATCAGGTGGCCAGGAGAGACAGCAAGTGTGTACCTATTCCATaGCCAACCCTGGGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: VEQAVAMDQNQVARRDSKCVPIP*PTLGLP
Trigger: TGGCAGACCCAGGGTTGGGCATGGAATAGGTACACA...CTTGCTGTCTCTCCTGGCCACCTGATTCTGGTCCATGGCCACTGCCTGCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp GCCTCTTGCTACTGGACAGGACACTGGATGGCAGAAAACGATGCAACCCCAAGCTTCCATGCCCAACCCTaGGTCTGCCAGCTGACCTGC +
Preference number: 2 (lower is better)
Translates to: ASCYWTGHWMAENDATPSFHAQP*VCQLTC
Trigger: GCAGGTCAGCTGGCAGACCCAGGGTTGGGCATGGAA...GCTTGGGGTTGCATCGTTTTCTGCCATCCAGTGTCCTGTCCAGTAGCAAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp CTGATATCCCACCCCTGGCTGTATCCATCACCCTTCCCTGGCCCATGTCTCTGCGGCACTGGGAGGAGCTaGAGAAGATCTGAGAAGGCT +
Preference number: 2 (lower is better)
Translates to: LISHPWLYPSPFPGPCLCGTGRS*RRSEKA
Trigger: AGCCTTCTCAGATCTTCTCCAGCTCCTCCCAGTGCC...GCAGAGACATGGGCCAGGGAAGGGTGATGGATACAGCCAGGGGTGGGATATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 90 bp CAGGGACAAGCCATGGAGGCTTTAGGACAGGGGAGAGTTGGCCTCTaGCTACTGGACAGGACACTGGATGGCAGAAAACGATGCAACCCC +
Preference number: 2 (lower is better)
Translates to: QGQAMEALGQGRVGL*LLDRTLDGRKRCNP
Trigger: GGGGTTGCATCGTTTTCTGCCATCCAGTGTCCTGTCCAGTAGCAAGAGGCCAACTCTCCCCTGTCCTAAAGCCTCCATGGCTTGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR TCA 90 bp GTGGAGCAGGCAGTGGCCATGGACCAGAATCAGGTGGCCAGGAGAGACAGCAAGCCTGTAGACAATGCCTaGCCATTCCATGCTTCAGTC +
Preference number: 2 (lower is better)
Translates to: VEQAVAMDQNQVARRDSKPVDNA*PFHASV
Trigger: GACTGAAGCATGGAATGGTCAGGCATTGTCTACAGG...CTTGCTGTCTCTCCTGGCCACCTGATTCTGGTCCATGGCCACTGCCTGCTCCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp GGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCGTCCTGCTGAAGTCCTaGGGGAGAGAGGGCCTGATG +
Preference number: 2 (lower is better)
Translates to: GNIAFRSTLTPDLLPTFIVLLKS*GREGLM
Trigger: CATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGAC...GATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp GCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTGTCCTGCTGAAGTCCTaGGGGAGAGAGGGCCTGATG +
Preference number: 2 (lower is better)
Translates to: AFSVPRGFPSFPPSTCWCVLLKS*GREGLM
Trigger: CATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGAC...ACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR-3UTR GCA 90 bp CATGCCAACTTGAAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTGCCTGCTGAGCCATGCATCGTGCTGTaGTGGGATGCAGGCGTCCAG +
Preference number: 2 (lower is better)
Translates to: HANLKGRALSQSLWLPAEPCIVL*WDAGVQ
Trigger: CTGGACGCCTGCATCCCAGCACAGCACGATGCATGG...CTCAGCAGGCAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR GCA 90 bp ATCCATGCCCACAGGGCAGATGCTTTTCTTGCTCAAAGTTTGGATGGAACTCCCGCTGGCCATGCATCGTaGTGTGCTGGGATGCAGGCG +
Preference number: 2 (lower is better)
Translates to: IHAHRADAFLAQSLDGTPAGHAS*CAGMQA
Trigger: CGCCTGCATCCCAGCACAGCACGATGCATGGCCAGC...GGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 90 bp AGTCCCTTTGGCTGCCTGCTGAGATTCAGAGCAAAGCTCTGCACTTaGAGGCTGATATCCCACCCCTGGCTGTATCCATCACCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: SPFGCLLRFRAKLCT*RLISHPWLYPSPFP
Trigger: AGGGAAGGGTGATGGATACAGCCAGGGGTGGGATATCAGCCTCAAAGTGCAGAGCTTTGCTCTGAATCTCAGCAGGCAGCCAAAGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 90 bp TCTACAGGGGCTGAGTGGAGACCCAGTTGGAGGAGGCTGGATCCTTaGTTAGGAAGGCAAAGGCCCGGGGAACCTGATTTCCAAGTTGAT +
Preference number: 2 (lower is better)
Translates to: STGAEWRPSWRRLDP*LGRQRPGEPDFQVD
Trigger: ATCAACTTGGAAATCAGGTTCCCCGGGCCTTTGCCTTCCTAACAAAGGATCCAGCCTCCTCCAACTGGGTCTCCACTCAGCCCCTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp CCCATCATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCACCAGCACAGAGGGCTTaGGAGGGCGGTGTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: PIISSFHMLVSVPFFPMAPAQRA*EGGVLL
Trigger: CAGCAGGACACCGCCCTCCCAAGCCCTCTGTGCTGG...TGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CAA 90 bp GAGCCACCTCACACTGGCACCATCATCAGACACCAGGACTACGTCTaGGCACCTAGAGAGTTGTACTCCCATAGGCATCTCAGAGATAGG +
Preference number: 2 (lower is better)
Translates to: EPPHTGTIIRHQDYV*APRELYSHRHLRDR
Trigger: CCTATCTCTGAGATGCCTATGGGAGTACAACTCTCTAGGTGCCAAGACGTAGTCCTGGTGTCTGATGATGGTGCCAGTGTGAGGTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 90 bp GGGCTCAGCTACAGATCGGCAAAGGCCATGTTTGCACTGAGCAAATaGTGGGCTCCTGCCAACCTCACCTTCTTTACCGGAAAGTCAAGG +
Preference number: 2 (lower is better)
Translates to: GLSYRSAKAMFALSK*WAPANLTFFTGKSR
Trigger: CCTTGACTTTCCGGTAAAGAAGGTGAGGTTGGCAGGAGCCCACAATTTGCTCAGTGCAAACATGGCCTTTGCCGATCTGTAGCTGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp CTGATATCCCACCCCTGGCTGTATCCATCACCCTTCCCTGGCCCATGTCTCTGCATTCAATCAGCACCTTaGGACCCTTTTGCAGAAGAG +
Preference number: 2 (lower is better)
Translates to: LISHPWLYPSPFPGPCLCIQSAP*DPFAEE
Trigger: CTCTTCTGCAAAAGGGTCCCAAGGTGCTGATTGAAT...GCAGAGACATGGGCCAGGGAAGGGTGATGGATACAGCCAGGGGTGGGATATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 90 bp CAAAGGCCCGGGGAACCTGATTTCCAAGTTGATTGCCATGCCAACTaGAAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTGCCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: QRPGEPDFQVDCHAN*KGRALSQSLWLPAE
Trigger: CTCAGCAGGCAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGCATGGCAATCAACTTGGAAATCAGGTTCCCCGGGCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR TCA 90 bp ATCCATGCCCACAGGGCAGATGCTTTTCTTGCTCAAAGTTTGGATGGAACTCCCAGAGCCACAAGCCCATaGAACAAACAGGGACAGGGG +
Preference number: 2 (lower is better)
Translates to: IHAHRADAFLAQSLDGTPRATSP*NKQGQG
Trigger: CCCCTGTCCCTGTTTGTTTCATGGGCTTGTGGCTCT...GGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp AGTTGGCCTCTTGCTACTGGACAGGACACTGGATGGCAGAAAACGATGCAACCCTTTCCACGGTCTGAGTaGCCTTACCAGAAGAGCCAT +
Preference number: 2 (lower is better)
Translates to: SWPLATGQDTGWQKTMQPFPRSE*PYQKSH
Trigger: ATGGCTCTTCTGGTAAGGCCACTCAGACCGTGGAAA...GGGTTGCATCGTTTTCTGCCATCCAGTGTCCTGTCCAGTAGCAAGAGGCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp TTGCCGATTCTGTTACAAGTCAATGCACTCGGGCAGGCCTCGTCTCCAATTTCCGGGAGAGAGAATTCTTaGCCCTCCTGCAATGCTCAG +
Preference number: 2 (lower is better)
Translates to: LPILLQVNALGQASSPISGRENS*PSCNAQ
Trigger: CTGAGCATTGCAGGAGGGCCAAGAATTCTCTCTCCC...GGAAATTGGAGACGAGGCCTGCCCGAGTGCATTGACTTGTAACAGAATCGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 90 bp GCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTaGCTACCAACCTTCATCCTCATCCTGTTGTCTTGGGTGTTGCCA +
Preference number: 2 (lower is better)
Translates to: ANKGNIAFRSTLTPD*LPTFILILLSWVLP
Trigger: TGGCAACACCCAAGACAACAGGATGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CAA 90 bp CCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTTaGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGT +
Preference number: 2 (lower is better)
Translates to: PCHPPLSHSRKVRVS*LAVLCTEFFKVPQS
Trigger: ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR-3UTR GCA 90 bp TCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCTGTTGTCTTGGGTGTTaGCAGCACAGAGGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: SSCWCFVLHGNPMSPSPFCCLGC*QHRGLG
Trigger: CCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACA...GAAAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp AGAGCACGAGACTCCGAAGACCAGAGAAGGTGGCTGTTCCTCAAGGATGTGGGATCTGCCCTATGTATGTaGGGTCTGGAATTTAGGGAT +
Preference number: 2 (lower is better)
Translates to: RARDSEDQRRWLFLKDVGSALCM*GLEFRD
Trigger: ATCCCTAAATTCCAGACCCCACATACATAGGGCAGA...TCCCACATCCTTGAGGAACAGCCACCTTCTCTGGTCTTCGGAGTCTCGTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 90 bp GCCATTCCAGAGCTCAGGCCATTCAATCAGCACCTTGGGACCCTTTaGCAGAAGAGTCAACTCTTAGGAATGTGCAAAGCAGGACTGAGT +
Preference number: 2 (lower is better)
Translates to: AIPELRPFNQHLGTL*QKSQLLGMCKAGLS
Trigger: ACTCAGTCCTGCTTTGCACATTCCTAAGAGTTGACTCTTCTGCAAAAGGGTCCCAAGGTGCTGATTGAATGGCCTGAGCTCTGGAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR TCA 90 bp ATGAAGGCTTACGGACTTGTGAAGTTGCCGATTCTGTTACAAGTCAATGCACTCTCTGCTGTGAGACTGTaGACCTGGCCAGGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: MKAYGLVKLPILLQVNALSAVRL*TWPGSE
Trigger: CTCACTGCCTGGCCAGGTTCACAGTCTCACAGCAGA...GAGTGCATTGACTTGTAACAGAATCGGCAACTTCACAAGTCCGTAAGCCTTCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR GCA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTCGCTCACTCCAGACTTaGTACCAACCTTCATCCTCA +
Preference number: 2 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLRSLQT*YQPSSS
Trigger: TGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCG...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp GAGGCCTGTAGACAATGCCTGACCATTCCATGCTTCAGTCCTATCTCCCTAACACTTAGGATACTAAGGTaGCAGGGACAAGCCATGGAG +
Preference number: 2 (lower is better)
Translates to: EACRQCLTIPCFSPISLTLRILR*QGQAME
Trigger: CTCCATGGCTTGTCCCTGCCACCTTAGTATCCTAAG...TGTTAGGGAGATAGGACTGAAGCATGGAATGGTCAGGCATTGTCTACAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 90 bp CCATCAGAGGGTCCATCTCTGAAACTGTATCTTATGTTCCCCATGTaGGGAACAGCAACTGAAGGTGAAACCACAAGAGAGTGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: PSEGPSLKLYLMFPM*GTATEGETTREWSG
Trigger: CCCAGACCACTCTCTTGTGGTTTCACCTTCAGTTGCTGTTCCCAACATGGGGAACATAAGATACAGTTTCAGAGATGGACCCTCTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp ATCCATGCCCACAGGGCAGATGCTTTTCTTGCTCAAAGTTTGGATGGAACTCCCTTCCCTACAGAGCATTaGAGCTCCTTCCTGGATGTT +
Preference number: 2 (lower is better)
Translates to: IHAHRADAFLAQSLDGTPFPTEH*SSFLDV
Trigger: AACATCCAGGAAGGAGCTCCAATGCTCTGTAGGGAA...GGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp AGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCCATGGTCTCATCCTGTTGTCTTaGGTGTTGCCAGCACAGAGG +
Preference number: 2 (lower is better)
Translates to: RHLIHHSGSSCWCFVLHGLILLS*VLPAQR
Trigger: CCTCTGTGCTGGCAACACCCAAGACAACAGGATGAG...ACCATGGAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp GAGGCCTGTAGACAATGCCTGACCATTCCATGCTTCAGTCCTATCTCCCTAACACCTCCTTCCACATGTTaGTGTCTGTACCTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: EACRQCLTIPCFSPISLTPPSTC*CLYLSF
Trigger: GAAAGAAAGGTACAGACACCAACATGTGGAAGGAGG...TGTTAGGGAGATAGGACTGAAGCATGGAATGGTCAGGCATTGTCTACAGGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp TTTCAAACCAGCAATCAAAACAGATGTTCAAAGTATTGGCACCCCTATGGGTGTCCTGCCGAATGGCACTaGGAGGAGCTGGAGAAGATC +
Preference number: 2 (lower is better)
Translates to: FQTSNQNRCSKYWHPYGCPAEWH*EELEKI
Trigger: GATCTTCTCCAGCTCCTCCCAGTGCCATTCGGCAGG...ACACCCATAGGGGTGCCAATACTTTGAACATCTGTTTTGATTGCTGGTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTaGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGGAAACATC +
Preference number: 2 (lower is better)
Translates to: FLSPTGLPIISSFHM*VSVPFFPMANKGNI
Trigger: GATGTTTCCTTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp CTGCCCAACCTAGGCATGTGGCTTATAATGAAAATATCTGGATTGTGTGTCTTCGGACAGGACACTGGATaGCAGAAAACGATGCAACCC +
Preference number: 2 (lower is better)
Translates to: LPNLGMWLIMKISGLCVFGQDTG*QKTMQP
Trigger: GGGTTGCATCGTTTTCTGCCATCCAGTGTCCTGTCC...GAAGACACACAATCCAGATATTTTCATTATAAGCCACATGCCTAGGTTGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR TCA 90 bp GTCCGGAGGTTTCCAGAAGGGTTCAGAGATAAGATAAAAGATTCAGCTCAAAAGGGCTCAAGAGAGAGTTaGAGATCTGGACAGAGATGG +
Preference number: 2 (lower is better)
Translates to: VRRFPEGFRDKIKDSAQKGSRES*RSGQRW
Trigger: CCATCTCTGTCCAGATCTTCAACTCTCTCTTGAGCC...CTTTTGAGCTGAATCTTTTATCTTATCTCTGAACCCTTCTGGAAACCTCCGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR TCA 90 bp AGCATAGCCCTAGATCTGCCCAACCTAGGCATGTGGCTTATAATGAAAATATCTAACATGAGCTTGTGTTaGGAGCCACAAGCCCATGAA +
Preference number: 2 (lower is better)
Translates to: SIALDLPNLGMWLIMKISNMSLC*EPQAHE
Trigger: TTCATGGGCTTGTGGCTCTCAACACAAGCTCATGTT...AGATATTTTCATTATAAGCCACATGCCTAGGTTGGGCAGATCTAGGGCTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR GCA 90 bp AGCATAGCCCTAGATCTGCCCAACCTAGGCATGTGGCTTATAATGAAAATATCTGATGCTTGGAAGGTATaGAAGCAAATCCGAGTGGGA +
Preference number: 2 (lower is better)
Translates to: SIALDLPNLGMWLIMKISDAWKV*KQIRVG
Trigger: TCCCACTCGGATTTGCTTGCATACCTTCCAAGCATC...AGATATTTTCATTATAAGCCACATGCCTAGGTTGGGCAGATCTAGGGCTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp ATGAAGGCTTACGGACTTGTGAAGTTGCCGATTCTGTTACAAGTCAATGCACTCTTGACTAGCACCATCTaGACACAAGAAAGTACGGAC +
Preference number: 2 (lower is better)
Translates to: MKAYGLVKLPILLQVNALLTSTI*TQESTD
Trigger: GTCCGTACTTTCTTGTGTCCAGATGGTGCTAGTCAA...GAGTGCATTGACTTGTAACAGAATCGGCAACTTCACAAGTCCGTAAGCCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR GCA 90 bp GTTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACCGCTCACTCCAGACTTaGTACCAACCTTCATCCTCA +
Preference number: 2 (lower is better)
Translates to: VNIYSAAIPIRRHHYKHNRSLQT*YQPSSS
Trigger: TGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCG...GTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CAA 90 bp TCACCAAAGTTGGAAGAACCACAAAGATCCCATGCCACAATGTCCTaGTTTTATGACTTAGAAAATCTGAGGTCCAGAAGAGTTGGTTGT +
Preference number: 2 (lower is better)
Translates to: SPKLEEPQRSHATMS*FYDLENLRSRRVGC
Trigger: ACAACCAACTCTTCTGGACCTCAGATTTTCTAAGTCATAAAACAAGGACATTGTGGCATGGGATCTTTGTGGTTCTTCCAACTTTGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR TCA 90 bp TCCTTGTTTTATGACTTAGAAAATCTGAGGTCCAGAAGAGTTGGTTGTGTGTCCTTGTTGATTTCTTCTTaGCTAGCACCATCTGGACAC +
Preference number: 2 (lower is better)
Translates to: SLFYDLENLRSRRVGCVSLLISS*LAPSGH
Trigger: GTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAA...GGACACACAACCAACTCTTCTGGACCTCAGATTTTCTAAGTCATAAAACAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 90 bp CAGCAGGGACCAAAGCCAAGCTCATGGATTACTAATCAAATGAATTaGCTTTTGAGCAAAACTTCCCAAATCAAGGCCCTTCATAAGAAA +
Preference number: 2 (lower is better)
Translates to: QQGPKPSSWITNQMN*LLSKTSQIKALHKK
Trigger: TTTCTTATGAAGGGCCTTGATTTGGGAAGTTTTGCTCAAAAGCAAATTCATTTGATTAGTAATCCATGAGCTTGGCTTTGGTCCCTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CCA 90 bp ATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTTACCTCCTTCCACATGTTaGTGTCTGTACCTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: IYSAAIPIRRHHYKHNFLPPSTC*CLYLSF
Trigger: GAAAGAAAGGTACAGACACCAACATGTGGAAGGAGG...TAAGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CAA 90 bp GGACCAAAGCCAAGCTCATGGATTACTAATCAAATGAATTTGCTTTaGAGCAAAACTTCCCAAATCAAGGCCCTTCATAAGAAACAAAAC +
Preference number: 2 (lower is better)
Translates to: GPKPSSWITNQMNLL*SKTSQIKALHKKQN
Trigger: GTTTTGTTTCTTATGAAGGGCCTTGATTTGGGAAGTTTTGCTCAAAAGCAAATTCATTTGATTAGTAATCCATGAGCTTGGCTTTGGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 90 bp TGTTTTTACAAATGGCTTCGTAATGTTGTAAAGAGGTTACTGATGTaGTCCAGGAGAGTGGTAATCTATATACTGTACAAGAATGCTGTG +
Preference number: 2 (lower is better)
Translates to: CFYKWLRNVVKRLLM*SRRVVIYILYKNAV
Trigger: CACAGCATTCTTGTACAGTATATAGATTACCACTCTCCTGGACAACATCAGTAACCTCTTTACAACATTACGAAGCCATTTGTAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CAA 90 bp CAGGTCCATGCACACATGTGTTATGAGGCTGAGGTGGGCCCTGAGCCCAGGACTGCCAGCACAGAGGGCTaGGGAGGGCGGTGTCCTGCT +
Preference number: 3 (lower is better)
Translates to: QVHAHMCYEAEVGPEPRTASTEG*GGRCPA
Trigger: AGCAGGACACCGCCCTCCCAAGCCCTCTGTGCTGGC...AGTCCTGGGCTCAGGGCCCACCTCAGCCTCATAACACATGTGTGCATGGACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 72 bp ACTCCAGGTGGCGGGGCTCATGTCCCAGTTCTGCTGTaGGACTGTGAACCTGGCCAGGCAGTGAGTACGGAT +
Preference number: 3 (lower is better)
Translates to: TPGGGAHVPVLL*DCEPGQAVSTD
Trigger: ATCCGTACTCACTGCCTGGCCAGGTTCACAGTCTCACAGCAGAACTGGGACATGAGCCCCGCCACCTGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp CTGTGTGATGAGTTCTGCTGGCCATGCATCGTGCTGTaGTGGGATGCAGGCGTCCAGCAAAAGGGCTGGTCC +
Preference number: 3 (lower is better)
Translates to: LCDEFCWPCIVL*WDAGVQQKGWS
Trigger: GGACCAGCCCTTTTGCTGGACGCCTGCATCCCAGCACAGCACGATGCATGGCCAGCAGAACTCATCACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp GGGACAAGCCATGGAGGCTTTAGGACAGGGGAGAGTTaGCCTCTTGCTACTGGACAGGACACTGGATGGCAG +
Preference number: 3 (lower is better)
Translates to: GTSHGGFRTGES*PLATGQDTGWQ
Trigger: CTGCCATCCAGTGTCCTGTCCAGTAGCAAGAGGCCAACTCTCCCCTGTCCTAAAGCCTCCATGGCTTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp CGTGTTCCTCAAGCCAAACCCGGAGCCACCTCACACTaGCACCATCATCAGACACCAGGACTACGTCTTGGC +
Preference number: 3 (lower is better)
Translates to: RVPQAKPGATSH*HHHQTPGLRLG
Trigger: GCCAAGACGTAGTCCTGGTGTCTGATGATGGTGCCAGTGTGAGGTGGCTCCGGGTTTGGCTTGAGGAACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 72 bp GAGGCAACCGAGGGCTGCTCTCCCAGGAGAACCTGCTaGCTAAGAGTCTGCTTTCTACAGATGTCAGCCCAG +
Preference number: 3 (lower is better)
Translates to: EATEGCSPRRTC*LRVCFLQMSAQ
Trigger: CTGGGCTGACATCTGTAGAAAGCAGACTCTTAGTCAGCAGGTTCTCCTGGGAGAGCAGCCCTCGGTTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp GCAAATGGGACCTGGTTCCCACTGGATGAACATTCCTaGTGCCCACCCTTTGCCCCATTTCCTGGAGCTGTG +
Preference number: 3 (lower is better)
Translates to: ANGTWFPLDEHS*CPPFAPFPGAV
Trigger: CACAGCTCCAGGAAATGGGGCAAAGGGTGGGCAGCAGGAATGTTCATCCAGTGGGAACCAGGTCCCATTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp AAGCCTGGCAGTGTAGGAGGCTGGCGGTGTGGGGAATaGATGCAGGAGACTCCTTTGGGCAAGGTCATTCTA +
Preference number: 3 (lower is better)
Translates to: KPGSVGGWRCGE*MQETPLGKVIL
Trigger: TAGAATGACCTTGCCCAAAGGAGTCTCCTGCATCCATTCCCCACACCGCCAGCCTCCTACACTGCCAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp TTAAGTCAAGCCTGGCAGTGTAGGAGGCTGGCGGTGTaGGGAATGGATGCAGGAGACTCCTTTGGGCAAGGT +
Preference number: 3 (lower is better)
Translates to: LSQAWQCRRLAV*GMDAGDSFGQG
Trigger: ACCTTGCCCAAAGGAGTCTCCTGCATCCATTCCCCACACCGCCAGCCTCCTACACTGCCAGGCTTGACTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 72 bp CAGAGAAGCAGCCTGTGTTCATGTACACACTCTGGGTaGAAGGTGCTCTATCAGGGACACTCCAGGTGGCGG +
Preference number: 3 (lower is better)
Translates to: QRSSLCSCTHSG*KVLYQGHSRWR
Trigger: CCGCCACCTGGAGTGTCCCTGATAGAGCACCTTTCACCCAGAGTGTGTACATGAACACAGGCTGCTTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp GTTCTTTGGCGGTCCCTTTGCCCCTTGGTATTTGTTTaGGTGTTCCTCAAGCCAAACCCGGAGCCACCTCAC +
Preference number: 3 (lower is better)
Translates to: VLWRSLCPLVFV*VFLKPNPEPPH
Trigger: GTGAGGTGGCTCCGGGTTTGGCTTGAGGAACACGCAAACAAATACCAAGGGGCAAAGGGACCGCCAAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp CTTCGGGCTCAGCTACAGATCGGCAAAGGCCATGTTTaGACTGAGCAAATTGTGGGCTCCTGCCAACCTCAC +
Preference number: 3 (lower is better)
Translates to: LRAQLQIGKGHV*TEQIVGSCQPH
Trigger: GTGAGGTTGGCAGGAGCCCACAATTTGCTCAGTGCAAACATGGCCTTTGCCGATCTGTAGCTGAGCCCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp ATAGTCTCTCCCATCACCTGTCCTTCCAAACCTCCCTaGGAAACACACCGGCTCATGCCAACGCGGTTTCCA +
Preference number: 3 (lower is better)
Translates to: IVSPITCPSKPP*ETHRLMPTRFP
Trigger: TGGAAACCGCGTTGGCATGAGCCGGTGTGTTTCCCAGGGAGGTTTGGAAGGACAGGTGATGGGAGAGACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp TGGTGGAGCAGGCAGTGGCCATGGACCAGAATCAGGTaGCCAGGAGAGACAGCAAGTATCAAGGGGTCTTAT +
Preference number: 3 (lower is better)
Translates to: WWSRQWPWTRIR*PGETASIKGSY
Trigger: ATAAGACCCCTTGATACTTGCTGTCTCTCCTGGCCACCTGATTCTGGTCCATGGCCACTGCCTGCTCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp GAACGAAGAGCACGAGACTCCGAAGACCAGAGAAGGTaGCTGTTCCTCAAGGATGTGGGATCCATGCCCACA +
Preference number: 3 (lower is better)
Translates to: ERRARDSEDQRR*LFLKDVGSMPT
Trigger: TGTGGGCATGGATCCCACATCCTTGAGGAACAGCCACCTTCTCTGGTCTTCGGAGTCTCGTGCTCTTCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 72 bp CTGATTTGTGGCAAATGGGACCTGGTTCCCACTGGATaGACATTCCTGCTGCCCACCCTTTGCCCCATTTCC +
Preference number: 3 (lower is better)
Translates to: LICGKWDLVPTG*TFLLPTLCPIS
Trigger: GGAAATGGGGCAAAGGGTGGGCAGCAGGAATGTTCATCCAGTGGGAACCAGGTCCCATTTGCCACAAATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 72 bp GGCTCAGCTACAGATCGGCAAAGGCCATGTTTGCACTaGGCAAATTGTGGGCTCCTGCCAACCTCACCTTCT +
Preference number: 3 (lower is better)
Translates to: GSATDRQRPCLH*ANCGLLPTSPS
Trigger: AGAAGGTGAGGTTGGCAGGAGCCCACAATTTGCTCAGTGCAAACATGGCCTTTGCCGATCTGTAGCTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp CCCTTTGGCTGCCTGCTGAGATTCAGAGCAAAGCTCTaGACTTTGAGGCTGATATCCCACCCCTGGCTGTAT +
Preference number: 3 (lower is better)
Translates to: PFGCLLRFRAKL*TLRLISHPWLY
Trigger: ATACAGCCAGGGGTGGGATATCAGCCTCAAAGTGCAGAGCTTTGCTCTGAATCTCAGCAGGCAGCCAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp ATAAAGATGCTTGGAAGGTATGCAAGCAAATCCGAGTaGGAGGCAACCGAGGGCTGCTCTCCCAGGAGAACC +
Preference number: 3 (lower is better)
Translates to: IKMLGRYASKSE*EATEGCSPRRT
Trigger: GGTTCTCCTGGGAGAGCAGCCCTCGGTTGCCTCCCACTCGGATTTGCTTGCATACCTTCCAAGCATCTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp GATATCCCACCCCTGGCTGTATCCATCACCCTTCCCTaGCCCATGTCTCTGCTAATAGACATCGCTGGAGTA +
Preference number: 3 (lower is better)
Translates to: DIPPLAVSITLP*PMSLLIDIAGV
Trigger: TACTCCAGCGATGTCTATTAGCAGAGACATGGGCCAGGGAAGGGTGATGGATACAGCCAGGGGTGGGATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp CAGCACTTTTCTACAGGGGCTGAGTGGAGACCCAGTTaGAGGAGGCTGGATCCTTTGTTAGGAAGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: QHFSTGAEWRPS*RRLDPLLGRQR
Trigger: CCTTTGCCTTCCTAACAAAGGATCCAGCCTCCTCCAACTGGGTCTCCACTCAGCCCCTGTAGAAAAGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 72 bp GCTCTGTATCAAGGATCAGGTGCCACAGCACTCACATaGCTCCTGTGTGATGAGTTCTGCTGGCCATGCATC +
Preference number: 3 (lower is better)
Translates to: ALYQGSGATALT*LLCDEFCWPCI
Trigger: GATGCATGGCCAGCAGAACTCATCACACAGGAGTCATGTGAGTGCTGTGGCACCTGATCCTTGATACAGAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp GAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTaGTACCAACCTTCATCCTCATCCTGTTGTCTTGGG +
Preference number: 3 (lower is better)
Translates to: ETSPFAPRSLQT*YQPSSSSCCLG
Trigger: CCCAAGACAACAGGATGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR GCA 72 bp AGTGATGCCACAGTAAACAAAGAAATGGGACTCGGCTaGGGTTGCCCAAGCTTTCCAGCCAGTCTTTGGGCT +
Preference number: 3 (lower is better)
Translates to: SDATVNKEMGLG*GCPSFPASLWA
Trigger: AGCCCAAAGACTGGCTGGAAAGCTTGGGCAACCGCAGCCGAGTCCCATTTCTTTGTTTACTGTGGCATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp TGCAGAGGCTCTGGGAGAGAGAATTCTTGGCCCTCCTaGAATGCTCAGTTGTTCCAGAGGCCTGTAGACAAT +
Preference number: 3 (lower is better)
Translates to: CRGSGRENSWPS*NAQLFQRPVDN
Trigger: ATTGTCTACAGGCCTCTGGAACAACTGAGCATTGCAGGAGGGCCAAGAATTCTCTCTCCCAGAGCCTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp TCCCATAGGCATCTCAGAGATAGGGCAGGGAACAGTTaGATCATGGGATGCCGGAGTTCTCCAAGGCTTATC +
Preference number: 3 (lower is better)
Translates to: SHRHLRDRAGNS*IMGCRSSPRLI
Trigger: GATAAGCCTTGGAGAACTCCGGCATCCCATGATGCAACTGTTCCCTGCCCTATCTCTGAGATGCCTATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp GCGTGTCCCACCAGTTATATTATTCCCTTCCTTTTCTaGCATCCCAGGAGGGTAGCTGTTAGGACCTCCCCA +
Preference number: 3 (lower is better)
Translates to: ACPTSYIIPFLF*HPRRVAVRTSP
Trigger: TGGGGAGGTCCTAACAGCTACCCTCCTGGGATGGCAGAAAAGGAAGGGAATAATATAACTGGTGGGACACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp GGATGGGGTTTCTCTCTCTTTCTTAGGATACTAAGGTaGCAGGGACAAGCCATGGAGGCTTTAGGACAGGGG +
Preference number: 3 (lower is better)
Translates to: GWGFSLFLRILR*QGQAMEALGQG
Trigger: CCCCTGTCCTAAAGCCTCCATGGCTTGTCCCTGCCACCTTAGTATCCTAAGAAAGAGAGAGAAACCCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp GTGCTGTGCTGGGATGCAGGCGTCCAGCAAAAGGGCTaGTCCAGAAACACAGAGTTCTTTCTCTTTAGAGAG +
Preference number: 3 (lower is better)
Translates to: VLCWDAGVQQKG*SRNTEFFLFRE
Trigger: CTCTCTAAAGAGAAAGAACTCTGTGTTTCTGGACCAGCCCTTTTGCTGGACGCCTGCATCCCAGCACAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp CCTTTCAATGTGGAAATCAGGGCCAAATCTAGGCAGTaGCAGGAAGGCAGGAAGGACGATGACAGTGGATGG +
Preference number: 3 (lower is better)
Translates to: PFNVEIRAKSRQ*QEGRKDDDSGW
Trigger: CCATCCACTGTCATCGTCCTTCCTGCCTTCCTGCCACTGCCTAGATTTGGCCCTGATTTCCACATTGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp ATCATGTCTGTGAAACTTGCCCTCAGCTGTTTAACTTaGCTCAGAGAAGAGCAGCGGGCTGTGTCGGCCTCT +
Preference number: 3 (lower is better)
Translates to: IMSVKLALSCLT*LREEQRAVSAS
Trigger: AGAGGCCGACACAGCCCGCTGCTCTTCTCTGAGCCAAGTTAAACAGCTGAGGGCAAGTTTCACAGACATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CAA 90 bp AGTTGGCCTCTTGCTACTGGACAGGACACTGGATGGCAGAAAACGATGCAACCCTTCATCCTCATCCTGTaGTCTTGGGTGTTGCCAGCA +
Preference number: 3 (lower is better)
Translates to: SWPLATGQDTGWQKTMQPFILIL*SWVLPA
Trigger: TGCTGGCAACACCCAAGACAACAGGATGAGGATGAA...GGGTTGCATCGTTTTCTGCCATCCAGTGTCCTGTCCAGTAGCAAGAGGCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CAA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTACGCTCACTCCAGACTaGCTACCAACCTTCATCCTC +
Preference number: 3 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSTLTPD*LPTFIL
Trigger: GAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGT...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR-3UTR CAA 90 bp TCTACAGGGGCTGAGTGGAGACCCAGTTGGAGGAGGCTGGATCCTTTGTTAGGAGATTGCCATGCCAACTaGAAAGGAAGAGCTTTGTCT +
Preference number: 3 (lower is better)
Translates to: STGAEWRPSWRRLDPLLGDCHAN*KGRALS
Trigger: AGACAAAGCTCTTCCTTTCAAGTTGGCATGGCAATC...TCCTAACAAAGGATCCAGCCTCCTCCAACTGGGTCTCCACTCAGCCCCTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 72 bp AAAGTTTGGATGGAACTCCCTGCAGCAAGCACAACCTaGGTGTTAGGTCCCTTGGGAGCACTTCCCTACAGA +
Preference number: 3 (lower is better)
Translates to: KVWMELPAASTT*VLGPLGALPYR
Trigger: TCTGTAGGGAAGTGCTCCCAAGGGACCTAACACTCAGGTTGTGCTTGCTGCAGGGAGTTCCATCCAAACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp ATGTGGGATCCATGCCCACAGGGCAGATGCTTTTCTTaGTCAAAGTTTGGATGGAACTCCCTGCAGCAAGCA +
Preference number: 3 (lower is better)
Translates to: MWDPCPQGRCFS*SKFGWNSLQQA
Trigger: TGCTTGCTGCAGGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGATCCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp TCCTCAAGGATGTGGGATCCATGCCCACAGGGCAGATaGTTTTCTTGCTCAAAGTTTGGATGGAACTCCCTG +
Preference number: 3 (lower is better)
Translates to: SSRMWDPCPQGR*FSCSKFGWNSL
Trigger: CAGGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGATCCCACATCCTTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp AGTGCTTTGGTTTCTCAAGAACAGATGGCACATCTATaGACGGTGAGGACCTCCTGGGGTCTTAGGGAAGAG +
Preference number: 3 (lower is better)
Translates to: SALVSQEQMAHL*TVRTSWGLREE
Trigger: CTCTTCCCTAAGACCCCAGGAGGTCCTCACCGTGCATAGATGTGCCATCTGTTCTTGAGAAACCAAAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp TTCTTTCTCTTTAGAGAGCATCTGGGGTCAAGGAGTTaGTTAGTGGGGCTGGCCCAGATGTGCCACACAAAG +
Preference number: 3 (lower is better)
Translates to: FFLFREHLGSRS*LVGLAQMCHTK
Trigger: CTTTGTGTGGCACATCTGGGCCAGCCCCACTAACCAACTCCTTGACCCCAGATGCTCTCTAAAGAGAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp GCAAAATTCAGCAACCTACCCGAGGTTCATAGCTTGTaGTGGTGCAGATGTGGCTTAGCTCCCTGCTGTCTA +
Preference number: 3 (lower is better)
Translates to: AKFSNLPEVHSL*WCRCGLAPCCL
Trigger: TAGACAGCAGGGAGCTAAGCCACATCTGCACCACCACAAGCTATGAACCTCGGGTAGGTTGCTGAATTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 72 bp AAGGAACATGAGCTTGTGTTGAGAGCCACAAGCCCATaGAACAAACAGGGACAGGGGCTCACATCTCTCTTC +
Preference number: 3 (lower is better)
Translates to: KEHELVLRATSP*NKQGQGLTSLF
Trigger: GAAGAGAGATGTGAGCCCCTGTCCCTGTTTGTTTCATGGGCTTGTGGCTCTCAACACAAGCTCATGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 72 bp CACACACTTCAACTCAGGACGTGTGGAGGGCGTTCCTaGCCACAGTGCAGAAATAGATCTAGGAACATAAGC +
Preference number: 3 (lower is better)
Translates to: HTLQLRTCGGRS*PQCRNRSRNIS
Trigger: GCTTATGTTCCTAGATCTATTTCTGCACTGTGGTCAGGAACGCCCTCCACACGTCCTGAGTTGAAGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 72 bp TGGTTTCTCAAGAACAGATGGCACATCTATGCACGGTaGGGACCTCCTGGGGTCTTAGGGAAGAGTAGAACT +
Preference number: 3 (lower is better)
Translates to: WFLKNRWHIYAR*GPPGVLGKSRT
Trigger: AGTTCTACTCTTCCCTAAGACCCCAGGAGGTCCTCACCGTGCATAGATGTGCCATCTGTTCTTGAGAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp GGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTaGTTTCTCAGTCCCACGGGGCTTCCCATCATTTCC +
Preference number: 3 (lower is better)
Translates to: GPMYRVLQGSSK*FLSPTGLPIIS
Trigger: GGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGCACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR GCA 72 bp GTTCCAGAGGCCTGTAGACAATGCCTGACCATTCCATaGTTCAGTCCTATCTCCCTAACATGGTCCAATAGC +
Preference number: 3 (lower is better)
Translates to: VPEACRQCLTIP*FSPISLTWSNS
Trigger: GCTATTGGACCATGTTAGGGAGATAGGACTGAAGCATGGAATGGTCAGGCATTGTCTACAGGCCTCTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp GATGCTTTTCTTGCTCAAAGTTTGGATGGAACTCCCTaGAGCAAGCACAACCTGAGTGTTAGGTCCCTTGGG +
Preference number: 3 (lower is better)
Translates to: DAFLAQSLDGTP*SKHNLSVRSLG
Trigger: CCCAAGGGACCTAACACTCAGGTTGTGCTTGCTGCAGGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp AGAGAAGGTGGCTGTTCCTCAAGGATGTGGGATCCATaGCCACAGGGCAGATGCTTTTCTTGCTCAAAGTTT +
Preference number: 3 (lower is better)
Translates to: REGGCSSRMWDP*PQGRCFSCSKF
Trigger: AAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGATCCCACATCCTTGAGGAACAGCCACCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp AGGCAAAGGCCCGGGGAACCTGATTTCCAAGTTGATTaGCATGCCAACTTGAAAGGAAGAGCTTTGTCTCAG +
Preference number: 3 (lower is better)
Translates to: RQRPGEPDFQVD*HANLKGRALSQ
Trigger: CTGAGACAAAGCTCTTCCTTTCAAGTTGGCATGGCAATCAACTTGGAAATCAGGTTCCCCGGGCCTTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp CAGTGGCAGGAAGGCAGGAAGGACGATGACAGTGGATaGCTTAGTCAGCATCAACTCATAGAACACAGGATT +
Preference number: 3 (lower is better)
Translates to: QWQEGRKDDDSG*LSQHQLIEHRI
Trigger: AATCCTGTGTTCTATGAGTTGATGCTGACTAAGCCATCCACTGTCATCGTCCTTCCTGCCTTCCTGCCACTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CAA 90 bp TTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTGCCAGCACAGAGGGCTaGGGAGGGCGGTGTCCTGCT +
Preference number: 3 (lower is better)
Translates to: LTFIQLQYRLGDITTNTTASTEG*GGRCPA
Trigger: AGCAGGACACCGCCCTCCCAAGCCCTCTGTGCTGGC...AGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR-3UTR CAA 90 bp TTGCCGATTCTGTTACAAGTCAATGCACTCGGGCAGGCCTCGTCTCCAATTTCCAAGGTAAGAGTCTCTTaGCTAGCGGTCCTATGTACA +
Preference number: 3 (lower is better)
Translates to: LPILLQVNALGQASSPISKVRVS*LAVLCT
Trigger: TGTACATAGGACCGCTAGCAAAGAGACTCTTACCTT...GGAAATTGGAGACGAGGCCTGCCCGAGTGCATTGACTTGTAACAGAATCGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 72 bp GAGAGTCGAAATGTAGACAGCCCCACTTTGCATCAGTaGTGCCACAGTAAACAAAGAAATGGGACTCGGCTG +
Preference number: 3 (lower is better)
Translates to: ESRNVDSPTLHQ*CHSKQRNGTRL
Trigger: CAGCCGAGTCCCATTTCTTTGTTTACTGTGGCATCACTGATGCAAAGTGGGGCTGTCTACATTTCGACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 72 bp TACAGAAGTGGTTGCCCAGACCATCACAAACTCAACTaGTGCCATGCGAACTGTCTCCCCAGTTTAACTGGT +
Preference number: 3 (lower is better)
Translates to: YRSGCPDHHKLN*CHANCLPSLTG
Trigger: ACCAGTTAAACTGGGGAGACAGTTCGCATGGCATCAGTTGAGTTTGTGATGGTCTGGGCAACCACTTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 72 bp GGGAACCTGATTTCCAAGTTGATTGCCATGCCAACTTaGAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTGC +
Preference number: 3 (lower is better)
Translates to: GNLISKLIAMPT*KEELCLSPFGC
Trigger: GCAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGCATGGCAATCAACTTGGAAATCAGGTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp CCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTaGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAG +
Preference number: 3 (lower is better)
Translates to: PRGFPSFPPSTC*CLYLSFLWQTK
Trigger: CTTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CCA 72 bp AGGTTACAAATCAATAATGTCTCCTTAAGTCAAGCCTaGCAGTGTAGGAGGCTGGCGGTGTGGGGAATGGAT +
Preference number: 3 (lower is better)
Translates to: RLQINNVSLSQA*QCRRLAVWGMD
Trigger: ATCCATTCCCCACACCGCCAGCCTCCTACACTGCCAGGCTTGACTTAAGGAGACATTATTGATTTGTAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CAA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCCCTCATCCTGTTGTCTaGGGTGTTGCCAGCACAGAG +
Preference number: 3 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLPHPVV*GVASTE
Trigger: CTCTGTGCTGGCAACACCCAAGACAACAGGATGAGG...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR-3UTR CAA 90 bp AGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCCATGGTTTCATCCTCATCCTGTaGTCTTGGGTGTTGCCAGCA +
Preference number: 3 (lower is better)
Translates to: RHLIHHSGSSCWCFVLHGFILIL*SWVLPA
Trigger: TGCTGGCAACACCCAAGACAACAGGATGAGGATGAA...ACCATGGAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CCA 72 bp GCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTaGTGTTTCGTTCTCCATGGTAATCCCATGTCACCC +
Preference number: 3 (lower is better)
Translates to: ARHLIHHSGSSC*CFVLHGNPMSP
Trigger: GGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CCA 72 bp TGCTCACTTTCACATGACACCAGTAATTGTTGTGTGTaGAGAATATTCAGCTTCGCCCCTCCCACAGTGTCA +
Preference number: 3 (lower is better)
Translates to: CSLSHDTSNCCV*RIFSFAPPTVS
Trigger: TGACACTGTGGGAGGGGCGAAGCTGAATATTCTCCACACACAACAATTACTGGTGTCATGTGAAAGTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp CAACTTCTTCATCTATACATGATCCTCCCTCCCCTCTaGAGAGAGCTTCTGATTTCTTCAAAGCGTGTCCCA +
Preference number: 3 (lower is better)
Translates to: QLLHLYMILPPL*RELLISSKRVP
Trigger: TGGGACACGCTTTGAAGAAATCAGAAGCTCTCTCCAGAGGGGAGGGAGGATCATGTATAGATGAAGAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 72 bp CTTGAGTCATTGCTATGCCATCAGAGGGTCCATCTCTaGAACTGTATCTTATGTTCCCCATGTTGGGAACAG +
Preference number: 3 (lower is better)
Translates to: LESLLCHQRVHL*NCILCSPCWEQ
Trigger: CTGTTCCCAACATGGGGAACATAAGATACAGTTTCAGAGATGGACCCTCTGATGGCATAGCAATGACTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp TGGTTGCCCAGACCATCACAAACTCAACTGATGCCATaGGAACTGTCTCCCCAGTTTAACTGGTCAATAAAA +
Preference number: 3 (lower is better)
Translates to: WLPRPSQTQLMP*ELSPQFNWSIK
Trigger: TTTTATTGACCAGTTAAACTGGGGAGACAGTTCGCATGGCATCAGTTGAGTTTGTGATGGTCTGGGCAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp GCCATTTTCTTGCTTGGGGGTCATTACTTGAGTCATTaGTATGCCATCAGAGGGTCCATCTCTGAAACTGTA +
Preference number: 3 (lower is better)
Translates to: AIFLLGGHYLSH*YAIRGSISETV
Trigger: TACAGTTTCAGAGATGGACCCTCTGATGGCATAGCAATGACTCAAGTAATGACCCCCAAGCAAGAAAATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp GGATTGAAATACAGAGCTGTGAAGAAGGCATATGAATaGATCCTCATGAACGAAGAGCACGAGACTCCGAAG +
Preference number: 3 (lower is better)
Translates to: GLKYRAVKKAYE*ILMNEEHETPK
Trigger: CTTCGGAGTCTCGTGCTCTTCGTTCATGAGGATCCATTCATATGCCTTCTTCACAGCTCTGTATTTCAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CAA 90 bp GTCCGGAGGTTTCCAGAAGGGTTCAGAGATAAGATAAAAGATTCAGCTCAAAAGTTCTGGGTCATCTTGTaGGTGTTTCGTTCTCCATGG +
Preference number: 3 (lower is better)
Translates to: VRRFPEGFRDKIKDSAQKFWVIL*VFRSPW
Trigger: CCATGGAGAACGAAACACCAACAAGATGACCCAGAA...CTTTTGAGCTGAATCTTTTATCTTATCTCTGAACCCTTCTGGAAACCTCCGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CAA 90 bp GAAGGCTCTGCTTCTCTAGGAGACACACTTGTTAAAGCTACAAGATACACAGAACATTCAATCAGCACCTaGGGACCCTTTTGCAGAAGA +
Preference number: 3 (lower is better)
Translates to: EGSASLGDTLVKATRYTEHSIST*GPFCRR
Trigger: TCTTCTGCAAAAGGGTCCCAAGGTGCTGATTGAATG...TTCTGTGTATCTTGTAGCTTTAACAAGTGTGTCTCCTAGAGAAGCAGAGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CAA 90 bp GTCCGGAGGTTTCCAGAAGGGTTCAGAGATAAGATAAAAGATTCAGCTCAAAAGTTTCAAGGAAACACTTaGGGGCCATCTACGGATGGA +
Preference number: 3 (lower is better)
Translates to: VRRFPEGFRDKIKDSAQKFQGNT*GPSTDG
Trigger: TCCATCCGTAGATGGCCCCAAAGTGTTTCCTTGAAA...CTTTTGAGCTGAATCTTTTATCTTATCTCTGAACCCTTCTGGAAACCTCCGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CAA 90 bp TCCTTGTTTTATGACTTAGAAAATCTGAGGTCCAGAAGAGTTGGTTGTGTGTCCCTTATGTTCCCCATGTaGGGAACAGCAACTGAAGGT +
Preference number: 3 (lower is better)
Translates to: SLFYDLENLRSRRVGCVSLMFPM*GTATEG
Trigger: ACCTTCAGTTGCTGTTCCCAACATGGGGAACATAAG...GGACACACAACCAACTCTTCTGGACCTCAGATTTTCTAAGTCATAAAACAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR GCA 72 bp GTCATTCTAAGTGGACATAAAACCCAGGGATTGGAGTaGTCACTTTCACATGACACCAGTAATTGTTGTGTG +
Preference number: 3 (lower is better)
Translates to: VILSGHKTQGLE*SLSHDTSNCCV
Trigger: CACACAACAATTACTGGTGTCATGTGAAAGTGAGCACTCCAATCCCTGGGTTTTATGTCCACTTAGAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CAA 90 bp ATGAAGGCTTACGGACTTGTGAAGTTGCCGATTCTGTTACAAGTCAATGCACTCAAGGAGGAGGATAATTaGAGAATAAAGTCCTCAGGT +
Preference number: 3 (lower is better)
Translates to: MKAYGLVKLPILLQVNALKEEDN*RIKSSG
Trigger: ACCTGAGGACTTTATTCTCAAATTATCCTCCTCCTT...GAGTGCATTGACTTGTAACAGAATCGGCAACTTCACAAGTCCGTAAGCCTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR TCA 72 bp ACCACAAAGATCCCATGCCACAATGTCCTTGTTTTATaGCTTAGAAAATCTGAGGTCCAGAAGAGTTGGTTG +
Preference number: 3 (lower is better)
Translates to: TTKIPCHNVLVL*LRKSEVQKSWL
Trigger: CAACCAACTCTTCTGGACCTCAGATTTTCTAAGTCATAAAACAAGGACATTGTGGCATGGGATCTTTGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR-3UTR CAA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTTTCTGGGTCATCTTGTaGGTGTTTCGTTCTCCATGG +
Preference number: 3 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESFWVIL*VFRSPW
Trigger: CCATGGAGAACGAAACACCAACAAGATGACCCAGAA...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR GCA 72 bp AAATTAGAACCATTAACCAATCATGTCTGTGAAACTTaGCCTCAGCTGTTTAACTTGGCTCAGAGAAGAGCA +
Preference number: 3 (lower is better)
Translates to: KLEPLTNHVCET*PQLFNLAQRRA
Trigger: TGCTCTTCTCTGAGCCAAGTTAAACAGCTGAGGGCAAGTTTCACAGACATGATTGGTTAATGGTTCTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CCA 72 bp TTTCAAACCAGCAATCAAAACAGATGTTCAAAGTATTaGCACCCCTATGGGTGTAGAAGCTTCCAAGAACAT +
Preference number: 3 (lower is better)
Translates to: FQTSNQNRCSKY*HPYGCRSFQEH
Trigger: ATGTTCTTGGAAGCTTCTACACCCATAGGGGTGCCAATACTTTGAACATCTGTTTTGATTGCTGGTTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GTGGAGCAGGCAGTGGCCATGGACCAGAATCAGGTGGCCAGGAGAGACAGCAAGGGTGCCGAAGCCGGGTaGGCCGCCCAGAGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: VEQAVAMDQNQVARRDSKGAEAG*AAQRAG
Trigger: CCCGGCTCTCTGGGCGGCTCACCCGGCTTCGGCACC...CTTGCTGTCTCTCCTGGCCACCTGATTCTGGTCCATGGCCACTGCCTGCTCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GTGGAGCAGGCAGTGGCCATGGACCAGAATCAGGTGGCCAGGAGAGACAGCAAGGGACGGGGTGCCCGATaGGCCCAGCGCAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VEQAVAMDQNQVARRDSKGRGAR*AQRRAC
Trigger: GCAGGCTCTGCGCTGGGCTCATCGGGCACCCCGTCC...CTTGCTGTCTCTCCTGGCCACCTGATTCTGGTCCATGGCCACTGCCTGCTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GAGGGCTTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATGAAGGCAGCTTTCTCTaGGGTGGGGGCCCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: EGLGGRCPAEVLGERGPDEGSFL*GGGPEL
Trigger: GAGCTCCGGGCCCCCACCGCAGAGAAAGCTGCCTTC...ATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAAGCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GAAAGCAAACCCCAGCTCCCTCAGAGCAACCGCACCTATCCCCTGGCCCAGGTGCGGGATGCTCCGTGGTaGGGCTGGACTGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ESKPQLPQSNRTYPLAQVRDAPW*GWTGAA
Trigger: AGCAGCCCCAGTCCAGCCTCACCACGGAGCATCCCG...CACCTGGGCCAGGGGATAGGTGCGGTTGCTCTGAGGGAGCTGGGGTTTGCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATGGCTCACCCCTGTGGACTGAGTaGTGCCACAGCTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGGRCPAEVLGERGPDGSPLWTE*CHSWVV
Trigger: CACCACCCAGCTGTGGCATCACTCAGTCCACAGGGG...TGAGCCATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GAGGGCTTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATTCAGACTCTCCCGGCTaGTCTGGAGACTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: EGLGGRCPAEVLGERGPDSDSPG*SGDWGS
Trigger: AGAGCCCCAGTCTCCAGAGCAGCCGGGAGAGTCTGA...ATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAAGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATGGCTCAGTGGTGAGGCTGGACTaGGGCTGCTGCTGCGTGTCA +
Preference number: 4 (lower is better)
Translates to: LGGRCPAEVLGERGPDGSVVRLD*GCCCVS
Trigger: TGACACGCAGCAGCAGCCCCAGTCCAGCCTCACCAC...TGAGCCATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCGCCTCGGGGAGCCCATaGGTCTGGGCTTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LILLSWVLPAQRAWEGGVASGSP*VWACPP
Trigger: TGGAGGGCAAGCCCAGACCCATGGGCTCCCCGAGGC...GACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATGGCTCAGGGACTCATTCCAACTaGGGGAGTGCGCACGTCGGG +
Preference number: 4 (lower is better)
Translates to: LGGRCPAEVLGERGPDGSGTHSN*GSAHVG
Trigger: CCCGACGTGCGCACTCCCCCAGTTGGAATGAGTCCC...TGAGCCATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATGGCTCACTGTGTTGGAGATGGTaGCCATGGCCTTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: LGGRCPAEVLGERGPDGSLCWRW*PWPCPP
Trigger: CGGTGGGCAAGGCCATGGTCACCATCTCCAACACAG...TGAGCCATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCTACACGCCTGGGGACTaGCCGTCCTGTAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LILLSWVLPAQRAWEGGVYTPGD*PSCRLP
Trigger: GGGCAGCCTACAGGACGGGCAGTCCCCAGGCGTGTA...GACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GAAAGCAAACCCCAGCTCCCTCAGAGCAACCGCACCTATCCCCTGGCCCAGGTGCGCGTAGCTGCTGGCTaGGGCCGAGATGTGTGCGAT +
Preference number: 4 (lower is better)
Translates to: ESKPQLPQSNRTYPLAQVRVAAG*GRDVCD
Trigger: ATCGCACACATCTCGGCCGCAGCCAGCAGCTACGCG...CACCTGGGCCAGGGGATAGGTGCGGTTGCTCTGAGGGAGCTGGGGTTTGCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GAGGGCTTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATAGCGGACCCCTGTGCTaGTGGCAGTTTTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: EGLGGRCPAEVLGERGPDSGPLC*WQFSSQ
Trigger: CTGTGAGGAAAACTGCCAGCAGCACAGGGGTCCGCT...ATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAAGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GAGGGCTTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATCTGGCCCACAGACTGTaGCAGGGACTTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: EGLGGRCPAEVLGERGPDLAHRL*QGLGGE
Trigger: TTCTCCACCAAGTCCCTGCCACAGTCTGTGGGCCAG...ATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAAGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp CTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCCCCCTGTGGACTGAGTaGTGCCACAGCTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LILLSWVLPAQRAWEGGVPLWTE*CHSWVV
Trigger: CACCACCCAGCTGTGGCATCACTCAGTCCACAGGGG...GACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CACTGGATGGCAGAAAACGATGCAACCCCAAGCCCGTGTGAGCCCAGAGAGTCGGGGTCTCCGCGTAGCTaGTGGCTGCGGCCGAGATGT +
Preference number: 4 (lower is better)
Translates to: HWMAENDATPSPCEPRESGSPRS*WLRPRC
Trigger: ACATCTCGGCCGCAGCCAGCAGCTACGCGGAGACCC...CGACTCTCTGGGCTCACACGGGCTTGGGGTTGCATCGTTTTCTGCCATCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTGCTGGCTGCAGCCTCTaGTGCCTCCCCCGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: AFSVPRGFPSFPPSTCWCAGCSL*CLPRPA
Trigger: AGCCGGCCGGGGGAGGCAGCAGAGGCTGCAGCCAGC...ACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATGGCTCATGCTCTCGTAGCCACTaGTGCCTCCGCTGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LGGRCPAEVLGERGPDGSCSRSH*CLRCGR
Trigger: TCTACCACAGCGGAGGCAGCAGTGGCTACGAGAGCA...TGAGCCATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTAGCCAGGGGAGCCGGTaGCGAAGCCGGGTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSSQGSR*RSRVSR
Trigger: GCGGCTCACCCGGCTTCGGCACCGGCTCCCCTGGCT...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTGGAGCAGGCAGTGGCCATGGACCAGAATCAGGTGGCCAGGAGAGACAGCAAGCAGCTTTCTCTGCGGTaGGGGCCCGGAGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: VEQAVAMDQNQVARRDSKQLSLR*GPGAHS
Trigger: AGAGTGAGCTCCGGGCCCCCACCGCAGAGAAAGCTG...CTTGCTGTCTCTCCTGGCCACCTGATTCTGGTCCATGGCCACTGCCTGCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATGGCTCAGGTTCCTTGCTTTCCTaGGCCTGGGATGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LGGRCPAEVLGERGPDGSGSLLS*AWDALG
Trigger: CCCCAAAGCATCCCAGGCCCAGGAAAGCAAGGAACC...TGAGCCATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCGGGCAGTCTTCCCCATaGCAGGTGGTAGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LILLSWVLPAQRAWEGGVGQSSP*QVVAPH
Trigger: GTGGGGAGCTACCACCTGCCATGGGGAAGACTGCCC...GACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CAGGTCCATGCACACATGTGTTATGAGGCTGAGGTGGGCCCTGAGCCCAGGACTGGAACCCTGTGGGGCTaGGACACTGCTGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QVHAHMCYEAEVGPEPRTGTLWG*DTAGCR
Trigger: CCTGCAGCCAGCAGTGTCCCAGCCCCACAGGGTTCC...AGTCCTGGGCTCAGGGCCCACCTCAGCCTCATAACACATGTGTGCATGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 72 bp CATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTaGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: HPVVLGVASTEG*GGRCPAEVLGE
Trigger: CTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCCCTCAACGGCTGAGATaGGGACTGAGAATCGGGCCC +
Preference number: 4 (lower is better)
Translates to: LILLSWVLPAQRAWEGGVPQRLR*GLRIGP
Trigger: GGGCCCGATTCTCAGTCCGCATCTCAGCCGTTGAGG...GACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GAAAGCAAACCCCAGCTCCCTCAGAGCAACCGCACCTATCCCCTGGCCCAGGTGTGCGGCCGAGATGTGTaGGATCATGGTGGTGCGACA +
Preference number: 4 (lower is better)
Translates to: ESKPQLPQSNRTYPLAQVCGRDV*DHGGAT
Trigger: TGTCGCACCACCATGATCGCACACATCTCGGCCGCA...CACCTGGGCCAGGGGATAGGTGCGGTTGCTCTGAGGGAGCTGGGGTTTGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CTGATATCCCACCCCTGGCTGTATCCATCACCCTTCCCTGGCCCATGTCTCTGCTGTGCTGGCTACTGCTaGCCGGGATGCTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LISHPWLYPSPFPGPCLCCAGYC*PGCSVV
Trigger: CACCACGGAGCATCCCGGGCAGCAGTAGCCAGCACA...GCAGAGACATGGGCCAGGGAAGGGTGATGGATACAGCCAGGGGTGGGATATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGCTCTGCCCGCAGCTGTaGACTCCTCGGGCCCGCACT +
Preference number: 4 (lower is better)
Translates to: VLHGNPMSPSPFPQPQGKLCPQL*TPRART
Trigger: AGTGCGGGCCCGAGGAGTGCACAGCTGCGGGCAGAG...CTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCATGGAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCGGGGGAGGAGAGGTCTaGAGGATCCCACTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LILLSWVLPAQRAWEGGVGGGEV*RIPLKL
Trigger: CAGCTTCAGTGGGATCCTGCAGACCTCTCCTCCCCC...GACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GAGGGCTTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATGCTGTGTGCCACAGATaGGGTCTTCACAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: EGLGGRCPAEVLGERGPDAVCHR*GLHRGT
Trigger: TGTACCTCTGTGAAGACCCCATCTGTGGCACACAGC...ATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAAGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CACTGGATGGCAGAAAACGATGCAACCCCAAGCCCGTGTGAGCCCAGAGAGTCGCGCTGGGCGGTAGGTTaGAGCTCTGGCCCACAGACT +
Preference number: 4 (lower is better)
Translates to: HWMAENDATPSPCEPRESRWAVG*SSGPQT
Trigger: AGTCTGTGGGCCAGAGCTCCAACCTACCGCCCAGCG...CGACTCTCTGGGCTCACACGGGCTTGGGGTTGCATCGTTTTCTGCCATCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GAGGGCTTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATTCAGCCACTCGTACTTaGCTCGGACTTCAGCGATTC +
Preference number: 4 (lower is better)
Translates to: EGLGGRCPAEVLGERGPDSATRT*LGLQRF
Trigger: GAATCGCTGAAGTCCGAGCCAAGTACGAGTGGCTGA...ATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAAGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATGGCTCAAGCATTCGTAGTGGCTaGCTGTTGTCCTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LGGRCPAEVLGERGPDGSSIRSG*LLSCQE
Trigger: CTCTTGGCAGGACAACAGTCAGCCACTACGAATGCT...TGAGCCATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATGGCTCAGAATGGCCACCGAGTTaGGGATGTTTCCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: LGGRCPAEVLGERGPDGSEWPPS*GCFHCW
Trigger: CCAGCAATGGAAACATCCTCAACTCGGTGGCCATTC...TGAGCCATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GAGGGCTTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATTCATACAAGGTGATCTaGTTCTTCCGTGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: EGLGGRCPAEVLGERGPDSYKVI*FFRGST
Trigger: GGTGGACCCACGGAAGAAGCAGATCACCTTGTATGA...ATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAAGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CTGATATCCCACCCCTGGCTGTATCCATCACCCTTCCCTGGCCCATGTCTCTGCCTGCCTCTGAGCTGCTaGTGCTCAGCCTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LISHPWLYPSPFPGPCLCLPLSC*CSACCL
Trigger: CAGGCAACAGGCTGAGCAGCAGCAGCTCAGAGGCAG...GCAGAGACATGGGCCAGGGAAGGGTGATGGATACAGCCAGGGGTGGGATATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCCTGTGCCTTGGAGGCTaGAAGCTCTGTGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LILLSWVLPAQRAWEGGVLCLGG*KLCAFP
Trigger: AGGGAAGGCACAGAGCTTCCAGCCTCCAAGGCACAG...GACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCGACAAACTCCGAGGCTaGGGGTTCTGCCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: LILLSWVLPAQRAWEGGVDKLRG*GFCHGF
Trigger: GAAGCCATGGCAGAACCCCCAGCCTCGGAGTTTGTC...GACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTCGCTCAGCCAGGAGCTaGTGGAGGAACGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSRSARS*WRNAGC
Trigger: GCAGCCGGCGTTCCTCCATCAGCTCCTGGCTGAGCG...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGCTGCCACCACCGTGTTaGGGGCTGGCCCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VLHGNPMSPSPFPQPQGKLPPPC*GLALFF
Trigger: GAAGAACAGGGCCAGCCCTCAACACGGTGGTGGCAG...CTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCATGGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCGCCCGTCCTGTAGGCTaGCCGTGGCCACCTCAGACA +
Preference number: 4 (lower is better)
Translates to: ETSPFAPRSLQTCYQPSSARPVG*PWPPQT
Trigger: TGTCTGAGGTGGCCACGGGCAGCCTACAGGACGGGC...GGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCGAAGGCAGCTTTCTCTaGGGTGGGGGCCCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: ETSPFAPRSLQTCYQPSSEGSFL*GGGPEL
Trigger: GAGCTCCGGGCCCCCACCGCAGAGAAAGCTGCCTTC...GGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCTGTCAGACAGGGCTGTaGCATTGGGCCCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: LILLSWVLPAQRAWEGGVCQTGL*HWARCR
Trigger: TCTACATCGGGCCCAATGGCACAGCCCTGTCTGACA...GACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TCTACAGGGGCTGAGTGGAGACCCAGTTGGAGGAGGCTGGATCCTTTGTTAGGAAGCTGGGAGGTACTGTaGTGGCTACTGCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: STGAEWRPSWRRLDPLLGSWEVL*WLLLPG
Trigger: CCCGGGCAGCAGTAGCCAGCACAGTACCTCCCAGCT...TCCTAACAAAGGATCCAGCCTCCTCCAACTGGGTCTCCACTCAGCCCCTGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CATGCCAACTTGAAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTGCCTGCTGAGGTGAGGCGCCAGTGCTaGGACCCAGGCTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: HANLKGRALSQSLWLPAEVRRQC*DPGSSQ
Trigger: CTGGGAGGAGCCTGGGTCGCAGCACTGGCGCCTCAC...CTCAGCAGGCAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTGGGAGCCCATGGGTCTaGGCTTGCCCTCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSGSPWV*ACPPRS
Trigger: GCTTCGTGGAGGGCAAGCCCAGACCCATGGGCTCCC...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TCTACAGGGGCTGAGTGGAGACCCAGTTGGAGGAGGCTGGATCCTTTGTTAGGAGGGACTCATTCCAACTaGGGGAGTGCGCACGTCGGG +
Preference number: 4 (lower is better)
Translates to: STGAEWRPSWRRLDPLLGGTHSN*GSAHVG
Trigger: CCCGACGTGCGCACTCCCCCAGTTGGAATGAGTCCC...TCCTAACAAAGGATCCAGCCTCCTCCAACTGGGTCTCCACTCAGCCCCTGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TCTACAGGGGCTGAGTGGAGACCCAGTTGGAGGAGGCTGGATCCTTTGTTAGGAGGGCAGTCTTCCCCATaGCAGGTGGTAGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: STGAEWRPSWRRLDPLLGGQSSP*QVVAPH
Trigger: GTGGGGAGCTACCACCTGCCATGGGGAAGACTGCCC...TCCTAACAAAGGATCCAGCCTCCTCCAACTGGGTCTCCACTCAGCCCCTGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GAGGGCTTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATGTGATCATCATGAGATaGGCCTTGCAGAAGTTGACG +
Preference number: 4 (lower is better)
Translates to: EGLGGRCPAEVLGERGPDVIIMR*ALQKLT
Trigger: CGTCAACTTCTGCAAGGCCCATCTCATGATGATCAC...ATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAAGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CACTGGATGGCAGAAAACGATGCAACCCCAAGCCCGTGTGAGCCCAGAGAGTCGGAGACCCCACCAGTGTaGGAATGCTGGAGATCGGAG +
Preference number: 4 (lower is better)
Translates to: HWMAENDATPSPCEPRESETPPV*ECWRSE
Trigger: CTCCGATCTCCAGCATTCCCACACTGGTGGGGTCTC...CGACTCTCTGGGCTCACACGGGCTTGGGGTTGCATCGTTTTCTGCCATCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTCGGGATGCTCCGTGGTaGGGCTGGACTGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLRDAPW*GWTGAA
Trigger: AGCAGCCCCAGTCCAGCCTCACCACGGAGCATCCCG...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTGAGGCAGGAACTGCGTaGTGCTCACCTCGGAGACGG +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSEAGTA*CSPRRR
Trigger: CCGTCTCCGAGGTGAGCATCACGCAGTTCCTGCCTC...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GTGCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGAGGCAGGAACTGCGTaGTGCTCACCTCGGAGACGG +
Preference number: 4 (lower is better)
Translates to: VLSQSHGASHHFLLPHVGEAGTA*CSPRRR
Trigger: CCGTCTCCGAGGTGAGCATCACGCAGTTCCTGCCTC...ACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp CACTGGATGGCAGAAAACGATGCAACCCCAAGCCCGTGTGAGCCCAGAGAGTCGTATGAAGCTGTGGCATaGCTGCTCGCCATCACTGCC +
Preference number: 4 (lower is better)
Translates to: HWMAENDATPSPCEPRESYEAVA*LLAITA
Trigger: GGCAGTGATGGCGAGCAGTCATGCCACAGCTTCATA...CGACTCTCTGGGCTCACACGGGCTTGGGGTTGCATCGTTTTCTGCCATCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCTCAAAAGGCGGCTGCCTCTaGGCTGCTGCTGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TSPFAPRSLQTCYQPSSSKGGCL*AAAAQP
Trigger: AGGCTGAGCAGCAGCAGCTCAGAGGCAGCCGCCTTT...TGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp CACTGGATGGCAGAAAACGATGCAACCCCAAGCCCGTGTGAGCCCAGAGAGTCGTGCCTGTCAGCTTTCTaGAATGCCCTTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HWMAENDATPSPCEPRESCLSAF*NALGRL
Trigger: CAGCCTCCCAAGGGCATTTCAGAAAGCTGACAGGCA...CGACTCTCTGGGCTCACACGGGCTTGGGGTTGCATCGTTTTCTGCCATCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGGGGTCTCCGCGTAGCTaGTGGCTGCGGCCGAGATGT +
Preference number: 4 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLGSPRS*WLRPRC
Trigger: ACATCTCGGCCGCAGCCAGCAGCTACGCGGAGACCC...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CAGGTCCATGCACACATGTGTTATGAGGCTGAGGTGGGCCCTGAGCCCAGGACTTGGGCCTGCGCATTCTaGCTTCCTCACAGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: QVHAHMCYEAEVGPEPRTWACAF*LPHRSF
Trigger: AAAGCTCCTGTGAGGAAGGCAGAATGCGCAGGCCCA...AGTCCTGGGCTCAGGGCCCACCTCAGCCTCATAACACATGTGTGCATGGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGTCAGCTGGGTGGGCCTaGGCATTCTGCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: VLHGNPMSPSPFPQPQGKSAGWA*AFCLPH
Trigger: GTGAGGAAGGCAGAATGCGCAGGCCCACCCAGCTGA...CTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCATGGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCCATCATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAGCTGGCTGCAGCCTCTaGTGCCTCCCCCGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PIISSFHMLVSVPFFPMAAGCSL*CLPRPA
Trigger: AGCCGGCCGGGGGAGGCAGCAGAGGCTGCAGCCAGC...TGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCTACTGCTGCCCGGGATaGTCCGTGGTGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: ETSPFAPRSLQTCYQPSSYCCPG*SVVRLD
Trigger: GTCCAGCCTCACCACGGAGCATCCCGGGCAGCAGTA...GGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGTACTGTGCTGGCTACTaGTGCCCGGGATGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: VLHGNPMSPSPFPQPQGKYCAGY*CPGCSV
Trigger: CACGGAGCATCCCGGGCAGCAGTAGCCAGCACAGTA...CTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCATGGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCAGCTGGGAGGTACTGTaGTGGCTACTGCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GNIAFRSTLTPDLLPTFISWEVL*WLLLPG
Trigger: CCCGGGCAGCAGTAGCCAGCACAGTACCTCCCAGCT...GATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATCCATGCCCACAGGGCAGATGCTTTTCTTGCTCAAAGTTTGGATGGAACTCCCTGGAGGAACGCCGGCTaGCCGCGTCCCGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: IHAHRADAFLAQSLDGTPWRNAG*PRPEPS
Trigger: AGAAGGCTCGGGACGCGGGCAGCCGGCGTTCCTCCA...GGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAAGCTGTGGCATGACTaGTCGCCATCACTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: VLHGNPMSPSPFPQPQGKKLWHD*SPSLPA
Trigger: CGCGGGCAGTGATGGCGAGCAGTCATGCCACAGCTT...CTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCATGGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp AGAGCACGAGACTCCGAAGACCAGAGAAGGTGGCTGTTCCTCAAGGATGTGGGATGCTGCTCAGCCTGTTaGCTGAGCTGGGCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RARDSEDQRRWLFLKDVGCCSAC*LSWACH
Trigger: ATGGCAGGCCCAGCTCAGGCAACAGGCTGAGCAGCA...TCCCACATCCTTGAGGAACAGCCACCTTCTCTGGTCTTCGGAGTCTCGTGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TCTACAGGGGCTGAGTGGAGACCCAGTTGGAGGAGGCTGGATCCTTTGTTAGGACCTCTGAGCTGCTGCTaGTCAGCCTGTTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: STGAEWRPSWRRLDPLLGPLSCC*SACCLS
Trigger: GCTCAGGCAACAGGCTGAGCAGCAGCAGCTCAGAGG...TCCTAACAAAGGATCCAGCCTCCTCCAACTGGGTCTCCACTCAGCCCCTGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCGGGGGCTGCTGGTGTTaGTGCTGCCACCACCGTGTT +
Preference number: 4 (lower is better)
Translates to: GNIAFRSTLTPDLLPTFIGGCWC*CCHHRV
Trigger: AACACGGTGGTGGCAGCAGCAACACCAGCAGCCCCC...GATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CACTGGATGGCAGAAAACGATGCAACCCCAAGCCCGTGTGAGCCCAGAGAGTCGTCCAGGGAATCCAGCTaGAGGACCTGCTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: HWMAENDATPSPCEPRESSRESS*RTCSKS
Trigger: TGACTTGGAGCAGGTCCTGCAGCTGGATTCCCTGGA...CGACTCTCTGGGCTCACACGGGCTTGGGGTTGCATCGTTTTCTGCCATCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CAGGTCCATGCACACATGTGTTATGAGGCTGAGGTGGGCCCTGAGCCCAGGACTAGCAGCTTGAGAGCCTaGCTCTTCAGCTCCACCAAG +
Preference number: 4 (lower is better)
Translates to: QVHAHMCYEAEVGPEPRTSSLRA*LFSSTK
Trigger: CTTGGTGGAGCTGAAGAGGCAGGCTCTCAAGCTGCT...AGTCCTGGGCTCAGGGCCCACCTCAGCCTCATAACACATGTGTGCATGGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GAGGCCTGTAGACAATGCCTGACCATTCCATGCTTCAGTCCTATCTCCCTAACAGCCCACTCCCTGGGCTaGTGGAGCCCACCCATGTGG +
Preference number: 4 (lower is better)
Translates to: EACRQCLTIPCFSPISLTAHSLG*WSPPMW
Trigger: CCACATGGGTGGGCTCCAGCAGCCCAGGGAGTGGGC...TGTTAGGGAGATAGGACTGAAGCATGGAATGGTCAGGCATTGTCTACAGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGCCTGTAGGCTGCCCGTaGCCACCTCAGACAACAGGT +
Preference number: 4 (lower is better)
Translates to: VLHGNPMSPSPFPQPQGKPVGCP*PPQTTG
Trigger: ACCTGTTGTCTGAGGTGGCCACGGGCAGCCTACAGG...CTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCATGGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCGTGGTGAGGCTGGACTaGGGCTGCTGCTGCGTGTCA +
Preference number: 4 (lower is better)
Translates to: ETSPFAPRSLQTCYQPSSVVRLD*GCCCVS
Trigger: TGACACGCAGCAGCAGCCCCAGTCCAGCCTCACCAC...GGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCGCTGGGCGGTAGGTTaGAGCTCTGGCCCACAGACT +
Preference number: 4 (lower is better)
Translates to: GNIAFRSTLTPDLLPTFIRWAVG*SSGPQT
Trigger: AGTCTGTGGGCCAGAGCTCCAACCTACCGCCCAGCG...GATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCTCAGCCACTCGTACTTaGCTCGGACTTCAGCGATTC +
Preference number: 4 (lower is better)
Translates to: LILLSWVLPAQRAWEGGVSATRT*LGLQRF
Trigger: GAATCGCTGAAGTCCGAGCCAAGTACGAGTGGCTGA...GACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTGGACTGGTGGCCATCTaGAGGCTGACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSGLVAI*RLTLAW
Trigger: CCAGGCCAAGGTCAGCCTCCAGATGGCCACCAGTCC...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 72 bp CTACCAACCTTCATCCTCATCCTGTTGTCTTGGGTGTaGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LPTFILILLSWV*PAQRAWEGGVL
Trigger: CAGGACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAGGATGAAGGTTGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp CACTGGATGGCAGAAAACGATGCAACCCCAAGCCCGTGTGAGCCCAGAGAGTCGGGGGATCATACAAGGTaGTCTGCTTCTTCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: HWMAENDATPSPCEPRESGDHTR*SASSVG
Trigger: ACCCACGGAAGAAGCAGATCACCTTGTATGATCCCC...CGACTCTCTGGGCTCACACGGGCTTGGGGTTGCATCGTTTTCTGCCATCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCTCACTGTGTTGGAGATGGTaGCCATGGCCTTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: TSPFAPRSLQTCYQPSSSLCWRW*PWPCPP
Trigger: CGGTGGGCAAGGCCATGGTCACCATCTCCAACACAG...TGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTCCGAGGTCGATGAGATaGAGGCGGCTTCGACCTCCA +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSPRSMR*RRLRPP
Trigger: TGGAGGTCGAAGCCGCCTGCATCTCATCGACCTCGG...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GTGCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGCCATGGCTTCCCCATaGCCAAAGCACGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VLSQSHGASHHFLLPHVGAMASP*PKHVWA
Trigger: AGCCCAGACGTGCTTTGGGCATGGGGAAGCCATGGC...ACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GCCAACTTGAAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTGCCTGCTGAGATTCGAGGCTGGGGGTTCTaGCATGGCTTCCCCATGCCC +
Preference number: 4 (lower is better)
Translates to: ANLKGRALSQSLWLPAEIRGWGF*HGFPMP
Trigger: GGGCATGGGGAAGCCATGGCAGAACCCCCAGCCTCG...AATCTCAGCAGGCAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGCCTCGGGCTTCTCTCTaGACACCACTGCCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: VLHGNPMSPSPFPQPQGKPRASL*TPLPCS
Trigger: AGAACACGGCAGTGGTGTGCAGAGAGAAGCCCGAGG...CTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCATGGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGCCAGGCTCCTCCCAGTaGGGGGCATGGTACTATCTT +
Preference number: 4 (lower is better)
Translates to: VLHGNPMSPSPFPQPQGKPGSSQ*GAWYYL
Trigger: AAGATAGTACCATGCCCCGCACTGGGAGGAGCCTGG...CTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCATGGAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCTGTTATCACTACCGTaGCCGCTGCTGCAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GNIAFRSTLTPDLLPTFILLSLP*PLLQRC
Trigger: GCACCGCTGCAGCAGCGGGCACGGTAGTGATAACAG...GATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCGCCCGGAGCTCACTCTaGTTCTGCAGCTGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GNIAFRSTLTPDLLPTFIARSSL*FCSCVP
Trigger: TGGCACACAGCTGCAGAACCAGAGTGAGCTCCGGGC...GATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGTTGGCCTCTTGCTACTGGACAGGACACTGGATGGCAGAAAACGATGCAACCCGCCCGGAGCTCACTCTaGTTCTGCAGCTGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SWPLATGQDTGWQKTMQPARSSL*FCSCVP
Trigger: TGGCACACAGCTGCAGAACCAGAGTGAGCTCCGGGC...GGGTTGCATCGTTTTCTGCCATCCAGTGTCCTGTCCAGTAGCAAGAGGCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTTGGAAGGGTCTCAGCTaGGTGGGCCTGCGCATTCTG +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSWKGLS*VGLRIL
Trigger: CAGAATGCGCAGGCCCACCCAGCTGAGACCCTTCCA...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCTCATGGAAGGGTCTCAGCTaGGTGGGCCTGCGCATTCTG +
Preference number: 4 (lower is better)
Translates to: TSPFAPRSLQTCYQPSSSWKGLS*VGLRIL
Trigger: CAGAATGCGCAGGCCCACCCAGCTGAGACCCTTCCA...TGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCTGGGAGGTACTGTGCTaGCTACTGCTGCCCGGGATG +
Preference number: 4 (lower is better)
Translates to: GNIAFRSTLTPDLLPTFIWEVLC*LLLPGM
Trigger: CATCCCGGGCAGCAGTAGCCAGCACAGTACCTCCCA...GATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCGAAGCAAGGATTCACTaGAGACCATGCCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LILLSWVLPAQRAWEGGVEARIH*RPCQSP
Trigger: AGGACTCTGGCATGGTCTCCAGTGAATCCTTGCTTC...GACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGAGCACGAGACTCCGAAGACCAGAGAAGGTGGCTGTTCCTCAAGGATGTGGGAATCCAGGCCCAGCTTTaGGAGAGGCAGGAACTGCGT +
Preference number: 4 (lower is better)
Translates to: RARDSEDQRRWLFLKDVGIQAQL*ERQELR
Trigger: ACGCAGTTCCTGCCTCTCCCAAAGCTGGGCCTGGAT...TCCCACATCCTTGAGGAACAGCCACCTTCTCTGGTCTTCGGAGTCTCGTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CTGATATCCCACCCCTGGCTGTATCCATCACCCTTCCCTGGCCCATGTCTCTGCACCACTGCCGTGTTCTaGATGCTGCTGACAAACTCC +
Preference number: 4 (lower is better)
Translates to: LISHPWLYPSPFPGPCLCTTAVF*MLLTNS
Trigger: GGAGTTTGTCAGCAGCATCCAGAACACGGCAGTGGT...GCAGAGACATGGGCCAGGGAAGGGTGATGGATACAGCCAGGGGTGGGATATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTACATGGAGGGGACTTTaGGCCACCAAGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSTWRGL*ATKPGR
Trigger: CCTGCCTGGCTTGGTGGCCCAAAGTCCCCTCCATGT...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TCTACAGGGGCTGAGTGGAGACCCAGTTGGAGGAGGCTGGATCCTTTGTTAGGAGCGCTGAGGGCTTGGTaGGCGAGCACATTTCGTTCA +
Preference number: 4 (lower is better)
Translates to: STGAEWRPSWRRLDPLLGALRAW*ASTFRS
Trigger: TGAACGAAATGTGCTCGCCCACCAAGCCCTCAGCGC...TCCTAACAAAGGATCCAGCCTCCTCCAACTGGGTCTCCACTCAGCCCCTGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 72 bp AGACTTGCTACCAACCTTCATCCTCATCCTGTTGTCTaGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: RLATNLHPHPVV*GVASTEGLGGR
Trigger: CCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAGGATGAAGGTTGGTAGCAAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CAA 72 bp GCTGAGTGGAGACCCAGTTGGAGGAGGCTGGATCCTTaGTTAGGAAGGCAAAGGCCCGGGGAACCTGATTTC +
Preference number: 4 (lower is better)
Translates to: AEWRPSWRRLDP*LGRQRPGEPDF
Trigger: GAAATCAGGTTCCCCGGGCCTTTGCCTTCCTAACAAAGGATCCAGCCTCCTCCAACTGGGTCTCCACTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTGCCGATTCTGTTACAAGTCAATGCACTCGGGCAGGCCTCGTCTCCAATTTCCGACTGGGGCTCTGTGTaGGCTGGGAGGTACTGTGCT +
Preference number: 4 (lower is better)
Translates to: LPILLQVNALGQASSPISDWGSV*AGRYCA
Trigger: AGCACAGTACCTCCCAGCTCACACAGAGCCCCAGTC...GGAAATTGGAGACGAGGCCTGCCCGAGTGCATTGACTTGTAACAGAATCGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGACGGGCCGGGAGCCTaGGGCCAGGGCCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKDGPGA*GQGLHG
Trigger: TCCGTGCAGGCCCTGGCCTCAGGCTCCCGGCCCGTC...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTTCAAACCAGCAATCAAAACAGATGTTCAAAGTATTGGCACCCCTATGGGTGTGACGGGCCGGGAGCCTaGGGCCAGGGCCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: FQTSNQNRCSKYWHPYGCDGPGA*GQGLHG
Trigger: TCCGTGCAGGCCCTGGCCTCAGGCTCCCGGCCCGTC...ACACCCATAGGGGTGCCAATACTTTGAACATCTGTTTTGATTGCTGGTTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCTCAGAGACAGTGCTGGAATaGGCCTCCGTCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: TSPFAPRSLQTCYQPSSSETVLE*ASVSGN
Trigger: GTTCCCAGAGACGGAGGCTCATTCCAGCACTGTCTC...TGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp CATGCCAACTTGAAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTGCCTGCTGAGGAAGGAAGCGGCCACTaGGGTCCCTGTGGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: HANLKGRALSQSLWLPAEEGSGH*GPCGSL
Trigger: GAGACTTCCACAGGGACCTCAGTGGCCGCTTCCTTC...CTCAGCAGGCAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTCCTGAGGCCAGGGCCTaGACGGAGCAGTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLPEARA*TEQSLL
Trigger: CAACAGTGACTGCTCCGTGCAGGCCCTGGCCTCAGG...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTGAGGACTCAGGCTCTTaGACGTTTCGGGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSEDSGS*TFRGLM
Trigger: CATGAGCCCCCGAAACGTGCAAGAGCCTGAGTCCTC...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGTGCTGCTCAGCCTGTTaGCTGAGCTGGGCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLCCSAC*LSWACH
Trigger: ATGGCAGGCCCAGCTCAGGCAACAGGCTGAGCAGCA...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCTCCCTCCCACGGAGCTaGTGTTCTCGCTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: ETSPFAPRSLQTCYQPSSSLPRS*CSRSWS
Trigger: ACTCCATGAGCGAGAACAGCAGCTCCGTGGGAGGGA...GGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATCCATGCCCACAGGGCAGATGCTTTTCTTGCTCAAAGTTTGGATGGAACTCCCTCTCCGCGTAGCTGCTaGCTGCGGCCGAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: IHAHRADAFLAQSLDGTPSPRSC*LRPRCV
Trigger: CACACATCTCGGCCGCAGCCAGCAGCTACGCGGAGA...GGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGTCGACGCGATCTGGATaGTGGACAGGGTCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLSTRSG*WTGSPR
Trigger: ACGCGGAGACCCTGTCCACCATCCAGATCGCGTCGA...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGAGGGTCTCAGCTGGGTaGGCCTGCGCATTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLRVSAG*ACAFCL
Trigger: AAGGCAGAATGCGCAGGCCCACCCAGCTGAGACCCT...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTAGGTCTTGGACAGACTaGCAATGCCTAGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSRSWTD*QCLASG
Trigger: CCCCGAGGCTAGGCATTGCCAGTCTGTCCAAGACCT...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCAGACGGGGGCCATGCTaGAGTAGCACTCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: GNIAFRSTLTPDLLPTFIRRGPC*SSTPDP
Trigger: AGGATCTGGAGTGCTACTCCAGCATGGCCCCCGTCT...GATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTCTGGGGGTTCTGCCATaGCTTCCCCATGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSLGVLP*LPHAQS
Trigger: GCTTTGGGCATGGGGAAGCCATGGCAGAACCCCCAG...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCGACAAACTCCGAGGCTaGGGGTTCTGCCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: ETSPFAPRSLQTCYQPSSDKLRG*GFCHGF
Trigger: GAAGCCATGGCAGAACCCCCAGCCTCGGAGTTTGTC...GGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTCGTTTCGGGGGCTCATaGCGATGCAGGGGTAAACGG +
Preference number: 4 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSRFGGS*RCRGKR
Trigger: CCGTTTACCCCTGCATCGCCATGAGCCCCCGAAACG...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGGGCTCACCTTTGGGGTaGCAGTGGAGGACTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLGSPLG*QWRTQA
Trigger: AGCCTGAGTCCTCCACTGCCACCCCAAAGGTGAGCC...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCGGTTCCTTGCTTTCCTaGGCCTGGGATGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ETSPFAPRSLQTCYQPSSGSLLS*AWDALG
Trigger: CCCCAAAGCATCCCAGGCCCAGGAAAGCAAGGAACC...GGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTGCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTAGCCAAGAAGGTAGCTaGCTGGTTCAGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VLSQSHGASHHFLLPHVGSQEGS*LVQGAA
Trigger: AGCAGCCCCCTGAACCAGCCAGCTACCTTCTTGGCT...ACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGTTGGCCTCTTGCTACTGGACAGGACACTGGATGGCAGAAAACGATGCAACCCAGCCAAGAAGGTAGCTaGCTGGTTCAGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SWPLATGQDTGWQKTMQPSQEGS*LVQGAA
Trigger: AGCAGCCCCCTGAACCAGCCAGCTACCTTCTTGGCT...GGGTTGCATCGTTTTCTGCCATCCAGTGTCCTGTCCAGTAGCAAGAGGCCAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGTTTTGGTGGTGGAGGTaGACAGGCTGCTGCGGGATT +
Preference number: 4 (lower is better)
Translates to: VLHGNPMSPSPFPQPQGKFWWWR*TGCCGI
Trigger: AATCCCGCAGCAGCCTGTCCACCTCCACCACCAAAA...CTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCATGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGAGCACGAGACTCCGAAGACCAGAGAAGGTGGCTGTTCCTCAAGGATGTGGGATTCCTGCTGAGCGACTaGGTGGACCAGGACATGTGT +
Preference number: 4 (lower is better)
Translates to: RARDSEDQRRWLFLKDVGFLLSD*VDQDMC
Trigger: ACACATGTCCTGGTCCACCCAGTCGCTCAGCAGGAA...TCCCACATCCTTGAGGAACAGCCACCTTCTCTGGTCTTCGGAGTCTCGTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CATGCCAACTTGAAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTGCCTGCTGAGGGGCTGGGACACTGCTaGCTGCAGGCTTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: HANLKGRALSQSLWLPAEGLGHC*LQACQH
Trigger: ATGCTGACAAGCCTGCAGCCAGCAGTGTCCCAGCCC...CTCAGCAGGCAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 72 bp GCCATGGAGGCTTTAGGACAGGGGAGAGTTGGCCTCTaGCTACTGGACAGGACACTGGATGGCAGAAAACGA +
Preference number: 4 (lower is better)
Translates to: AMEALGQGRVGL*LLDRTLDGRKR
Trigger: TCGTTTTCTGCCATCCAGTGTCCTGTCCAGTAGCAAGAGGCCAACTCTCCCCTGTCCTAAAGCCTCCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTTCACCACAGACTGGATaGCTTCGGCCACAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSSPQTG*LRPQFQ
Trigger: CTGGAACTGTGGCCGAAGTCATCCAGTCTGTGGTGA...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTGTGCGCACGTCGGGCTaGAGCAAGGATTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLVRTSG*SKDSLE
Trigger: CTCCAGTGAATCCTTGCTTCAGCCCGACGTGCGCAC...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GTGCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTTATGAAGCTGTGGCATaGCTGCTCGCCATCACTGCC +
Preference number: 4 (lower is better)
Translates to: VLSQSHGASHHFLLPHVGYEAVA*LLAITA
Trigger: GGCAGTGATGGCGAGCAGTCATGCCACAGCTTCATA...ACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp CAGGTCCATGCACACATGTGTTATGAGGCTGAGGTGGGCCCTGAGCCCAGGACTATCCAGTTCCTGCTCTaGCTTACCTTCAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QVHAHMCYEAEVGPEPRTIQFLL*LTFSLQ
Trigger: CTGAAGACTGAAGGTAAGTCAGAGCAGGAACTGGAT...AGTCCTGGGCTCAGGGCCCACCTCAGCCTCATAACACATGTGTGCATGGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCGTTCCAGCTTGGCGCTaGAGAGCTTACTGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: GNIAFRSTLTPDLLPTFIVPAWR*RAYCCY
Trigger: GTAGCAGCAGTAAGCTCTTCAGCGCCAAGCTGGAAC...GATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GCCAACTTGAAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTGCCTGCTGAGATTCCGAGGTCGATGAGATaGAGGCGGCTTCGACCTCCA +
Preference number: 4 (lower is better)
Translates to: ANLKGRALSQSLWLPAEIPRSMR*RRLRPP
Trigger: TGGAGGTCGAAGCCGCCTGCATCTCATCGACCTCGG...AATCTCAGCAGGCAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GAGGCCTGTAGACAATGCCTGACCATTCCATGCTTCAGTCCTATCTCCCTAACATCAGCTGGGTGGGCCTaGGCATTCTGCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: EACRQCLTIPCFSPISLTSAGWA*AFCLPH
Trigger: GTGAGGAAGGCAGAATGCGCAGGCCCACCCAGCTGA...TGTTAGGGAGATAGGACTGAAGCATGGAATGGTCAGGCATTGTCTACAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GAGGCCTGTAGACAATGCCTGACCATTCCATGCTTCAGTCCTATCTCCCTAACACCATGCCAGAGTCCTTaGTCAGGGAAGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: EACRQCLTIPCFSPISLTPCQSP*SGKVVG
Trigger: CCCCACCACCTTCCCTGAGCAAGGACTCTGGCATGG...TGTTAGGGAGATAGGACTGAAGCATGGAATGGTCAGGCATTGTCTACAGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGGAATGGAGGAACGCCGGCTaGCCGCGTCCCGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PPSTCWCLYLSFLWQTKEWRNAG*PRPEPS
Trigger: AGAAGGCTCGGGACGCGGGCAGCCGGCGTTCCTCCA...TTCCTTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTCCTCGGGCTTCTCTCTaGACACCACTGCCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSPRASL*TPLPCS
Trigger: AGAACACGGCAGTGGTGTGCAGAGAGAAGCCCGAGG...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTGAGGACTCAGGCTCTTaGACGTTTCGGGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSEDSGS*TFRGLM
Trigger: CATGAGCCCCCGAAACGTGCAAGAGCCTGAGTCCTC...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTGGTCCCTTTGGGCCTTaGCAGGACGCAATGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLGPFGP*QDAMLG
Trigger: CCCAAGCATTGCGTCCTGGCAAGGCCCAAAGGGACC...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GTGCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTCGCTGTCTCTCATCATaGTCTCGTAGCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VLSQSHGASHHFLLPHVGRCLSS*SRSHCC
Trigger: GCAGCAGTGGCTACGAGAGCATGATGAGAGACAGCG...ACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGTGTCACACCCTCCAGTaGCTCCAGGTACTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLCHTLQ*LQVLQG
Trigger: TCCCTGGAGTACCTGGAGGCACTGGAGGGTGTGACA...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTTCACCCCGTATTTCTTaGCCCTGGTGGAGACCGCAA +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSSPRIS*PWWRPQ
Trigger: TTGCGGTCTCCACCAGGGGCAAGAAATACGGGGTGA...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CAGGTCCATGCACACATGTGTTATGAGGCTGAGGTGGGCCCTGAGCCCAGGACTATCTTCGGAGGAACCTaGCTGCTTCTTTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QVHAHMCYEAEVGPEPRTIFGGT*LLLFWK
Trigger: CTTCCAGAAAAGAAGCAGCCAGGTTCCTCCGAAGAT...AGTCCTGGGCTCAGGGCCCACCTCAGCCTCATAACACATGTGTGCATGGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GCCAACTTGAAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTGCCTGCTGAGATTCCTGTAGGCTGCCCGTaGCCACCTCAGACAACAGGT +
Preference number: 4 (lower is better)
Translates to: ANLKGRALSQSLWLPAEIPVGCP*PPQTTG
Trigger: ACCTGTTGTCTGAGGTGGCCACGGGCAGCCTACAGG...AATCTCAGCAGGCAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGACTCTCGACGCGATCTaGATGGTGGACAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLTLDAI*MVDRVS
Trigger: GGAGACCCTGTCCACCATCCAGATCGCGTCGAGAGT...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GAGGCCTGTAGACAATGCCTGACCATTCCATGCTTCAGTCCTATCTCCCTAACAAGGGTCTCAGCTGGGTaGGCCTGCGCATTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: EACRQCLTIPCFSPISLTRVSAG*ACAFCL
Trigger: AAGGCAGAATGCGCAGGCCCACCCAGCTGAGACCCT...TGTTAGGGAGATAGGACTGAAGCATGGAATGGTCAGGCATTGTCTACAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTCTGGGGGTTCTGCCATaGCTTCCCCATGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLLGVLP*LPHAQS
Trigger: GCTTTGGGCATGGGGAAGCCATGGCAGAACCCCCAG...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCTCACTGGCCCTGTTCTTCTaGTCCAAGCTAGACTTGCGG +
Preference number: 4 (lower is better)
Translates to: TSPFAPRSLQTCYQPSSSLALFF*SKLDLR
Trigger: CCGCAAGTCTAGCTTGGACCAGAAGAACAGGGCCAG...TGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTGAGAGTTGCTTCTGCTaGCCAGCTGTTCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AFSVPRGFPSFPPSTCWCESCFC*PAVPAW
Trigger: CCAAGCTGGAACAGCTGGCCAGCAGAAGCAACTCTC...ACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTGCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGAGAGTTGCTTCTGCTaGCCAGCTGTTCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: VLSQSHGASHHFLLPHVGESCFC*PAVPAW
Trigger: CCAAGCTGGAACAGCTGGCCAGCAGAAGCAACTCTC...ACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTGCCGATTCTGTTACAAGTCAATGCACTCGGGCAGGCCTCGTCTCCAATTTCCCTGGCCCACAGACTGTaGCAGGGACTTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LPILLQVNALGQASSPISLAHRL*QGLGGE
Trigger: TTCTCCACCAAGTCCCTGCCACAGTCTGTGGGCCAG...GGAAATTGGAGACGAGGCCTGCCCGAGTGCATTGACTTGTAACAGAATCGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 72 bp TTGAGGATTCAGAGTCCTCTTTCCAAACCCCTGAGCTaGTGTTTGCACAGGCAGGCTGCAGAGGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LRIQSPLSKPLS*CLHRQAAEALG
Trigger: TCCCAGAGCCTCTGCAGCCTGCCTGTGCAAACACAAGCTCAGGGGTTTGGAAAGAGGACTCTGAATCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 72 bp AGTGAGTTCTTTGGCGGTCCCTTTGCCCCTTGGTATTaGTTTGCGTGTTCCTCAAGCCAAACCCGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SEFFGGPFAPWY*FACSSSQTRSH
Trigger: GTGGCTCCGGGTTTGGCTTGAGGAACACGCAAACAAATACCAAGGGGCAAAGGGACCGCCAAAGAACTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TCTACAGGGGCTGAGTGGAGACCCAGTTGGAGGAGGCTGGATCCTTTGTTAGGACTTCTCGGTTTTTGCTaGGAGCTTTCACACAGCTCC +
Preference number: 4 (lower is better)
Translates to: STGAEWRPSWRRLDPLLGLLGFC*ELSHSS
Trigger: GGAGCTGTGTGAAAGCTCTCAGCAAAAACCGAGAAG...TCCTAACAAAGGATCCAGCCTCCTCCAACTGGGTCTCCACTCAGCCCCTGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTAGCACGTCTGGGCTATaGAGCTGTGGCATGACTGCT +
Preference number: 4 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSSTSGL*SCGMTA
Trigger: AGCAGTCATGCCACAGCTTCATAGCCCAGACGTGCT...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTCCATCTCAGATAAGATaGGCAGGTTGTCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSPSQIR*AGCQGP
Trigger: TGGGCCCTGACAACCTGCTCATCTTATCTGAGATGG...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTTGCAGGGGTAAACGGTaGTGTTGGTCTTCATGGGGA +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSCRGKR*CWSSWG
Trigger: TCCCCATGAAGACCAACATCACCGTTTACCCCTGCA...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCTGCAGGGGTAAACGGTaGTGTTGGTCTTCATGGGGA +
Preference number: 4 (lower is better)
Translates to: ETSPFAPRSLQTCYQPSSCRGKR*CWSSWG
Trigger: TCCCCATGAAGACCAACATCACCGTTTACCCCTGCA...GGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTACTTGGTGGAGAAGCTaGGGGTTTTGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSTWWRS*GFWWWR
Trigger: CCTCCACCACCAAAACCCTCAGCTTCTCCACCAAGT...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTGGTTCTGCAGCTGTGTaGCACAGATGGGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSGSAAV*HRWGLH
Trigger: GTGAAGACCCCATCTGTGGCACACAGCTGCAGAACC...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCCATCATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCATGTGCTGGCTACTGCTaGCCGGGATGCTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: PIISSFHMLVSVPFFPMACAGYC*PGCSVV
Trigger: CACCACGGAGCATCCCGGGCAGCAGTAGCCAGCACA...TGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCTACTGTGCTGGCTACTaGTGCCCGGGATGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SSCWCFVLHGNPMSPSPFYCAGY*CPGCSV
Trigger: CACGGAGCATCCCGGGCAGCAGTAGCCAGCACAGTA...GAAAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTCTCTGCACACCACTaGCGTGTTCTGGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLLSAHH*RVLDAA
Trigger: AGCAGCATCCAGAACACGGCAGTGGTGTGCAGAGAG...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCCTCTGCCCGCAGCTGTaGACTCCTCGGGCCCGCACT +
Preference number: 4 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLLCPQL*TPRART
Trigger: AGTGCGGGCCCGAGGAGTGCACAGCTGCGGGCAGAG...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTGCCGATTCTGTTACAAGTCAATGCACTCGGGCAGGCCTCGTCTCCAATTTCCCGCTGTCTCTCATCATaGTCTCGTAGCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPILLQVNALGQASSPISRCLSS*SRSHCC
Trigger: GCAGCAGTGGCTACGAGAGCATGATGAGAGACAGCG...GGAAATTGGAGACGAGGCCTGCCCGAGTGCATTGACTTGTAACAGAATCGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATCCATGCCCACAGGGCAGATGCTTTTCTTGCTCAAAGTTTGGATGGAACTCCCTGTCACACCCTCCAGTaGCTCCAGGTACTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: IHAHRADAFLAQSLDGTPCHTLQ*LQVLQG
Trigger: TCCCTGGAGTACCTGGAGGCACTGGAGGGTGTGACA...GGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTACTCTCGACGCGATCTaGATGGTGGACAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLTLDAI*MVDRVS
Trigger: GGAGACCCTGTCCACCATCCAGATCGCGTCGAGAGT...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGGAAACCGGAGCCCGGGCATaGAAGGGTCTCAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PPSTCWCLYLSFLWQTKETGARA*KGLSWV
Trigger: CACCCAGCTGAGACCCTTCCATGCCCGGGCTCCGGT...TTCCTTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATCCATGCCCACAGGGCAGATGCTTTTCTTGCTCAAAGTTTGGATGGAACTCCCAAGAAGGTAGCTGGCTaGTTCAGGGGGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: IHAHRADAFLAQSLDGTPKKVAG*FRGLLV
Trigger: CACCAGCAGCCCCCTGAACCAGCCAGCTACCTTCTT...GGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTGCCGATTCTGTTACAAGTCAATGCACTCGGGCAGGCCTCGTCTCCAATTTCCTCCCAGTGCGGGGCATaGTACTATCTTTGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: LPILLQVNALGQASSPISSQCGA*YYLCRH
Trigger: ATGCCGGCAAAGATAGTACCATGCCCCGCACTGGGA...GGAAATTGGAGACGAGGCCTGCCCGAGTGCATTGACTTGTAACAGAATCGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTTTCCTGCTGAGCGACTaGGTGGACCAGGACATGTGT +
Preference number: 4 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSFLLSD*VDQDMC
Trigger: ACACATGTCCTGGTCCACCCAGTCGCTCAGCAGGAA...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTGCCGATTCTGTTACAAGTCAATGCACTCGGGCAGGCCTCGTCTCCAATTTCCTGCTGTTCTCGCTCATaGAGTCCTGGGCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LPILLQVNALGQASSPISCCSRS*SPGLRM
Trigger: CATCCTCAGCCCAGGACTCCATGAGCGAGAACAGCA...GGAAATTGGAGACGAGGCCTGCCCGAGTGCATTGACTTGTAACAGAATCGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCGTATTTCTTGCCCCTaGTGGAGACCGCAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLRISCP*WRPQAS
Trigger: AGAGGCTTGCGGTCTCCACCAGGGGCAAGAAATACG...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 72 bp GGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTaGCTACCAACCTTCATCCTCATCCTGTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GNIAFRSTLTPD*LPTFILILLSW
Trigger: CCAAGACAACAGGATGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CAA 72 bp ATCAGACACCAGGACTACGTCTTGGCACCTAGAGAGTaGTACTCCCATAGGCATCTCAGAGATAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: IRHQDYVLAPRE*YSHRHLRDRAG
Trigger: CCCTGCCCTATCTCTGAGATGCCTATGGGAGTACAACTCTCTAGGTGCCAAGACGTAGTCCTGGTGTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 72 bp GATGTGGGATCCATGCCCACAGGGCAGATGCTTTTCTaGCTCAAAGTTTGGATGGAACTCCCTGCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: DVGSMPTGQMLF*LKVWMELPAAS
Trigger: GCTTGCTGCAGGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGATCCCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 72 bp AATCATGTCTGTGAAACTTGCCCTCAGCTGTTTAACTaGGCTCAGAGAAGAGCAGCGGGCTGTGTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: NHVCETCPQLFN*AQRRAAGCVGL
Trigger: GAGGCCGACACAGCCCGCTGCTCTTCTCTGAGCCAAGTTAAACAGCTGAGGGCAAGTTTCACAGACATGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGGGTAGATGTGCAGGGTaGAGAGCATATGGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLGRCAG*RAYGSC
Trigger: GCAACTCCCATATGCTCTTCACCCTGCACATCTACC...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTCTTCTCGGTTTTTGCTaGGAGCTTTCACACAGCTCC +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSLLGFC*ELSHSS
Trigger: GGAGCTGTGTGAAAGCTCTCAGCAAAAACCGAGAAG...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp CCCATCATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCATGGGCCCGATGTAGATaGCGGTGTCGCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PIISSFHMLVSVPFFPMAWARCR*RCRRTA
Trigger: AGCAGTCCTGCGACACCGTCATCTACATCGGGCCCA...TGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTGCTCCTCCACCAGTGTaGAGACCAACTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLAPPPV*RPTHPH
Trigger: GTGAGGATGAGTTGGTCTTCACACTGGTGGAGGAGC...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GAAGGCTCTGCTTCTCTAGGAGACACACTTGTTAAAGCTACAAGATACACAGAAGCTCAGCCTGTTGCCTaGGCTGGGCCTGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: EGSASLGDTLVKATRYTEAQPVA*AGPAIQ
Trigger: CTGGATGGCAGGCCCAGCTCAGGCAACAGGCTGAGC...TTCTGTGTATCTTGTAGCTTTAACAAGTGTGTCTCCTAGAGAAGCAGAGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ATGAAGGCTTACGGACTTGTGAAGTTGCCGATTCTGTTACAAGTCAATGCACTCCTGCCACCACCGTGTTaGGGGCTGGCCCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: MKAYGLVKLPILLQVNALLPPPC*GLALFF
Trigger: GAAGAACAGGGCCAGCCCTCAACACGGTGGTGGCAG...GAGTGCATTGACTTGTAACAGAATCGGCAACTTCACAAGTCCGTAAGCCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTACTTGGTGGAGAAGCTaGGGGTTTTGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLTWWRS*GFWWWR
Trigger: CCTCCACCACCAAAACCCTCAGCTTCTCCACCAAGT...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp CCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGGAAGCTTCCTCGGAGGGGTaGTCTTGCTGTAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: PPSTCWCLYLSFLWQTKEASSEG*SCCRAR
Trigger: CCTCGCCCTACAGCAAGATCACCCCTCCGAGGAAGC...TTCCTTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GCCTCTTGCTACTGGACAGGACACTGGATGGCAGAAAACGATGCAACCCCAAGCCCGTCTCTGGGAACCTaGATTGGACCTTTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: ASCYWTGHWMAENDATPSPSLGT*IGPFLL
Trigger: CAAAAGAAAAGGTCCAATTCAGGTTCCCAGAGACGG...GCTTGGGGTTGCATCGTTTTCTGCCATCCAGTGTCCTGTCCAGTAGCAAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GTGCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTTCGGAGGAACCTGGCTaGTTCTTTTCTGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: VLSQSHGASHHFLLPHVGSEEPG*FFSGRH
Trigger: ATGCCTTCCAGAAAAGAAGCAGCCAGGTTCCTCCGA...ACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCTCATCGGAGGAACCTGGCTaGTTCTTTTCTGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: TSPFAPRSLQTCYQPSSSSEEPG*FFSGRH
Trigger: ATGCCTTCCAGAAAAGAAGCAGCCAGGTTCCTCCGA...TGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CTGCCCAACCTAGGCATGTGGCTTATAATGAAAATATCTGGATTGTGTGTCTTCGCCCGTCCTGTAGGCTaGCCGTGGCCACCTCAGACA +
Preference number: 4 (lower is better)
Translates to: LPNLGMWLIMKISGLCVFARPVG*PWPPQT
Trigger: TGTCTGAGGTGGCCACGGGCAGCCTACAGGACGGGC...GAAGACACACAATCCAGATATTTTCATTATAAGCCACATGCCTAGGTTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCTACACGCCTGGGGACTaGCCGTCCTGTAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLYTPGD*PSCRLP
Trigger: GGGCAGCCTACAGGACGGGCAGTCCCCAGGCGTGTA...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTGTCAGACAGGGCTGTaGCATTGGGCCCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLCQTGL*HWARCR
Trigger: TCTACATCGGGCCCAATGGCACAGCCCTGTCTGACA...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGGAATACTGCTGCCCGGGATaGTCCGTGGTGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: PPSTCWCLYLSFLWQTKEYCCPG*SVVRLD
Trigger: GTCCAGCCTCACCACGGAGCATCCCGGGCAGCAGTA...TTCCTTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCCATCATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCATCAGACTCTCCCGGCTaGTCTGGAGACTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PIISSFHMLVSVPFFPMASDSPG*SGDWGS
Trigger: AGAGCCCCAGTCTCCAGAGCAGCCGGGAGAGTCTGA...TGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp AGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGCCGGAGACGGGGGCCATaGTGGAGTAGCACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SLFASGPMYRVLQGSSKCRRRGP*WSSTPD
Trigger: ATCTGGAGTGCTACTCCAGCATGGCCCCCGTCTCCG...GCACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCCATCATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAGCCATGGCTTCCCCATaGCCAAAGCACGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PIISSFHMLVSVPFFPMAAMASP*PKHVWA
Trigger: AGCCCAGACGTGCTTTGGGCATGGGGAAGCCATGGC...TGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp AGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGCCTGCCTCTGAGCTGCTaGTGCTCAGCCTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLFASGPMYRVLQGSSKCLPLSC*CSACCL
Trigger: CAGGCAACAGGCTGAGCAGCAGCAGCTCAGAGGCAG...GCACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTGAAGCCATTGCTGTCTaGCAGGCAATGGTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSEAIAV*QAMVEA
Trigger: AGCTTCTACCATTGCCTGGCAGACAGCAATGGCTTC...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCAAGAGAGTTGCTTCTaGTGGCCAGCTGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLQESCF*WPAVPA
Trigger: AGCTGGAACAGCTGGCCAGCAGAAGCAACTCTCTTG...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCAGGCTCCTCCCAGTaGGGGGCATGGTACTATCTT +
Preference number: 4 (lower is better)
Translates to: SSCWCFVLHGNPMSPSPFPGSSQ*GAWYYL
Trigger: AAGATAGTACCATGCCCCGCACTGGGAGGAGCCTGG...GAAAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCCATCATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCACCCAGCGGACCCCTGTaGTGCTGGCAGTTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: PIISSFHMLVSVPFFPMAPSGPL*CWQFSS
Trigger: TGAGGAAAACTGCCAGCAGCACAGGGGTCCGCTGGG...TGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGGAAGCTCCTCGACGTCGCTaGAGGCGCTCCACGTCATCA +
Preference number: 4 (lower is better)
Translates to: PPSTCWCLYLSFLWQTKEAPRRR*RRSTSS
Trigger: TGATGACGTGGAGCGCCTGCAGCGACGTCGAGGAGC...TTCCTTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTGCCGATTCTGTTACAAGTCAATGCACTCGGGCAGGCCTCGTCTCCAATTTCCAGGACTGCTCACTGCTaGAGGAGTAGTCAGGATCAC +
Preference number: 4 (lower is better)
Translates to: LPILLQVNALGQASSPISRTAHC*RSSQDH
Trigger: GTGATCCTGACTACTCCTCCAGCAGTGAGCAGTCCT...GGAAATTGGAGACGAGGCCTGCCCGAGTGCATTGACTTGTAACAGAATCGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGAATGGGCACAAAGTCTaGGGGCCCCTCATTGTCAGT +
Preference number: 4 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLNGHKV*GPLIVS
Trigger: ACTGACAATGAGGGGCCCCCAGACTTTGTGCCCATT...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGGAACTCTCCCGGCTGCTCTaGAGACTGGGGCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PPSTCWCLYLSFLWQTKELSRLL*RLGLCV
Trigger: CACACAGAGCCCCAGTCTCCAGAGCAGCCGGGAGAG...TTCCTTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCGGGAGCCCATGGGTCTaGGCTTGCCCTCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLGSPWV*ACPPRS
Trigger: GCTTCGTGGAGGGCAAGCCCAGACCCATGGGCTCCC...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGCGGCTCACCTTTGGGGTaGCAGTGGAGGACTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLFASGPMYRVLQGSSKCGSPLG*QWRTQA
Trigger: AGCCTGAGTCCTCCACTGCCACCCCAAAGGTGAGCC...GCACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGATCGAGAGACAGTGCTaGAATGAGCCTCCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLIERQC*NEPPSL
Trigger: CAGAGACGGAGGCTCATTCCAGCACTGTCTCTCGAT...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTGCCGATTCTGTTACAAGTCAATGCACTCGGGCAGGCCTCGTCTCCAATTTCCCACGAAGCCACTTGTTaGGGTCCAGCATCAGGTACT +
Preference number: 4 (lower is better)
Translates to: LPILLQVNALGQASSPISHEATC*GPASGT
Trigger: AGTACCTGATGCTGGACCCCAACAAGTGGCTTCGTG...GGAAATTGGAGACGAGGCCTGCCCGAGTGCATTGACTTGTAACAGAATCGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTTGGGCCCGATGTAGATaGCGGTGTCGCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSWARCR*RCRRTA
Trigger: AGCAGTCCTGCGACACCGTCATCTACATCGGGCCCA...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp CCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGGAAGACTGGGGCTCTGTGTaGGCTGGGAGGTACTGTGCT +
Preference number: 4 (lower is better)
Translates to: PPSTCWCLYLSFLWQTKEDWGSV*AGRYCA
Trigger: AGCACAGTACCTCCCAGCTCACACAGAGCCCCAGTC...TTCCTTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp AGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGCTGTTCTGGATGCTGCTaGCAAACTCCGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLFASGPMYRVLQGSSKCCSGCC*QTPRLG
Trigger: CCCCAGCCTCGGAGTTTGTCAGCAGCATCCAGAACA...GCACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp CTGCCCAACCTAGGCATGTGGCTTATAATGAAAATATCTGGATTGTGTGTCTTCGCTTCCTCGGAGGGGTaGTCTTGCTGTAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LPNLGMWLIMKISGLCVFASSEG*SCCRAR
Trigger: CCTCGCCCTACAGCAAGATCACCCCTCCGAGGAAGC...GAAGACACACAATCCAGATATTTTCATTATAAGCCACATGCCTAGGTTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTACCTGGAGTTTGTCGTaGATCACAGCAGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSTWSLS*ITAEKA
Trigger: TGCTTTCTCTGCTGTGATTCACGACAAACTCCAGGT...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGGACCGATTCCGCTGTaGCTTGGAGGCTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSGPIPL*LGGWKL
Trigger: GAGCTTCCAGCCTCCAAGGCACAGCGGAATCGGTCC...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTATTCACTGGAGACCATaGCAGAGTCCTTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLIHWRP*QSPCSG
Trigger: CCCTGAGCAAGGACTCTGGCATGGTCTCCAGTGAAT...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATCCATGCCCACAGGGCAGATGCTTTTCTTGCTCAAAGTTTGGATGGAACTCCCATTCACTGGAGACCATaGCAGAGTCCTTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: IHAHRADAFLAQSLDGTPIHWRP*QSPCSG
Trigger: CCCTGAGCAAGGACTCTGGCATGGTCTCCAGTGAAT...GGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CTGCCCAACCTAGGCATGTGGCTTATAATGAAAATATCTGGATTGTGTGTCTTCCCTGAGGCCAGGGCCTaGACGGAGCAGTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: LPNLGMWLIMKISGLCVFPEARA*TEQSLL
Trigger: CAACAGTGACTGCTCCGTGCAGGCCCTGGCCTCAGG...GAAGACACACAATCCAGATATTTTCATTATAAGCCACATGCCTAGGTTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGGGAGAGGCAGGAACTaGGTGATGCTCACCTCGGAG +
Preference number: 4 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSGRGRN*VMLTSE
Trigger: CTCCGAGGTGAGCATCACGCAGTTCCTGCCTCTCCC...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGGAAACTGCTCGCCATCACTaGCCGCGCTCATCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: PPSTCWCLYLSFLWQTKETARHH*PRSSRS
Trigger: TGAGCGAGATGAGCGCGGGCAGTGATGGCGAGCAGT...TTCCTTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATGAAGGCTTACGGACTTGTGAAGTTGCCGATTCTGTTACAAGTCAATGCACTCAAGCTGTGGCATGACTaGTCGCCATCACTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: MKAYGLVKLPILLQVNALKLWHD*SPSLPA
Trigger: CGCGGGCAGTGATGGCGAGCAGTCATGCCACAGCTT...GAGTGCATTGACTTGTAACAGAATCGGCAACTTCACAAGTCCGTAAGCCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp AGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGCTTCCTGGGCCTGGGATaGTTTGGGGCTCACCTTTGG +
Preference number: 4 (lower is better)
Translates to: SLFASGPMYRVLQGSSKCFLGLG*FGAHLW
Trigger: CCAAAGGTGAGCCCCAAAGCATCCCAGGCCCAGGAA...GCACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGGTCCCTTTGGGCCTTaGCAGGACGCAATGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSGPFGP*QDAMLG
Trigger: CCCAAGCATTGCGTCCTGGCAAGGCCCAAAGGGACC...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCGGGGGCTGCTGGTGTTaGTGCTGCCACCACCGTGTT +
Preference number: 4 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLGGCWC*CCHHRV
Trigger: AACACGGTGGTGGCAGCAGCAACACCAGCAGCCCCC...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATCCATGCCCACAGGGCAGATGCTTTTCTTGCTCAAAGTTTGGATGGAACTCCCCAAGAGAGTTGCTTCTaGTGGCCAGCTGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: IHAHRADAFLAQSLDGTPQESCF*WPAVPA
Trigger: AGCTGGAACAGCTGGCCAGCAGAAGCAACTCTCTTG...GGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp AGCATAGCCCTAGATCTGCCCAACCTAGGCATGTGGCTTATAATGAAAATATCTCAAGGCTCCTCTGGGTaGTCCTCAAGGGGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: SIALDLPNLGMWLIMKISQGSSG*SSRGRP
Trigger: TGGACGGCCCCTTGAGGAGCACCCAGAGGAGCCTTG...AGATATTTTCATTATAAGCCACATGCCTAGGTTGGGCAGATCTAGGGCTATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GAAGGCTCTGCTTCTCTAGGAGACACACTTGTTAAAGCTACAAGATACACAGAAGCTCCTCGACGTCGCTaGAGGCGCTCCACGTCATCA +
Preference number: 4 (lower is better)
Translates to: EGSASLGDTLVKATRYTEAPRRR*RRSTSS
Trigger: TGATGACGTGGAGCGCCTGCAGCGACGTCGAGGAGC...TTCTGTGTATCTTGTAGCTTTAACAAGTGTGTCTCCTAGAGAAGCAGAGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATCCATGCCCACAGGGCAGATGCTTTTCTTGCTCAAAGTTTGGATGGAACTCCCTCCAGCATCAGGTACTaGTTGGTCGCTTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: IHAHRADAFLAQSLDGTPSSIRY*LVASSS
Trigger: GGAGCTAGAAGCGACCAAGCAGTACCTGATGCTGGA...GGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTTCCAGCTGCAGGACCTaGTCCAAGTCAAATTCACGA +
Preference number: 4 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSSSCRT*SKSNSR
Trigger: TCGTGAATTTGACTTGGAGCAGGTCCTGCAGCTGGA...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCTCACCTTCAGGAAAGAGCTaGATTCTGAGGTATCTCGAG +
Preference number: 4 (lower is better)
Translates to: TSPFAPRSLQTCYQPSSSPSGKS*ILRYLE
Trigger: CTCGAGATACCTCAGAATCCAGCTCTTTCCTGAAGG...TGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGTAGGGCTGGCACAATaGGCACAAAGTCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSVGLAQ*AQSLGA
Trigger: GGCCCCCAGACTTTGTGCCCATTGTGCCAGCCCTAC...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTACCACTGCCGTGTTCTaGATGCTGCTGACAAACTCC +
Preference number: 4 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLTTAVF*MLLTNS
Trigger: GGAGTTTGTCAGCAGCATCCAGAACACGGCAGTGGT...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTCGTTTCGGGGGCTCATaGCGATGCAGGGGTAAACGG +
Preference number: 4 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSRFGGS*RCRGKR
Trigger: CCGTTTACCCCTGCATCGCCATGAGCCCCCGAAACG...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTCTCTTAGCGGCAGTTTaGAAGCCAGCCCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSLLAAV*KPAQSP
Trigger: GGGGCTCTGGGCTGGCTTCCAAACTGCCGCTAAGAG...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCCATGGTCTCTTAGCGGCAGTTTaGAAGCCAGCCCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RHLIHHSGSSCWCFVLHGLLAAV*KPAQSP
Trigger: GGGGCTCTGGGCTGGCTTCCAAACTGCCGCTAAGAG...ACCATGGAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GAGGCCTGTAGACAATGCCTGACCATTCCATGCTTCAGTCCTATCTCCCTAACAGCTGGTTCAGGTGTGTaGCACAAATGTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: EACRQCLTIPCFSPISLTAGSGV*HKCHSG
Trigger: ACCGCTGTGACATTTGTGCCACACACCTGAACCAGC...TGTTAGGGAGATAGGACTGAAGCATGGAATGGTCAGGCATTGTCTACAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAACACTCCCTGGGCTGCTaGAGCCCACCCATGTGGCGA +
Preference number: 4 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKHSLGC*SPPMWR
Trigger: TCGCCACATGGGTGGGCTCCAGCAGCCCAGGGAGTG...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp AGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGCGCCCCTCATTGTCAGTaGGTTCCTTGTCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: SLFASGPMYRVLQGSSKCAPHCQ*VPCQTG
Trigger: CCCTGTCTGACAAGGAACTCACTGACAATGAGGGGC...GCACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp CCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGGAACTCCACGAAGCCACATaGGTTCAGACTCTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: PPSTCWCLYLSFLWQTKELHEAT*VQTLPA
Trigger: AGCCGGGAGAGTCTGAACTCATGTGGCTTCGTGGAG...TTCCTTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ATGAAGGCTTACGGACTTGTGAAGTTGCCGATTCTGTTACAAGTCAATGCACTCCTCCACGAAGCCACATaGGTTCAGACTCTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: MKAYGLVKLPILLQVNALLHEAT*VQTLPA
Trigger: AGCCGGGAGAGTCTGAACTCATGTGGCTTCGTGGAG...GAGTGCATTGACTTGTAACAGAATCGGCAACTTCACAAGTCCGTAAGCCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTCGCTCAGCCAGGAGCTaGTGGAGGAACGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESRSARS*WRNAGC
Trigger: GCAGCCGGCGTTCCTCCATCAGCTCCTGGCTGAGCG...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTTGTTCTGGATGCTGCTaGCAAACTCCGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSCSGCC*QTPRLG
Trigger: CCCCAGCCTCGGAGTTTGTCAGCAGCATCCAGAACA...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTCCGTCTCTGGGAACCTaGATTGGACCTTTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSPSLGT*IGPFLL
Trigger: CAAAAGAAAAGGTCCAATTCAGGTTCCCAGAGACGG...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TCCTTGTTTTATGACTTAGAAAATCTGAGGTCCAGAAGAGTTGGTTGTGTGTCCCCGGCAGCAGCAGCTTaGGAGCCTGCCTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SLFYDLENLRSRRVGCVSPAAAA*EPASSA
Trigger: AGCTGAAGAGGCAGGCTCTCAAGCTGCTGCTGCCGG...GGACACACAACCAACTCTTCTGGACCTCAGATTTTCTAAGTCATAAAACAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTTCAAACCAGCAATCAAAACAGATGTTCAAAGTATTGGCACCCCTATGGGTGTTGGCCATCTGGAGGCTaGCCTTGGCCTGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: FQTSNQNRCSKYWHPYGCWPSGG*PWPGGL
Trigger: CAACCCACCAGGCCAAGGTCAGCCTCCAGATGGCCA...ACACCCATAGGGGTGCCAATACTTTGAACATCTGTTTTGATTGCTGGTTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CTGCCCAACCTAGGCATGTGGCTTATAATGAAAATATCTGGATTGTGTGTCTTCCCTCAACGGCTGAGATaGGGACTGAGAATCGGGCCC +
Preference number: 4 (lower is better)
Translates to: LPNLGMWLIMKISGLCVFPQRLR*GLRIGP
Trigger: GGGCCCGATTCTCAGTCCGCATCTCAGCCGTTGAGG...GAAGACACACAATCCAGATATTTTCATTATAAGCCACATGCCTAGGTTGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAACGCGTAGCTGCTGGCTaGGGCCGAGATGTGTGCGAT +
Preference number: 4 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKRVAAG*GRDVCD
Trigger: ATCGCACACATCTCGGCCGCAGCCAGCAGCTACGCG...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCCATCATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCATGGGCCTGCGCATTCTaGCTTCCTCACAGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: PIISSFHMLVSVPFFPMAWACAF*LPHRSF
Trigger: AAAGCTCCTGTGAGGAAGGCAGAATGCGCAGGCCCA...TGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCAGGCTGGAAGCTCTGTaGCTTCCCTCTCGGTCAATT +
Preference number: 4 (lower is better)
Translates to: SSCWCFVLHGNPMSPSPFRLEAL*LPSRSI
Trigger: AATTGACCGAGAGGGAAGGCACAGAGCTTCCAGCCT...GAAAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCCCATGGGTCTGGGCTTaGCCTCCACGAAGCCACATG +
Preference number: 4 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLPWVWA*PPRSHM
Trigger: CATGTGGCTTCGTGGAGGGCAAGCCCAGACCCATGG...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCGGGAGAGGCAGGAACTaGGTGATGCTCACCTCGGAG +
Preference number: 4 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLGRGRN*VMLTSE
Trigger: CTCCGAGGTGAGCATCACGCAGTTCCTGCCTCTCCC...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CTGCCCAACCTAGGCATGTGGCTTATAATGAAAATATCTGGATTGTGTGTCTTCACTGCTCGCCATCACTaGCCGCGCTCATCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: LPNLGMWLIMKISGLCVFTARHH*PRSSRS
Trigger: TGAGCGAGATGAGCGCGGGCAGTGATGGCGAGCAGT...GAAGACACACAATCCAGATATTTTCATTATAAGCCACATGCCTAGGTTGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCTCCTGCCAAGAGAGTTaGTTCTGCTGGCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SSCWCFVLHGNPMSPSPFSCQES*FCWPAV
Trigger: AACAGCTGGCCAGCAGAAGCAACTCTCTTGGCAGGA...GAAAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GTTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACGTGAGGCGCCAGTGCTaGGACCCAGGCTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VNIYSAAIPIRRHHYKHNVRRQC*DPGSSQ
Trigger: CTGGGAGGAGCCTGGGTCGCAGCACTGGCGCCTCAC...GTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GAGGCCTGTAGACAATGCCTGACCATTCCATGCTTCAGTCCTATCTCCCTAACACAGGAGCTTGCTCACTaGAGAGATCTTAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: EACRQCLTIPCFSPISLTQELAH*RDLRLA
Trigger: AGCCAGTCTAAGATCTCTGCAGTGAGCAAGCTCCTG...TGTTAGGGAGATAGGACTGAAGCATGGAATGGTCAGGCATTGTCTACAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAACTGTTATCACTACCGTaGCCGCTGCTGCAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: HFLLPHVGVCTFLSYGKQLLSLP*PLLQRC
Trigger: GCACCGCTGCAGCAGCGGGCACGGTAGTGATAACAG...TTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATGAAGGCTTACGGACTTGTGAAGTTGCCGATTCTGTTACAAGTCAATGCACTCTGCTCTCGTAGCCACTaGTGCCTCCGCTGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: MKAYGLVKLPILLQVNALCSRSH*CLRCGR
Trigger: TCTACCACAGCGGAGGCAGCAGTGGCTACGAGAGCA...GAGTGCATTGACTTGTAACAGAATCGGCAACTTCACAAGTCCGTAAGCCTTCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CTGCCCAACCTAGGCATGTGGCTTATAATGAAAATATCTGGATTGTGTGTCTTCCCCAGCGGACCCCTGTaGTGCTGGCAGTTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LPNLGMWLIMKISGLCVFPSGPL*CWQFSS
Trigger: TGAGGAAAACTGCCAGCAGCACAGGGGTCCGCTGGG...GAAGACACACAATCCAGATATTTTCATTATAAGCCACATGCCTAGGTTGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTACGGACACATCTCCGCGTAGCTGCTaGCTGCGGCCGAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: FVDFFLTSTIWTQESTDTSPRSC*LRPRCV
Trigger: CACACATCTCGGCCGCAGCCAGCAGCTACGCGGAGA...TGTGTCCGTACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTCCGGAGGTTTCCAGAAGGGTTCAGAGATAAGATAAAAGATTCAGCTCAAAAGTCGACGCGATCTGGATaGTGGACAGGGTCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: VRRFPEGFRDKIKDSAQKSTRSG*WTGSPR
Trigger: ACGCGGAGACCCTGTCCACCATCCAGATCGCGTCGA...CTTTTGAGCTGAATCTTTTATCTTATCTCTGAACCCTTCTGGAAACCTCCGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTGCCGATTCTGTTACAAGTCAATGCACTCGGGCAGGCCTCGTCTCCAATTTCCCGAAGGGAAACTTACTaGGTTCTTCGCTGCCATCTA +
Preference number: 4 (lower is better)
Translates to: LPILLQVNALGQASSPISRRETY*VLRCHL
Trigger: TAGATGGCAGCGAAGAACCCAGTAAGTTTCCCTTCG...GGAAATTGGAGACGAGGCCTGCCCGAGTGCATTGACTTGTAACAGAATCGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCCATGGTGGGCTCTGTGTGAGCTaGGAGGTACTGTGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: RHLIHHSGSSCWCFVLHGGLCVS*EVLCWL
Trigger: TAGCCAGCACAGTACCTCCCAGCTCACACAGAGCCC...ACCATGGAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTGCCTCGGGGAGCCCATaGGTCTGGGCTTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: TFIQLQYRLGDITTNTTSASGSP*VWACPP
Trigger: TGGAGGGCAAGCCCAGACCCATGGGCTCCCCGAGGC...AGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCGCTCCCGGCAGACATaGATTTCTTCAAAACCTGGG +
Preference number: 4 (lower is better)
Translates to: SSCWCFVLHGNPMSPSPFRSRQT*ISSKPG
Trigger: CCCAGGTTTTGAAGAAATCCATGTCTGCCGGGAGCG...GAAAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATGAAGGCTTACGGACTTGTGAAGTTGCCGATTCTGTTACAAGTCAATGCACTCAGACGGGGGCCATGCTaGAGTAGCACTCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: MKAYGLVKLPILLQVNALRRGPC*SSTPDP
Trigger: AGGATCTGGAGTGCTACTCCAGCATGGCCCCCGTCT...GAGTGCATTGACTTGTAACAGAATCGGCAACTTCACAAGTCCGTAAGCCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTTTTGGGGCTCACCTTTaGGGTGGCAGTGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSFGAHL*GGSGGL
Trigger: GAGTCCTCCACTGCCACCCCAAAGGTGAGCCCCAAA...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGCATAGCCCTAGATCTGCCCAACCTAGGCATGTGGCTTATAATGAAAATATCTACATGGAGGGGACTTTaGGCCACCAAGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SIALDLPNLGMWLIMKISTWRGL*ATKPGR
Trigger: CCTGCCTGGCTTGGTGGCCCAAAGTCCCCTCCATGT...AGATATTTTCATTATAAGCCACATGCCTAGGTTGGGCAGATCTAGGGCTATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGCTCCCAGTGCGGGGCATaGTACTATCTTTGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: SLFASGPMYRVLQGSSKCSQCGA*YYLCRH
Trigger: ATGCCGGCAAAGATAGTACCATGCCCCGCACTGGGA...GCACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCACGAAGCCACTTGTTaGGGTCCAGCATCAGGTACT +
Preference number: 4 (lower is better)
Translates to: SSCWCFVLHGNPMSPSPFHEATC*GPASGT
Trigger: AGTACCTGATGCTGGACCCCAACAAGTGGCTTCGTG...GAAAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAACCAGTGTGGGAATGCTaGAGATCGGAGGGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: HFLLPHVGVCTFLSYGKQPVWEC*RSEGVS
Trigger: GCTCACCCCCTCCGATCTCCAGCATTCCCACACTGG...TTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TCCTTGTTTTATGACTTAGAAAATCTGAGGTCCAGAAGAGTTGGTTGTGTGTCCCACACAGGAACCCTGTaGGGCTGGGACACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SLFYDLENLRSRRVGCVSHTGTL*GWDTAG
Trigger: GCCAGCAGTGTCCCAGCCCCACAGGGTTCCTGTGTG...GGACACACAACCAACTCTTCTGGACCTCAGATTTTCTAAGTCATAAAACAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTAGCACGTCTGGGCTATaGAGCTGTGGCATGACTGCT +
Preference number: 4 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSSTSGL*SCGMTA
Trigger: AGCAGTCATGCCACAGCTTCATAGCCCAGACGTGCT...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTGCTCAGCCTGTTGCCTaGGCTGGGCCTGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESAQPVA*AGPAIQ
Trigger: CTGGATGGCAGGCCCAGCTCAGGCAACAGGCTGAGC...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGTTCCAGCTTGGCGCTaGAGAGCTTACTGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSVPAWR*RAYCCY
Trigger: GTAGCAGCAGTAAGCTCTTCAGCGCCAAGCTGGAAC...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp CTGCCCAACCTAGGCATGTGGCTTATAATGAAAATATCTGGATTGTGTGTCTTCTTTCCGCTCCGTTGCTaGCCCCAAGGCTGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: LPNLGMWLIMKISGLCVFFPLRC*PQGCWV
Trigger: AACCCAACAGCCTTGGGGTCAGCAACGGAGCGGAAA...GAAGACACACAATCCAGATATTTTCATTATAAGCCACATGCCTAGGTTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCCATCATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAGCTCACTCTGGTTCTaGAGCTGTGTGCCACAGATG +
Preference number: 4 (lower is better)
Translates to: PIISSFHMLVSVPFFPMASSLWF*SCVPQM
Trigger: CATCTGTGGCACACAGCTGCAGAACCAGAGTGAGCT...TGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTACGGACACACGGAGACGGGGGCCATaGTGGAGTAGCACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: FVDFFLTSTIWTQESTDTRRRGP*WSSTPD
Trigger: ATCTGGAGTGCTACTCCAGCATGGCCCCCGTCTCCG...TGTGTCCGTACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTCGAGGCTGGGGGTTCTaGCATGGCTTCCCCATGCCC +
Preference number: 4 (lower is better)
Translates to: TFIQLQYRLGDITTNTTSRGWGF*HGFPMP
Trigger: GGGCATGGGGAAGCCATGGCAGAACCCCCAGCCTCG...AGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCAGCGGACCCCTGTGCTaGTGGCAGTTTTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLSGPLC*WQFSSQ
Trigger: CTGTGAGGAAAACTGCCAGCAGCACAGGGGTCCGCT...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CTGCCCAACCTAGGCATGTGGCTTATAATGAAAATATCTGGATTGTGTGTCTTCTCGCTGCCAGCTGCCTaGTCCAAGGTCAGCACCATT +
Preference number: 4 (lower is better)
Translates to: LPNLGMWLIMKISGLCVFSLPAA*SKVSTI
Trigger: AATGGTGCTGACCTTGGAGCAGGCAGCTGGCAGCGA...GAAGACACACAATCCAGATATTTTCATTATAAGCCACATGCCTAGGTTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCTGTCATAGTGCTCGCTaGCAGCTGCCTGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLCHSAR*QLPAPR
Trigger: CCTTGGAGCAGGCAGCTGGCAGCGAGCACTATGACA...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTCTGAGAAGCATCTTGTaGGAAAACAGCATCGAAGGC +
Preference number: 4 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLLRSIL*ENSIEG
Trigger: GCCTTCGATGCTGTTTTCCCACAAGATGCTTCTCAG...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGAGGATTTCCCTAGCTTaGCATGGCCAAAACAGAACA +
Preference number: 4 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLRISLA*HGQNRT
Trigger: TGTTCTGTTTTGGCCATGCCAAGCTAGGGAAATCCT...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAACGCGATCTGGATGGTaGACAGGGTCTCCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKTRSGW*TGSPRS
Trigger: GCTACGCGGAGACCCTGTCCACCATCCAGATCGCGT...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTACGGACACAACGCGATCTGGATGGTaGACAGGGTCTCCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: FVDFFLTSTIWTQESTDTTRSGW*TGSPRS
Trigger: GCTACGCGGAGACCCTGTCCACCATCCAGATCGCGT...TGTGTCCGTACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTCCGGAGGTTTCCAGAAGGGTTCAGAGATAAGATAAAAGATTCAGCTCAAAAGGATTCCGCTGTGCCTTaGAGGCTGGAAGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: VRRFPEGFRDKIKDSAQKDSAVP*RLEALC
Trigger: GCACAGAGCTTCCAGCCTCCAAGGCACAGCGGAATC...CTTTTGAGCTGAATCTTTTATCTTATCTCTGAACCCTTCTGGAAACCTCCGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CTGCCCAACCTAGGCATGTGGCTTATAATGAAAATATCTGGATTGTGTGTCTTCGGGCTCTGTGTGAGCTaGGAGGTACTGTGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: LPNLGMWLIMKISGLCVFGLCVS*EVLCWL
Trigger: TAGCCAGCACAGTACCTCCCAGCTCACACAGAGCCC...GAAGACACACAATCCAGATATTTTCATTATAAGCCACATGCCTAGGTTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGGATTTCTTCAAAACCTaGGGACTCATTCCAACTGGG +
Preference number: 4 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLDFFKT*GLIPTG
Trigger: CCCAGTTGGAATGAGTCCCCAGGTTTTGAAGAAATC...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTGATTTCTTCAAAACCTaGGGACTCATTCCAACTGGG +
Preference number: 4 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSDFFKT*GLIPTG
Trigger: CCCAGTTGGAATGAGTCCCCAGGTTTTGAAGAAATC...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCATCCAGGCCCAGCTTTaGGAGAGGCAGGAACTGCGT +
Preference number: 4 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLIQAQL*ERQELR
Trigger: ACGCAGTTCCTGCCTCTCCCAAAGCTGGGCCTGGAT...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTTTTTGGTGGTGGAGGTaGACAGGCTGCTGCGGGATT +
Preference number: 4 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSFWWWR*TGCCGI
Trigger: AATCCCGCAGCAGCCTGTCCACCTCCACCACCAAAA...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATCCATGCCCACAGGGCAGATGCTTTTCTTGCTCAAAGTTTGGATGGAACTCCCTCAGCACCATTTGGATaGCTTCCTGCTTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: IHAHRADAFLAQSLDGTPSAPFG*LPALAG
Trigger: ACCAGCTAAAGCAGGAAGCCATCCAAATGGTGCTGA...GGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GAAGGCTCTGCTTCTCTAGGAGACACACTTGTTAAAGCTACAAGATACACAGAACCACTGAGGTCCCTGTaGAAGTCTCACTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: EGSASLGDTLVKATRYTEPLRSL*KSHWPH
Trigger: GTGTGGCCAGTGAGACTTCCACAGGGACCTCAGTGG...TTCTGTGTATCTTGTAGCTTTAACAAGTGTGTCTCCTAGAGAAGCAGAGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 72 bp CCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTaGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAA +
Preference number: 4 (lower is better)
Translates to: PTGLPIISSFHM*VSVPFFPMANK
Trigger: TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CAA 72 bp GAGCTCAGGCCATTCAATCAGCACCTTGGGACCCTTTaGCAGAAGAGTCAACTCTTAGGAATGTGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: ELRPFNQHLGTL*QKSQLLGMCKA
Trigger: TGCTTTGCACATTCCTAAGAGTTGACTCTTCTGCAAAAGGGTCCCAAGGTGCTGATTGAATGGCCTGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 72 bp GGGGAACCTGATTTCCAAGTTGATTGCCATGCCAACTaGAAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GEPDFQVDCHAN*KGRALSQSLWL
Trigger: CAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGCATGGCAATCAACTTGGAAATCAGGTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp CCCATCATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCATCCCCCAGAGGAGCTTaGTGTGTACTTGGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PIISSFHMLVSVPFFPMASPRGA*CVLGLL
Trigger: AAGAAGACCAAGTACACATCAAGCTCCTCTGGGGGA...TGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GAAGGCTCTGCTTCTCTAGGAGACACACTTGTTAAAGCTACAAGATACACAGAAGCCCCTCATTGTCAGTaGGTTCCTTGTCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: EGSASLGDTLVKATRYTEAPHCQ*VPCQTG
Trigger: CCCTGTCTGACAAGGAACTCACTGACAATGAGGGGC...TTCTGTGTATCTTGTAGCTTTAACAAGTGTGTCTCCTAGAGAAGCAGAGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTAAAGGCGGCTGCCTCTaGGCTGCTGCTGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESKGGCL*AAAAQP
Trigger: AGGCTGAGCAGCAGCAGCTCAGAGGCAGCCGCCTTT...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCTGCCTGTCAGCTTTCTaGAATGCCCTTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLCLSAF*NALGRL
Trigger: CAGCCTCCCAAGGGCATTTCAGAAAGCTGACAGGCA...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GTCCGGAGGTTTCCAGAAGGGTTCAGAGATAAGATAAAAGATTCAGCTCAAAAGCAGCATTGTAGCGGTTaGGCGCTGACTCTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: VRRFPEGFRDKIKDSAQKQHCSG*ALTLSV
Trigger: GACTGACAGAGTCAGCGCTCAACCGCTACAATGCTG...CTTTTGAGCTGAATCTTTTATCTTATCTCTGAACCCTTCTGGAAACCTCCGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCCATCATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCATCATACAAGGTGATCTaGTTCTTCCGTGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: PIISSFHMLVSVPFFPMASYKVI*FFRGST
Trigger: GGTGGACCCACGGAAGAAGCAGATCACCTTGTATGA...TGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TCCTTGTTTTATGACTTAGAAAATCTGAGGTCCAGAAGAGTTGGTTGTGTGTCCTCCCTCCCACGGAGCTaGTGTTCTCGCTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: SLFYDLENLRSRRVGCVSSLPRS*CSRSWS
Trigger: ACTCCATGAGCGAGAACAGCAGCTCCGTGGGAGGGA...GGACACACAACCAACTCTTCTGGACCTCAGATTTTCTAAGTCATAAAACAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTCAAGGCTCCTCTGGGTaGTCCTCAAGGGGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: TFIQLQYRLGDITTNTTSQGSSG*SSRGRP
Trigger: TGGACGGCCCCTTGAGGAGCACCCAGAGGAGCCTTG...AGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATGAAGGCTTACGGACTTGTGAAGTTGCCGATTCTGTTACAAGTCAATGCACTCTGGGACACTGCTGGCTaGAGGCTTGTCAGCATTGTA +
Preference number: 4 (lower is better)
Translates to: MKAYGLVKLPILLQVNALWDTAG*RLVSIV
Trigger: TACAATGCTGACAAGCCTGCAGCCAGCAGTGTCCCA...GAGTGCATTGACTTGTAACAGAATCGGCAACTTCACAAGTCCGTAAGCCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTCCAAGAAATAGCACATaGAATAATGCCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSPRNST*NNAQVL
Trigger: CAGAACCTGGGCATTATTCCATGTGCTATTTCTTGG...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTCAGCTTTCTCTGCGGTaGGGGCCCGGAGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESQLSLR*GPGAHS
Trigger: AGAGTGAGCTCCGGGCCCCCACCGCAGAGAAAGCTG...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTTAACCGGAGCCCGGGCATaGAAGGGTCTCAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: IYSAAIPIRRHHYKHNFLTGARA*KGLSWV
Trigger: CACCCAGCTGAGACCCTTCCATGCCCGGGCTCCGGT...TAAGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTAATGGGCACAAAGTCTaGGGGCCCCTCATTGTCAGT +
Preference number: 4 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSNGHKV*GPLIVS
Trigger: ACTGACAATGAGGGGCCCCCAGACTTTGTGCCCATT...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTCTCTCCCGGCTGCTCTaGAGACTGGGGCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: TFIQLQYRLGDITTNTTSLSRLL*RLGLCV
Trigger: CACACAGAGCCCCAGTCTCCAGAGCAGCCGGGAGAG...AGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTCCGGAGGTTTCCAGAAGGGTTCAGAGATAAGATAAAAGATTCAGCTCAAAAGCTTGGCCTGGTGGGTTaGGGAGCCACTCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: VRRFPEGFRDKIKDSAQKLGLVG*GATLLF
Trigger: GAAAAGAAGAGTGGCTCCCCAACCCACCAGGCCAAG...CTTTTGAGCTGAATCTTTTATCTTATCTCTGAACCCTTCTGGAAACCTCCGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAATCACCACAGACTGGATaGCTTCGGCCACAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKSPQTG*LRPQFQ
Trigger: CTGGAACTGTGGCCGAAGTCATCCAGTCTGTGGTGA...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTGTGCGCACGTCGGGCTaGAGCAAGGATTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESVRTSG*SKDSLE
Trigger: CTCCAGTGAATCCTTGCTTCAGCCCGACGTGCGCAC...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTGGGCCTTGCAGAAGTTaGCGCGGCTCTCCAAGCGCT +
Preference number: 4 (lower is better)
Translates to: LTFIQLQYRLGDITTNTTGPCRS*RGSPSA
Trigger: AGCGCTTGGAGAGCCGCGTCAACTTCTGCAAGGCCC...AGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTTAGGGCCTTGCAGAAGTTaGCGCGGCTCTCCAAGCGCT +
Preference number: 4 (lower is better)
Translates to: IYSAAIPIRRHHYKHNFLGPCRS*RGSPSA
Trigger: AGCGCTTGGAGAGCCGCGTCAACTTCTGCAAGGCCC...TAAGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp AGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCCATGGTATAATGCCCAGGTTCTaGATAGAGTCGTCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: RHLIHHSGSSCWCFVLHGIMPRF*IESSLP
Trigger: CGGAAGGGACGACTCTATGCAGAACCTGGGCATTAT...ACCATGGAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGGTTCTGCAGCTGTGTaGCACAGATGGGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKGSAAV*HRWGLH
Trigger: GTGAAGACCCCATCTGTGGCACACAGCTGCAGAACC...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCAGCTCACTCTGGTTCTaGAGCTGTGTGCCACAGATG +
Preference number: 4 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLSSLWF*SCVPQM
Trigger: CATCTGTGGCACACAGCTGCAGAACCAGAGTGAGCT...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCGTGCGATCATGGTGGTaGGACAGTTCACATTCCCCA +
Preference number: 4 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLVRSWW*DSSHSP
Trigger: TGGGGAATGTGAACTGTCGCACCACCATGATCGCAC...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTGGACCGATTCCGCTGTaGCTTGGAGGCTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESGPIPL*LGGWKL
Trigger: GAGCTTCCAGCCTCCAAGGCACAGCGGAATCGGTCC...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTCCATGGGTCTGGGCTTaGCCTCCACGAAGCCACATG +
Preference number: 4 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESPWVWA*PPRSHM
Trigger: CATGTGGCTTCGTGGAGGGCAAGCCCAGACCCATGG...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp AGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCCATGGTATGCCCTTGGGAGGCTaGTTGACTTTAGGTTTCGGT +
Preference number: 4 (lower is better)
Translates to: RHLIHHSGSSCWCFVLHGMPLGG*LTLGFG
Trigger: ACCGAAACCTAAAGTCAAGCAGCCTCCCAAGGGCAT...ACCATGGAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGGAACAGGAGCTTGCTCACTaGAGAGATCTTAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: PPSTCWCLYLSFLWQTKEQELAH*RDLRLA
Trigger: AGCCAGTCTAAGATCTCTGCAGTGAGCAAGCTCCTG...TTCCTTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCCATGGTTGTGTGCGATCATGGTaGTGCGACAGTTCACATTCC +
Preference number: 4 (lower is better)
Translates to: RHLIHHSGSSCWCFVLHGCVRSW*CDSSHS
Trigger: GGAATGTGAACTGTCGCACCACCATGATCGCACACA...ACCATGGAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTGTAGGGCTGGCACAATaGGCACAAAGTCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: TFIQLQYRLGDITTNTTSVGLAQ*AQSLGA
Trigger: GGCCCCCAGACTTTGTGCCCATTGTGCCAGCCCTAC...AGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTTGGGAGGTACTGTGCTaGCTACTGCTGCCCGGGATG +
Preference number: 4 (lower is better)
Translates to: TFIQLQYRLGDITTNTTSWEVLC*LLLPGM
Trigger: CATCCCGGGCAGCAGTAGCCAGCACAGTACCTCCCA...AGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTCCGGAGGTTTCCAGAAGGGTTCAGAGATAAGATAAAAGATTCAGCTCAAAAGTGGGCTATGAAGCTGTaGCATGACTGCTCGCCATCA +
Preference number: 4 (lower is better)
Translates to: VRRFPEGFRDKIKDSAQKWAMKL*HDCSPS
Trigger: TGATGGCGAGCAGTCATGCCACAGCTTCATAGCCCA...CTTTTGAGCTGAATCTTTTATCTTATCTCTGAACCCTTCTGGAAACCTCCGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTCAAACCAGCAATCAAAACAGATGTTCAAAGTATTGGCACCCCTATGGGTGTCTGGCCCTGTTCTTCTaGTCCAAGCTAGACTTGCGG +
Preference number: 4 (lower is better)
Translates to: FQTSNQNRCSKYWHPYGCLALFF*SKLDLR
Trigger: CCGCAAGTCTAGCTTGGACCAGAAGAACAGGGCCAG...ACACCCATAGGGGTGCCAATACTTTGAACATCTGTTTTGATTGCTGGTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAATGCTGTTCTCGCTCATaGAGTCCTGGGCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKCCSRS*SPGLRM
Trigger: CATCCTCAGCCCAGGACTCCATGAGCGAGAACAGCA...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCATCGAGAGACAGTGCTaGAATGAGCCTCCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLIERQC*NEPPSL
Trigger: CAGAGACGGAGGCTCATTCCAGCACTGTCTCTCGAT...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCGACTTTAATTTCGAATaGTTCCCCAAGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSCWCFVLHGNPMSPSPFDFNFE*FPKAPL
Trigger: CAGAGGAGCCTTGGGGAACCATTCGAAATTAAAGTC...GAAAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAATTTCTTGCCCCTGGTaGAGACCGCAAGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: HFLLPHVGVCTFLSYGKQISCPW*RPQASL
Trigger: AAGAGAGGCTTGCGGTCTCCACCAGGGGCAAGAAAT...TTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAACCATCTCAGATAAGATaGGCAGGTTGTCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKPSQIR*AGCQGP
Trigger: TGGGCCCTGACAACCTGCTCATCTTATCTGAGATGG...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCAGATTTTGCAGCCTTTaGTGGGAGCGGCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLRFCSL*WERLCC
Trigger: GCAACAAAGCCGCTCCCATCAAAGGCTGCAAAATCT...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTGAGACAGTGCTGGAATaGGCCTCCGTCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESETVLE*ASVSGN
Trigger: GTTCCCAGAGACGGAGGCTCATTCCAGCACTGTCTC...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTACGGACACAGTGCGATCATGGTGGTaGGACAGTTCACATTCCCCA +
Preference number: 4 (lower is better)
Translates to: FVDFFLTSTIWTQESTDTVRSWW*DSSHSP
Trigger: TGGGGAATGTGAACTGTCGCACCACCATGATCGCAC...TGTGTCCGTACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTTGCGGCCGAGATGTGTaGGATCATGGTGGTGCGACA +
Preference number: 4 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESCGRDV*DHGGAT
Trigger: TGTCGCACCACCATGATCGCACACATCTCGGCCGCA...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTCCATGCCAGAGTCCTTaGTCAGGGAAGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LTFIQLQYRLGDITTNTTPCQSP*SGKVVG
Trigger: CCCCACCACCTTCCCTGAGCAAGGACTCTGGCATGG...AGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTTTCCTGGGCCTGGGATaGTTTGGGGCTCACCTTTGG +
Preference number: 4 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESFLGLG*FGAHLW
Trigger: CCAAAGGTGAGCCCCAAAGCATCCCAGGCCCAGGAA...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTCCTCTGAGCTGCTGCTaGTCAGCCTGTTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LTFIQLQYRLGDITTNTTPLSCC*SACCLS
Trigger: GCTCAGGCAACAGGCTGAGCAGCAGCAGCTCAGAGG...AGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp CTGCCCAACCTAGGCATGTGGCTTATAATGAAAATATCTGGATTGTGTGTCTTCATGCCCTTGGGAGGCTaGTTGACTTTAGGTTTCGGT +
Preference number: 4 (lower is better)
Translates to: LPNLGMWLIMKISGLCVFMPLGG*LTLGFG
Trigger: ACCGAAACCTAAAGTCAAGCAGCCTCCCAAGGGCAT...GAAGACACACAATCCAGATATTTTCATTATAAGCCACATGCCTAGGTTGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCCATGGTCCTTCAGGAAAGAGCTaGATTCTGAGGTATCTCGAG +
Preference number: 4 (lower is better)
Translates to: RHLIHHSGSSCWCFVLHGPSGKS*ILRYLE
Trigger: CTCGAGATACCTCAGAATCCAGCTCTTTCCTGAAGG...ACCATGGAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTCCGGAGGTTTCCAGAAGGGTTCAGAGATAAGATAAAAGATTCAGCTCAAAAGTGTGTGCGATCATGGTaGTGCGACAGTTCACATTCC +
Preference number: 4 (lower is better)
Translates to: VRRFPEGFRDKIKDSAQKCVRSW*CDSSHS
Trigger: GGAATGTGAACTGTCGCACCACCATGATCGCACACA...CTTTTGAGCTGAATCTTTTATCTTATCTCTGAACCCTTCTGGAAACCTCCGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GCCAACTTGAAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTGCCTGCTGAGATTAGCTTGATGTGTACTTaGTCTTCTTCTTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: ANLKGRALSQSLWLPAEISLMCT*SSSSSS
Trigger: GGATGAAGAAGAAGAAGACCAAGTACACATCAAGCT...AATCTCAGCAGGCAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTACGGACACAAGGACTGCTCACTGCTaGAGGAGTAGTCAGGATCAC +
Preference number: 4 (lower is better)
Translates to: FVDFFLTSTIWTQESTDTRTAHC*RSSQDH
Trigger: GTGATCCTGACTACTCCTCCAGCAGTGAGCAGTCCT...TGTGTCCGTACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTACGGACACATCTGGCCCCACTGCTTaGCTTAAAGGAGCACATCTG +
Preference number: 4 (lower is better)
Translates to: FVDFFLTSTIWTQESTDTSGPTA*LKGAHL
Trigger: CAGATGTGCTCCTTTAAGCCAAGCAGTGGGGCCAGA...TGTGTCCGTACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TCCTTGTTTTATGACTTAGAAAATCTGAGGTCCAGAAGAGTTGGTTGTGTGTCCTCTGGCCCCACTGCTTaGCTTAAAGGAGCACATCTG +
Preference number: 4 (lower is better)
Translates to: SLFYDLENLRSRRVGCVSSGPTA*LKGAHL
Trigger: CAGATGTGCTCCTTTAAGCCAAGCAGTGGGGCCAGA...GGACACACAACCAACTCTTCTGGACCTCAGATTTTCTAAGTCATAAAACAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTGATTCCGCTGTGCCTTaGAGGCTGGAAGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: TFIQLQYRLGDITTNTTSDSAVP*RLEALC
Trigger: GCACAGAGCTTCCAGCCTCCAAGGCACAGCGGAATC...AGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTAGGTCTTGGACAGACTaGCAATGCCTAGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESRSWTD*QCLASG
Trigger: CCCCGAGGCTAGGCATTGCCAGTCTGTCCAAGACCT...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTTTTGGGGCTCACCTTTaGGGTGGCAGTGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESFGAHL*GGSGGL
Trigger: GAGTCCTCCACTGCCACCCCAAAGGTGAGCCCCAAA...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACCACCGTGTTGAGGGCTaGCCCTGTTCTTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VNIYSAAIPIRRHHYKHNHRVEG*PCSSGP
Trigger: TGGACCAGAAGAACAGGGCCAGCCCTCAACACGGTG...GTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTTCTGGGAACCTGAATTaGACCTTTTCTTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSSGNLN*TFSFGF
Trigger: AAAACCAAAAGAAAAGGTCCAATTCAGGTTCCCAGA...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp AGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGCGACTTTAATTTCGAATaGTTCCCCAAGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SLFASGPMYRVLQGSSKCDFNFE*FPKAPL
Trigger: CAGAGGAGCCTTGGGGAACCATTCGAAATTAAAGTC...GCACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATGAAGGCTTACGGACTTGTGAAGTTGCCGATTCTGTTACAAGTCAATGCACTCGTGATCATCATGAGATaGGCCTTGCAGAAGTTGACG +
Preference number: 4 (lower is better)
Translates to: MKAYGLVKLPILLQVNALVIIMR*ALQKLT
Trigger: CGTCAACTTCTGCAAGGCCCATCTCATGATGATCAC...GAGTGCATTGACTTGTAACAGAATCGGCAACTTCACAAGTCCGTAAGCCTTCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TCCTTGTTTTATGACTTAGAAAATCTGAGGTCCAGAAGAGTTGGTTGTGTGTCCGGATGTTTCCATTGCTaGGACTGGTGGCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: SLFYDLENLRSRRVGCVSGCFHC*DWWPSG
Trigger: TCCAGATGGCCACCAGTCCCAGCAATGGAAACATCC...GGACACACAACCAACTCTTCTGGACCTCAGATTTTCTAAGTCATAAAACAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 72 bp GGTCCATCTCTGAAACTGTATCTTATGTTCCCCATGTaGGGAACAGCAACTGAAGGTGAAACCACAAGAGAG +
Preference number: 4 (lower is better)
Translates to: GPSLKLYLMFPM*GTATEGETTRE
Trigger: CTCTCTTGTGGTTTCACCTTCAGTTGCTGTTCCCAACATGGGGAACATAAGATACAGTTTCAGAGATGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GTTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTGTCCTTCACCTTGTTaGCAGCCCTCAGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: VNIYSAAIPIRRHHYKHNCPSPC*QPSGDR
Trigger: CCTGTCTCCTGAGGGCTGTCAACAAGGTGAAGGACA...GTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTGAACACACAGCCATCTaGCCCGTTCACCACAGACTG +
Preference number: 4 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESEHTAI*PVHHRL
Trigger: CAGTCTGTGGTGAACGGGGCAGATGGCTGTGTGTTC...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTCTCTCTGCACACCACTaGCGTGTTCTGGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: TFIQLQYRLGDITTNTTSLSAHH*RVLDAA
Trigger: AGCAGCATCCAGAACACGGCAGTGGTGTGCAGAGAG...AGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGAAGCCATTGCTGTCTaGCAGGCAATGGTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKEAIAV*QAMVEA
Trigger: AGCTTCTACCATTGCCTGGCAGACAGCAATGGCTTC...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp CATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAATTCCCTAGCTTGGCATaGCCAAAACAGAACACACAG +
Preference number: 4 (lower is better)
Translates to: HFLLPHVGVCTFLSYGKQFPSLA*PKQNTQ
Trigger: CTGTGTGTTCTGTTTTGGCCATGCCAAGCTAGGGAA...TTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTCTGTGCCTTGGAGGCTaGAAGCTCTGTGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LTFIQLQYRLGDITTNTTLCLGG*KLCAFP
Trigger: AGGGAAGGCACAGAGCTTCCAGCCTCCAAGGCACAG...AGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTACGGACACAGAAGCAAGGATTCACTaGAGACCATGCCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: FVDFFLTSTIWTQESTDTEARIH*RPCQSP
Trigger: AGGACTCTGGCATGGTCTCCAGTGAATCCTTGCTTC...TGTGTCCGTACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTTACACCGTGTTGAGGGCTaGCCCTGTTCTTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: IYSAAIPIRRHHYKHNFLHRVEG*PCSSGP
Trigger: TGGACCAGAAGAACAGGGCCAGCCCTCAACACGGTG...TAAGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTTAAAGAAGGTAGCTGGCTaGTTCAGGGGGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: IYSAAIPIRRHHYKHNFLKKVAG*FRGLLV
Trigger: CACCAGCAGCCCCCTGAACCAGCCAGCTACCTTCTT...TAAGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GAAGGCTCTGCTTCTCTAGGAGACACACTTGTTAAAGCTACAAGATACACAGAAGACAGATTTAACTTCTaGGCAGCTCGTGCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: EGSASLGDTLVKATRYTEDRFNF*AARAKK
Trigger: CTTCTTCGCACGAGCTGCCCAGAAGTTAAATCTGTC...TTCTGTGTATCTTGTAGCTTTAACAAGTGTGTCTCCTAGAGAAGCAGAGCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 72 bp TCGACTTTTAAAATGAAGGCTTACGGACTTGTGAAGTaGCCGATTCTGTTACAAGTCAATGCACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: STFKMKAYGLVK*PILLQVNALGQ
Trigger: CTGCCCGAGTGCATTGACTTGTAACAGAATCGGCAACTTCACAAGTCCGTAAGCCTTCATTTTAAAAGTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTTAGCTCCTCCACCAGTGTaGAGACCAACTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: IYSAAIPIRRHHYKHNFLAPPPV*RPTHPH
Trigger: GTGAGGATGAGTTGGTCTTCACACTGGTGGAGGAGC...TAAGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp ACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTAGCATTCGTAGTGGCTaGCTGTTGTCCTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: TFIQLQYRLGDITTNTTSSIRSG*LLSCQE
Trigger: CTCTTGGCAGGACAACAGTCAGCCACTACGAATGCT...AGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTAGGCTGGAAGCTCTGTaGCTTCCCTCTCGGTCAATT +
Preference number: 4 (lower is better)
Translates to: TFIQLQYRLGDITTNTTSRLEAL*LPSRSI
Trigger: AATTGACCGAGAGGGAAGGCACAGAGCTTCCAGCCT...AGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTTATCCAGGGAATCCAGCTaGAGGACCTGCTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: IYSAAIPIRRHHYKHNFLSRESS*RTCSKS
Trigger: TGACTTGGAGCAGGTCCTGCAGCTGGATTCCCTGGA...TAAGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTACGGACACATTCCCTAGCTTGGCATaGCCAAAACAGAACACACAG +
Preference number: 4 (lower is better)
Translates to: FVDFFLTSTIWTQESTDTFPSLA*PKQNTQ
Trigger: CTGTGTGTTCTGTTTTGGCCATGCCAAGCTAGGGAA...TGTGTCCGTACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACGCTGTGTGCCACAGATaGGGTCTTCACAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: VNIYSAAIPIRRHHYKHNAVCHR*GLHRGT
Trigger: TGTACCTCTGTGAAGACCCCATCTGTGGCACACAGC...GTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAACGAAGGGAAACTTACTaGGTTCTTCGCTGCCATCTA +
Preference number: 4 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKRRETY*VLRCHL
Trigger: TAGATGGCAGCGAAGAACCCAGTAAGTTTCCCTTCG...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTCGCTCCCGGCAGACATaGATTTCTTCAAAACCTGGG +
Preference number: 4 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESRSRQT*ISSKPG
Trigger: CCCAGGTTTTGAAGAAATCCATGTCTGCCGGGAGCG...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTGGGGATCATACAAGGTaGTCTGCTTCTTCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: LTFIQLQYRLGDITTNTTGDHTR*SASSVG
Trigger: ACCCACGGAAGAAGCAGATCACCTTGTATGATCCCC...AGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GTTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTCCCCCAGAGGAGCTTaGTGTGTACTTGGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VNIYSAAIPIRRHHYKHNSPRGA*CVLGLL
Trigger: AAGAAGACCAAGTACACATCAAGCTCCTCTGGGGGA...GTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp GTTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACAGATTTTGCAGCCTTTaGTGGGAGCGGCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: VNIYSAAIPIRRHHYKHNRFCSL*WERLCC
Trigger: GCAACAAAGCCGCTCCCATCAAAGGCTGCAAAATCT...GTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTTATCCTGCCAAGAGAGTTaGTTCTGCTGGCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: IYSAAIPIRRHHYKHNFLSCQES*FCWPAV
Trigger: AACAGCTGGCCAGCAGAAGCAACTCTCTTGGCAGGA...TAAGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCCAGCATCAGGTACTaGTTGGTCGCTTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LTFIQLQYRLGDITTNTTSSIRY*LVASSS
Trigger: GGAGCTAGAAGCGACCAAGCAGTACCTGATGCTGGA...AGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTTCAAACCAGCAATCAAAACAGATGTTCAAAGTATTGGCACCCCTATGGGTGTATTTGGATGGCTTCCTaGTTTAGCTGGTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: FQTSNQNRCSKYWHPYGCIWMAS*FSWFRC
Trigger: ACACCTGAACCAGCTAAAGCAGGAAGCCATCCAAAT...ACACCCATAGGGGTGCCAATACTTTGAACATCTGTTTTGATTGCTGGTTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTTGCAAGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCCCAAGAAATAGCACATaGAATAATGCCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: FARHLIHHSGSSCWCFVLPRNST*NNAQVL
Trigger: CAGAACCTGGGCATTATTCCATGTGCTATTTCTTGG...GAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCTTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTTATGGGCTATGAAGCTGTaGCATGACTGCTCGCCATCA +
Preference number: 4 (lower is better)
Translates to: IYSAAIPIRRHHYKHNFLWAMKL*HDCSPS
Trigger: TGATGGCGAGCAGTCATGCCACAGCTTCATAGCCCA...TAAGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp ATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTTAATAATGCCCAGGTTCTaGATAGAGTCGTCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: IYSAAIPIRRHHYKHNFLIMPRF*IESSLP
Trigger: CGGAAGGGACGACTCTATGCAGAACCTGGGCATTAT...TAAGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR GCA 90 bp TTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCCAGCTGCAGGACCTaGTCCAAGTCAAATTCACGA +
Preference number: 4 (lower is better)
Translates to: LTFIQLQYRLGDITTNTTSSCRT*SKSNSR
Trigger: TCGTGAATTTGACTTGGAGCAGGTCCTGCAGCTGGA...AGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR TCA 90 bp TTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTATCCAGTTCCTGCTCTaGCTTACCTTCAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LTFIQLQYRLGDITTNTTIQFLL*LTFSLQ
Trigger: CTGAAGACTGAAGGTAAGTCAGAGCAGGAACTGGAT...AGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp TTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTATCTTCGGAGGAACCTaGCTGCTTCTTTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LTFIQLQYRLGDITTNTTIFGGT*LLLFWK
Trigger: CTTCCAGAAAAGAAGCAGCCAGGTTCCTCCGAAGAT...AGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp GTTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACAGGATTTCCCTAGCTTaGCATGGCCAAAACAGAACA +
Preference number: 4 (lower is better)
Translates to: VNIYSAAIPIRRHHYKHNRISLA*HGQNRT
Trigger: TGTTCTGTTTTGGCCATGCCAAGCTAGGGAAATCCT...GTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAAGCTTGATGTGTACTTaGTCTTCTTCTTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKSLMCT*SSSSSS
Trigger: GGATGAAGAAGAAGAAGACCAAGTACACATCAAGCT...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CCA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAATCTGGGAACCTGAATTaGACCTTTTCTTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKSGNLN*TFSFGF
Trigger: AAAACCAAAAGAAAAGGTCCAATTCAGGTTCCCAGA...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
3UTR CAA 72 bp AAATGGCTTCGTAATGTTGTAAAGAGGTTACTGATGTaGTCCAGGAGAGTGGTAATCTATATACTGTACAAG +
Preference number: 4 (lower is better)
Translates to: KWLRNVVKRLLM*SRRVVIYILYK
Trigger: CTTGTACAGTATATAGATTACCACTCTCCTGGACAACATCAGTAACCTCTTTACAACATTACGAAGCCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
3UTR CAA 72 bp TTAAAGATAAACTACCCTAAAAGGGAGGAAATGTTTTaGCATATGTCCCAAGGAAAGAACAACATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LKINYPKREEMF*HMSQGKNNIQE
Trigger: TTCCTGAATGTTGTTCTTTCCTTGGGACATATGCAAAAACATTTCCTCCCTTTTAGGGTAGTTTATCTTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS GCA 90 bp TGCGGGCTTGTCCTCCGAGGGAGCCCCACTGCGCTCTTCCGCCTCTaGCCGCAGCTGTGCACTCCTCGGGCCCGCACTGCCCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: CGLVLRGSPTALFRL*PQLCTPRARTALEQ
Trigger: CTGCTCCAGGGCAGTGCGGGCCCGAGGAGTGCACAGCTGCGGGCAGAGGCGGAAGAGCGCAGTGGGGCTCCCTCGGAGGACAAGCCCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp ACGCCGGCTGCCCGCGTCCCGAGCCTTCTCATCCAGGCCCAGCTTTaGGAGAGGCAGGAACTGCGTGATGCTCACCTCGGAGACGGGGGC +
Preference number: 5 (lower is better)
Translates to: TPAARVPSLLIQAQL*ERQELRDAHLGDGG
Trigger: GCCCCCGTCTCCGAGGTGAGCATCACGCAGTTCCTGCCTCTCCCAAAGCTGGGCCTGGATGAGAAGGCTCGGGACGCGGGCAGCCGGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp TCCGCCTCTGCCCGCAGCTGTGCACTCCTCGGGCCCGCACTGCCCTaGAGCAGCTCCGAAATGCGCCCGTTGACCGCTCTTAGCGGCAGT +
Preference number: 5 (lower is better)
Translates to: SASARSCALLGPALP*SSSEMRPLTALSGS
Trigger: ACTGCCGCTAAGAGCGGTCAACGGGCGCATTTCGGAGCTGCTCCAGGGCAGTGCGGGCCCGAGGAGTGCACAGCTGCGGGCAGAGGCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 90 bp TCCTCGGGCCCGCACTGCCCTGGAGCAGCTCCGAAATGCGCCCGTTaGCCGCTCTTAGCGGCAGTTTGGAAGCCAGCCCAGAGCCCCGGT +
Preference number: 5 (lower is better)
Translates to: SSGPHCPGAAPKCAR*PLLAAVWKPAQSPG
Trigger: ACCGGGGCTCTGGGCTGGCTTCCAAACTGCCGCTAAGAGCGGTCAACGGGCGCATTTCGGAGCTGCTCCAGGGCAGTGCGGGCCCGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 90 bp CTGGGAGGTACTGTGCTGGCTACTGCTGCCCGGGATGCTCCGTGGTaGGGCTGGACTGGGGCTGCTGCTGCGTGTCACAGTAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LGGTVLATAARDAPW*GWTGAAAACHSRGR
Trigger: CCTGCCCCTACTGTGACACGCAGCAGCAGCCCCAGTCCAGCCTCACCACGGAGCATCCCGGGCAGCAGTAGCCAGCACAGTACCTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp TGCTGGCTGCAGCCTCTGCTGCCTCCCCCGGCCGGCTGTCACCTCTaGTCTTCTGTAGGGCTGGCACAATGGGCACAAAGTCTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: CWLQPLLPPPAGCHL*SSVGLAQWAQSLGA
Trigger: GGCCCCCAGACTTTGTGCCCATTGTGCCAGCCCTACAGAAGACCAGAGGTGACAGCCGGCCGGGGGAGGCAGCAGAGGCTGCAGCCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GAGGGCTTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATAGGGGGCTGCTGGTGTaGCTGCTGCCACCACCGTGT +
Preference number: 5 (lower is better)
Translates to: EGLGGRCPAEVLGERGPDRGLLV*LLPPPC
Trigger: ACACGGTGGTGGCAGCAGCAACACCAGCAGCCCCCT...ATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAAGCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp TCGCCTCGAGGCAATGGCGGCGTCCAGGAAGAAGGCAGCTTTCTCTaGGGTGGGGGCCCGGAGCTCACTCTGGTTCTGCAGCTGTGTGCC +
Preference number: 5 (lower is better)
Translates to: SPRGNGGVQEEGSFL*GGGPELTLVLQLCA
Trigger: GGCACACAGCTGCAGAACCAGAGTGAGCTCCGGGCCCCCACCGCAGAGAAAGCTGCCTTCTTCCTGGACGCCGCCATTGCCTCGAGGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp CGGCTGCTCTGGAGACTGGGGCTCTGTGTGAGCTGGGAGGTACTGTaGTGGCTACTGCTGCCCGGGATGCTCCGTGGTGAGGCTGGACTG +
Preference number: 5 (lower is better)
Translates to: RLLWRLGLCVSWEVL*WLLLPGMLRGEAGL
Trigger: CAGTCCAGCCTCACCACGGAGCATCCCGGGCAGCAGTAGCCAGCACAGTACCTCCCAGCTCACACAGAGCCCCAGTCTCCAGAGCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp TGCTGCGACCCAGGCTCCTCCCAGTGCGGGGCATGGTACTATCTTTaGCGGCATGCATGCGGGAGCTCACCGACGACAGGCTTTCGGCCC +
Preference number: 5 (lower is better)
Translates to: CCDPGSSQCGAWYYL*RHACGSSPTTGFRP
Trigger: GGGCCGAAAGCCTGTCGTCGGTGAGCTCCCGCATGCATGCCGGCAAAGATAGTACCATGCCCCGCACTGGGAGGAGCCTGGGTCGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp AGCTGGGTGGTGAGGCGCCAGTGCTGCGACCCAGGCTCCTCCCAGTaGGGGGCATGGTACTATCTTTGCCGGCATGCATGCGGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: SWVVRRQCCDPGSSQ*GAWYYLCRHACGSS
Trigger: TGAGCTCCCGCATGCATGCCGGCAAAGATAGTACCATGCCCCGCACTGGGAGGAGCCTGGGTCGCAGCACTGGCGCCTCACCACCCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp GGGTCCTTTCCCGGGAGGGGTCCCGGCAGCAGCAGCTTGAGAGCCTaGCTCTTCAGCTCCACCAAGCGGGCGTTACAGTTCTCGCACCAG +
Preference number: 5 (lower is better)
Translates to: GSFPGRGPGSSSLRA*LFSSTKRALQFSHQ
Trigger: CTGGTGCGAGAACTGTAACGCCCGCTTGGTGGAGCTGAAGAGGCAGGCTCTCAAGCTGCTGCTGCCGGGACCCCTCCCGGGAAAGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CCA 90 bp CTGCTCTGGAGACTGGGGCTCTGTGTGAGCTGGGAGGTACTGTGCTaGCTACTGCTGCCCGGGATGCTCCGTGGTGAGGCTGGACTGGGG +
Preference number: 5 (lower is better)
Translates to: LLWRLGLCVSWEVLC*LLLPGMLRGEAGLG
Trigger: CCCCAGTCCAGCCTCACCACGGAGCATCCCGGGCAGCAGTAGCCAGCACAGTACCTCCCAGCTCACACAGAGCCCCAGTCTCCAGAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GTGAGGCGCCAGTGCTGCGACCCAGGCTCCTCCCAGTGCGGGGCATaGTACTATCTTTGCCGGCATGCATGCGGGAGCTCACCGACGACA +
Preference number: 5 (lower is better)
Translates to: VRRQCCDPGSSQCGA*YYLCRHACGSSPTT
Trigger: TGTCGTCGGTGAGCTCCCGCATGCATGCCGGCAAAGATAGTACCATGCCCCGCACTGGGAGGAGCCTGGGTCGCAGCACTGGCGCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp CCCTGGGCTGCTGGAGCCCACCCATGTGGCGAGACCCCACCAGTGTaGGAATGCTGGAGATCGGAGGGGGTGAGCCCAGAGAGGTGTCAT +
Preference number: 5 (lower is better)
Translates to: PWAAGAHPCGETPPV*ECWRSEGVSPERCH
Trigger: ATGACACCTCTCTGGGCTCACCCCCTCCGATCTCCAGCATTCCCACACTGGTGGGGTCTCGCCACATGGGTGGGCTCCAGCAGCCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS TCA 90 bp CCTCGGGGAGCCCATGGGTCTGGGCTTGCCCTCCACGAAGCCACATaGGTTCAGACTCTCCCGGCTGCTCTGGAGACTGGGGCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: PRGAHGSGLALHEAT*VQTLPAALETGALC
Trigger: ACACAGAGCCCCAGTCTCCAGAGCAGCCGGGAGAGTCTGAACTCATGTGGCTTCGTGGAGGGCAAGCCCAGACCCATGGGCTCCCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp CCCAGGCTCCTCCCAGTGCGGGGCATGGTACTATCTTTGCCGGCATaGATGCGGGAGCTCACCGACGACAGGCTTTCGGCCCTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: PRLLPVRGMVLSLPA*MRELTDDRLSALSN
Trigger: GTTGGAGAGGGCCGAAAGCCTGTCGTCGGTGAGCTCCCGCATGCATGCCGGCAAAGATAGTACCATGCCCCGCACTGGGAGGAGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp GGGCAGTCTTCCCCATGGCAGGTGGTAGCTCCCCACTCAGGACACTaGTGTTATCACTACCGTGCCCGCTGCTGCAGCGGTGCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GQSSPWQVVAPHSGH*CYHYRARCCSGAAS
Trigger: GGAAGCCGCACCGCTGCAGCAGCGGGCACGGTAGTGATAACAGCAGTGTCCTGAGTGGGGAGCTACCACCTGCCATGGGGAAGACTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GACAGTGGGGCAAGGGGGAATTCTGGATCCACCGGAGCCCGGGCATaGAAGGGTCTCAGCTGGGTGGGCCTGCGCATTCTGCCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: DSGARGNSGSTGARA*KGLSWVGLRILPSS
Trigger: TGAGGAAGGCAGAATGCGCAGGCCCACCCAGCTGAGACCCTTCCATGCCCGGGCTCCGGTGGATCCAGAATTCCCCCTTGCCCCACTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GGCAGTTTGGAAGCCAGCCCAGAGCCCCGGTTCCTGCTGAGCGACTaGGTGGACCAGGACATGTGTTTCCCGCTGGGCGGTAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: GSLEASPEPRFLLSD*VDQDMCFPLGGRLE
Trigger: CTCCAACCTACCGCCCAGCGGGAAACACATGTCCTGGTCCACCCAGTCGCTCAGCAGGAACCGGGGCTCTGGGCTGGCTTCCAAACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATGGCTCAGGGTCCCTTTGGGCCTaGCCAGGACGCAATGCTTGG +
Preference number: 5 (lower is better)
Translates to: LGGRCPAEVLGERGPDGSGSLWA*PGRNAW
Trigger: CCAAGCATTGCGTCCTGGCAAGGCCCAAAGGGACCC...TGAGCCATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp GGGGAGTGCGCACGTCGGGCTGAAGCAAGGATTCACTGGAGACCATaGCAGAGTCCTTGCTCAGGGAAGGTGGTGGGGCAGAGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: GECARRAEARIHWRP*QSPCSGKVVGQRRA
Trigger: TGCCCTCCTCTGCCCCACCACCTTCCCTGAGCAAGGACTCTGGCATGGTCTCCAGTGAATCCTTGCTTCAGCCCGACGTGCGCACTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp GGCTCCTCCCAGTGCGGGGCATGGTACTATCTTTGCCGGCATGCATaGGGGAGCTCACCGACGACAGGCTTTCGGCCCTCTCCAACGACA +
Preference number: 5 (lower is better)
Translates to: GSSQCGAWYYLCRHA*GSSPTTGFRPSPTT
Trigger: TGTCGTTGGAGAGGGCCGAAAGCCTGTCGTCGGTGAGCTCCCGCATGCATGCCGGCAAAGATAGTACCATGCCCCGCACTGGGAGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp GCAGGTGGTAGCTCCCCACTCAGGACACTGCTGTTATCACTACCGTaGCCGCTGCTGCAGCGGTGCGGCTTCCTCGGAGGGGTGATCTTG +
Preference number: 5 (lower is better)
Translates to: AGGSSPLRTLLLSLP*PLLQRCGFLGGVIL
Trigger: CAAGATCACCCCTCCGAGGAAGCCGCACCGCTGCAGCAGCGGGCACGGTAGTGATAACAGCAGTGTCCTGAGTGGGGAGCTACCACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GGAGGAGTAGTCAGGATCACTGGACAGTGGGGCAAGGGGGAATTCTaGATCCACCGGAGCCCGGGCATGGAAGGGTCTCAGCTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GGVVRITGQWGKGEF*IHRSPGMEGSQLGG
Trigger: CCCACCCAGCTGAGACCCTTCCATGCCCGGGCTCCGGTGGATCCAGAATTCCCCCTTGCCCCACTGTCCAGTGATCCTGACTACTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp TTCAGACTCTCCCGGCTGCTCTGGAGACTGGGGCTCTGTGTGAGCTaGGAGGTACTGTGCTGGCTACTGCTGCCCGGGATGCTCCGTGGT +
Preference number: 5 (lower is better)
Translates to: FRLSRLLWRLGLCVS*EVLCWLLLPGMLRG
Trigger: ACCACGGAGCATCCCGGGCAGCAGTAGCCAGCACAGTACCTCCCAGCTCACACAGAGCCCCAGTCTCCAGAGCAGCCGGGAGAGTCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GAGGCTGGGGGTTCTGCCATGGCTTCCCCATGCCCAAAGCACGTCTaGGCTATGAAGCTGTGGCATGACTGCTCGCCATCACTGCCCGCG +
Preference number: 5 (lower is better)
Translates to: EAGGSAMASPCPKHV*AMKLWHDCSPSLPA
Trigger: CGCGGGCAGTGATGGCGAGCAGTCATGCCACAGCTTCATAGCCCAGACGTGCTTTGGGCATGGGGAAGCCATGGCAGAACCCCCAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GTGCGAAGAAGGAAGCGGCCACTGAGGTCCCTGTGGAAGTCTCACTaGCCACACAGGAACCCTGTGGGGCTGGGACACTGCTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VRRRKRPLRSLWKSH*PHRNPVGLGHCWLQ
Trigger: CTGCAGCCAGCAGTGTCCCAGCCCCACAGGGTTCCTGTGTGGCCAGTGAGACTTCCACAGGGACCTCAGTGGCCGCTTCCTTCTTCGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CCA 90 bp TCTGGGCAGCTCGTGCGAAGAAGGAAGCGGCCACTGAGGTCCCTGTaGAAGTCTCACTGGCCACACAGGAACCCTGTGGGGCTGGGACAC +
Preference number: 5 (lower is better)
Translates to: SGQLVRRRKRPLRSL*KSHWPHRNPVGLGH
Trigger: GTGTCCCAGCCCCACAGGGTTCCTGTGTGGCCAGTGAGACTTCCACAGGGACCTCAGTGGCCGCTTCCTTCTTCGCACGAGCTGCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GAGGGCTTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATCAGCTCCAGGGGCTGTaGCACAGTCACCATTGTGGT +
Preference number: 5 (lower is better)
Translates to: EGLGGRCPAEVLGERGPDQLQGL*HSHHCG
Trigger: ACCACAATGGTGACTGTGCAACAGCCCCTGGAGCTG...ATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAAGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GAGGGCTTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATGAGAAGCTGAGGGTTTaGGTGGTGGAGGTGGACAGG +
Preference number: 5 (lower is better)
Translates to: EGLGGRCPAEVLGERGPDEKLRV*VVEVDR
Trigger: CCTGTCCACCTCCACCACCAAAACCCTCAGCTTCTC...ATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAAGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTGGAGCAGGCAGTGGCCATGGACCAGAATCAGGTGGCCAGGAGAGACAGCAAGCCCGGCAGCAGCAGCTaGAGAGCCTGCCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VEQAVAMDQNQVARRDSKPGSSS*RACLFS
Trigger: GCTGAAGAGGCAGGCTCTCAAGCTGCTGCTGCCGGG...CTTGCTGTCTCTCCTGGCCACCTGATTCTGGTCCATGGCCACTGCCTGCTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS TCA 90 bp GGCTTCCCCATGCCCAAAGCACGTCTGGGCTATGAAGCTGTGGCATaGCTGCTCGCCATCACTGCCCGCGCTCATCTCGCTCAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: GFPMPKARLGYEAVA*LLAITARAHLAQPG
Trigger: TCCTGGCTGAGCGAGATGAGCGCGGGCAGTGATGGCGAGCAGTCATGCCACAGCTTCATAGCCCAGACGTGCTTTGGGCATGGGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 90 bp CCTCGGGCTTCTCTCTGCACACCACTGCCGTGTTCTGGATGCTGCTaGCAAACTCCGAGGCTGGGGGTTCTGCCATGGCTTCCCCATGCC +
Preference number: 5 (lower is better)
Translates to: PRASLCTPLPCSGCC*QTPRLGVLPWLPHA
Trigger: GGCATGGGGAAGCCATGGCAGAACCCCCAGCCTCGGAGTTTGTCAGCAGCATCCAGAACACGGCAGTGGTGTGCAGAGAGAAGCCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 90 bp GGCTGGTTCAGGGGGCTGCTGGTGTTGCTGCTGCCACCACCGTGTTaGGGGCTGGCCCTGTTCTTCTGGTCCAAGCTAGACTTGCGGACA +
Preference number: 5 (lower is better)
Translates to: GWFRGLLVLLLPPPC*GLALFFWSKLDLRT
Trigger: TGTCCGCAAGTCTAGCTTGGACCAGAAGAACAGGGCCAGCCCTCAACACGGTGGTGGCAGCAGCAACACCAGCAGCCCCCTGAACCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 90 bp AGAAAGCAGGGTCCTTTCCCGGGAGGGGTCCCGGCAGCAGCAGCTTaGGAGCCTGCCTCTTCAGCTCCACCAAGCGGGCGTTACAGTTCT +
Preference number: 5 (lower is better)
Translates to: RKQGPFPGGVPAAAA*EPASSAPPSGRYSS
Trigger: AGAACTGTAACGCCCGCTTGGTGGAGCTGAAGAGGCAGGCTCTCAAGCTGCTGCTGCCGGGACCCCTCCCGGGAAAGGACCCTGCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS TCA 90 bp GGGCTGGGACACTGCTGGCTGCAGGCTTGTCAGCATTGTAGCGGTTaGGCGCTGACTCTGTCAGTCCCTCGCGGCCGGTCTCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: GLGHCWLQACQHCSG*ALTLSVPRGRSLSS
Trigger: TGATGACAGAGACCGGCCGCGAGGGACTGACAGAGTCAGCGCTCAACCGCTACAATGCTGACAAGCCTGCAGCCAGCAGTGTCCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS GCA 90 bp TGTGTGCCACAGATGGGGTCTTCACAGAGGTACACGCCTGGGGACTaGCCGTCCTGTAGGCTGCCCGTGGCCACCTCAGACAACAGGTCT +
Preference number: 5 (lower is better)
Translates to: CVPQMGSSQRYTPGD*PSCRLPVATSDNRS
Trigger: AGACCTGTTGTCTGAGGTGGCCACGGGCAGCCTACAGGACGGGCAGTCCCCAGGCGTGTACCTCTGTGAAGACCCCATCTGTGGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp ACAGACTGGCAATGCCTAGCCTCGGGGAGCCCATGGGTCTGGGCTTaGCCTCCACGAAGCCACATGAGTTCAGACTCTCCCGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: TDWQCLASGSPWVWA*PPRSHMSSDSPGCS
Trigger: AGAGCAGCCGGGAGAGTCTGAACTCATGTGGCTTCGTGGAGGGCAAGCCCAGACCCATGGGCTCCCCGAGGCTAGGCATTGCCAGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp TCCCCATGCCCAAAGCACGTCTGGGCTATGAAGCTGTGGCATGACTaGTCGCCATCACTGCCCGCGCTCATCTCGCTCAGCCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SPCPKHVWAMKLWHD*SPSLPALISLSQEL
Trigger: CAGCTCCTGGCTGAGCGAGATGAGCGCGGGCAGTGATGGCGAGCAGTCATGCCACAGCTTCATAGCCCAGACGTGCTTTGGGCATGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp GAGCAGGTTGTCAGGGCCCACCTCGGGCTTCTCTCTGCACACCACTaGCGTGTTCTGGATGCTGCTGACAAACTCCGAGGCTGGGGGTTC +
Preference number: 5 (lower is better)
Translates to: EQVVRAHLGLLSAHH*RVLDAADKLRGWGF
Trigger: GAACCCCCAGCCTCGGAGTTTGTCAGCAGCATCCAGAACACGGCAGTGGTGTGCAGAGAGAAGCCCGAGGTGGGCCCTGACAACCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp CACAGAGGTACACGCCTGGGGACTGCCCGTCCTGTAGGCTGCCCGTaGCCACCTCAGACAACAGGTCTCGAAGGTTCTCCTCTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: HRGTRLGTARPVGCP*PPQTTGLEGSPLFP
Trigger: GGGGAAAAGAGGAGAACCTTCGAGACCTGTTGTCTGAGGTGGCCACGGGCAGCCTACAGGACGGGCAGTCCCCAGGCGTGTACCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GGTCATCCTCGTCACAATCCTGTTGGTTGCTTCGCCTCGAGGCAATaGCGGCGTCCAGGAAGAAGGCAGCTTTCTCTGCGGTGGGGGCCC +
Preference number: 5 (lower is better)
Translates to: GHPRHNPVGCFASRQ*RRPGRRQLSLRWGP
Trigger: GGGCCCCCACCGCAGAGAAAGCTGCCTTCTTCCTGGACGCCGCCATTGCCTCGAGGCGAAGCAACCAACAGGATTGTGACGAGGATGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GCCATGGCTTCCCCATGCCCAAAGCACGTCTGGGCTATGAAGCTGTaGCATGACTGCTCGCCATCACTGCCCGCGCTCATCTCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: AMASPCPKHVWAMKL*HDCSPSLPALISLS
Trigger: GCTGAGCGAGATGAGCGCGGGCAGTGATGGCGAGCAGTCATGCCACAGCTTCATAGCCCAGACGTGCTTTGGGCATGGGGAAGCCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GCACACCACTGCCGTGTTCTGGATGCTGCTGACAAACTCCGAGGCTaGGGGTTCTGCCATGGCTTCCCCATGCCCAAAGCACGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: AHHCRVLDAADKLRG*GFCHGFPMPKARLG
Trigger: GCCCAGACGTGCTTTGGGCATGGGGAAGCCATGGCAGAACCCCCAGCCTCGGAGTTTGTCAGCAGCATCCAGAACACGGCAGTGGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp TCAGGGCCCACCTCGGGCTTCTCTCTGCACACCACTGCCGTGTTCTaGATGCTGCTGACAAACTCCGAGGCTGGGGGTTCTGCCATGGCT +
Preference number: 5 (lower is better)
Translates to: SGPTSGFSLHTTAVF*MLLTNSEAGGSAMA
Trigger: AGCCATGGCAGAACCCCCAGCCTCGGAGTTTGTCAGCAGCATCCAGAACACGGCAGTGGTGTGCAGAGAGAAGCCCGAGGTGGGCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GGGTTCCTTGCTTTCCTGGGCCTGGGATGCTTTGGGGCTCACCTTTaGGGTGGCAGTGGAGGACTCAGGCTCTTGCACGTTTCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: GFLAFLGLGCFGAHL*GGSGGLRLLHVSGA
Trigger: AGCCCCCGAAACGTGCAAGAGCCTGAGTCCTCCACTGCCACCCCAAAGGTGAGCCCCAAAGCATCCCAGGCCCAGGAAAGCAAGGAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTGGAGCAGGCAGTGGCCATGGACCAGAATCAGGTGGCCAGGAGAGACAGCAAGCCCATGGGTCTGGGCTaGCCCTCCACGAAGCCACAT +
Preference number: 5 (lower is better)
Translates to: VEQAVAMDQNQVARRDSKPMGLG*PSTKPH
Trigger: ATGTGGCTTCGTGGAGGGCAAGCCCAGACCCATGGG...CTTGCTGTCTCTCCTGGCCACCTGATTCTGGTCCATGGCCACTGCCTGCTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATGGCTCAATGGGAGCGGCTTTGTaGCCAGACTCTTCCCCCATC +
Preference number: 5 (lower is better)
Translates to: LGGRCPAEVLGERGPDGSMGAAL*PDSSPI
Trigger: GATGGGGGAAGAGTCTGGCAACAAAGCCGCTCCCAT...TGAGCCATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 90 bp GGGGTTCTGCCATGGCTTCCCCATGCCCAAAGCACGTCTGGGCTATaGAGCTGTGGCATGACTGCTCGCCATCACTGCCCGCGCTCATCT +
Preference number: 5 (lower is better)
Translates to: GVLPWLPHAQSTSGL*SCGMTARHHCPRSS
Trigger: AGATGAGCGCGGGCAGTGATGGCGAGCAGTCATGCCACAGCTTCATAGCCCAGACGTGCTTTGGGCATGGGGAAGCCATGGCAGAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 90 bp GACACTGCTGGCTGCAGGCTTGTCAGCATTGTAGCGGTTGAGCGCTaGCTCTGTCAGTCCCTCGCGGCCGGTCTCTGTCATCAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: DTAGCRLVSIVAVER*LCQSLAAGLCHQLG
Trigger: TCCCAGCTGATGACAGAGACCGGCCGCGAGGGACTGACAGAGTCAGCGCTCAACCGCTACAATGCTGACAAGCCTGCAGCCAGCAGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS GCA 90 bp GGTCTTCACAGAGGTACACGCCTGGGGACTGCCCGTCCTGTAGGCTaGCCGTGGCCACCTCAGACAACAGGTCTCGAAGGTTCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: GLHRGTRLGTARPVG*PWPPQTTGLEGSPL
Trigger: AAGAGGAGAACCTTCGAGACCTGTTGTCTGAGGTGGCCACGGGCAGCCTACAGGACGGGCAGTCCCCAGGCGTGTACCTCTGTGAAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp GCAGCTCAGCAAACGTATTGCACTTCAGACAGTCCCTTTCTGACTTaGTGGCTGCAGCCTCTGCTGCCTCCCCCGGCCGGCTGTCACCTC +
Preference number: 5 (lower is better)
Translates to: AAQQTYCTSDSPFLT*WLQPLLPPPAGCHL
Trigger: GAGGTGACAGCCGGCCGGGGGAGGCAGCAGAGGCTGCAGCCAGCAAGTCAGAAAGGGACTGTCTGAAGTGCAATACGTTTGCTGAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp CAGAGGGTGTGTCTGGCCCCACTGCTTGGCTTAAAGGAGCACATCTaGCAGCTTGCTCCGGCCCGAACTGGATGGGCAGCTCTTCGAAGG +
Preference number: 5 (lower is better)
Translates to: QRVCLAPLLGLKEHI*QLAPARTGWAALRR
Trigger: CCTTCGAAGAGCTGCCCATCCAGTTCGGGCCGGAGCAAGCTGGCAGATGTGCTCCTTTAAGCCAAGCAGTGGGGCCAGACACACCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp GCAGAAGTTGACGCGGCTCTCCAAGCGCTCTGTCACACCCTCCAGTaGCTCCAGGTACTCCAGGGAATCCAGCTGCAGGACCTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: AEVDAALQALCHTLQ*LQVLQGIQLQDLLQ
Trigger: TTGGAGCAGGTCCTGCAGCTGGATTCCCTGGAGTACCTGGAGGCACTGGAGGGTGTGACAGAGCGCTTGGAGAGCCGCGTCAACTTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GGGTCTCCGCGTAGCTGCTGGCTGCGGCCGAGATGTGTGCGATCATaGTGGTGCGACAGTTCACATTCCCCAGAGACTCCCTCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: GSPRSCWLRPRCVRS*WCDSSHSPETPSEA
Trigger: TGCTTCTGAGGGAGTCTCTGGGGAATGTGAACTGTCGCACCACCATGATCGCACACATCTCGGCCGCAGCCAGCAGCTACGCGGAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp TTCCAACTGGGGGAGTGCGCACGTCGGGCTGAAGCAAGGATTCACTaGAGACCATGCCAGAGTCCTTGCTCAGGGAAGGTGGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: FQLGECARRAEARIH*RPCQSPCSGKVVGQ
Trigger: CTGCCCCACCACCTTCCCTGAGCAAGGACTCTGGCATGGTCTCCAGTGAATCCTTGCTTCAGCCCGACGTGCGCACTCCCCCAGTTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GTGGACCAGGACATGTGTTTCCCGCTGGGCGGTAGGTTGGAGCTCTaGCCCACAGACTGTGGCAGGGACTTGGTGGAGAAGCTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: VDQDMCFPLGGRLEL*PTDCGRDLVEKLRV
Trigger: AACCCTCAGCTTCTCCACCAAGTCCCTGCCACAGTCTGTGGGCCAGAGCTCCAACCTACCGCCCAGCGGGAAACACATGTCCTGGTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp AAGCCTTGCGGTACCAGCTCTCAGGAGAGCAGGGCGCTGAGGGCTTaGTGGGCGAGCACATTTCGTTCACCCCGTATTTCTTGCCCCTGG +
Preference number: 5 (lower is better)
Translates to: KPCGTSSQESRALRA*WASTFRSPRISCPW
Trigger: CCAGGGGCAAGAAATACGGGGTGAACGAAATGTGCTCGCCCACCAAGCCCTCAGCGCCCTGCTCTCCTGAGAGCTGGTACCGCAAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TTGGGAGGGCGGTGTCCTGCTGAAGTCCTGGGGGAGAGAGGGCCTGATGGCTCAATGTGCTTGCTCCCGTaGACCAAAGCCAGGATGACG +
Preference number: 5 (lower is better)
Translates to: LGGRCPAEVLGERGPDGSMCLLP*TKARMT
Trigger: CGTCATCCTGGCTTTGGTCAACGGGAGCAAGCACAT...TGAGCCATCAGGCCCTCTCTCCCCCAGGACTTCAGCAGGACACCGCCCTCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GAAAGCAAACCCCAGCTCCCTCAGAGCAACCGCACCTATCCCCTGGCCCAGGTGTTCACCCCGTATTTCTaGCCCCTGGTGGAGACCGCA +
Preference number: 5 (lower is better)
Translates to: ESKPQLPQSNRTYPLAQVFTPYF*PLVETA
Trigger: TGCGGTCTCCACCAGGGGCAAGAAATACGGGGTGAA...CACCTGGGCCAGGGGATAGGTGCGGTTGCTCTGAGGGAGCTGGGGTTTGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS TCA 90 bp GCTCCCGTTGACCAAAGCCAGGATGACGTTGCCCAGAGCAGACAGTaGGAGGCACAGCCCCGAGCCTCCTTCTCGGTTTTTGCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: APVDQSQDDVAQSRQ*EAQPRASFSVFAES
Trigger: GCTCTCAGCAAAAACCGAGAAGGAGGCTCGGGGCTGTGCCTCTCACTGTCTGCTCTGGGCAACGTCATCCTGGCTTTGGTCAACGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp GAGAACTGGGAGGTTTGTACTCTGAGGTCTTGGACAGACTGGCAATaGCTAGCCTCGGGGAGCCCATGGGTCTGGGCTTGCCCTCCACGA +
Preference number: 5 (lower is better)
Translates to: ENWEVCTLRSWTDWQ*LASGSPWVWACPPR
Trigger: TCGTGGAGGGCAAGCCCAGACCCATGGGCTCCCCGAGGCTAGGCATTGCCAGTCTGTCCAAGACCTCAGAGTACAAACCTCCCAGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp CTGCTGACAAACTCCGAGGCTGGGGGTTCTGCCATGGCTTCCCCATaGCCAAAGCACGTCTGGGCTATGAAGCTGTGGCATGACTGCTCG +
Preference number: 5 (lower is better)
Translates to: LLTNSEAGGSAMASP*PKHVWAMKLWHDCS
Trigger: CGAGCAGTCATGCCACAGCTTCATAGCCCAGACGTGCTTTGGGCATGGGGAAGCCATGGCAGAACCCCCAGCCTCGGAGTTTGTCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp CTGCCTCTGAGCTGCTGCTGCTCAGCCTGTTGCCTGAGCTGGGCCTaGCATCCAGTTCCTGCTCTGACTTACCTTCAGTCTTCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: LPLSCCCSACCLSWA*HPVPALTYLQSSGS
Trigger: GCTCCCTGAAGACTGAAGGTAAGTCAGAGCAGGAACTGGATGGCAGGCCCAGCTCAGGCAACAGGCTGAGCAGCAGCAGCTCAGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp TCCCTTGAAAGGCGGCTGCCTCTGAGCTGCTGCTGCTCAGCCTGTTaGCTGAGCTGGGCCTGCCATCCAGTTCCTGCTCTGACTTACCTT +
Preference number: 5 (lower is better)
Translates to: SLERRLPLSCCCSAC*LSWACHPVPALTYL
Trigger: AAGGTAAGTCAGAGCAGGAACTGGATGGCAGGCCCAGCTCAGGCAACAGGCTGAGCAGCAGCAGCTCAGAGGCAGCCGCCTTTCAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp TGGAGATCGGAGGGGGTGAGCCCAGAGAGGTGTCATAGTGCTCGCTaGCAGCTGCCTGCTCCAAGGTCAGCACCATTTGGATGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: WRSEGVSPERCHSAR*QLPAPRSAPFGWLP
Trigger: AGGAAGCCATCCAAATGGTGCTGACCTTGGAGCAGGCAGCTGGCAGCGAGCACTATGACACCTCTCTGGGCTCACCCCCTCCGATCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CCA 90 bp TTGCCCTCCACGAAGCCACATGAGTTCAGACTCTCCCGGCTGCTCTaGAGACTGGGGCTCTGTGTGAGCTGGGAGGTACTGTGCTGGCTA +
Preference number: 5 (lower is better)
Translates to: LPSTKPHEFRLSRLL*RLGLCVSWEVLCWL
Trigger: TAGCCAGCACAGTACCTCCCAGCTCACACAGAGCCCCAGTCTCCAGAGCAGCCGGGAGAGTCTGAACTCATGTGGCTTCGTGGAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp CTGAGGTCTTGGACAGACTGGCAATGCCTAGCCTCGGGGAGCCCATaGGTCTGGGCTTGCCCTCCACGAAGCCACATGAGTTCAGACTCT +
Preference number: 5 (lower is better)
Translates to: LRSWTDWQCLASGSP*VWACPPRSHMSSDS
Trigger: AGAGTCTGAACTCATGTGGCTTCGTGGAGGGCAAGCCCAGACCCATGGGCTCCCCGAGGCTAGGCATTGCCAGTCTGTCCAAGACCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GAGAGGGAGAACTGGGAGGTTTGTACTCTGAGGTCTTGGACAGACTaGCAATGCCTAGCCTCGGGGAGCCCATGGGTCTGGGCTTGCCCT +
Preference number: 5 (lower is better)
Translates to: ERENWEVCTLRSWTD*QCLASGSPWVWACP
Trigger: AGGGCAAGCCCAGACCCATGGGCTCCCCGAGGCTAGGCATTGCCAGTCTGTCCAAGACCTCAGAGTACAAACCTCCCAGTTCTCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp AGGCGGCTGCCTCTGAGCTGCTGCTGCTCAGCCTGTTGCCTGAGCTaGGCCTGCCATCCAGTTCCTGCTCTGACTTACCTTCAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: RRLPLSCCCSACCLS*ACHPVPALTYLQSS
Trigger: TGAAGACTGAAGGTAAGTCAGAGCAGGAACTGGATGGCAGGCCCAGCTCAGGCAACAGGCTGAGCAGCAGCAGCTCAGAGGCAGCCGCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp AGTCTTGCCGTTGGACTCATCAGGGAAGCAAGCCAAGAAGGTAGCTaGCTGGTTCAGGGGGCTGCTGGTGTTGCTGCTGCCACCACCGTG +
Preference number: 5 (lower is better)
Translates to: SLAVGLIREASQEGS*LVQGAAGVAAATTV
Trigger: CACGGTGGTGGCAGCAGCAACACCAGCAGCCCCCTGAACCAGCCAGCTACCTTCTTGGCTTGCTTCCCTGATGAGTCCAACGGCAAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp TTTCCATTGCTGGGACTGGTGGCCATCTGGAGGCTGACCTTGGCCTaGTGGGTTGGGGAGCCACTCTTCTTTTCCGCTCCGTTGCTGACC +
Preference number: 5 (lower is better)
Translates to: FPLLGLVAIWRLTLA*WVGEPLFFSAPLLT
Trigger: GGTCAGCAACGGAGCGGAAAAGAAGAGTGGCTCCCCAACCCACCAGGCCAAGGTCAGCCTCCAGATGGCCACCAGTCCCAGCAATGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp ACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCTCACCGCTGGGCGGTAGGTaGGAGCTCTGGCCCACAGAC +
Preference number: 5 (lower is better)
Translates to: TSPFAPRSLQTCYQPSSSPLGGR*ELWPTD
Trigger: GTCTGTGGGCCAGAGCTCCAACCTACCGCCCAGCGG...TGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 90 bp GGGCTGGCACAATGGGCACAAAGTCTGGGGGCCCCTCATTGTCAGTaGGTTCCTTGTCAGACAGGGCTGTGCCATTGGGCCCGATGTAGA +
Preference number: 5 (lower is better)
Translates to: GLAQWAQSLGAPHCQ*VPCQTGLCHWARCR
Trigger: TCTACATCGGGCCCAATGGCACAGCCCTGTCTGACAAGGAACTCACTGACAATGAGGGGCCCCCAGACTTTGTGCCCATTGTGCCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 90 bp CTCCTCGTAAGCCTTGCGGTACCAGCTCTCAGGAGAGCAGGGCGCTaGGGGCTTGGTGGGCGAGCACATTTCGTTCACCCCGTATTTCTT +
Preference number: 5 (lower is better)
Translates to: LLVSLAVPALRRAGR*GLGGRAHFVHPVFL
Trigger: AAGAAATACGGGGTGAACGAAATGTGCTCGCCCACCAAGCCCTCAGCGCCCTGCTCTCCTGAGAGCTGGTACCGCAAGGCTTACGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS GCA 90 bp GGGCAGGGGACCGATTCCGCTGTGCCTTGGAGGCTGGAAGCTCTGTaGCTTCCCTCTCGGTCAATTGGCCATTGTCTGAGCCGTTATCTT +
Preference number: 5 (lower is better)
Translates to: GQGTDSAVPWRLEAL*LPSRSIGHCLSRYL
Trigger: AAGATAACGGCTCAGACAATGGCCAATTGACCGAGAGGGAAGGCACAGAGCTTCCAGCCTCCAAGGCACAGCGGAATCGGTCCCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp GTGGTGGGGCAGAGGAGGGCAGGACCCCCTTCTGGGTGTAGACTTTaGACCTCTGAGAGGGAGAACTGGGAGGTTTGTACTCTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: VVGQRRAGPPSGCRL*TSERENWEVCTLRS
Trigger: AGACCTCAGAGTACAAACCTCCCAGTTCTCCCTCTCAGAGGTGCAAAGTCTACACCCAGAAGGGGGTCCTGCCCTCCTCTGCCCCACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp TGCCGTGTTCTGGATGCTGCTGACAAACTCCGAGGCTGGGGGTTCTaGCATGGCTTCCCCATGCCCAAAGCACGTCTGGGCTATGAAGCT +
Preference number: 5 (lower is better)
Translates to: CRVLDAADKLRGWGF*HGFPMPKARLGYEA
Trigger: AGCTTCATAGCCCAGACGTGCTTTGGGCATGGGGAAGCCATGGCAGAACCCCCAGCCTCGGAGTTTGTCAGCAGCATCCAGAACACGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp CATCTCTCTCCTTGTACTGGGTTCCTTGCTTTCCTGGGCCTGGGATaGTTTGGGGCTCACCTTTGGGGTGGCAGTGGAGGACTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: HLSPCTGFLAFLGLG*FGAHLWGGSGGLRL
Trigger: GAGCCTGAGTCCTCCACTGCCACCCCAAAGGTGAGCCCCAAAGCATCCCAGGCCCAGGAAAGCAAGGAACCCAGTACAAGGAGAGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp TGCACCTCTGAGAGGGAGAACTGGGAGGTTTGTACTCTGAGGTCTTaGACAGACTGGCAATGCCTAGCCTCGGGGAGCCCATGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: CTSERENWEVCTLRS*TDWQCLASGSPWVW
Trigger: CCAGACCCATGGGCTCCCCGAGGCTAGGCATTGCCAGTCTGTCCAAGACCTCAGAGTACAAACCTCCCAGTTCTCCCTCTCAGAGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GTGGTGCTCAGAATCTCCTTCTTAGAGTCCGCTGGAGGGCCTTCCTaGTCCTCACCGTCAACTAGAGTTCCGGGAAACCCTTCGCTCCCG +
Preference number: 5 (lower is better)
Translates to: VVLRISFLESAGGPS*SSPSTRVPGNPSLP
Trigger: CGGGAGCGAAGGGTTTCCCGGAACTCTAGTTGACGGTGAGGACCAGGAAGGCCCTCCAGCGGACTCTAAGAAGGAGATTCTGAGCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GGGAGGCTGCTTGACTTTAGGTTTCGGTTGACATGGAGGGGACTTTaGGCCACCAAGCCAGGCAGGGCCATCTCACAGCCATCCACGACT +
Preference number: 5 (lower is better)
Translates to: GRLLDFRFRLTWRGL*ATKPGRAISQPSTT
Trigger: AGTCGTGGATGGCTGTGAGATGGCCCTGCCTGGCTTGGTGGCCCAAAGTCCCCTCCATGTCAACCGAAACCTAAAGTCAAGCAGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GAGGCAGAGGCGGGGTCCCTTTGGGCCTTGCCAGGACGCAATGCTTaGGTGAAGCAACTTTCCTCTCTAGGGTTGTCTTCGAGGATGGGA +
Preference number: 5 (lower is better)
Translates to: EAEAGSLWALPGRNA*VKQLSSLGLSSRMG
Trigger: TCCCATCCTCGAAGACAACCCTAGAGAGGAAAGTTGCTTCACCCAAGCATTGCGTCCTGGCAAGGCCCAAAGGGACCCCGCCTCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGTGGGCCTGGGATGCTTaGGGGCTCACCTTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: VLHGNPMSPSPFPQPQGKWAWDA*GLTFGV
Trigger: CACCCCAAAGGTGAGCCCCAAAGCATCCCAGGCCCA...CTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCATGGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 90 bp TGGGAGCGGCTTTGTTGCCAGACTCTTCCCCCATCTCAGATAAGATaGGCAGGTTGTCAGGGCCCACCTCGGGCTTCTCTCTGCACACCA +
Preference number: 5 (lower is better)
Translates to: WERLCCQTLPPSQIR*AGCQGPPRASLCTP
Trigger: TGGTGTGCAGAGAGAAGCCCGAGGTGGGCCCTGACAACCTGCTCATCTTATCTGAGATGGGGGAAGAGTCTGGCAACAAAGCCGCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 90 bp GCCATCTCACAGCCATCCACGACTCTCCTAACGTTATCAGTCCCTTaGAAGGCGGCTGCCTCTGAGCTGCTGCTGCTCAGCCTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: AISQPSTTLLTLSVP*KAAASELLLLSLLP
Trigger: AGGCAACAGGCTGAGCAGCAGCAGCTCAGAGGCAGCCGCCTTTCAAGGGACTGATAACGTTAGGAGAGTCGTGGATGGCTGTGAGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp GCATATGGGAGTTGCGGTGGTCATCCTCGTCACAATCCTGTTGGTTaGTTCGCCTCGAGGCAATGGCGGCGTCCAGGAAGAAGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: AYGSCGGHPRHNPVG*FASRQWRRPGRRQL
Trigger: AAGCTGCCTTCTTCCTGGACGCCGCCATTGCCTCGAGGCGAAGCAACCAACAGGATTGTGACGAGGATGACCACCGCAACTCCCATATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp ACAGGAGGCAGAGGCGGGGTCCCTTTGGGCCTTGCCAGGACGCAATaGTTGGGTGAAGCAACTTTCCTCTCTAGGGTTGTCTTCGAGGAT +
Preference number: 5 (lower is better)
Translates to: TGGRGGVPLGLARTQ*LGEATFLSRVVFED
Trigger: ATCCTCGAAGACAACCCTAGAGAGGAAAGTTGCTTCACCCAAGCATTGCGTCCTGGCAAGGCCCAAAGGGACCCCGCCTCTGCCTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGCGATTCCGCTGTGCCTaGGAGGCTGGAAGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: VLHGNPMSPSPFPQPQGKRFRCA*EAGSSV
Trigger: CACAGAGCTTCCAGCCTCCAAGGCACAGCGGAATCG...CTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCATGGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTGCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTCCCATGGGTCTGGGCTaGCCCTCCACGAAGCCACAT +
Preference number: 5 (lower is better)
Translates to: VLSQSHGASHHFLLPHVGPMGLG*PSTKPH
Trigger: ATGTGGCTTCGTGGAGGGCAAGCCCAGACCCATGGG...ACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTGGAGCAGGCAGTGGCCATGGACCAGAATCAGGTGGCCAGGAGAGACAGCAAGTTGAGGATGTTTCCATaGCTGGGACTGGTGGCCATC +
Preference number: 5 (lower is better)
Translates to: VEQAVAMDQNQVARRDSKLRMFP*LGLVAI
Trigger: GATGGCCACCAGTCCCAGCAATGGAAACATCCTCAA...CTTGCTGTCTCTCCTGGCCACCTGATTCTGGTCCATGGCCACTGCCTGCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS TCA 90 bp CAGGCTGGCTGTGTTGGAGATGGTGACCATGGCCTTGCCCACCGTTaGGATTTTGCAGCCTTTGATGGGAGCGGCTTTGTTGCCAGACTC +
Preference number: 5 (lower is better)
Translates to: QAGCVGDGDHGLAHR*DFAAFDGSGFVARL
Trigger: GAGTCTGGCAACAAAGCCGCTCCCATCAAAGGCTGCAAAATCTCAACGGTGGGCAAGGCCATGGTCACCATCTCCAACACAGCCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp TCTGTCACACCCTCCAGTGCCTCCAGGTACTCCAGGGAATCCAGCTaGAGGACCTGCTCCAAGTCAAATTCACGAAGCCACTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: SVTPSSASRYSRESS*RTCSKSNSRSHLLG
Trigger: CCCCAACAAGTGGCTTCGTGAATTTGACTTGGAGCAGGTCCTGCAGCTGGATTCCCTGGAGTACCTGGAGGCACTGGAGGGTGTGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp AAGAGCATATGGGAGTTGCGGTGGTCATCCTCGTCACAATCCTGTTaGTTGCTTCGCCTCGAGGCAATGGCGGCGTCCAGGAAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: KSIWELRWSSSSQSC*LLRLEAMAASRKKA
Trigger: TGCCTTCTTCCTGGACGCCGCCATTGCCTCGAGGCGAAGCAACCAACAGGATTGTGACGAGGATGACCACCGCAACTCCCATATGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp TCTTCTTCTTCTTCATCCTTAAGACTCTCGACGCGATCTGGATGGTaGACAGGGTCTCCGCGTAGCTGCTGGCTGCGGCCGAGATGTGTG +
Preference number: 5 (lower is better)
Translates to: SSSSSSLRLSTRSGW*TGSPRSCWLRPRCV
Trigger: CACACATCTCGGCCGCAGCCAGCAGCTACGCGGAGACCCTGTCCACCATCCAGATCGCGTCGAGAGTCTTAAGGATGAAGAAGAAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp TGGTCTTCTTCTTCTTCATCCTTAAGACTCTCGACGCGATCTGGATaGTGGACAGGGTCTCCGCGTAGCTGCTGGCTGCGGCCGAGATGT +
Preference number: 5 (lower is better)
Translates to: WSSSSSSLRLSTRSG*WTGSPRSCWLRPRC
Trigger: ACATCTCGGCCGCAGCCAGCAGCTACGCGGAGACCCTGTCCACCATCCAGATCGCGTCGAGAGTCTTAAGGATGAAGAAGAAGAAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GGCTTAAAGGAGCACATCTGCCAGCTTGCTCCGGCCCGAACTGGATaGGCAGCTCTTCGAAGGGAAACTTACTGGGTTCTTCGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: GLKEHICQLAPARTG*AALRRETYWVLRCH
Trigger: ATGGCAGCGAAGAACCCAGTAAGTTTCCCTTCGAAGAGCTGCCCATCCAGTTCGGGCCGGAGCAAGCTGGCAGATGTGCTCCTTTAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GCTTGGCTTAAAGGAGCACATCTGCCAGCTTGCTCCGGCCCGAACTaGATGGGCAGCTCTTCGAAGGGAAACTTACTGGGTTCTTCGCTG +
Preference number: 5 (lower is better)
Translates to: AWLKGAHLPACSGPN*MGSSSKGNLLGSSL
Trigger: CAGCGAAGAACCCAGTAAGTTTCCCTTCGAAGAGCTGCCCATCCAGTTCGGGCCGGAGCAAGCTGGCAGATGTGCTCCTTTAAGCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTGCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTCGATTCCGCTGTGCCTaGGAGGCTGGAAGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: VLSQSHGASHHFLLPHVGRFRCA*EAGSSV
Trigger: CACAGAGCTTCCAGCCTCCAAGGCACAGCGGAATCG...ACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCGTTGCACAGTCACCATaGTGGTGCTCAGAATCTCCT +
Preference number: 5 (lower is better)
Translates to: LILLSWVLPAQRAWEGGVVAQSP*WCSESP
Trigger: AGGAGATTCTGAGCACCACAATGGTGACTGTGCAAC...GACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGGCAGCACTGAAGCCATaGCTGTCTGCCAGGCAATGG +
Preference number: 5 (lower is better)
Translates to: VLHGNPMSPSPFPQPQGKAALKP*LSARQW
Trigger: CCATTGCCTGGCAGACAGCAATGGCTTCAGTGCTGC...CTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCATGGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CATGCCAACTTGAAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTGCCTGCTGAGTTAGACTGGCTGGCCTaGGGAGAGGCCCCTGTGGAC +
Preference number: 5 (lower is better)
Translates to: HANLKGRALSQSLWLPAELDWLA*GEAPVD
Trigger: GTCCACAGGGGCCTCTCCCAAGGCCAGCCAGTCTAA...CTCAGCAGGCAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCGCTGGGCGGTAGGTaGGAGCTCTGGCCCACAGAC +
Preference number: 5 (lower is better)
Translates to: SSCWCFVLHGNPMSPSPFPLGGR*ELWPTD
Trigger: GTCTGTGGGCCAGAGCTCCAACCTACCGCCCAGCGG...GAAAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp TATCGGCGCCTGGAGGTGATGTCAAAGCAGGTGATCATCATGAGATaGGCCTTGCAGAAGTTGACGCGGCTCTCCAAGCGCTCTGTCACA +
Preference number: 5 (lower is better)
Translates to: YRRLEVMSKQVIIMR*ALQKLTRLSKRSVT
Trigger: TGTGACAGAGCGCTTGGAGAGCCGCGTCAACTTCTGCAAGGCCCATCTCATGATGATCACCTGCTTTGACATCACCTCCAGGCGCCGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTGATAAGATGAGCAGGTaGTCAGGGCCCACCTCGGGC +
Preference number: 5 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSDKMSR*SGPTSG
Trigger: GCCCGAGGTGGGCCCTGACAACCTGCTCATCTTATC...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GGACCCCCTTCTGGGTGTAGACTTTGCACCTCTGAGAGGGAGAACTaGGAGGTTTGTACTCTGAGGTCTTGGACAGACTGGCAATGCCTA +
Preference number: 5 (lower is better)
Translates to: GPPSGCRLCTSEREN*EVCTLRSWTDWQCL
Trigger: TAGGCATTGCCAGTCTGTCCAAGACCTCAGAGTACAAACCTCCCAGTTCTCCCTCTCAGAGGTGCAAAGTCTACACCCAGAAGGGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp AATTTCATCTCTCTCCTTGTACTGGGTTCCTTGCTTTCCTGGGCCTaGGATGCTTTGGGGCTCACCTTTGGGGTGGCAGTGGAGGACTCA +
Preference number: 5 (lower is better)
Translates to: NFISLLVLGSLLSWA*DALGLTFGVAVEDS
Trigger: TGAGTCCTCCACTGCCACCCCAAAGGTGAGCCCCAAAGCATCCCAGGCCCAGGAAAGCAAGGAACCCAGTACAAGGAGAGAGATGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp TCCTCAAATTTCATCTCTCTCCTTGTACTGGGTTCCTTGCTTTCCTaGGCCTGGGATGCTTTGGGGCTCACCTTTGGGGTGGCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: SSNFISLLVLGSLLS*AWDALGLTFGVAVE
Trigger: CTCCACTGCCACCCCAAAGGTGAGCCCCAAAGCATCCCAGGCCCAGGAAAGCAAGGAACCCAGTACAAGGAGAGAGATGAAATTTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp CCAGCTGCAGGACCTGCTCCAAGTCAAATTCACGAAGCCACTTGTTaGGGTCCAGCATCAGGTACTGCTTGGTCGCTTCTAGCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: PAAGPAPSQIHEATC*GPASGTAWSLLAPS
Trigger: TGAAGGAGCTAGAAGCGACCAAGCAGTACCTGATGCTGGACCCCAACAAGTGGCTTCGTGAATTTGACTTGGAGCAGGTCCTGCAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTATGTGCTTGCTCCCGTaGACCAAAGCCAGGATGACG +
Preference number: 5 (lower is better)
Translates to: AFSVPRGFPSFPPSTCWCMCLLP*TKARMT
Trigger: CGTCATCCTGGCTTTGGTCAACGGGAGCAAGCACAT...ACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCATCCAGGCCCAGCTTaGGGAGAGGCAGGAACTGCG +
Preference number: 5 (lower is better)
Translates to: SSCWCFVLHGNPMSPSPFHPGPA*GEAGTA
Trigger: CGCAGTTCCTGCCTCTCCCAAAGCTGGGCCTGGATG...GAAAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CATGCCAACTTGAAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTGCCTGCTGAGGCCAGCTGTTCCAGCTaGGCGCTGAAGAGCTTACTG +
Preference number: 5 (lower is better)
Translates to: HANLKGRALSQSLWLPAEASCSS*ALKSLL
Trigger: CAGTAAGCTCTTCAGCGCCAAGCTGGAACAGCTGGC...CTCAGCAGGCAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGGTCCTGCCAAGAGAGTaGCTTCTGCTGGCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLVLPRE*LLLASC
Trigger: ACAGCTGGCCAGCAGAAGCAACTCTCTTGGCAGGAC...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CTCATCCTGTTGTCTTGGGTGTTGCCAGCACAGAGGGCTTGGGAGGGCGGTGTCTCTAGGATTTTCAGCTaGGCATTGAAGCACATGACC +
Preference number: 5 (lower is better)
Translates to: LILLSWVLPAQRAWEGGVSRIFS*ALKHMT
Trigger: GGTCATGTGCTTCAATGCCAAGCTGAAAATCCTAGA...GACACCGCCCTCCCAAGCCCTCTGTGCTGGCAACACCCAAGACAACAGGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 90 bp TCATTCCACGACTTCCTGATAGTATTGGGAACCTGGAGTTTGTCGTaGATCACAGCAGAGAAAGCAGGGTCCTTTCCCGGGAGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: SFHDFLIVLGTWSLS*ITAEKAGSFPGRGP
Trigger: GGGACCCCTCCCGGGAAAGGACCCTGCTTTCTCTGCTGTGATTCACGACAAACTCCAGGTTCCCAATACTATCAGGAAGTCGTGGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CCA 90 bp CAAATTCACGAAGCCACTTGTTGGGGTCCAGCATCAGGTACTGCTTaGTCGCTTCTAGCTCCTTCATCAGCCACTCGTACTTGGCTCGGA +
Preference number: 5 (lower is better)
Translates to: QIHEATCWGPASGTA*SLLAPSSATRTWLG
Trigger: TCCGAGCCAAGTACGAGTGGCTGATGAAGGAGCTAGAAGCGACCAAGCAGTACCTGATGCTGGACCCCAACAAGTGGCTTCGTGAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp GTCGAAGGCCGGTGTTTCTTCTTCTTAGATGACAGATTTAACTTCTaGGCAGCTCGTGCGAAGAAGGAAGCGGCCACTGAGGTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: VEGRCFFFLDDRFNF*AARAKKEAATEVPV
Trigger: CACAGGGACCTCAGTGGCCGCTTCCTTCTTCGCACGAGCTGCCCAGAAGTTAAATCTGTCATCTAAGAAGAAGAAACACCGGCCTTCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTTTTCTGGAAGGCATTTaGACCTCCGCAAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: AFSVPRGFPSFPPSTCWCFLEGI*TSASQG
Trigger: CCCCTGACTTGCGGAGGTCAAAATGCCTTCCAGAAA...ACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp ACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCTCACTCCCCCAGAGGAGCTaGATGTGTACTTGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: TSPFAPRSLQTCYQPSSSLPQRS*MCTWSS
Trigger: AGAAGACCAAGTACACATCAAGCTCCTCTGGGGGAG...TGAGGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp ATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGTCTCTCTCCCCCAGAGGAGCTaGATGTGTACTTGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: MVIPCHPPLSHSRKVRVSLPQRS*MCTWSS
Trigger: AGAAGACCAAGTACACATCAAGCTCCTCTGGGGGAG...AGAGACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGGTTGCACAGTCACCATaGTGGTGCTCAGAATCTCCT +
Preference number: 5 (lower is better)
Translates to: VLHGNPMSPSPFPQPQGKVAQSP*WCSESP
Trigger: AGGAGATTCTGAGCACCACAATGGTGACTGTGCAAC...CTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCATGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTGTCCTGCCAAGAGAGTaGCTTCTGCTGGCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLVLPRE*LLLASC
Trigger: ACAGCTGGCCAGCAGAAGCAACTCTCTTGGCAGGAC...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTGCTTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTATCAGCCACTCGTACTaGGCTCGGACTTCAGCGATT +
Preference number: 5 (lower is better)
Translates to: VLSQSHGASHHFLLPHVGISHSY*ARTSAI
Trigger: AATCGCTGAAGTCCGAGCCAAGTACGAGTGGCTGAT...ACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TTTCTCAGTCCCACGGGGCTTCCCATCATTTCCTCCTTCCACATGTTGGTGTCTTCACGAAGCCACTTGTaGGGGTCCAGCATCAGGTAC +
Preference number: 5 (lower is better)
Translates to: FLSPTGLPIISSFHMLVSSRSHL*GSSIRY
Trigger: GTACCTGATGCTGGACCCCAACAAGTGGCTTCGTGA...AGACACCAACATGTGGAAGGAGGAAATGATGGGAAGCCCCGTGGGACTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CCCATCATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCATGGGCCTTGCAGAAGTaGACGCGGCTCTCCAAGCGC +
Preference number: 5 (lower is better)
Translates to: PIISSFHMLVSVPFFPMAWALQK*TRLSKR
Trigger: GCGCTTGGAGAGCCGCGTCAACTTCTGCAAGGCCCA...TGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGATCATGAGATGGGCCTaGCAGAAGTTGACGCGGCTC +
Preference number: 5 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLIMRWA*QKLTRL
Trigger: GAGCCGCGTCAACTTCTGCAAGGCCCATCTCATGAT...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGAGCATGACTTTCACCTaGCCCATGCCAGGAGTGTCC +
Preference number: 5 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLSMTFT*PMPGVS
Trigger: GGACACTCCTGGCATGGGCAAGGTGAAAGTCATGCT...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CCA 90 bp GGTACTGCTTGGTCGCTTCTAGCTCCTTCATCAGCCACTCGTACTTaGCTCGGACTTCAGCGATTCTCTGCTGCCGATGTTCTAGGATTT +
Preference number: 5 (lower is better)
Translates to: GTAWSLLAPSSATRT*LGLQRFSAADVLGF
Trigger: AAATCCTAGAACATCGGCAGCAGAGAATCGCTGAAGTCCGAGCCAAGTACGAGTGGCTGATGAAGGAGCTAGAAGCGACCAAGCAGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp TCAGCACCATTTGGATGGCTTCCTGCTTTAGCTGGTTCAGGTGTGTaGCACAAATGTCACAGCGGTTGTCTCGGTCATTCCACGACTTCC +
Preference number: 5 (lower is better)
Translates to: SAPFGWLPALAGSGV*HKCHSGCLGHSTTS
Trigger: GGAAGTCGTGGAATGACCGAGACAACCGCTGTGACATTTGTGCCACACACCTGAACCAGCTAAAGCAGGAAGCCATCCAAATGGTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCACAGCCGCAAGGTAAGAGCCTGAGAAGCATCTaGTGGGAAAACAGCATCGAA +
Preference number: 5 (lower is better)
Translates to: VLHGNPMSPSPFPQPQGKSLRSI*WENSIE
Trigger: TTCGATGCTGTTTTCCCACAAGATGCTTCTCAGGCT...CTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCATGGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CTGATATCCCACCCCTGGCTGTATCCATCACCCTTCCCTGGCCCATGTCTCTGCGAGCTTGATGTGTACTaGGTCTTCTTCTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: LISHPWLYPSPFPGPCLCELDVY*VFFFFI
Trigger: GATGAAGAAGAAGAAGACCAAGTACACATCAAGCTC...GCAGAGACATGGGCCAGGGAAGGGTGATGGATACAGCCAGGGGTGGGATATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGGAACATCCAGGCCCAGCTTaGGGAGAGGCAGGAACTGCG +
Preference number: 5 (lower is better)
Translates to: PPSTCWCLYLSFLWQTKEHPGPA*GEAGTA
Trigger: CGCAGTTCCTGCCTCTCCCAAAGCTGGGCCTGGATG...TTCCTTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGATGGTGACCATGGCCTaGCCCACCGTTGAGATTTTG +
Preference number: 5 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLMVTMA*PTVEIL
Trigger: CAAAATCTCAACGGTGGGCAAGGCCATGGTCACCAT...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GAGGCCTGTAGACAATGCCTGACCATTCCATGCTTCAGTCCTATCTCCCTAACACTGGCCAGCAGGAGCTaGCTCACTGCAGAGATCTTA +
Preference number: 5 (lower is better)
Translates to: EACRQCLTIPCFSPISLTLASRS*LTAEIL
Trigger: TAAGATCTCTGCAGTGAGCAAGCTCCTGCTGGCCAG...TGTTAGGGAGATAGGACTGAAGCATGGAATGGTCAGGCATTGTCTACAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTTCTTTTCCGCTCCGTaGCTGACCCCAAGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLFFSAP*LTPRLL
Trigger: CAACAGCCTTGGGGTCAGCAACGGAGCGGAAAAGAA...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTGGAGTGTCCTTCACCTaGTTGACAGCCCTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLGVSFT*LTALRR
Trigger: TCTCCTGAGGGCTGTCAACAAGGTGAAGGACACTCC...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS GCA 90 bp AAGTCAAATTCACGAAGCCACTTGTTGGGGTCCAGCATCAGGTACTaGTTGGTCGCTTCTAGCTCCTTCATCAGCCACTCGTACTTGGCT +
Preference number: 5 (lower is better)
Translates to: KSNSRSHLLGSSIRY*LVASSSFISHSYLA
Trigger: AGCCAAGTACGAGTGGCTGATGAAGGAGCTAGAAGCGACCAAGCAGTACCTGATGCTGGACCCCAACAAGTGGCTTCGTGAATTTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GAGGCCTGTAGACAATGCCTGACCATTCCATGCTTCAGTCCTATCTCCCTAACATTTCTGGAAGGCATTTaGACCTCCGCAAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: EACRQCLTIPCFSPISLTFLEGI*TSASQG
Trigger: CCCCTGACTTGCGGAGGTCAAAATGCCTTCCAGAAA...TGTTAGGGAGATAGGACTGAAGCATGGAATGGTCAGGCATTGTCTACAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CATGCCAACTTGAAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTGCCTGCTGAGCCTCCTTCTCGGTTTTaGCTGAGAGCTTTCACACAG +
Preference number: 5 (lower is better)
Translates to: HANLKGRALSQSLWLPAEPPSRF*LRAFTQ
Trigger: CTGTGTGAAAGCTCTCAGCAAAAACCGAGAAGGAGG...CTCAGCAGGCAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCAGCTCAGCAAACGTATaGCACTTCAGACAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: ETSPFAPRSLQTCYQPSSSSANV*HFRQSL
Trigger: AAGGGACTGTCTGAAGTGCAATACGTTTGCTGAGCT...GGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp AGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGCCAGCTCCAGGGGCTGTaGCACAGTCACCATTGTGGT +
Preference number: 5 (lower is better)
Translates to: SLFASGPMYRVLQGSSKCQLQGL*HSHHCG
Trigger: ACCACAATGGTGACTGTGCAACAGCCCCTGGAGCTG...GCACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CCTATGGCAAACAAAGGAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGACGGAGCAGTCACTGTaGAAGCTGATGATGCTGGTA +
Preference number: 5 (lower is better)
Translates to: PMANKGNIAFRSTLTPDLTEQSL*KLMMLV
Trigger: TACCAGCATCATCAGCTTCAACAGTGACTGCTCCGT...CAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCCATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGATAAGATGAGCAGGTaGTCAGGGCCCACCTCGGGC +
Preference number: 5 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSDKMSR*SGPTSG
Trigger: GCCCGAGGTGGGCCCTGACAACCTGCTCATCTTATC...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GCCAACTTGAAAGGAAGAGCTTTGTCTCAGTCCCTTTGGCTGCCTGCTGAGATTCAAATGTCACAGCGGTaGTCTCGGTCATTCCACGAC +
Preference number: 5 (lower is better)
Translates to: ANLKGRALSQSLWLPAEIQMSQR*SRSFHD
Trigger: GTCGTGGAATGACCGAGACAACCGCTGTGACATTTG...AATCTCAGCAGGCAGCCAAAGGGACTGAGACAAAGCTCTTCCTTTCAAGTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS GCA 90 bp TTCATCAGCCACTCGTACTTGGCTCGGACTTCAGCGATTCTCTGCTaGCGATGTTCTAGGATTTTCAGCTTGGCATTGAAGCACATGACC +
Preference number: 5 (lower is better)
Translates to: FISHSYLARTSAILC*RCSRIFSLALKHMT
Trigger: GGTCATGTGCTTCAATGCCAAGCTGAAAATCCTAGAACATCGGCAGCAGAGAATCGCTGAAGTCCGAGCCAAGTACGAGTGGCTGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp TCCTTCATCAGCCACTCGTACTTGGCTCGGACTTCAGCGATTCTCTaGTGCCGATGTTCTAGGATTTTCAGCTTGGCATTGAAGCACATG +
Preference number: 5 (lower is better)
Translates to: SFISHSYLARTSAIL*CRCSRIFSLALKHM
Trigger: CATGTGCTTCAATGCCAAGCTGAAAATCCTAGAACATCGGCAGCAGAGAATCGCTGAAGTCCGAGCCAAGTACGAGTGGCTGATGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GGTCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTAGAAGCATGGTGAGCTaGCTCTCCTTGTATGGGATG +
Preference number: 5 (lower is better)
Translates to: GHLVGVSFSMVIPCHPPLRSMVS*LSLYGM
Trigger: CATCCCATACAAGGAGAGCAAGCTCACCATGCTTCT...AAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAACCATGCCAGAGTCCTaGCTCAGGGAAGGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: HFLLPHVGVCTFLSYGKQTMPES*LREGGG
Trigger: CCCACCACCTTCCCTGAGCAAGGACTCTGGCATGGT...TTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAATTAGACTGGCTGGCCTaGGGAGAGGCCCCTGTGGAC +
Preference number: 5 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKLDWLA*GEAPVD
Trigger: GTCCACAGGGGCCTCTCCCAAGGCCAGCCAGTCTAA...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp AGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGCCTGGCCAGCAGGAGCTaGCTCACTGCAGAGATCTTA +
Preference number: 5 (lower is better)
Translates to: SLFASGPMYRVLQGSSKCLASRS*LTAEIL
Trigger: TAAGATCTCTGCAGTGAGCAAGCTCCTGCTGGCCAG...GCACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp AGTTGGCCTCTTGCTACTGGACAGGACACTGGATGGCAGAAAACGATGCAACCCATTTTCAGCTTGGCATaGAAGCACATGACCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SWPLATGQDTGWQKTMQPIFSLA*KHMTSL
Trigger: CAAGGAGGTCATGTGCTTCAATGCCAAGCTGAAAAT...GGGTTGCATCGTTTTCTGCCATCCAGTGTCCTGTCCAGTAGCAAGAGGCCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CCCATCATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCATCACGAAGCCACTTGTaGGGGTCCAGCATCAGGTAC +
Preference number: 5 (lower is better)
Translates to: PIISSFHMLVSVPFFPMASRSHL*GSSIRY
Trigger: GTACCTGATGCTGGACCCCAACAAGTGGCTTCGTGA...TGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 90 bp ACTGGATGGGCAGCTCTTCGAAGGGAAACTTACTGGGTTCTTCGCTaGCATCTATGCAATCTAGTCTTTCCTGCAGCTCAGCAAACGTAT +
Preference number: 5 (lower is better)
Translates to: TGWAALRRETYWVLR*HLCNLVFPAAQQTY
Trigger: ATACGTTTGCTGAGCTGCAGGAAAGACTAGATTGCATAGATGGCAGCGAAGAACCCAGTAAGTTTCCCTTCGAAGAGCTGCCCATCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GAAACATCGCCTTTCGCTCCACGCTCACTCCAGACTTGCTACCAACCTTCATCCCGCTCATTGATAAGCTaGAACAGCCAAGAAATAGCA +
Preference number: 5 (lower is better)
Translates to: ETSPFAPRSLQTCYQPSSRSLIS*NSQEIA
Trigger: TGCTATTTCTTGGCTGTTCAAGCTTATCAATGAGCG...GGATGAAGGTTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCCCTCCTTCTCGGTTTTaGCTGAGAGCTTTCACACAG +
Preference number: 5 (lower is better)
Translates to: SSCWCFVLHGNPMSPSPFPPSRF*LRAFTQ
Trigger: CTGTGTGAAAGCTCTCAGCAAAAACCGAGAAGGAGG...GAAAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp ATGAAGGCTTACGGACTTGTGAAGTTGCCGATTCTGTTACAAGTCAATGCACTCTCTGGGGGCCCCTCATaGTCAGTGAGTTCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: MKAYGLVKLPILLQVNALSGGPS*SVSSLS
Trigger: TGACAAGGAACTCACTGACAATGAGGGGCCCCCAGA...GAGTGCATTGACTTGTAACAGAATCGGCAACTTCACAAGTCCGTAAGCCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp ATCCATGCCCACAGGGCAGATGCTTTTCTTGCTCAAAGTTTGGATGGAACTCCCAGCTCAGCAAACGTATaGCACTTCAGACAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: IHAHRADAFLAQSLDGTPSSANV*HFRQSL
Trigger: AAGGGACTGTCTGAAGTGCAATACGTTTGCTGAGCT...GGGAGTTCCATCCAAACTTTGAGCAAGAAAAGCATCTGCCCTGTGGGCATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp AGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGCGGAGAACTGGGAGGTTaGTACTCTGAGGTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: SLFASGPMYRVLQGSSKCGELGG*YSEVLD
Trigger: GTCCAAGACCTCAGAGTACAAACCTCCCAGTTCTCC...GCACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAACCATGCCAGAGTCCTaGCTCAGGGAAGGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKTMPES*LREGGG
Trigger: CCCACCACCTTCCCTGAGCAAGGACTCTGGCATGGT...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCACGGAGCAGTCACTGTaGAAGCTGATGATGCTGGTA +
Preference number: 5 (lower is better)
Translates to: SSCWCFVLHGNPMSPSPFTEQSL*KLMMLV
Trigger: TACCAGCATCATCAGCTTCAACAGTGACTGCTCCGT...GAAAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAATGGGAGCGGCTTTGTaGCCAGACTCTTCCCCCATC +
Preference number: 5 (lower is better)
Translates to: HFLLPHVGVCTFLSYGKQMGAAL*PDSSPI
Trigger: GATGGGGGAAGAGTCTGGCAACAAAGCCGCTCCCAT...TTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CCCATCATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAATTCACGAAGCCACTaGTTGGGGTCCAGCATCAGG +
Preference number: 5 (lower is better)
Translates to: PIISSFHMLVSVPFFPMANSRSH*LGSSIR
Trigger: CCTGATGCTGGACCCCAACAAGTGGCTTCGTGAATT...TGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTCCGGAGGTTTCCAGAAGGGTTCAGAGATAAGATAAAAGATTCAGCTCAAAAGCTGACCCCAAGGCTGTaGGGTTTGCCGCTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: VRRFPEGFRDKIKDSAQKLTPRL*GLPLCL
Trigger: CAAACACAGCGGCAAACCCAACAGCCTTGGGGTCAG...CTTTTGAGCTGAATCTTTTATCTTATCTCTGAACCCTTCTGGAAACCTCCGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp AGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGCAGAAGCATGGTGAGCTaGCTCTCCTTGTATGGGATG +
Preference number: 5 (lower is better)
Translates to: SLFASGPMYRVLQGSSKCRSMVS*LSLYGM
Trigger: CATCCCATACAAGGAGAGCAAGCTCACCATGCTTCT...GCACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTATGGTGACCATGGCCTaGCCCACCGTTGAGATTTTG +
Preference number: 5 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSMVTMA*PTVEIL
Trigger: CAAAATCTCAACGGTGGGCAAGGCCATGGTCACCAT...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTGGGCCTGGGATGCTTaGGGGCTCACCTTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: VNIYSAAIPIRRHHYKHNWAWDA*GLTFGV
Trigger: CACCCCAAAGGTGAGCCCCAAAGCATCCCAGGCCCA...GTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTACGGACACAGCAGCACTGAAGCCATaGCTGTCTGCCAGGCAATGG +
Preference number: 5 (lower is better)
Translates to: FVDFFLTSTIWTQESTDTAALKP*LSARQW
Trigger: CCATTGCCTGGCAGACAGCAATGGCTTCAGTGCTGC...TGTGTCCGTACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACGGGTCCCTTTGGGCCTaGCCAGGACGCAATGCTTGG +
Preference number: 5 (lower is better)
Translates to: VNIYSAAIPIRRHHYKHNGSLWA*PGRNAW
Trigger: CCAAGCATTGCGTCCTGGCAAGGCCCAAAGGGACCC...GTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTAGGGGGCTGCTGGTGTaGCTGCTGCCACCACCGTGT +
Preference number: 5 (lower is better)
Translates to: LTFIQLQYRLGDITTNTTRGLLV*LLPPPC
Trigger: ACACGGTGGTGGCAGCAGCAACACCAGCAGCCCCCT...AGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAGCCAGCTGTTCCAGCTaGGCGCTGAAGAGCTTACTG +
Preference number: 5 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKASCSS*ALKSLL
Trigger: CAGTAAGCTCTTCAGCGCCAAGCTGGAACAGCTGGC...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GAAGGCTCTGCTTCTCTAGGAGACACACTTGTTAAAGCTACAAGATACACAGAAATCATGAGATGGGCCTaGCAGAAGTTGACGCGGCTC +
Preference number: 5 (lower is better)
Translates to: EGSASLGDTLVKATRYTEIMRWA*QKLTRL
Trigger: GAGCCGCGTCAACTTCTGCAAGGCCCATCTCATGAT...TTCTGTGTATCTTGTAGCTTTAACAAGTGTGTCTCCTAGAGAAGCAGAGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS GCA 90 bp AACTTACTGGGTTCTTCGCTGCCATCTATGCAATCTAGTCTTTCCTaGAGCTCAGCAAACGTATTGCACTTCAGACAGTCCCTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: NLLGSSLPSMQSSLS*SSANVLHFRQSLSD
Trigger: GTCAGAAAGGGACTGTCTGAAGTGCAATACGTTTGCTGAGCTGCAGGAAAGACTAGATTGCATAGATGGCAGCGAAGAACCCAGTAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp AGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTGCAGCCTGAGAAGCATCTaGTGGGAAAACAGCATCGAA +
Preference number: 5 (lower is better)
Translates to: SLFASGPMYRVLQGSSKCSLRSI*WENSIE
Trigger: TTCGATGCTGTTTTCCCACAAGATGCTTCTCAGGCT...GCACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTACGGACACATCTGGGGGCCCCTCATaGTCAGTGAGTTCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: FVDFFLTSTIWTQESTDTSGGPS*SVSSLS
Trigger: TGACAAGGAACTCACTGACAATGAGGGGCCCCCAGA...TGTGTCCGTACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp AGGCACTTAATCCATCATTCTGGGTCATCTTGTTGGTGTTTCGTTCTCCATGGTGAGATTTTGCAGCCTTaGATGGGAGCGGCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: RHLIHHSGSSCWCFVLHGEILQP*MGAALL
Trigger: CAACAAAGCCGCTCCCATCAAAGGCTGCAAAATCTC...ACCATGGAGAACGAAACACCAACAAGATGACCCAGAATGATGGATTAAGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GAGGCCTGTAGACAATGCCTGACCATTCCATGCTTCAGTCCTATCTCCCTAACAATTGGACCTTTTCTTTaGGTTTTTGAGGCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: EACRQCLTIPCFSPISLTIGPFL*VFEAPA
Trigger: TGCAGGAGCCTCAAAAACCAAAAGAAAAGGTCCAAT...TGTTAGGGAGATAGGACTGAAGCATGGAATGGTCAGGCATTGTCTACAGGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TCATCTTGTTGGTGTTTCGTTCTCCATGGTAATCCCATGTCACCCTCCCCTTTCTCTAGGATTTTCAGCTaGGCATTGAAGCACATGACC +
Preference number: 5 (lower is better)
Translates to: SSCWCFVLHGNPMSPSPFSRIFS*ALKHMT
Trigger: GGTCATGTGCTTCAATGCCAAGCTGAAAATCCTAGA...GAAAGGGGAGGGTGACATGGGATTACCATGGAGAACGAAACACCAACAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTGGGCCTTGCAGAAGTaGACGCGGCTCTCCAAGCGC +
Preference number: 5 (lower is better)
Translates to: LTFIQLQYRLGDITTNTTWALQK*TRLSKR
Trigger: GCGCTTGGAGAGCCGCGTCAACTTCTGCAAGGCCCA...AGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 90 bp CTCTTTGCGCTCATTGATAAGCTTGAACAGCCAAGAAATAGCACATaGAATAATGCCCAGGTTCTGCATAGAGTCGTCCCTTCCGATCAT +
Preference number: 5 (lower is better)
Translates to: LFALIDKLEQPRNST*NNAQVLHRVVPSDH
Trigger: ATGATCGGAAGGGACGACTCTATGCAGAACCTGGGCATTATTCCATGTGCTATTTCTTGGCTGTTCAAGCTTATCAATGAGCGCAAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp CATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAGAGATTTTGCAGCCTTaGATGGGAGCGGCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: HFLLPHVGVCTFLSYGKQEILQP*MGAALL
Trigger: CAACAAAGCCGCTCCCATCAAAGGCTGCAAAATCTC...TTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTACGGACACAATCAGCCACTCGTACTaGGCTCGGACTTCAGCGATT +
Preference number: 5 (lower is better)
Translates to: FVDFFLTSTIWTQESTDTISHSY*ARTSAI
Trigger: AATCGCTGAAGTCCGAGCCAAGTACGAGTGGCTGAT...TGTGTCCGTACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TCCTTGTTTTATGACTTAGAAAATCTGAGGTCCAGAAGAGTTGGTTGTGTGTCCAATTCACGAAGCCACTaGTTGGGGTCCAGCATCAGG +
Preference number: 5 (lower is better)
Translates to: SLFYDLENLRSRRVGCVSNSRSH*LGSSIR
Trigger: CCTGATGCTGGACCCCAACAAGTGGCTTCGTGAATT...GGACACACAACCAACTCTTCTGGACCTCAGATTTTCTAAGTCATAAAACAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACGGAGAACTGGGAGGTTaGTACTCTGAGGTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: VNIYSAAIPIRRHHYKHNGELGG*YSEVLD
Trigger: GTCCAAGACCTCAGAGTACAAACCTCCCAGTTCTCC...GTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp AGAGTCTCTTTGCTAGCGGTCCTATGTACAGAGTTCTTCAAGGTTCCTCAAAGTATTGGACCTTTTCTTTaGGTTTTTGAGGCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: RVSLLAVLCTEFFKVPQSIGPFL*VFEAPA
Trigger: TGCAGGAGCCTCAAAAACCAAAAGAAAAGGTCCAAT...ACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp ACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTAGCATCAGGTACTGCTaGGTCGCTTCTAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TFIQLQYRLGDITTNTTSSIRYC*VASSSF
Trigger: GAAGGAGCTAGAAGCGACCAAGCAGTACCTGATGCT...AGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp GTTTTCTGTTTTGTTGATTTCTTCTTGACTAGCACCATCTGGACACAAGAAAGTAGCATCAGGTACTGCTaGGTCGCTTCTAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VFCFVDFFLTSTIWTQESSIRYC*VASSSF
Trigger: GAAGGAGCTAGAAGCGACCAAGCAGTACCTGATGCT...ACTTTCTTGTGTCCAGATGGTGCTAGTCAAGAAGAAATCAACAAAACAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp ATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTTAGTGTCCTTCACCTTGTaGACAGCCCTCAGGAGACAG +
Preference number: 5 (lower is better)
Translates to: IYSAAIPIRRHHYKHNFLVSFTL*TALRRQ
Trigger: CTGTCTCCTGAGGGCTGTCAACAAGGTGAAGGACAC...TAAGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp ATTTCCTCCTTCCACATGTTGGTGTCTGTACCTTTCTTTCCTATGGCAAACAAAATTTTCAGCTTGGCATaGAAGCACATGACCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ISSFHMLVSVPFFPMANKIFSLA*KHMTSL
Trigger: CAAGGAGGTCATGTGCTTCAATGCCAAGCTGAAAAT...TTTGTTTGCCATAGGAAAGAAAGGTACAGACACCAACATGTGGAAGGAGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp ACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTTCTGACTTCCTGATAGTATaGGGAACCTGGAGTTTGTCG +
Preference number: 5 (lower is better)
Translates to: TFIQLQYRLGDITTNTTSDFLIV*GTWSLS
Trigger: CGACAAACTCCAGGTTCCCAATACTATCAGGAAGTC...AGAAGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS-3UTR CAA 90 bp TTAACATTTATTCAGCTGCAATACCGATTAGGAGACATCACTACAAACACAACTGAGCTTGATGTGTACTaGGTCTTCTTCTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: LTFIQLQYRLGDITTNTTELDVY*VFFFFI
Trigger: GATGAAGAAGAAGAAGACCAAGTACACATCAAGCTC...AGTTGTGTTTGTAGTGATGTCTCCTAATCGGTATTGCAGCTGAATAAATGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp GCTGCCCGAGCCAGGGGAGCCGGTGCCGAAGCCGGGTaGGCCGCCCAGAGAGCCGGGCGAGCTGGTACCAAT +
Preference number: 6 (lower is better)
Translates to: AARARGAGAEAG*AAQRAGRAGTN
Trigger: ATTGGTACCAGCTCGCCCGGCTCTCTGGGCGGCTCACCCGGCTTCGGCACCGGCTCCCCTGGCTCGGGCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS GCA 72 bp TGGGCCGGCTGCCGGCGCGCGACTCCTCGTAAGCCTTaGGGTACCAGCTCTCAGGAGAGCAGGGCGCTGAGG +
Preference number: 6 (lower is better)
Translates to: WAGCRRATPRKP*GTSSQESRALR
Trigger: CCTCAGCGCCCTGCTCTCCTGAGAGCTGGTACCGCAAGGCTTACGAGGAGTCGCGCGCCGGCAGCCGGCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CCA 72 bp CGAAGCCGGGTGAGCCGCCCAGAGAGCCGGGCGAGCTaGTACCAATGCCCGGAGATGCAGGTCCCGGAGAGC +
Preference number: 6 (lower is better)
Translates to: RSRVSRPESRAS*YQCPEMQVPES
Trigger: GCTCTCCGGGACCTGCATCTCCGGGCATTGGTACCAGCTCGCCCGGCTCTCTGGGCGGCTCACCCGGCTTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CAA 90 bp CTCCTCGGGCCCGCACTGCCCTGGAGCAGCTCCGAAATGCGCCCGTaGACCGCTCTTAGCGGCAGTTTGGAAGCCAGCCCAGAGCCCCGG +
Preference number: 6 (lower is better)
Translates to: LLGPALPWSSSEMRP*TALSGSLEASPEPR
Trigger: CCGGGGCTCTGGGCTGGCTTCCAAACTGCCGCTAAGAGCGGTCAACGGGCGCATTTCGGAGCTGCTCCAGGGCAGTGCGGGCCCGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp GCCCGCAGCTGTGCACTCCTCGGGCCCGCACTGCCCTaGAGCAGCTCCGAAATGCGCCCGTTGACCGCTCTT +
Preference number: 6 (lower is better)
Translates to: ARSCALLGPALP*SSSEMRPLTAL
Trigger: AAGAGCGGTCAACGGGCGCATTTCGGAGCTGCTCCAGGGCAGTGCGGGCCCGAGGAGTGCACAGCTGCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp GGGTCCTTTCCCGGGAGGGGTCCCGGCAGCAGCAGCTaGAGAGCCTGCCTCTTCAGCTCCACCAAGCGGGCG +
Preference number: 6 (lower is better)
Translates to: GSFPGRGPGSSS*RACLFSSTKRA
Trigger: CGCCCGCTTGGTGGAGCTGAAGAGGCAGGCTCTCAAGCTGCTGCTGCCGGGACCCCTCCCGGGAAAGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS TCA 72 bp ACTGGCTGGCCTTGGGAGAGGCCCCTGTGGACTGAGTaGTGCCACAGCTGGGTGGTGAGGCGCCAGTGCTGC +
Preference number: 6 (lower is better)
Translates to: TGWPWERPLWTE*CHSWVVRRQCC
Trigger: GCAGCACTGGCGCCTCACCACCCAGCTGTGGCATCACTCAGTCCACAGGGGCCTCTCCCAAGGCCAGCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp CCCGGGAGGGGTCCCGGCAGCAGCAGCTTGAGAGCCTaGCTCTTCAGCTCCACCAAGCGGGCGTTACAGTTC +
Preference number: 6 (lower is better)
Translates to: PGRGPGSSSLRA*LFSSTKRALQF
Trigger: GAACTGTAACGCCCGCTTGGTGGAGCTGAAGAGGCAGGCTCTCAAGCTGCTGCTGCCGGGACCCCTCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CCA 72 bp GGATCCACCGGAGCCCGGGCATGGAAGGGTCTCAGCTaGGTGGGCCTGCGCATTCTGCCTTCCTCACAGGAG +
Preference number: 6 (lower is better)
Translates to: GSTGARAWKGLS*VGLRILPSSQE
Trigger: CTCCTGTGAGGAAGGCAGAATGCGCAGGCCCACCCAGCTGAGACCCTTCCATGCCCGGGCTCCGGTGGATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp GAAGCCAGCCCAGAGCCCCGGTTCCTGCTGAGCGACTaGGTGGACCAGGACATGTGTTTCCCGCTGGGCGGT +
Preference number: 6 (lower is better)
Translates to: EASPEPRFLLSD*VDQDMCFPLGG
Trigger: ACCGCCCAGCGGGAAACACATGTCCTGGTCCACCCAGTCGCTCAGCAGGAACCGGGGCTCTGGGCTGGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp GCTGGAGCCCACCCATGTGGCGAGACCCCACCAGTGTaGGAATGCTGGAGATCGGAGGGGGTGAGCCCAGAG +
Preference number: 6 (lower is better)
Translates to: AGAHPCGETPPV*ECWRSEGVSPE
Trigger: CTCTGGGCTCACCCCCTCCGATCTCCAGCATTCCCACACTGGTGGGGTCTCGCCACATGGGTGGGCTCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CAA 90 bp GTGCTGCGACCCAGGCTCCTCCCAGTGCGGGGCATGGTACTATCTTaGCCGGCATGCATGCGGGAGCTCACCGACGACAGGCTTTCGGCC +
Preference number: 6 (lower is better)
Translates to: VLRPRLLPVRGMVLS*PACMRELTDDRLSA
Trigger: GGCCGAAAGCCTGTCGTCGGTGAGCTCCCGCATGCATGCCGGCAAAGATAGTACCATGCCCCGCACTGGGAGGAGCCTGGGTCGCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp CCGCACTGCCCTGGAGCAGCTCCGAAATGCGCCCGTTaGCCGCTCTTAGCGGCAGTTTGGAAGCCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: PHCPGAAPKCAR*PLLAAVWKPAQ
Trigger: CTGGGCTGGCTTCCAAACTGCCGCTAAGAGCGGTCAACGGGCGCATTTCGGAGCTGCTCCAGGGCAGTGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp CAGATGGGGTCTTCACAGAGGTACACGCCTGGGGACTaGCCGTCCTGTAGGCTGCCCGTGGCCACCTCAGAC +
Preference number: 6 (lower is better)
Translates to: QMGSSQRYTPGD*PSCRLPVATSD
Trigger: GTCTGAGGTGGCCACGGGCAGCCTACAGGACGGGCAGTCCCCAGGCGTGTACCTCTGTGAAGACCCCATCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp GGCAATGGCGGCGTCCAGGAAGAAGGCAGCTTTCTCTaGGGTGGGGGCCCGGAGCTCACTCTGGTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: GNGGVQEEGSFL*GGGPELTLVLQ
Trigger: CTGCAGAACCAGAGTGAGCTCCGGGCCCCCACCGCAGAGAAAGCTGCCTTCTTCCTGGACGCCGCCATTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp AGGCGGCTGCCTCTGAGCTGCTGCTGCTCAGCCTGTTaGCTGAGCTGGGCCTGCCATCCAGTTCCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: RRLPLSCCCSAC*LSWACHPVPAL
Trigger: CAGAGCAGGAACTGGATGGCAGGCCCAGCTCAGGCAACAGGCTGAGCAGCAGCAGCTCAGAGGCAGCCGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp CCAGGCTCCTCCCAGTGCGGGGCATGGTACTATCTTTaGCGGCATGCATGCGGGAGCTCACCGACGACAGGC +
Preference number: 6 (lower is better)
Translates to: PGSSQCGAWYYL*RHACGSSPTTG
Trigger: GCCTGTCGTCGGTGAGCTCCCGCATGCATGCCGGCAAAGATAGTACCATGCCCCGCACTGGGAGGAGCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp GTGAGGCGCCAGTGCTGCGACCCAGGCTCCTCCCAGTaGGGGGCATGGTACTATCTTTGCCGGCATGCATGC +
Preference number: 6 (lower is better)
Translates to: VRRQCCDPGSSQ*GAWYYLCRHAC
Trigger: GCATGCATGCCGGCAAAGATAGTACCATGCCCCGCACTGGGAGGAGCCTGGGTCGCAGCACTGGCGCCTCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp AGCTCCCCACTCAGGACACTGCTGTTATCACTACCGTaGCCGCTGCTGCAGCGGTGCGGCTTCCTCGGAGGG +
Preference number: 6 (lower is better)
Translates to: SSPLRTLLLSLP*PLLQRCGFLGG
Trigger: CCCTCCGAGGAAGCCGCACCGCTGCAGCAGCGGGCACGGTAGTGATAACAGCAGTGTCCTGAGTGGGGAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp GCAAGGGGGAATTCTGGATCCACCGGAGCCCGGGCATaGAAGGGTCTCAGCTGGGTGGGCCTGCGCATTCTG +
Preference number: 6 (lower is better)
Translates to: ARGNSGSTGARA*KGLSWVGLRIL
Trigger: CAGAATGCGCAGGCCCACCCAGCTGAGACCCTTCCATGCCCGGGCTCCGGTGGATCCAGAATTCCCCCTTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp CCCGCACTGCCCTGGAGCAGCTCCGAAATGCGCCCGTaGACCGCTCTTAGCGGCAGTTTGGAAGCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: PALPWSSSEMRP*TALSGSLEASP
Trigger: TGGGCTGGCTTCCAAACTGCCGCTAAGAGCGGTCAACGGGCGCATTTCGGAGCTGCTCCAGGGCAGTGCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp TGGAGCAGCTCCGAAATGCGCCCGTTGACCGCTCTTAGCGGCAGTTaGGAAGCCAGCCCAGAGCCCCGGTTCCTGCTGAGCGACTGGGTG +
Preference number: 6 (lower is better)
Translates to: WSSSEMRPLTALSGS*EASPEPRFLLSDWV
Trigger: CACCCAGTCGCTCAGCAGGAACCGGGGCTCTGGGCTGGCTTCCAAACTGCCGCTAAGAGCGGTCAACGGGCGCATTTCGGAGCTGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp GCCCATGGGTCTGGGCTTGCCCTCCACGAAGCCACATaGGTTCAGACTCTCCCGGCTGCTCTGGAGACTGGG +
Preference number: 6 (lower is better)
Translates to: AHGSGLALHEAT*VQTLPAALETG
Trigger: CCCAGTCTCCAGAGCAGCCGGGAGAGTCTGAACTCATGTGGCTTCGTGGAGGGCAAGCCCAGACCCATGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp GCAGTTTGGAAGCCAGCCCAGAGCCCCGGTTCCTGCTaGGCGACTGGGTGGACCAGGACATGTGTTTCCCGC +
Preference number: 6 (lower is better)
Translates to: AVWKPAQSPGSC*ATGWTRTCVSR
Trigger: GCGGGAAACACATGTCCTGGTCCACCCAGTCGCTCAGCAGGAACCGGGGCTCTGGGCTGGCTTCCAAACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp CCCCACCAGTGTGGGAATGCTGGAGATCGGAGGGGGTaGGCCCAGAGAGGTGTCATAGTGCTCGCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: PHQCGNAGDRRG*AQRGVIVLAAS
Trigger: GCTGGCAGCGAGCACTATGACACCTCTCTGGGCTCACCCCCTCCGATCTCCAGCATTCCCACACTGGTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS GCA 72 bp AGAGGTACACGCCTGGGGACTGCCCGTCCTGTAGGCTaGCCGTGGCCACCTCAGACAACAGGTCTCGAAGGT +
Preference number: 6 (lower is better)
Translates to: RGTRLGTARPVG*PWPPQTTGLEG
Trigger: ACCTTCGAGACCTGTTGTCTGAGGTGGCCACGGGCAGCCTACAGGACGGGCAGTCCCCAGGCGTGTACCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp CTCCCAGTGCGGGGCATGGTACTATCTTTGCCGGCATaGATGCGGGAGCTCACCGACGACAGGCTTTCGGCC +
Preference number: 6 (lower is better)
Translates to: LPVRGMVLSLPA*MRELTDDRLSA
Trigger: GGCCGAAAGCCTGTCGTCGGTGAGCTCCCGCATGCATGCCGGCAAAGATAGTACCATGCCCCGCACTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp GACGCGGCTCTCCAAGCGCTCTGTCACACCCTCCAGTaGCTCCAGGTACTCCAGGGAATCCAGCTGCAGGAC +
Preference number: 6 (lower is better)
Translates to: DAALQALCHTLQ*LQVLQGIQLQD
Trigger: GTCCTGCAGCTGGATTCCCTGGAGTACCTGGAGGCACTGGAGGGTGTGACAGAGCGCTTGGAGAGCCGCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp ACACGCCTGGGGACTGCCCGTCCTGTAGGCTGCCCGTaGCCACCTCAGACAACAGGTCTCGAAGGTTCTCCT +
Preference number: 6 (lower is better)
Translates to: TRLGTARPVGCP*PPQTTGLEGSP
Trigger: AGGAGAACCTTCGAGACCTGTTGTCTGAGGTGGCCACGGGCAGCCTACAGGACGGGCAGTCCCCAGGCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp CAGCCTCTGCTGCCTCCCCCGGCCGGCTGTCACCTCTaGTCTTCTGTAGGGCTGGCACAATGGGCACAAAGT +
Preference number: 6 (lower is better)
Translates to: QPLLPPPAGCHL*SSVGLAQWAQS
Trigger: ACTTTGTGCCCATTGTGCCAGCCCTACAGAAGACCAGAGGTGACAGCCGGCCGGGGGAGGCAGCAGAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp AGACTGGGGCTCTGTGTGAGCTGGGAGGTACTGTGCTaGCTACTGCTGCCCGGGATGCTCCGTGGTGAGGCT +
Preference number: 6 (lower is better)
Translates to: RLGLCVSWEVLC*LLLPGMLRGEA
Trigger: AGCCTCACCACGGAGCATCCCGGGCAGCAGTAGCCAGCACAGTACCTCCCAGCTCACACAGAGCCCCAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp CCCTGTGGAAGTCTCACTGGCCACACAGGAACCCTGTaGGGCTGGGACACTGCTGGCTGCAGGCTTGTCAGC +
Preference number: 6 (lower is better)
Translates to: PCGSLTGHTGTL*GWDTAGCRLVS
Trigger: GCTGACAAGCCTGCAGCCAGCAGTGTCCCAGCCCCACAGGGTTCCTGTGTGGCCAGTGAGACTTCCACAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CAA 72 bp GTCACAGTAGGGGCAGGGGACCGATTCCGCTGTGCCTaGGAGGCTGGAAGCTCTGTGCCTTCCCTCTCGGTC +
Preference number: 6 (lower is better)
Translates to: VTVGAGDRFRCA*EAGSSVPSLSV
Trigger: GACCGAGAGGGAAGGCACAGAGCTTCCAGCCTCCAAGGCACAGCGGAATCGGTCCCCTGCCCCTACTGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp AAGGCGGCTGCCTCTGAGCTGCTGCTGCTCAGCCTGTaGCCTGAGCTGGGCCTGCCATCCAGTTCCTGCTCT +
Preference number: 6 (lower is better)
Translates to: KAAASELLLLSL*PELGLPSSSCS
Trigger: AGAGCAGGAACTGGATGGCAGGCCCAGCTCAGGCAACAGGCTGAGCAGCAGCAGCTCAGAGGCAGCCGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp TCCGAAATGCGCCCGTTGACCGCTCTTAGCGGCAGTTaGGAAGCCAGCCCAGAGCCCCGGTTCCTGCTGAGC +
Preference number: 6 (lower is better)
Translates to: SEMRPLTALSGS*EASPEPRFLLS
Trigger: GCTCAGCAGGAACCGGGGCTCTGGGCTGGCTTCCAAACTGCCGCTAAGAGCGGTCAACGGGCGCATTTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp GACAGACTGGCAATGCCTAGCCTCGGGGAGCCCATGGGTCTGGGCTaGCCCTCCACGAAGCCACATGAGTTCAGACTCTCCCGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: DRLAMPSLGEPMGLG*PSTKPHEFRLSRLL
Trigger: GAGCAGCCGGGAGAGTCTGAACTCATGTGGCTTCGTGGAGGGCAAGCCCAGACCCATGGGCTCCCCGAGGCTAGGCATTGCCAGTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp GAGAAAGCAGGGTCCTTTCCCGGGAGGGGTCCCGGCAGCAGCAGCTaGAGAGCCTGCCTCTTCAGCTCCACCAAGCGGGCGTTACAGTTC +
Preference number: 6 (lower is better)
Translates to: EKAGSFPGRGPGSSS*RACLFSSTKRALQF
Trigger: GAACTGTAACGCCCGCTTGGTGGAGCTGAAGAGGCAGGCTCTCAAGCTGCTGCTGCCGGGACCCCTCCCGGGAAAGGACCCTGCTTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CAA 90 bp CTGCTGCGTGTCACAGTAGGGGCAGGGGACCGATTCCGCTGTGCCTaGGAGGCTGGAAGCTCTGTGCCTTCCCTCTCGGTCAATTGGCCA +
Preference number: 6 (lower is better)
Translates to: LLRVTVGAGDRFRCA*EAGSSVPSLSVNWP
Trigger: TGGCCAATTGACCGAGAGGGAAGGCACAGAGCTTCCAGCCTCCAAGGCACAGCGGAATCGGTCCCCTGCCCCTACTGTGACACGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp CTGGGCGGTAGGTTGGAGCTCTGGCCCACAGACTGTGGCAGGGACTaGGTGGAGAAGCTGAGGGTTTTGGTGGTGGAGGTGGACAGGCTG +
Preference number: 6 (lower is better)
Translates to: LGGRLELWPTDCGRD*VEKLRVLVVEVDRL
Trigger: CAGCCTGTCCACCTCCACCACCAAAACCCTCAGCTTCTCCACCAAGTCCCTGCCACAGTCTGTGGGCCAGAGCTCCAACCTACCGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp AGGGGGCTGCTGGTGTTGCTGCTGCCACCACCGTGTTaGGGGCTGGCCCTGTTCTTCTGGTCCAAGCTAGAC +
Preference number: 6 (lower is better)
Translates to: RGLLVLLLPPPC*GLALFFWSKLD
Trigger: GTCTAGCTTGGACCAGAAGAACAGGGCCAGCCCTCAACACGGTGGTGGCAGCAGCAACACCAGCAGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp CACTGCTGGCTGCAGGCTTGTCAGCATTGTAGCGGTTaGGCGCTGACTCTGTCAGTCCCTCGCGGCCGGTCT +
Preference number: 6 (lower is better)
Translates to: HCWLQACQHCSG*ALTLSVPRGRS
Trigger: AGACCGGCCGCGAGGGACTGACAGAGTCAGCGCTCAACCGCTACAATGCTGACAAGCCTGCAGCCAGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS GCA 72 bp GTCAGGGCCCACCTCGGGCTTCTCTCTGCACACCACTaGCGTGTTCTGGATGCTGCTGACAAACTCCGAGGC +
Preference number: 6 (lower is better)
Translates to: VRAHLGLLSAHH*RVLDAADKLRG
Trigger: GCCTCGGAGTTTGTCAGCAGCATCCAGAACACGGCAGTGGTGTGCAGAGAGAAGCCCGAGGTGGGCCCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp CGTTATCAGTCCCTTGAAAGGCGGCTGCCTCTGAGCTaGTGCTGCTCAGCCTGTTGCCTGAGCTGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: RYQSLERRLPLS*CCSACCLSWAC
Trigger: GCAGGCCCAGCTCAGGCAACAGGCTGAGCAGCAGCAGCTCAGAGGCAGCCGCCTTTCAAGGGACTGATAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp CAGTGCGGGGCATGGTACTATCTTTGCCGGCATGCATaGGGGAGCTCACCGACGACAGGCTTTCGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: QCGAWYYLCRHA*GSSPTTGFRPS
Trigger: AGAGGGCCGAAAGCCTGTCGTCGGTGAGCTCCCGCATGCATGCCGGCAAAGATAGTACCATGCCCCGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp TCCCCATGGCAGGTGGTAGCTCCCCACTCAGGACACTaGTGTTATCACTACCGTGCCCGCTGCTGCAGCGGT +
Preference number: 6 (lower is better)
Translates to: SPWQVVAPHSGH*CYHYRARCCSG
Trigger: ACCGCTGCAGCAGCGGGCACGGTAGTGATAACAGCAGTGTCCTGAGTGGGGAGCTACCACCTGCCATGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp GCAGCTTTCTCTGCGGTGGGGGCCCGGAGCTCACTCTaGTTCTGCAGCTGTGTGCCACAGATGGGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: AAFSAVGARSSL*FCSCVPQMGSS
Trigger: TGAAGACCCCATCTGTGGCACACAGCTGCAGAACCAGAGTGAGCTCCGGGCCCCCACCGCAGAGAAAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp TGCGGACAGGAGGCAGAGGCGGGGTCCCTTTGGGCCTaGCCAGGACGCAATGCTTGGGTGAAGCAACTTTCC +
Preference number: 6 (lower is better)
Translates to: CGQEAEAGSLWA*PGRNAWVKQLS
Trigger: GGAAAGTTGCTTCACCCAAGCATTGCGTCCTGGCAAGGCCCAAAGGGACCCCGCCTCTGCCTCCTGTCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp GGCTGCAGGCTTGTCAGCATTGTAGCGGTTGAGCGCTaGCTCTGTCAGTCCCTCGCGGCCGGTCTCTGTCAT +
Preference number: 6 (lower is better)
Translates to: GCRLVSIVAVER*LCQSLAAGLCH
Trigger: ATGACAGAGACCGGCCGCGAGGGACTGACAGAGTCAGCGCTCAACCGCTACAATGCTGACAAGCCTGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS TCA 72 bp CTTCTGGGCAGCTCGTGCGAAGAAGGAAGCGGCCACTaGGGTCCCTGTGGAAGTCTCACTGGCCACACAGGA +
Preference number: 6 (lower is better)
Translates to: LLGSSCEEGSGH*GPCGSLTGHTG
Trigger: TCCTGTGTGGCCAGTGAGACTTCCACAGGGACCTCAGTGGCCGCTTCCTTCTTCGCACGAGCTGCCCAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS GCA 72 bp GCACGTCGGGCTGAAGCAAGGATTCACTGGAGACCATaGCAGAGTCCTTGCTCAGGGAAGGTGGTGGGGCAG +
Preference number: 6 (lower is better)
Translates to: ARRAEARIHWRP*QSPCSGKVVGQ
Trigger: CTGCCCCACCACCTTCCCTGAGCAAGGACTCTGGCATGGTCTCCAGTGAATCCTTGCTTCAGCCCGACGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp CCAAAGCACGTCTGGGCTATGAAGCTGTGGCATGACTaGTCGCCATCACTGCCCGCGCTCATCTCGCTCAGC +
Preference number: 6 (lower is better)
Translates to: PKHVWAMKLWHD*SPSLPALISLS
Trigger: GCTGAGCGAGATGAGCGCGGGCAGTGATGGCGAGCAGTCATGCCACAGCTTCATAGCCCAGACGTGCTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp GAGGGGGTGAGCCCAGAGAGGTGTCATAGTGCTCGCTaGCAGCTGCCTGCTCCAAGGTCAGCACCATTTGGA +
Preference number: 6 (lower is better)
Translates to: EGVSPERCHSAR*QLPAPRSAPFG
Trigger: TCCAAATGGTGCTGACCTTGGAGCAGGCAGCTGGCAGCGAGCACTATGACACCTCTCTGGGCTCACCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CCA 72 bp CGTAGCTGCTGGCTGCGGCCGAGATGTGTGCGATCATaGTGGTGCGACAGTTCACATTCCCCAGAGACTCCC +
Preference number: 6 (lower is better)
Translates to: RSCWLRPRCVRS*WCDSSHSPETP
Trigger: GGGAGTCTCTGGGGAATGTGAACTGTCGCACCACCATGATCGCACACATCTCGGCCGCAGCCAGCAGCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp TCTTCATCCTTAAGACTCTCGACGCGATCTGGATGGTaGACAGGGTCTCCGCGTAGCTGCTGGCTGCGGCCG +
Preference number: 6 (lower is better)
Translates to: SSSLRLSTRSGW*TGSPRSCWLRP
Trigger: CGGCCGCAGCCAGCAGCTACGCGGAGACCCTGTCCACCATCCAGATCGCGTCGAGAGTCTTAAGGATGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp GGGGAGTGCGCACGTCGGGCTGAAGCAAGGATTCACTaGAGACCATGCCAGAGTCCTTGCTCAGGGAAGGTG +
Preference number: 6 (lower is better)
Translates to: GECARRAEARIH*RPCQSPCSGKV
Trigger: CACCTTCCCTGAGCAAGGACTCTGGCATGGTCTCCAGTGAATCCTTGCTTCAGCCCGACGTGCGCACTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp TCCCCATGCCCAAAGCACGTCTGGGCTATGAAGCTGTaGCATGACTGCTCGCCATCACTGCCCGCGCTCATC +
Preference number: 6 (lower is better)
Translates to: SPCPKHVWAMKL*HDCSPSLPALI
Trigger: GATGAGCGCGGGCAGTGATGGCGAGCAGTCATGCCACAGCTTCATAGCCCAGACGTGCTTTGGGCATGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp GACATGTGTTTCCCGCTGGGCGGTAGGTTGGAGCTCTaGCCCACAGACTGTGGCAGGGACTTGGTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: DMCFPLGGRLEL*PTDCGRDLVEK
Trigger: CTTCTCCACCAAGTCCCTGCCACAGTCTGTGGGCCAGAGCTCCAACCTACCGCCCAGCGGGAAACACATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp GGGATGTACCCTTCGCAGCTGCTCAGGCTGGCTGTGTaGGAGATGGTGACCATGGCCTTGCCCACCGTTGAG +
Preference number: 6 (lower is better)
Translates to: GMYPSQLLRLAV*EMVTMALPTVE
Trigger: CTCAACGGTGGGCAAGGCCATGGTCACCATCTCCAACACAGCCAGCCTGAGCAGCTGCGAAGGGTACATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp GGAGGCAGAGGCGGGGTCCCTTTGGGCCTTGCCAGGACGCAATGCTaGGGTGAAGCAACTTTCCTCTCTAGGGTTGTCTTCGAGGATGGG +
Preference number: 6 (lower is better)
Translates to: GGRGGVPLGLARTQC*GEATFLSRVVFEDG
Trigger: CCCATCCTCGAAGACAACCCTAGAGAGGAAAGTTGCTTCACCCAAGCATTGCGTCCTGGCAAGGCCCAAAGGGACCCCGCCTCTGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp GGACTCATTCCAACTGGGGGAGTGCGCACGTCGGGCTaGAGCAAGGATTCACTGGAGACCATGCCAGAGTCC +
Preference number: 6 (lower is better)
Translates to: GLIPTGGVRTSG*SKDSLETMPES
Trigger: GGACTCTGGCATGGTCTCCAGTGAATCCTTGCTTCAGCCCGACGTGCGCACTCCCCCAGTTGGAATGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp ATGCCCAAAGCACGTCTGGGCTATGAAGCTGTGGCATaGCTGCTCGCCATCACTGCCCGCGCTCATCTCGCT +
Preference number: 6 (lower is better)
Translates to: MPKARLGYEAVA*LLAITARAHLA
Trigger: AGCGAGATGAGCGCGGGCAGTGATGGCGAGCAGTCATGCCACAGCTTCATAGCCCAGACGTGCTTTGGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp AACTCCGAGGCTGGGGGTTCTGCCATGGCTTCCCCATaGCCAAAGCACGTCTGGGCTATGAAGCTGTGGCAT +
Preference number: 6 (lower is better)
Translates to: NSEAGGSAMASP*PKHVWAMKLWH
Trigger: ATGCCACAGCTTCATAGCCCAGACGTGCTTTGGGCATGGGGAAGCCATGGCAGAACCCCCAGCCTCGGAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp GCGGGATTTAGGACTGGCCAGCAGGAGCTTGCTCACTaGAGAGATCTTAGACTGGCTGGCCTTGGGAGAGGC +
Preference number: 6 (lower is better)
Translates to: AGFRTGQQELAH*RDLRLAGLGRG
Trigger: GCCTCTCCCAAGGCCAGCCAGTCTAAGATCTCTGCAGTGAGCAAGCTCCTGCTGGCCAGTCCTAAATCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp CGTCACAATCCTGTTGGTTGCTTCGCCTCGAGGCAATaGCGGCGTCCAGGAAGAAGGCAGCTTTCTCTGCGG +
Preference number: 6 (lower is better)
Translates to: RHNPVGCFASRQ*RRPGRRQLSLR
Trigger: CCGCAGAGAAAGCTGCCTTCTTCCTGGACGCCGCCATTGCCTCGAGGCGAAGCAACCAACAGGATTGTGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp ACGAAGCCACATGAGTTCAGACTCTCCCGGCTGCTCTaGAGACTGGGGCTCTGTGTGAGCTGGGAGGTACTG +
Preference number: 6 (lower is better)
Translates to: TKPHEFRLSRLL*RLGLCVSWEVL
Trigger: CAGTACCTCCCAGCTCACACAGAGCCCCAGTCTCCAGAGCAGCCGGGAGAGTCTGAACTCATGTGGCTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp TGCCGTGTTCTGGATGCTGCTGACAAACTCCGAGGCTaGGGGTTCTGCCATGGCTTCCCCATGCCCAAAGCA +
Preference number: 6 (lower is better)
Translates to: CRVLDAADKLRG*GFCHGFPMPKA
Trigger: TGCTTTGGGCATGGGGAAGCCATGGCAGAACCCCCAGCCTCGGAGTTTGTCAGCAGCATCCAGAACACGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp CCTCTGAGCTGCTGCTGCTCAGCCTGTTGCCTGAGCTaGGCCTGCCATCCAGTTCCTGCTCTGACTTACCTT +
Preference number: 6 (lower is better)
Translates to: PLSCCCSACCLS*ACHPVPALTYL
Trigger: AAGGTAAGTCAGAGCAGGAACTGGATGGCAGGCCCAGCTCAGGCAACAGGCTGAGCAGCAGCAGCTCAGAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp CTTGGGAGGCTGCTTGACTTTAGGTTTCGGTTGACATaGAGGGGACTTTGGGCCACCAAGCCAGGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: LGRLLDFRFRLT*RGLWATKPGRA
Trigger: GGCCCTGCCTGGCTTGGTGGCCCAAAGTCCCCTCCATGTCAACCGAAACCTAAAGTCAAGCAGCCTCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp GTTGGACTCATCAGGGAAGCAAGCCAAGAAGGTAGCTaGCTGGTTCAGGGGGCTGCTGGTGTTGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: VGLIREASQEGS*LVQGAAGVAAA
Trigger: GGCAGCAGCAACACCAGCAGCCCCCTGAACCAGCCAGCTACCTTCTTGGCTTGCTTCCCTGATGAGTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp ACCAGCTCTCAGGAGAGCAGGGCGCTGAGGGCTTGGTaGGCGAGCACATTTCGTTCACCCCGTATTTCTTGC +
Preference number: 6 (lower is better)
Translates to: TSSQESRALRAW*ASTFRSPRISC
Trigger: GCAAGAAATACGGGGTGAACGAAATGTGCTCGCCCACCAAGCCCTCAGCGCCCTGCTCTCCTGAGAGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CCA 72 bp GGAAGTCTCACTGGCCACACAGGAACCCTGTGGGGCTaGGACACTGCTGGCTGCAGGCTTGTCAGCATTGTA +
Preference number: 6 (lower is better)
Translates to: GSLTGHTGTLWG*DTAGCRLVSIV
Trigger: TACAATGCTGACAAGCCTGCAGCCAGCAGTGTCCCAGCCCCACAGGGTTCCTGTGTGGCCAGTGAGACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CAA 72 bp GAGTTGCGGTGGTCATCCTCGTCACAATCCTGTTGGTaGCTTCGCCTCGAGGCAATGGCGGCGTCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: ELRWSSSSQSCW*LRLEAMAASRK
Trigger: CTTCCTGGACGCCGCCATTGCCTCGAGGCGAAGCAACCAACAGGATTGTGACGAGGATGACCACCGCAACTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp ATGGGAGTTGCGGTGGTCATCCTCGTCACAATCCTGTaGGTTGCTTCGCCTCGAGGCAATGGCGGCGTCCAG +
Preference number: 6 (lower is better)
Translates to: MGVAVVILVTIL*VASPRGNGGVQ
Trigger: CTGGACGCCGCCATTGCCTCGAGGCGAAGCAACCAACAGGATTGTGACGAGGATGACCACCGCAACTCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp AGGTTGGAGCTCTGGCCCACAGACTGTGGCAGGGACTaGGTGGAGAAGCTGAGGGTTTTGGTGGTGGAGGTG +
Preference number: 6 (lower is better)
Translates to: RLELWPTDCGRD*VEKLRVLVVEV
Trigger: CACCTCCACCACCAAAACCCTCAGCTTCTCCACCAAGTCCCTGCCACAGTCTGTGGGCCAGAGCTCCAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp ACTTTCACCTTGCCCATGCCAGGAGTGTCCTTCACCTaGTTGACAGCCCTCAGGAGACAGGGTGGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: TFTLPMPGVSFT*LTALRRQGGAG
Trigger: CCCAGCCCCACCCTGTCTCCTGAGGGCTGTCAACAAGGTGAAGGACACTCCTGGCATGGGCAAGGTGAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CAA 90 bp TTCTGTAGGGCTGGCACAATGGGCACAAAGTCTGGGGGCCCCTCATaGTCAGTGAGTTCCTTGTCAGACAGGGCTGTGCCATTGGGCCCG +
Preference number: 6 (lower is better)
Translates to: FCRAGTMGTKSGGPS*SVSSLSDRAVPLGP
Trigger: CGGGCCCAATGGCACAGCCCTGTCTGACAAGGAACTCACTGACAATGAGGGGCCCCCAGACTTTGTGCCCATTGTGCCAGCCCTACAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp TCTCTCCTTGTACTGGGTTCCTTGCTTTCCTGGGCCTGGGATGCTTaGGGGCTCACCTTTGGGGTGGCAGTGGAGGACTCAGGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: SLLVLGSLLSWAWDA*GLTFGVAVEDSGSC
Trigger: GCAAGAGCCTGAGTCCTCCACTGCCACCCCAAAGGTGAGCCCCAAAGCATCCCAGGCCCAGGAAAGCAAGGAACCCAGTACAAGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp AGGATGTTTCCATTGCTGGGACTGGTGGCCATCTGGAGGCTGACCTaGGCCTGGTGGGTTGGGGAGCCACTCTTCTTTTCCGCTCCGTTG +
Preference number: 6 (lower is better)
Translates to: RMFPLLGLVAIWRLT*AWWVGEPLFFSAPL
Trigger: CAACGGAGCGGAAAAGAAGAGTGGCTCCCCAACCCACCAGGCCAAGGTCAGCCTCCAGATGGCCACCAGTCCCAGCAATGGAAACATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CAA 90 bp AGCATATGGGAGTTGCGGTGGTCATCCTCGTCACAATCCTGTTGGTaGCTTCGCCTCGAGGCAATGGCGGCGTCCAGGAAGAAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: SIWELRWSSSSQSCW*LRLEAMAASRKKAA
Trigger: AGCTGCCTTCTTCCTGGACGCCGCCATTGCCTCGAGGCGAAGCAACCAACAGGATTGTGACGAGGATGACCACCGCAACTCCCATATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp GAAGAGCATATGGGAGTTGCGGTGGTCATCCTCGTCACAATCCTGTaGGTTGCTTCGCCTCGAGGCAATGGCGGCGTCCAGGAAGAAGGC +
Preference number: 6 (lower is better)
Translates to: EEHMGVAVVILVTIL*VASPRGNGGVQEEG
Trigger: GCCTTCTTCCTGGACGCCGCCATTGCCTCGAGGCGAAGCAACCAACAGGATTGTGACGAGGATGACCACCGCAACTCCCATATGCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp TTGTATGGGATGTGCTTGCTCCCGTTGACCAAAGCCAGGATGACGTaGCCCAGAGCAGACAGTGAGAGGCACAGCCCCGAGCCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: LYGMCLLPLTKARMT*PRADSERHSPEPPS
Trigger: AGAAGGAGGCTCGGGGCTGTGCCTCTCACTGTCTGCTCTGGGCAACGTCATCCTGGCTTTGGTCAACGGGAGCAAGCACATCCCATACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp TCGCAGCTGCTCAGGCTGGCTGTGTTGGAGATGGTGACCATGGCCTaGCCCACCGTTGAGATTTTGCAGCCTTTGATGGGAGCGGCTTTG +
Preference number: 6 (lower is better)
Translates to: SQLLRLAVLEMVTMA*PTVEILQPLMGAAL
Trigger: CAAAGCCGCTCCCATCAAAGGCTGCAAAATCTCAACGGTGGGCAAGGCCATGGTCACCATCTCCAACACAGCCAGCCTGAGCAGCTGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp CGCCTGGAGGTGATGTCAAAGCAGGTGATCATCATGAGATGGGCCTaGCAGAAGTTGACGCGGCTCTCCAAGCGCTCTGTCACACCCTCC +
Preference number: 6 (lower is better)
Translates to: RLEVMSKQVIIMRWA*QKLTRLSKRSVTPS
Trigger: GGAGGGTGTGACAGAGCGCTTGGAGAGCCGCGTCAACTTCTGCAAGGCCCATCTCATGATGATCACCTGCTTTGACATCACCTCCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp CAATGGGCACAAAGTCTGGGGGCCCCTCATTGTCAGTaGGTTCCTTGTCAGACAGGGCTGTGCCATTGGGCC +
Preference number: 6 (lower is better)
Translates to: QWAQSLGAPHCQ*VPCQTGLCHWA
Trigger: GGCCCAATGGCACAGCCCTGTCTGACAAGGAACTCACTGACAATGAGGGGCCCCCAGACTTTGTGCCCATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp CTTCGCAGCTGCTCAGGCTGGCTGTGTTGGAGATGGTaGCCATGGCCTTGCCCACCGTTGAGATTTTGCAGC +
Preference number: 6 (lower is better)
Translates to: LRSCSGWLCWRW*PWPCPPLRFCS
Trigger: GCTGCAAAATCTCAACGGTGGGCAAGGCCATGGTCACCATCTCCAACACAGCCAGCCTGAGCAGCTGCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp CAGCCATCCACGACTCTCCTAACGTTATCAGTCCCTTaGAAGGCGGCTGCCTCTGAGCTGCTGCTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: QPSTTLLTLSVP*KAAASELLLLS
Trigger: GCTGAGCAGCAGCAGCTCAGAGGCAGCCGCCTTTCAAGGGACTGATAACGTTAGGAGAGTCGTGGATGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp AGTTGCGGTGGTCATCCTCGTCACAATCCTGTTGGTTaGTTCGCCTCGAGGCAATGGCGGCGTCCAGGAAGA +
Preference number: 6 (lower is better)
Translates to: SCGGHPRHNPVG*FASRQWRRPGR
Trigger: TCTTCCTGGACGCCGCCATTGCCTCGAGGCGAAGCAACCAACAGGATTGTGACGAGGATGACCACCGCAACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp TGCTGGCTGCGGCCGAGATGTGTGCGATCATGGTGGTaGGACAGTTCACATTCCCCAGAGACTCCCTCAGAA +
Preference number: 6 (lower is better)
Translates to: CWLRPRCVRSWW*DSSHSPETPSE
Trigger: TTCTGAGGGAGTCTCTGGGGAATGTGAACTGTCGCACCACCATGATCGCACACATCTCGGCCGCAGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp ACCGATTCCGCTGTGCCTTGGAGGCTGGAAGCTCTGTaGCTTCCCTCTCGGTCAATTGGCCATTGTCTGAGC +
Preference number: 6 (lower is better)
Translates to: TDSAVPWRLEAL*LPSRSIGHCLS
Trigger: GCTCAGACAATGGCCAATTGACCGAGAGGGAAGGCACAGAGCTTCCAGCCTCCAAGGCACAGCGGAATCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp AGCTGCTGCTGCTCAGCCTGTTGCCTGAGCTGGGCCTaGCATCCAGTTCCTGCTCTGACTTACCTTCAGTCT +
Preference number: 6 (lower is better)
Translates to: SCCCSACCLSWA*HPVPALTYLQS
Trigger: AGACTGAAGGTAAGTCAGAGCAGGAACTGGATGGCAGGCCCAGCTCAGGCAACAGGCTGAGCAGCAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp AGAGGCGGGGTCCCTTTGGGCCTTGCCAGGACGCAATaGTTGGGTGAAGCAACTTTCCTCTCTAGGGTTGTC +
Preference number: 6 (lower is better)
Translates to: RGGVPLGLARTQ*LGEATFLSRVV
Trigger: GACAACCCTAGAGAGGAAAGTTGCTTCACCCAAGCATTGCGTCCTGGCAAGGCCCAAAGGGACCCCGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp CCCTCCAGTGCCTCCAGGTACTCCAGGGAATCCAGCTaGAGGACCTGCTCCAAGTCAAATTCACGAAGCCAC +
Preference number: 6 (lower is better)
Translates to: PSSASRYSRESS*RTCSKSNSRSH
Trigger: GTGGCTTCGTGAATTTGACTTGGAGCAGGTCCTGCAGCTGGATTCCCTGGAGTACCTGGAGGCACTGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp TCTTCTTCATCCTTAAGACTCTCGACGCGATCTGGATaGTGGACAGGGTCTCCGCGTAGCTGCTGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: SSSSLRLSTRSG*WTGSPRSCWLR
Trigger: CCGCAGCCAGCAGCTACGCGGAGACCCTGTCCACCATCCAGATCGCGTCGAGAGTCTTAAGGATGAAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp GAGAGGGAGAACTGGGAGGTTTGTACTCTGAGGTCTTaGACAGACTGGCAATGCCTAGCCTCGGGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: ERENWEVCTLRS*TDWQCLASGSP
Trigger: TGGGCTCCCCGAGGCTAGGCATTGCCAGTCTGTCCAAGACCTCAGAGTACAAACCTCCCAGTTCTCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp CCTTCGCTCCCGGCAGACATGGATTTCTTCAAAACCTaGGGACTCATTCCAACTGGGGGAGTGCGCACGTCG +
Preference number: 6 (lower is better)
Translates to: PSLPADMDFFKT*GLIPTGGVRTS
Trigger: CGACGTGCGCACTCCCCCAGTTGGAATGAGTCCCCAGGTTTTGAAGAAATCCATGTCTGCCGGGAGCGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp GGTTCTGCCATGGCTTCCCCATGCCCAAAGCACGTCTaGGCTATGAAGCTGTGGCATGACTGCTCGCCATCA +
Preference number: 6 (lower is better)
Translates to: GSAMASPCPKHV*AMKLWHDCSPS
Trigger: TGATGGCGAGCAGTCATGCCACAGCTTCATAGCCCAGACGTGCTTTGGGCATGGGGAAGCCATGGCAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp TCTCTCCTTGTACTGGGTTCCTTGCTTTCCTGGGCCTaGGATGCTTTGGGGCTCACCTTTGGGGTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: SLLVLGSLLSWA*DALGLTFGVAV
Trigger: CACTGCCACCCCAAAGGTGAGCCCCAAAGCATCCCAGGCCCAGGAAAGCAAGGAACCCAGTACAAGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp GCGGGGTCCCTTTGGGCCTTGCCAGGACGCAATGCTTaGGTGAAGCAACTTTCCTCTCTAGGGTTGTCTTCG +
Preference number: 6 (lower is better)
Translates to: AGSLWALPGRNA*VKQLSSLGLSS
Trigger: CGAAGACAACCCTAGAGAGGAAAGTTGCTTCACCCAAGCATTGCGTCCTGGCAAGGCCCAAAGGGACCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp GCTGGCACAATGGGCACAAAGTCTGGGGGCCCCTCATaGTCAGTGAGTTCCTTGTCAGACAGGGCTGTGCCA +
Preference number: 6 (lower is better)
Translates to: AGTMGTKSGGPS*SVSSLSDRAVP
Trigger: TGGCACAGCCCTGTCTGACAAGGAACTCACTGACAATGAGGGGCCCCCAGACTTTGTGCCCATTGTGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp GGCGGGGTCCCTTTGGGCCTTGCCAGGACGCAATGCTaGGGTGAAGCAACTTTCCTCTCTAGGGTTGTCTTC +
Preference number: 6 (lower is better)
Translates to: GGVPLGLARTQC*GEATFLSRVVF
Trigger: GAAGACAACCCTAGAGAGGAAAGTTGCTTCACCCAAGCATTGCGTCCTGGCAAGGCCCAAAGGGACCCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp AGGCTGCTGCGGGATTTAGGACTGGCCAGCAGGAGCTaGCTCACTGCAGAGATCTTAGACTGGCTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: RLLRDLGLASRS*LTAEILDWLAL
Trigger: CAAGGCCAGCCAGTCTAAGATCTCTGCAGTGAGCAAGCTCCTGCTGGCCAGTCCTAAATCCCGCAGCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp GCTGTGTTGGAGATGGTGACCATGGCCTTGCCCACCGTTGAGATTTaGCAGCCTTTGATGGGAGCGGCTTTGTTGCCAGACTCTTCCCCC +
Preference number: 6 (lower is better)
Translates to: AVLEMVTMALPTVEI*QPLMGAALLPDSSP
Trigger: GGGGGAAGAGTCTGGCAACAAAGCCGCTCCCATCAAAGGCTGCAAAATCTCAACGGTGGGCAAGGCCATGGTCACCATCTCCAACACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp GTCTTCATGGGGATGTACCCTTCGCAGCTGCTCAGGCTGGCTGTGTaGGAGATGGTGACCATGGCCTTGCCCACCGTTGAGATTTTGCAG +
Preference number: 6 (lower is better)
Translates to: VFMGMYPSQLLRLAV*EMVTMALPTVEILQ
Trigger: CTGCAAAATCTCAACGGTGGGCAAGGCCATGGTCACCATCTCCAACACAGCCAGCCTGAGCAGCTGCGAAGGGTACATCCCCATGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp GTGATGTCAAAGCAGGTGATCATCATGAGATGGGCCTTGCAGAAGTaGACGCGGCTCTCCAAGCGCTCTGTCACACCCTCCAGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: VMSKQVIIMRWALQK*TRLSKRSVTPSSAS
Trigger: GGAGGCACTGGAGGGTGTGACAGAGCGCTTGGAGAGCCGCGTCAACTTCTGCAAGGCCCATCTCATGATGATCACCTGCTTTGACATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp ATGCCCTTGGGAGGCTGCTTGACTTTAGGTTTCGGTTaGCATGGAGGGGACTTTGGGCCACCAAGCCAGGCA +
Preference number: 6 (lower is better)
Translates to: MPLGGCLTLGFG*HGGDFGPPSQA
Trigger: TGCCTGGCTTGGTGGCCCAAAGTCCCCTCCATGTCAACCGAAACCTAAAGTCAAGCAGCCTCCCAAGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp GGGTTGTCTTCGAGGATGGGATGCCCGAAGCAGCACTaGAGCCATTGCTGTCTGCCAGGCAATGGTAGAAGC +
Preference number: 6 (lower is better)
Translates to: GLSSRMGCPKQH*SHCCLPGNGRS
Trigger: GCTTCTACCATTGCCTGGCAGACAGCAATGGCTTCAGTGCTGCTTCGGGCATCCCATCCTCGAAGACAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp CAGAGGAGGGCAGGACCCCCTTCTGGGTGTAGACTTTaGACCTCTGAGAGGGAGAACTGGGAGGTTTGTACT +
Preference number: 6 (lower is better)
Translates to: QRRAGPPSGCRL*TSERENWEVCT
Trigger: AGTACAAACCTCCCAGTTCTCCCTCTCAGAGGTGCAAAGTCTACACCCAGAAGGGGGTCCTGCCCTCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp GCCTCCAGGTACTCCAGGGAATCCAGCTGCAGGACCTaGTCCAAGTCAAATTCACGAAGCCACTTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: ASRYSRESSCRT*SKSNSRSHLLG
Trigger: CCCCAACAAGTGGCTTCGTGAATTTGACTTGGAGCAGGTCCTGCAGCTGGATTCCCTGGAGTACCTGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp CTTGACTTTAGGTTTCGGTTGACATGGAGGGGACTTTaGGCCACCAAGCCAGGCAGGGCCATCTCACAGCCA +
Preference number: 6 (lower is better)
Translates to: LDFRFRLTWRGL*ATKPGRAISQP
Trigger: TGGCTGTGAGATGGCCCTGCCTGGCTTGGTGGCCCAAAGTCCCCTCCATGTCAACCGAAACCTAAAGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp TCGCTGCCAGCTGCCTGCTCCAAGGTCAGCACCATTTaGATGGCTTCCTGCTTTAGCTGGTTCAGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: SLPAACSKVSTI*MASCFSWFRCV
Trigger: CACACACCTGAACCAGCTAAAGCAGGAAGCCATCCAAATGGTGCTGACCTTGGAGCAGGCAGCTGGCAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CAA 72 bp ACCATGGCCTTGCCCACCGTTGAGATTTTGCAGCCTTaGATGGGAGCGGCTTTGTTGCCAGACTCTTCCCCC +
Preference number: 6 (lower is better)
Translates to: TMALPTVEILQP*MGAALLPDSSP
Trigger: GGGGGAAGAGTCTGGCAACAAAGCCGCTCCCATCAAAGGCTGCAAAATCTCAACGGTGGGCAAGGCCATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp AATGCCCTTGGGAGGCTGCTTGACTTTAGGTTTCGGTaGACATGGAGGGGACTTTGGGCCACCAAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: NALGRLLDFRFR*TWRGLWATKPG
Trigger: GCCTGGCTTGGTGGCCCAAAGTCCCCTCCATGTCAACCGAAACCTAAAGTCAAGCAGCCTCCCAAGGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp TCACGAAGCCACTTGTTGGGGTCCAGCATCAGGTACTaGTTGGTCGCTTCTAGCTCCTTCATCAGCCACTCG +
Preference number: 6 (lower is better)
Translates to: SRSHLLGSSIRY*LVASSSFISHS
Trigger: CGAGTGGCTGATGAAGGAGCTAGAAGCGACCAAGCAGTACCTGATGCTGGACCCCAACAAGTGGCTTCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp TTCATCTCTCTCCTTGTACTGGGTTCCTTGCTTTCCTaGGCCTGGGATGCTTTGGGGCTCACCTTTGGGGTG +
Preference number: 6 (lower is better)
Translates to: FISLLVLGSLLS*AWDALGLTFGV
Trigger: CACCCCAAAGGTGAGCCCCAAAGCATCCCAGGCCCAGGAAAGCAAGGAACCCAGTACAAGGAGAGAGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp AGCATGGTGAGCTTGCTCTCCTTGTATGGGATGTGCTaGCTCCCGTTGACCAAAGCCAGGATGACGTTGCCC +
Preference number: 6 (lower is better)
Translates to: SMVSLLSLYGMC*LPLTKARMTLP
Trigger: GGGCAACGTCATCCTGGCTTTGGTCAACGGGAGCAAGCACATCCCATACAAGGAGAGCAAGCTCACCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp GAGATGGTGACCATGGCCTTGCCCACCGTTGAGATTTaGCAGCCTTTGATGGGAGCGGCTTTGTTGCCAGAC +
Preference number: 6 (lower is better)
Translates to: EMVTMALPTVEI*QPLMGAALLPD
Trigger: GTCTGGCAACAAAGCCGCTCCCATCAAAGGCTGCAAAATCTCAACGGTGGGCAAGGCCATGGTCACCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp CCAAGAGAGTTGCTTCTGCTGGCCAGCTGTTCCAGCTaGGCGCTGAAGAGCTTACTGCTGCTACTGACATCC +
Preference number: 6 (lower is better)
Translates to: PRELLLLASCSS*ALKSLLLLLTS
Trigger: GGATGTCAGTAGCAGCAGTAAGCTCTTCAGCGCCAAGCTGGAACAGCTGGCCAGCAGAAGCAACTCTCTTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp CGAAGCCACTTGTTGGGGTCCAGCATCAGGTACTGCTaGGTCGCTTCTAGCTCCTTCATCAGCCACTCGTAC +
Preference number: 6 (lower is better)
Translates to: RSHLLGSSIRYC*VASSSFISHSY
Trigger: GTACGAGTGGCTGATGAAGGAGCTAGAAGCGACCAAGCAGTACCTGATGCTGGACCCCAACAAGTGGCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp CTCTTCTTTTCCGCTCCGTTGCTGACCCCAAGGCTGTaGGGTTTGCCGCTGTGTTTGTTGACAAGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: LFFSAPLLTPRL*GLPLCLLTRPV
Trigger: CACAGGCCTTGTCAACAAACACAGCGGCAAACCCAACAGCCTTGGGGTCAGCAACGGAGCGGAAAAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CAA 90 bp GAGATGGTGACCATGGCCTTGCCCACCGTTGAGATTTTGCAGCCTTaGATGGGAGCGGCTTTGTTGCCAGACTCTTCCCCCATCTCAGAT +
Preference number: 6 (lower is better)
Translates to: EMVTMALPTVEILQP*MGAALLPDSSPISD
Trigger: ATCTGAGATGGGGGAAGAGTCTGGCAACAAAGCCGCTCCCATCAAAGGCTGCAAAATCTCAACGGTGGGCAAGGCCATGGTCACCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp TCCAGCTGCAGGACCTGCTCCAAGTCAAATTCACGAAGCCACTTGTaGGGGTCCAGCATCAGGTACTGCTTGGTCGCTTCTAGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SSCRTCSKSNSRSHL*GSSIRYCLVASSSF
Trigger: GAAGGAGCTAGAAGCGACCAAGCAGTACCTGATGCTGGACCCCAACAAGTGGCTTCGTGAATTTGACTTGGAGCAGGTCCTGCAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp TCACAGGTGAGGGGGTATCGAGAGACAGTGCTGGAATaGGCCTCCGTCTCTGGGAACCTGAATTGGACCTTT +
Preference number: 6 (lower is better)
Translates to: SQVRGYRETVLE*ASVSGNLNWTF
Trigger: AAAGGTCCAATTCAGGTTCCCAGAGACGGAGGCTCATTCCAGCACTGTCTCTCGATACCCCCTCACCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp TGGTGGGCGAGCACATTTCGTTCACCCCGTATTTCTTaGCCCTGGTGGAGACCGCAAGCCTCTCTTTATTTC +
Preference number: 6 (lower is better)
Translates to: WWASTFRSPRIS*PWWRPQASLYF
Trigger: GAAATAAAGAGAGGCTTGCGGTCTCCACCAGGGGCAAGAAATACGGGGTGAACGAAATGTGCTCGCCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CCA 72 bp CTCCCTCAGAAGCATGGTGAGCTTGCTCTCCTTGTATaGGATGTGCTTGCTCCCGTTGACCAAAGCCAGGAT +
Preference number: 6 (lower is better)
Translates to: LPQKHGELALLV*DVLAPVDQSQD
Trigger: ATCCTGGCTTTGGTCAACGGGAGCAAGCACATCCCATACAAGGAGAGCAAGCTCACCATGCTTCTGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp GAAGCCACTTGTTGGGGTCCAGCATCAGGTACTGCTTaGTCGCTTCTAGCTCCTTCATCAGCCACTCGTACT +
Preference number: 6 (lower is better)
Translates to: EATCWGPASGTA*SLLAPSSATRT
Trigger: AGTACGAGTGGCTGATGAAGGAGCTAGAAGCGACCAAGCAGTACCTGATGCTGGACCCCAACAAGTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp AGCACATTTCGTTCACCCCGTATTTCTTGCCCCTGGTaGAGACCGCAAGCCTCTCTTTATTTCCGGCTACCG +
Preference number: 6 (lower is better)
Translates to: STFRSPRISCPW*RPQASLYFRLP
Trigger: CGGTAGCCGGAAATAAAGAGAGGCTTGCGGTCTCCACCAGGGGCAAGAAATACGGGGTGAACGAAATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CAA 72 bp TTGGTCGCTTCTAGCTCCTTCATCAGCCACTCGTACTaGGCTCGGACTTCAGCGATTCTCTGCTGCCGATGT +
Preference number: 6 (lower is better)
Translates to: LVASSSFISHSY*ARTSAILCCRC
Trigger: ACATCGGCAGCAGAGAATCGCTGAAGTCCGAGCCAAGTACGAGTGGCTGATGAAGGAGCTAGAAGCGACCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp TGCAGGACCTGCTCCAAGTCAAATTCACGAAGCCACTaGTTGGGGTCCAGCATCAGGTACTGCTTGGTCGCT +
Preference number: 6 (lower is better)
Translates to: CRTCSKSNSRSH*LGSSIRYCLVA
Trigger: AGCGACCAAGCAGTACCTGATGCTGGACCCCAACAAGTGGCTTCGTGAATTTGACTTGGAGCAGGTCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp GCCTTGCCCACCGTTGAGATTTTGCAGCCTTTGATGGGAGCGGCTTaGTTGCCAGACTCTTCCCCCATCTCAGATAAGATGAGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: ALPTVEILQPLMGAA*LPDSSPISDKMSRL
Trigger: CAACCTGCTCATCTTATCTGAGATGGGGGAAGAGTCTGGCAACAAAGCCGCTCCCATCAAAGGCTGCAAAATCTCAACGGTGGGCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp GCGCTGAAGAGCTTACTGCTGCTACTGACATCCTTAGTCTTGCCGTaGGACTCATCAGGGAAGCAAGCCAAGAAGGTAGCTGGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: ALKSLLLLLTSLVLP*DSSGKQAKKVAGWF
Trigger: GAACCAGCCAGCTACCTTCTTGGCTTGCTTCCCTGATGAGTCCAACGGCAAGACTAAGGATGTCAGTAGCAGCAGTAAGCTCTTCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp AGCTTGGCGCTGAAGAGCTTACTGCTGCTACTGACATCCTTAGTCTaGCCGTTGGACTCATCAGGGAAGCAAGCCAAGAAGGTAGCTGGC +
Preference number: 6 (lower is better)
Translates to: SLALKSLLLLLTSLV*PLDSSGKQAKKVAG
Trigger: GCCAGCTACCTTCTTGGCTTGCTTCCCTGATGAGTCCAACGGCAAGACTAAGGATGTCAGTAGCAGCAGTAAGCTCTTCAGCGCCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp TCAAATTCACGAAGCCACTTGTTGGGGTCCAGCATCAGGTACTGCTaGGTCGCTTCTAGCTCCTTCATCAGCCACTCGTACTTGGCTCGG +
Preference number: 6 (lower is better)
Translates to: SNSRSHLLGSSIRYC*VASSSFISHSYLAR
Trigger: CCGAGCCAAGTACGAGTGGCTGATGAAGGAGCTAGAAGCGACCAAGCAGTACCTGATGCTGGACCCCAACAAGTGGCTTCGTGAATTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp TGTGTTGGAGATGGTGACCATGGCCTTGCCCACCGTTaGGATTTTGCAGCCTTTGATGGGAGCGGCTTTGTT +
Preference number: 6 (lower is better)
Translates to: CVGDGDHGLAHR*DFAAFDGSGFV
Trigger: AACAAAGCCGCTCCCATCAAAGGCTGCAAAATCTCAACGGTGGGCAAGGCCATGGTCACCATCTCCAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp AGAAGCATGGTGAGCTTGCTCTCCTTGTATGGGATGTaGTTGCTCCCGTTGACCAAAGCCAGGATGACGTTG +
Preference number: 6 (lower is better)
Translates to: RSMVSLLSLYGM*LLPLTKARMTL
Trigger: CAACGTCATCCTGGCTTTGGTCAACGGGAGCAAGCACATCCCATACAAGGAGAGCAAGCTCACCATGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp TCTGGGTGTAGACTTTGCACCTCTGAGAGGGAGAACTaGGAGGTTTGTACTCTGAGGTCTTGGACAGACTGG +
Preference number: 6 (lower is better)
Translates to: SGCRLCTSEREN*EVCTLRSWTDW
Trigger: CCAGTCTGTCCAAGACCTCAGAGTACAAACCTCCCAGTTCTCCCTCTCAGAGGTGCAAAGTCTACACCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp CTAGAGTTCCGGGAAACCCTTCGCTCCCGGCAGACATaGATTTCTTCAAAACCTGGGGACTCATTCCAACTG +
Preference number: 6 (lower is better)
Translates to: LEFRETLRSRQT*ISSKPGDSFQL
Trigger: CAGTTGGAATGAGTCCCCAGGTTTTGAAGAAATCCATGTCTGCCGGGAGCGAAGGGTTTCCCGGAACTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp AGGACCTGCTCCAAGTCAAATTCACGAAGCCACTTGTaGGGGTCCAGCATCAGGTACTGCTTGGTCGCTTCT +
Preference number: 6 (lower is better)
Translates to: RTCSKSNSRSHL*GSSIRYCLVAS
Trigger: AGAAGCGACCAAGCAGTACCTGATGCTGGACCCCAACAAGTGGCTTCGTGAATTTGACTTGGAGCAGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp TTGGTGGGCGAGCACATTTCGTTCACCCCGTATTTCTaGCCCCTGGTGGAGACCGCAAGCCTCTCTTTATTT +
Preference number: 6 (lower is better)
Translates to: LVGEHISFTPYF*PLVETASLSLF
Trigger: AAATAAAGAGAGGCTTGCGGTCTCCACCAGGGGCAAGAAATACGGGGTGAACGAAATGTGCTCGCCCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CAA 90 bp TCAGCGATTCTCTGCTGCCGATGTTCTAGGATTTTCAGCTTGGCATaGAAGCACATGACCTCCTTGCTTGTAGCTCCTCGACGTCGCTGC +
Preference number: 6 (lower is better)
Translates to: SAILCCRCSRIFSLA*KHMTSLLVAPRRRC
Trigger: GCAGCGACGTCGAGGAGCTACAAGCAAGGAGGTCATGTGCTTCAATGCCAAGCTGAAAATCCTAGAACATCGGCAGCAGAGAATCGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp AGGTACTGCTTGGTCGCTTCTAGCTCCTTCATCAGCCACTCGTACTaGGCTCGGACTTCAGCGATTCTCTGCTGCCGATGTTCTAGGATT +
Preference number: 6 (lower is better)
Translates to: RYCLVASSSFISHSY*ARTSAILCCRCSRI
Trigger: AATCCTAGAACATCGGCAGCAGAGAATCGCTGAAGTCCGAGCCAAGTACGAGTGGCTGATGAAGGAGCTAGAAGCGACCAAGCAGTACCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp TCAACGGCTGAGATGCGGACTGAGAATCGGGCCCCCGTCTTCTCTTaGCGCTCATTGATAAGCTTGAACAGCCAAGAAATAGCACATGGA +
Preference number: 6 (lower is better)
Translates to: STAEMRTENRAPVFS*RSLISLNSQEIAHG
Trigger: TCCATGTGCTATTTCTTGGCTGTTCAAGCTTATCAATGAGCGCAAAGAGAAGACGGGGGCCCGATTCTCAGTCCGCATCTCAGCCGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp TTGCCCACCGTTGAGATTTTGCAGCCTTTGATGGGAGCGGCTTTGTaGCCAGACTCTTCCCCCATCTCAGATAAGATGAGCAGGTTGTCA +
Preference number: 6 (lower is better)
Translates to: LPTVEILQPLMGAAL*PDSSPISDKMSRLS
Trigger: TGACAACCTGCTCATCTTATCTGAGATGGGGGAAGAGTCTGGCAACAAAGCCGCTCCCATCAAAGGCTGCAAAATCTCAACGGTGGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp CGGACTTCAGCGATTCTCTGCTGCCGATGTTCTAGGATTTTCAGCTaGGCATTGAAGCACATGACCTCCTTGCTTGTAGCTCCTCGACGT +
Preference number: 6 (lower is better)
Translates to: RTSAILCCRCSRIFS*ALKHMTSLLVAPRR
Trigger: ACGTCGAGGAGCTACAAGCAAGGAGGTCATGTGCTTCAATGCCAAGCTGAAAATCCTAGAACATCGGCAGCAGAGAATCGCTGAAGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp CTCTGTGCCTTCCCTCTCGGTCAATTGGCCATTGTCTaGGCCGTTATCTTCCTTTTCAGACTCAGAGGGTGT +
Preference number: 6 (lower is better)
Translates to: LCAFPLGQLAIV*AVIFLFRLRGC
Trigger: ACACCCTCTGAGTCTGAAAAGGAAGATAACGGCTCAGACAATGGCCAATTGACCGAGAGGGAAGGCACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp GACTTCCTGATAGTATTGGGAACCTGGAGTTTGTCGTaGATCACAGCAGAGAAAGCAGGGTCCTTTCCCGGG +
Preference number: 6 (lower is better)
Translates to: DFLIVLGTWSLS*ITAEKAGSFPG
Trigger: CCCGGGAAAGGACCCTGCTTTCTCTGCTGTGATTCACGACAAACTCCAGGTTCCCAATACTATCAGGAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS TCA 72 bp CGTCTAGATATTGATGAGCCTGAATGGCCACCGAGTTaGGGATGTTTCCATTGCTGGGACTGGTGGCCATCT +
Preference number: 6 (lower is better)
Translates to: RLDIDEPEWPPS*GCFHCWDWWPS
Trigger: AGATGGCCACCAGTCCCAGCAATGGAAACATCCTCAACTCGGTGGCCATTCAGGCTCATCAATATCTAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS TCA 72 bp AGGTATCTCGAGCTGATGTGGAACAGATACGCAGCATaGCTTTCACCTTGCCCATGCCAGGAGTGTCCTTCA +
Preference number: 6 (lower is better)
Translates to: RYLELMWNRYAA*LSPCPCQECPS
Trigger: TGAAGGACACTCCTGGCATGGGCAAGGTGAAAGTCATGCTGCGTATCTGTTCCACATCAGCTCGAGATACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS GCA 72 bp CAGCATCGAAGGCAAACATCTTCGGAGGAACCTGGCTaGTTCTTTTCTGGAAGGCATTTTGACCTCCGCAAG +
Preference number: 6 (lower is better)
Translates to: QHRRQTSSEEPG*FFSGRHFDLRK
Trigger: CTTGCGGAGGTCAAAATGCCTTCCAGAAAAGAAGCAGCCAGGTTCCTCCGAAGATGTTTGCCTTCGATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp AGCCACTCGTACTTGGCTCGGACTTCAGCGATTCTCTaGTGCCGATGTTCTAGGATTTTCAGCTTGGCATTG +
Preference number: 6 (lower is better)
Translates to: SHSYLARTSAIL*CRCSRIFSLAL
Trigger: CAATGCCAAGCTGAAAATCCTAGAACATCGGCAGCAGAGAATCGCTGAAGTCCGAGCCAAGTACGAGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp TTTGGATGGCTTCCTGCTTTAGCTGGTTCAGGTGTGTaGCACAAATGTCACAGCGGTTGTCTCGGTCATTCC +
Preference number: 6 (lower is better)
Translates to: FGWLPALAGSGV*HKCHSGCLGHS
Trigger: GGAATGACCGAGACAACCGCTGTGACATTTGTGCCACACACCTGAACCAGCTAAAGCAGGAAGCCATCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161017.8
CDS CAA 72 bp CGGAGGAACCTGGCTGCTTCTTTTCTGGAAGGCATTTaGACCTCCGCAAGTCAGGGGATCATACAAGGTGAT +
Preference number: 6 (lower is better)
Translates to: RRNLAASFLEGI*TSASQGIIQGD
Trigger: ATCACCTTGTATGATCCCCTGACTTGCGGAGGTCAAAATGCCTTCCAGAAAAGAAGCAGCCAGGTTCCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp GGAAGCTCTGTGCCTTCCCTCTCGGTCAATTGGCCATaGTCTGAGCCGTTATCTTCCTTTTCAGACTCAGAG +
Preference number: 6 (lower is better)
Translates to: GSSVPSLSVNWP*SEPLSSFSDSE
Trigger: CTCTGAGTCTGAAAAGGAAGATAACGGCTCAGACAATGGCCAATTGACCGAGAGGGAAGGCACAGAGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp GAGATGCGGACTGAGAATCGGGCCCCCGTCTTCTCTTTGCGCTCATaGATAAGCTTGAACAGCCAAGAAATAGCACATGGAATAATGCCC +
Preference number: 6 (lower is better)
Translates to: EMRTENRAPVFSLRS*ISLNSQEIAHGIMP
Trigger: GGGCATTATTCCATGTGCTATTTCTTGGCTGTTCAAGCTTATCAATGAGCGCAAAGAGAAGACGGGGGCCCGATTCTCAGTCCGCATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS TCA 72 bp ATGACTTCGGCCACAGTTCCAGCACAAACTTCAGCCTaGGAAGCATCTTGTGGGAAAACAGCATCGAAGGCA +
Preference number: 6 (lower is better)
Translates to: MTSATVPAQTSA*EASCGKTASKA
Trigger: TGCCTTCGATGCTGTTTTCCCACAAGATGCTTCTCAGGCTGAAGTTTGTGCTGGAACTGTGGCCGAAGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp GCAGCTCTTCGAAGGGAAACTTACTGGGTTCTTCGCTaGCATCTATGCAATCTAGTCTTTCCTGCAGCTCAG +
Preference number: 6 (lower is better)
Translates to: AALRRETYWVLR*HLCNLVFPAAQ
Trigger: CTGAGCTGCAGGAAAGACTAGATTGCATAGATGGCAGCGAAGAACCCAGTAAGTTTCCCTTCGAAGAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp CACTCGTACTTGGCTCGGACTTCAGCGATTCTCTGCTaGCGATGTTCTAGGATTTTCAGCTTGGCATTGAAG +
Preference number: 6 (lower is better)
Translates to: HSYLARTSAILC*RCSRIFSLALK
Trigger: CTTCAATGCCAAGCTGAAAATCCTAGAACATCGGCAGCAGAGAATCGCTGAAGTCCGAGCCAAGTACGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp CGGGCCCCCGTCTTCTCTTTGCGCTCATTGATAAGCTaGAACAGCCAAGAAATAGCACATGGAATAATGCCC +
Preference number: 6 (lower is better)
Translates to: RAPVFSLRSLIS*NSQEIAHGIMP
Trigger: GGGCATTATTCCATGTGCTATTTCTTGGCTGTTCAAGCTTATCAATGAGCGCAAAGAGAAGACGGGGGCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp GAGATGCGGACTGAGAATCGGGCCCCCGTCTTCTCTTaGCGCTCATTGATAAGCTTGAACAGCCAAGAAATA +
Preference number: 6 (lower is better)
Translates to: EMRTENRAPVFS*RSLISLNSQEI
Trigger: TATTTCTTGGCTGTTCAAGCTTATCAATGAGCGCAAAGAGAAGACGGGGGCCCGATTCTCAGTCCGCATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp GTTGAGATTTTGCAGCCTTTGATGGGAGCGGCTTTGTaGCCAGACTCTTCCCCCATCTCAGATAAGATGAGC +
Preference number: 6 (lower is better)
Translates to: VEILQPLMGAAL*PDSSPISDKMS
Trigger: GCTCATCTTATCTGAGATGGGGGAAGAGTCTGGCAACAAAGCCGCTCCCATCAAAGGCTGCAAAATCTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp ACCGTTGAGATTTTGCAGCCTTTGATGGGAGCGGCTTaGTTGCCAGACTCTTCCCCCATCTCAGATAAGATG +
Preference number: 6 (lower is better)
Translates to: TVEILQPLMGAA*LPDSSPISDKM
Trigger: CATCTTATCTGAGATGGGGGAAGAGTCTGGCAACAAAGCCGCTCCCATCAAAGGCTGCAAAATCTCAACGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp AGCTTACTGCTGCTACTGACATCCTTAGTCTTGCCGTaGGACTCATCAGGGAAGCAAGCCAAGAAGGTAGCT +
Preference number: 6 (lower is better)
Translates to: SLLLLLTSLVLP*DSSGKQAKKVA
Trigger: AGCTACCTTCTTGGCTTGCTTCCCTGATGAGTCCAACGGCAAGACTAAGGATGTCAGTAGCAGCAGTAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp CTGAAGAGCTTACTGCTGCTACTGACATCCTTAGTCTaGCCGTTGGACTCATCAGGGAAGCAAGCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: LKSLLLLLTSLV*PLDSSGKQAKK
Trigger: CTTCTTGGCTTGCTTCCCTGATGAGTCCAACGGCAAGACTAAGGATGTCAGTAGCAGCAGTAAGCTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp CTCTGCTGCCGATGTTCTAGGATTTTCAGCTTGGCATaGAAGCACATGACCTCCTTGCTTGTAGCTCCTCGA +
Preference number: 6 (lower is better)
Translates to: LCCRCSRIFSLA*KHMTSLLVAPR
Trigger: TCGAGGAGCTACAAGCAAGGAGGTCATGTGCTTCAATGCCAAGCTGAAAATCCTAGAACATCGGCAGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp TGCAATCTAGTCTTTCCTGCAGCTCAGCAAACGTATTaGACTTCAGACAGTCCCTTTCTGACTTGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: CNLVFPAAQQTY*TSDSPFLTCWL
Trigger: CAGCCAGCAAGTCAGAAAGGGACTGTCTGAAGTGCAATACGTTTGCTGAGCTGCAGGAAAGACTAGATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS GCA 72 bp GGTTCTTCGCTGCCATCTATGCAATCTAGTCTTTCCTaGAGCTCAGCAAACGTATTGCACTTCAGACAGTCC +
Preference number: 6 (lower is better)
Translates to: GSSLPSMQSSLS*SSANVLHFRQS
Trigger: GGACTGTCTGAAGTGCAATACGTTTGCTGAGCTGCAGGAAAGACTAGATTGCATAGATGGCAGCGAAGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp CGAACTGGATGGGCAGCTCTTCGAAGGGAAACTTACTaGGTTCTTCGCTGCCATCTATGCAATCTAGTCTTT +
Preference number: 6 (lower is better)
Translates to: RTGWAALRRETY*VLRCHLCNLVF
Trigger: AAAGACTAGATTGCATAGATGGCAGCGAAGAACCCAGTAAGTTTCCCTTCGAAGAGCTGCCCATCCAGTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp ACTGAGAATCGGGCCCCCGTCTTCTCTTTGCGCTCATaGATAAGCTTGAACAGCCAAGAAATAGCACATGGA +
Preference number: 6 (lower is better)
Translates to: TENRAPVFSLRS*ISLNSQEIAHG
Trigger: TCCATGTGCTATTTCTTGGCTGTTCAAGCTTATCAATGAGCGCAAAGAGAAGACGGGGGCCCGATTCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp TGCCTTCCTCACAGGAGCTTTCTCCCCCAGAGGAGCTaGATGTGTACTTGGTCTTCTTCTTCTTCATCCTTA +
Preference number: 6 (lower is better)
Translates to: CLPHRSFLPQRS*MCTWSSSSSSL
Trigger: TAAGGATGAAGAAGAAGAAGACCAAGTACACATCAAGCTCCTCTGGGGGAGAAAGCTCCTGTGAGGAAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp GCGATTCTCTGCTGCCGATGTTCTAGGATTTTCAGCTaGGCATTGAAGCACATGACCTCCTTGCTTGTAGCT +
Preference number: 6 (lower is better)
Translates to: AILCCRCSRIFS*ALKHMTSLLVA
Trigger: AGCTACAAGCAAGGAGGTCATGTGCTTCAATGCCAAGCTGAAAATCCTAGAACATCGGCAGCAGAGAATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 90 bp AAACATCTTCGGAGGAACCTGGCTGCTTCTTTTCTGGAAGGCATTTaGACCTCCGCAAGTCAGGGGATCATACAAGGTGATCTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: KHLRRNLAASFLEGI*TSASQGIIQGDLLL
Trigger: AAGAAGCAGATCACCTTGTATGATCCCCTGACTTGCGGAGGTCAAAATGCCTTCCAGAAAAGAAGCAGCCAGGTTCCTCCGAAGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CAA 72 bp ATGCAATCTAGTCTTTCCTGCAGCTCAGCAAACGTATaGCACTTCAGACAGTCCCTTTCTGACTTGCTGGCT +
Preference number: 6 (lower is better)
Translates to: MQSSLSCSSANV*HFRQSLSDLLA
Trigger: AGCCAGCAAGTCAGAAAGGGACTGTCTGAAGTGCAATACGTTTGCTGAGCTGCAGGAAAGACTAGATTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8
CDS CCA 72 bp CTCATTGATAAGCTTGAACAGCCAAGAAATAGCACATaGAATAATGCCCAGGTTCTGCATAGAGTCGTCCCT +
Preference number: 6 (lower is better)
Translates to: LIDKLEQPRNST*NNAQVLHRVVP
Trigger: AGGGACGACTCTATGCAGAACCTGGGCATTATTCCATGTGCTATTTCTTGGCTGTTCAAGCTTATCAATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160789.2
ENSMUST00000161017.8