Pregenerated sensors for KIF23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032254Ensembl transcript IDs: ENSMUST00000034815.9, ENSMUST00000214295.2
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAACGTCTGGAACAGCTTTaGATAAATCACCAACACGAG | + |
|
Preference number: 2 (lower is better) Translates to: KYLPKMVSPLASRHLYYERLEQL*INHQHE Trigger: CTCGTGTTGGTGATTTATCCAAAGCTGTTCCAGACG...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| 3UTR-3UTR CCA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAAGGGCAACGTGATCTaGATACATTCTTCTGCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: KYLPKMVSPLASRHLYYEKGNVI*IHSSAR Trigger: TCTTGCAGAAGAATGTATCCAGATCACGTTGCCCTT...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| 3UTR-3UTR GCA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCTGGATACATTCTTCTaGAAGATGACTCAGACACTG | + |
|
Preference number: 2 (lower is better) Translates to: IYIQNSKYLPKMVSPLASLDTFF*KMTQTL Trigger: CAGTGTCTGAGTCATCTTGCAGAAGAATGTATCCAG...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| 3UTR-3UTR CAA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAGCGTCTGGAACAGCTTaGGATAAATCACCAACACGA | + |
|
Preference number: 3 (lower is better) Translates to: KYLPKMVSPLASRHLYYEASGTA*DKSPTR Trigger: TCGTGTTGGTGATTTATCCAAAGCTGTTCCAGACGC...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| 3UTR CCA 72 bp | AAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTaGCCAGTCGCCATCTTTATTATGAAAGTCTTAATT | + |
|
Preference number: 3 (lower is better) Translates to: KTLNTFLKWFHH*PVAIFIMKVLI Trigger: AATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATGCATCTCTAGCTGGGTaGCTGCCACCCGACGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSKYLPKMVSPLASRHLYASLAG*LPPDAH Trigger: GTGAGCGTCGGGTGGCAGCCACCCAGCTAGAGATGC...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | ATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTGTGTAGCTGCGGCTaGCTCATGAGTTGCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IQNSKYLPKMVSPLASRHLCSCG*LMSCWP Trigger: CGGCCAGCAACTCATGAGCCAGCCGCAGCTACACAG...ATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAGCTGCGGCTGGCTCATaGGTTGCTGGCCGTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KYLPKMVSPLASRHLYYEAAAGS*VAGRWK Trigger: TTTCCAACGGCCAGCAACTCATGAGCCAGCCGCAGC...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | ATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATGGGCAGGTGCTAGGGTaGACGATCTTCGTTTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: IQNSKYLPKMVSPLASRHGQVLG*TIFVSD Trigger: GTCGGAAACGAAGATCGTCCACCCTAGCACCTGCCC...ATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAAGACACTGTGATGGCGTaGGGGACATGCGGCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKDTVMA*GTCGCI Trigger: GATGCAGCCGCATGTCCCTCACGCCATCACAGTGTC...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | ATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATTTGCAACAGACACTGTaGTGGCGTGAGGGACATGCG | + |
|
Preference number: 4 (lower is better) Translates to: IQNSKYLPKMVSPLASRHLQQTL*WREGHA Trigger: CGCATGTCCCTCACGCCATCACAGTGTCTGTTGCAA...ATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAATGGGGACCATCTCCCTaGCTTCAGTCCAGCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: KYLPKMVSPLASRHLYYEWGPSP*LQSSTC Trigger: GCATGTGCTGGACTGAAGGCAGGGAGATGGTCCCCA...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | ATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATTATGATCTACCCATCTaGTCCCTGCAGAGCGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: IQNSKYLPKMVSPLASRHYDLPI*SLQSGT Trigger: GGTCCCGCTCTGCAGGGAGCAGATGGGTAGATCATA...ATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATCAGGCCTCCAGACCCTaGAGACCCTGTCATTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NSKYLPKMVSPLASRHLYQASRP*RPCHCV Trigger: TACACAATGACAGGGTCTCCAGGGTCTGGAGGCCTG...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAACCGGGAGGGTCTCTCTaGCTTCTCAGGTTTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KYLPKMVSPLASRHLYYEPGGSL*LLRFGF Trigger: GAACCCAAACCTGAGAAGCCAGAGAGACCCTCCCGG...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAAGAGCGTCTGTGTAGCTaGGGCTGGCTCATGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKERLCS*GWLMSC Trigger: GCAACTCATGAGCCAGCCGCAGCTACACAGACGCTC...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATCTGCTGCCTATGCCTTaGAAGGGAGGTGACATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NSKYLPKMVSPLASRHLYLLPMP*KGGDID Trigger: GTCAATGTCACCTCCCTTGCAAGGCATAGGCAGCAG...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | ATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTCAGTCCAGCACATaGCTCGCCTTCTGTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: IQNSKYLPKMVSPLASRHLQSST*LAFCLT Trigger: TGTCAGACAGAAGGCGAGGCATGTGCTGGACTGAAG...ATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAACTTGCGCTTGGGTTGTaGGTGGTGCTGATATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKLALGL*VVLISR Trigger: CCGGGATATCAGCACCACGCACAACCCAAGCGCAAG...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | AAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTTCCACACAGCATTCTTaGTCAGGAAAGCTCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KTLNTFLKWFHHWPVAIFSTQHS*SGKLRG Trigger: CCCCCTGAGCTTTCCTGACCAAGAATGCTGTGTGGA...AAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATGCCTCGCCTTCTGTCTaGCACGATACACGTTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: NSKYLPKMVSPLASRHLYASPSV*HDTRFT Trigger: AGTAAAACGTGTATCGTGTCAGACAGAAGGCGAGGC...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTGCAAACTCTGGATCTaGTTGTCGCTTGCTAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSKYLPKMVSPLASRHLYCKLWI*LSLARG Trigger: CCCTCTAGCAAGCGACAAGCAGATCCAGAGTTTGCA...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | AAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTCTTGTCCACTGGTCTTaGCACTTCCACTTCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KTLNTFLKWFHHWPVAIFLVHWS*HFHFLG Trigger: ACCCAAGAAGTGGAAGTGGCAAGACCAGTGGACAAG...AAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTGGCTCCTGCTGCCTATaGCTTGCAAGGGAGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: IYIQNSKYLPKMVSPLASGSCCL*LAREVT Trigger: TGTCACCTCCCTTGCAAGGCATAGGCAGCAGGAGCC...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTTGTCCTGGCTCCTGCTaGCTATGCCTTGCAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IYIQNSKYLPKMVSPLASCPGSC*LCLARE Trigger: CTCCCTTGCAAGGCATAGGCAGCAGGAGCCAGGACA...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTTACCCATCTGCTCCCTaGAGAGCGGGACCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IYIQNSKYLPKMVSPLASYPSAP*RAGPSV Trigger: CACAGAAGGTCCCGCTCTGCAGGGAGCAGATGGGTA...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | ATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATTCCCAGCTGAGATCCTaGTCTCATTTCAACGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IQNSKYLPKMVSPLASRHSQLRS*SHFNGN Trigger: GTTGCCGTTGAAATGAGAGCAGGATCTCAGCTGGGA...ATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATCCATGCCTTGCAACCTaGCTTCTAATCTGCGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSKYLPKMVSPLASRHLYPCLAT*LLICAC Trigger: ACAAGCGCAGATTAGAAGCCAGGTTGCAAGGCATGG...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAGTGTTCCTGCGGCAATaGTCCTCTTCTACGCCTATC | + |
|
Preference number: 4 (lower is better) Translates to: KYLPKMVSPLASRHLYYEVFLRQ*SSSTPI Trigger: GATAGGCGTAGAAGAGGACCATTGCCGCAGGAACAC...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAATCGGAGGCTAGTTCCTaGTGGGTCAGCATGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KYLPKMVSPLASRHLYYESEASS*WVSMYF Trigger: GAAGTACATGCTGACCCACCAGGAACTAGCCTCCGA...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAAAGTCCCCATTTCTGTTaGGTCGATAGCCCTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKSPHFC*VDSPQE Trigger: CTCCTGAGGGCTATCGACTCAACAGAAATGGGGACT...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTTCCTTCTGGGTGGTGTaGGTGCCAAATACCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IYIQNSKYLPKMVSPLASSFWVV*VPNTRL Trigger: CAAGCGGGTATTTGGCACTCACACCACCCAGAAGGA...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | AAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTGCTGAACACGCTATGTaGACGACTGGACTCTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: KTLNTFLKWFHHWPVAIFAEHAM*TTGLSI Trigger: AATAGAGAGTCCAGTCGTTCACATAGCGTGTTCAGC...AAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAATATCCCGGTCCCAGCTaGGATCCTGCTCTCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKYPGPS*DPALIS Trigger: TGAAATGAGAGCAGGATCTCAGCTGGGACCGGGATA...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATACCTGGCTTCTAATCTaGGCTTGTCAGAAAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSKYLPKMVSPLASRHLYTWLLI*ACQKTA Trigger: GGCAGTTTTCTGACAAGCGCAGATTAGAAGCCAGGT...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATAAAGTTCCTTCTGGGTaGTGTGAGTGCCAAATACCC | + |
|
Preference number: 4 (lower is better) Translates to: NSKYLPKMVSPLASRHLYKVPSG*CECQIP Trigger: GGGTATTTGGCACTCACACCACCCAGAAGGAACTTT...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | AAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTAGGGGGTCTTTGGAATaGGCAAGGCTTCTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTLNTFLKWFHHWPVAIFRGSLE*ARLLFS Trigger: AGAAAAGAGAAGCCTTGCCCATTCCAAAGACCCCCT...AAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTTCTGTACCATCTGGTTaGGCAGGTGCTAGGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IYIQNSKYLPKMVSPLASSVPSG*AGARVD Trigger: GTCCACCCTAGCACCTGCCCAACCAGATGGTACAGA...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATAGACCATTCTTGCCATaGATGAGGTCATCTACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSKYLPKMVSPLASRHLYRPFLP*MRSSTK Trigger: CTTGGTAGATGACCTCATTCATGGCAAGAATGGTCT...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATGGGTCTCCTCATCATTaGTATCCAAAAGCTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: NSKYLPKMVSPLASRHLYGSPHH*YPKACM Trigger: CATGCAAGCTTTTGGATATCAATGATGAGGAGACCC...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | ATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATTTAATGACTTTAGTCTaGATCTCCCCATCGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQNSKYLPKMVSPLASRHLMTLV*ISPSEA Trigger: AGCCTCCGATGGGGAGATTCAGACTAAAGTCATTAA...ATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | ATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATAAGGCTTCTCTTTTCTaGCGTTCTAACAAGGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: IQNSKYLPKMVSPLASRHKASLF*RSNKAS Trigger: CGATGCCTTGTTAGAACGGCAGAAAAGAGAAGCCTT...ATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATACGTTTCTGTTACCATaGCTTGCAACCTGGCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: NSKYLPKMVSPLASRHLYTFLLP*LATWLL Trigger: TAGAAGCCAGGTTGCAAGGCATGGTAACAGAAACGT...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAACTCTCAGGACCTCCATaGATGTTCTTAGTGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KYLPKMVSPLASRHLYYELSGPP*MFLVSS Trigger: TGATGACACTAAGAACATGCATGGAGGTCCTGAGAG...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAAGCTCCTGCTGCAGATTaGGCTTATCTTCCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKAPAAD*AYLPHR Trigger: TCTATGAGGAAGATAAGCGCAATCTGCAGCAGGAGC...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAATCTGTTACCATGCCTTaGAACCTGGCTTCTAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KYLPKMVSPLASRHLYYESVTMP*NLASNL Trigger: CAGATTAGAAGCCAGGTTGCAAGGCATGGTAACAGA...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAACATATCTGCAAACTCTaGATCTGCTTGTCGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KYLPKMVSPLASRHLYYEHICKL*ICLSLA Trigger: AGCAAGCGACAAGCAGATCCAGAGTTTGCAGATATG...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCTGGCTTCTCAGGTTTaGGTTCAGTCACAATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IYIQNSKYLPKMVSPLASLASQV*VQSQWP Trigger: AGGCCATTGTGACTGAACCCAAACCTGAGAAGCCAG...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTGAGGCTAGTTCCTGGTaGGTCAGCATGTACTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IYIQNSKYLPKMVSPLASEASSW*VSMYFS Trigger: TGAGAAGTACATGCTGACCCACCAGGAACTAGCCTC...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAAGCAGGGTTGTACTATTaGTCACTTCCACACAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKAGLYY*SLPHSI Trigger: AATGCTGTGTGGAAGTGATCAATAGTACAACCCTGC...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAACATTCTTGCCATGAATaGGGTCATCTACCAAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKHSCHE*GHLPRD Trigger: ATCCCTTGGTAGATGACCTCATTCATGGCAAGAATG...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTGGCCGTTGGAAATCTaGGCAATATTGTTACTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NSKYLPKMVSPLASRHLYWPLEI*AILLLE Trigger: TTCTAGTAACAATATTGCTCAGATTTCCAACGGCCA...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAATCAATATCAGTAAACTaGACCGATTGTCCGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKSISVN*TDCPPP Trigger: AGGTGGCGGACAATCGGTTCAGTTTACTGATATTGA...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTACCCAGAGTTTATTCTaGATCTCTAGCTGGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IYIQNSKYLPKMVSPLASTQSLF*ISSWVA Trigger: AGCCACCCAGCTAGAGATGCAGAATAAACTCTGGGT...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAATGGAGATAGTTTCTaGTCCCATTCCGAGATACAG | + |
|
Preference number: 4 (lower is better) Translates to: KYLPKMVSPLASRHLYYENGDSF*SHSEIQ Trigger: CTGTATCTCGGAATGGGAGCAGAAACTATCTCCATT...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAAGAGCGTTTTAGATTGTaGGAGTTTGGGCTTTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKERFRL*EFGLYG Trigger: CCCATAAAGCCCAAACTCCCACAATCTAAAACGCTC...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAGACTCTCTATTCAAATaGGTGTTAGCAATGCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KYLPKMVSPLASRHLYYEDSLFK*VLAMRL Trigger: GAGACGCATTGCTAACACCCATTTGAATAGAGAGTC...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | AAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTTACTTCTGTACATCCTaGCACATACATATTGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KTLNTFLKWFHHWPVAIFYFCTS*HIHIVV Trigger: AACCACAATATGTATGTGGCAGGATGTACAGAAGTA...AAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTATGCGTCTCTTTTTCTaGCCTCTCCAGAAAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IYIQNSKYLPKMVSPLASMRLFF*PLQKTS Trigger: TGAGGTTTTCTGGAGAGGGCAGAAAAAGAGACGCAT...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAAGCCACATACATATTGTaGTTCTTATCTTCTCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKATYIL*FLSSRS Trigger: GCTCCGAGAAGATAAGAACCACAATATGTATGTGGC...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTAGTGTCATCAATGACTaGTTAATGTTTCCGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IYIQNSKYLPKMVSPLASSVIND*LMFPAS Trigger: TGAGGCCGGAAACATTAATCAGTCATTGATGACACT...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAACTTCAGCAAATCTCATaGCTTGCAAGCTTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKLQQIS*LASFLH Trigger: ATGAAGAAAGCTTGCAAGTCATGAGATTTGCTGAAG...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR TCA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCATCGAAGTAGTTCTTaGATAGATGGGTTAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IYIQNSKYLPKMVSPLASHRSSS*IDGLAL Trigger: CAAAGCTAACCCATCTATTCAAGAACTACTTCGATG...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAATTTATGGGATCAAACTaGACTTCTTCCAATAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: KYLPKMVSPLASRHLYYEFMGSN*TSSNRS Trigger: TGATCTATTGGAAGAAGTGCAGTTTGATCCCATAAA...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CCA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTATAGTCTTCAGCCTTTaGATTCACACACACGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: IYIQNSKYLPKMVSPLASIVFSL*IHTHDH Trigger: ATGATCGTGTGTGTGAATCCAAAGGCTGAAGACTAT...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAATACATTTATCATATCTaGAAACTCTGGATCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKYIYHI*KLWICL Trigger: CAAGCAGATCCAGAGTTTGCAGATATGATAAATGTA...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR GCA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTTTCATCAACTTCTTCTaGTTTGCAGAATTCTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IYIQNSKYLPKMVSPLASFINFF*FAEFLY Trigger: GTACAAGAATTCTGCAAAGCAGAAGAAGTTGATGAA...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS TCA 90 bp | GGGTGTTCCTGCGGCAATGGTCCTCTTCTACGCCTATCTCACTGCTaGATGTGGGGACCATCTCCCTGCCTTCAGTCCAGCACATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GCSCGNGPLLRLSHC*MWGPSPCLQSSTCL Trigger: GAGGCATGTGCTGGACTGAAGGCAGGGAGATGGTCCCCACATTCAGCAGTGAGATAGGCGTAGAAGAGGACCATTGCCGCAGGAACACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CCA 90 bp | CCATCTGCTCCCTGCAGAGCGGGACCTTCTGTGTCGTACAGGAATTaGGGTGTTCCTGCGGCAATGGTCCTCTTCTACGCCTATCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: PSAPCRAGPSVSYRN*GVPAAMVLFYAYLT Trigger: AGTGAGATAGGCGTAGAAGAGGACCATTGCCGCAGGAACACCCCAATTCCTGTACGACACAGAAGGTCCCGCTCTGCAGGGAGCAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS GCA 90 bp | TGCATCTCTAGCTGGGTGGCTGCCACCCGACGCTCACATTCCTTCTaGCACTTCATCGACGTTTCTGTTACCATGCCTTGCAACCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CISSWVAATRRSHSF*HFIDVSVTMPCNLA Trigger: AGCCAGGTTGCAAGGCATGGTAACAGAAACGTCGATGAAGTGGCAGAAGGAATGTGAGCGTCGGGTGGCAGCCACCCAGCTAGAGATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS TCA 90 bp | GACCATCTCCCTGCCTTCAGTCCAGCACATGCCTCGCCTTCTGTCTaGCACGATACACGTTTTACTTTGTCCTGGCTCCTGCTGCCTATG | + |
|
Preference number: 5 (lower is better) Translates to: DHLPAFSPAHASPSV*HDTRFTLSWLLLPM Trigger: CATAGGCAGCAGGAGCCAGGACAAAGTAAAACGTGTATCGTGTCAGACAGAAGGCGAGGCATGTGCTGGACTGAAGGCAGGGAGATGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS GCA 90 bp | CGCCTTCTGTCTGACACGATACACGTTTTACTTTGTCCTGGCTCCTaGTGCCTATGCCTTGCAAGGGAGGTGACATTGACAGGTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLLSDTIHVLLCPGS*CLCLAREVTLTGVL Trigger: CAGCACACCTGTCAATGTCACCTCCCTTGCAAGGCATAGGCAGCAGGAGCCAGGACAAAGTAAAACGTGTATCGTGTCAGACAGAAGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS GCA 90 bp | CTTGGGTTGTGCGTGGTGCTGATATCCCGGTCCCAGCTGAGATCCTaGTCTCATTTCAACGGCAACAGAGCACCTTGTTTCTACATCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGLCVVLISRSQLRS*SHFNGNRAPCFYIG Trigger: ACCGATGTAGAAACAAGGTGCTCTGTTGCCGTTGAAATGAGAGCAGGATCTCAGCTGGGACCGGGATATCAGCACCACGCACAACCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CCA 90 bp | TGGAGCTGCAGGGTTGTACTATTGATCACTTCCACACAGCATTCTTaGTCAGGAAAGCTCAGGGGGCGAACCCTACAGTACACCCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: WSCRVVLLITSTQHS*SGKLRGRTLQYTPT Trigger: AGTGGGGGTGTACTGTAGGGTTCGCCCCCTGAGCTTTCCTGACCAAGAATGCTGTGTGGAAGTGATCAATAGTACAACCCTGCAGCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS TCA 90 bp | GTTTCTCCAAAGTGTCAGCCAGCTTTGGAAGGGTCTCCTCATCATTaGTATCCAAAAGCTTGCATGGGGGCAGCGGTGGGAAGCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VSPKCQPALEGSPHH*YPKACMGAAVGSSV Trigger: TACAGAGCTTCCCACCGCTGCCCCCATGCAAGCTTTTGGATATCAATGATGAGGAGACCCTTCCAAAGCTGGCTGACACTTTGGAGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS GCA 90 bp | GCCTTCAGCTGTTTGAGCTTTTCATCTTTGACCCAGAGTTTATTCTaGATCTCTAGCTGGGTGGCTGCCACCCGACGCTCACATTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AFSCLSFSSLTQSLF*ISSWVAATRRSHSF Trigger: GAAGGAATGTGAGCGTCGGGTGGCAGCCACCCAGCTAGAGATGCAGAATAAACTCTGGGTCAAAGATGAAAAGCTCAAACAGCTGAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CCA 90 bp | CACCTTGTTTCTACATCGGTCCATTCAGACTCTGTACCATCTGGTTaGGCAGGTGCTAGGGTGGACGATCTTCGTTTCCGACTACCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HLVSTSVHSDSVPSG*AGARVDDLRFRLPV Trigger: AACTGGTAGTCGGAAACGAAGATCGTCCACCCTAGCACCTGCCCAACCAGATGGTACAGAGTCTGAATGGACCGATGTAGAAACAAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS TCA 90 bp | CTGTGTAGCTGCGGCTGGCTCATGAGTTGCTGGCCGTTGGAAATCTaGGCAATATTGTTACTAGAAAGAGGTAGAGGCGAAGGAGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LCSCGWLMSCWPLEI*AILLLERGRGEGET Trigger: TGTCTCTCCTTCGCCTCTACCTCTTTCTAGTAACAATATTGCTCAGATTTCCAACGGCCAGCAACTCATGAGCCAGCCGCAGCTACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS GCA 90 bp | GACGCTCACATTCCTTCTGCCACTTCATCGACGTTTCTGTTACCATaGCTTGCAACCTGGCTTCTAATCTGCGCTTGTCAGAAAACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: DAHIPSATSSTFLLP*LATWLLICACQKTA Trigger: GGCAGTTTTCTGACAAGCGCAGATTAGAAGCCAGGTTGCAAGGCATGGTAACAGAAACGTCGATGAAGTGGCAGAAGGAATGTGAGCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS GCA 90 bp | TCTGACACGATACACGTTTTACTTTGTCCTGGCTCCTGCTGCCTATaGCTTGCAAGGGAGGTGACATTGACAGGTGTGCTGAATGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SDTIHVLLCPGSCCL*LAREVTLTGVLNGD Trigger: ATCTCCATTCAGCACACCTGTCAATGTCACCTCCCTTGCAAGGCATAGGCAGCAGGAGCCAGGACAAAGTAAAACGTGTATCGTGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS GCA 90 bp | CTTCTGTCTGACACGATACACGTTTTACTTTGTCCTGGCTCCTGCTaGCTATGCCTTGCAAGGGAGGTGACATTGACAGGTGTGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLSDTIHVLLCPGSC*LCLAREVTLTGVLN Trigger: ATTCAGCACACCTGTCAATGTCACCTCCCTTGCAAGGCATAGGCAGCAGGAGCCAGGACAAAGTAAAACGTGTATCGTGTCAGACAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CCA 90 bp | CCTTCTGCCACTTCATCGACGTTTCTGTTACCATGCCTTGCAACCTaGCTTCTAATCTGCGCTTGTCAGAAAACTGCCGCTGAAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSATSSTFLLPCLAT*LLICACQKTAAEAS Trigger: AGAAGCTTCAGCGGCAGTTTTCTGACAAGCGCAGATTAGAAGCCAGGTTGCAAGGCATGGTAACAGAAACGTCGATGAAGTGGCAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CCA 90 bp | CGGTCCATTCAGACTCTGTACCATCTGGTTGGGCAGGTGCTAGGGTaGACGATCTTCGTTTCCGACTACCAGTTGGCAATTCTTGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RSIQTLYHLVGQVLG*TIFVSDYQLAILVL Trigger: TAAAACAAGAATTGCCAACTGGTAGTCGGAAACGAAGATCGTCCACCCTAGCACCTGCCCAACCAGATGGTACAGAGTCTGAATGGACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS GCA 90 bp | CGCTTGCTAGAGGGGGTCTTTGGAATGGGCAAGGCTTCTCTTTTCTaGCGTTCTAACAAGGCATCGACTTCACACTGTATTTCCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: RLLEGVFGMGKASLF*RSNKASTSHCISIL Trigger: CAGTATGGAAATACAGTGTGAAGTCGATGCCTTGTTAGAACGGCAGAAAAGAGAAGCCTTGCCCATTCCAAAGACCCCCTCTAGCAAGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS GCA 90 bp | TCATCGACGTTTCTGTTACCATGCCTTGCAACCTGGCTTCTAATCTaGGCTTGTCAGAAAACTGCCGCTGAAGCTTCTGATTCTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSTFLLPCLATWLLI*ACQKTAAEASDSGS Trigger: AGAGCCAGAATCAGAAGCTTCAGCGGCAGTTTTCTGACAAGCGCAGATTAGAAGCCAGGTTGCAAGGCATGGTAACAGAAACGTCGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS TCA 90 bp | AGCATCCAGGGGAGCCTGGACAAGTTTAATGCTGAACACGCTATGTaGACGACTGGACTCTCTATTCAAATGGGTGTTAGCAATGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIQGSLDKFNAEHAM*TTGLSIQMGVSNAS Trigger: AGACGCATTGCTAACACCCATTTGAATAGAGAGTCCAGTCGTTCACATAGCGTGTTCAGCATTAAACTTGTCCAGGCTCCCCTGGATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS GCA 90 bp | GTTCTTATCTTCTCGGAGCGTTTTAGATTGTGGGAGTACAGACTCTaGGTTCCTCATAGGTGTACTGCAGCCGTTCCACTTGGGCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: VLIFSERFRLWEYRL*VPHRCTAAVPLGLY Trigger: ATAAAGCCCAAGTGGAACGGCTGCAGTACACCTATGAGGAACGCAGAGTCTGTACTCCCACAATCTAAAACGCTCCGAGAAGATAAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214295.2 |
||
| CDS-3UTR CAA 90 bp | ATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCGGCTGGCTCATGAGTaGCTGGCCGTTGGAAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: IQNSKYLPKMVSPLASRHRLAHE*LAVGNL Trigger: CAGATTTCCAACGGCCAGCAACTCATGAGCCAGCCG...ATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CCA 90 bp | TCTTTTTCCTGTAAGACATTGTCTCCATCAGCATCCAGGGGAGCCTaGACAAGTTTAATGCTGAACACGCTATGTGAACGACTGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SFSCKTLSPSASRGA*TSLMLNTLCERLDS Trigger: AGAGTCCAGTCGTTCACATAGCGTGTTCAGCATTAAACTTGTCCAGGCTCCCCTGGATGCTGATGGAGACAATGTCTTACAGGAAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS-3UTR CAA 90 bp | AAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTGGATCTGCTTGTCGCTaGCTAGAGGGGGTCTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KTLNTFLKWFHHWPVAIFGSACR*LEGVFG Trigger: TCCAAAGACCCCCTCTAGCAAGCGACAAGCAGATCC...AAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATCCTTGTCCACTGGTCTaGCCACTTCCACTTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NSKYLPKMVSPLASRHLYPCPLV*PLPLLG Trigger: CCCAAGAAGTGGAAGTGGCAAGACCAGTGGACAAGG...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | AAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTTTGATATCCAAAAGCTaGCATGGGGGCAGCGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KTLNTFLKWFHHWPVAIFLISKS*HGGSGG Trigger: CCCACCGCTGCCCCCATGCAAGCTTTTGGATATCAA...AAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CCA 90 bp | AGCAAATCTCATGACTTGCAAGCTTTCTTCATAGTCTTCAGCCTTTaGATTCACACACACGATCATCCGAACTTTCCCCTCCCCATCGAA | + |
|
Preference number: 5 (lower is better) Translates to: SKSHDLQAFFIVFSL*IHTHDHPNFPLPIE Trigger: TTCGATGGGGAGGGGAAAGTTCGGATGATCGTGTGTGTGAATCCAAAGGCTGAAGACTATGAAGAAAGCTTGCAAGTCATGAGATTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CCA 90 bp | CACATACATATTGTGGTTCTTATCTTCTCGGAGCGTTTTAGATTGTaGGAGTACAGACTCTGCGTTCCTCATAGGTGTACTGCAGCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: HIHIVVLIFSERFRL*EYRLCVPHRCTAAV Trigger: AACGGCTGCAGTACACCTATGAGGAACGCAGAGTCTGTACTCCCACAATCTAAAACGCTCCGAGAAGATAAGAACCACAATATGTATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214295.2 |
||
| CDS-3UTR CAA 90 bp | ATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATAGGCCACATATCACCTaGTCCACTGGTCTTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: IQNSKYLPKMVSPLASRHRPHIT*STGLAT Trigger: AGTGGCAAGACCAGTGGACAAGGTGATATGTGGCCT...ATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | AAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTTTTCTTGCGCTTGGGTaGTGCGTGGTGCTGATATCC | + |
|
Preference number: 5 (lower is better) Translates to: KTLNTFLKWFHHWPVAIFFLALG*CVVLIS Trigger: GGATATCAGCACCACGCACAACCCAAGCGCAAGAAA...AAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS TCA 90 bp | CACACACGATCATCCGAACTTTCCCCTCCCCATCGAAGTAGTTCTTaGATAGATGGGTTAGCTTTGAATCTCGATATGGAACCATCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HTRSSELSPPHRSSS*IDGLALNLDMEPSC Trigger: ACAAGATGGTTCCATATCGAGATTCAAAGCTAACCCATCTATTCAAGAACTACTTCGATGGGGAGGGGAAAGTTCGGATGATCGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS-3UTR CAA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAAACTCTGGATCTGCTaGTCGCTTGCTAGAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KYLPKMVSPLASRHLYYEKLWIC*SLARGG Trigger: ACCCCCTCTAGCAAGCGACAAGCAGATCCAGAGTTT...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | ATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATGATACACGTTTTACTTaGTCCTGGCTCCTGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IQNSKYLPKMVSPLASRHDTRFT*SWLLLP Trigger: AGGCAGCAGGAGCCAGGACAAAGTAAAACGTGTATC...ATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | AAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTAGTAAACTGAACCGATaGTCCGCCACCTCTCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KTLNTFLKWFHHWPVAIFSKLNR*SATSRL Trigger: AAGACGAGAGGTGGCGGACAATCGGTTCAGTTTACT...AAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATCGGCAACAGAGCACCTaGTTTCTACATCGGTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: NSKYLPKMVSPLASRHLYRQQST*FLHRSI Trigger: AATGGACCGATGTAGAAACAAGGTGCTCTGTTGCCG...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CCA 90 bp | TTCTGCTTTGCAGAATTCTTGTACATTTATCATATCTGCAAACTCTaGATCTGCTTGTCGCTTGCTAGAGGGGGTCTTTGGAATGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FCFAEFLYIYHICKL*ICLSLARGGLWNGQ Trigger: TTGCCCATTCCAAAGACCCCCTCTAGCAAGCGACAAGCAGATCCAGAGTTTGCAGATATGATAAATGTACAAGAATTCTGCAAAGCAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS-3UTR CAA 90 bp | ATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTGGAGACCCTGTCATaGTGTAGGTTTTTCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: IQNSKYLPKMVSPLASRHLETLS*CRFFHF Trigger: GAAGTGGAAAAACCTACACAATGACAGGGTCTCCAG...ATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAAGCAAGGGAGGTGACATaGACAGGTGTGCTGAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKAREVT*TGVLNG Trigger: TCCATTCAGCACACCTGTCAATGTCACCTCCCTTGC...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS GCA 90 bp | ATCAACTTCTTCTGCTTTGCAGAATTCTTGTACATTTATCATATCTaGAAACTCTGGATCTGCTTGTCGCTTGCTAGAGGGGGTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: INFFCFAEFLYIYHI*KLWICLSLARGGLW Trigger: CCAAAGACCCCCTCTAGCAAGCGACAAGCAGATCCAGAGTTTGCAGATATGATAAATGTACAAGAATTCTGCAAAGCAGAAGAAGTTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS GCA 90 bp | CTCAAAAGCCTCCTCCGTAGATTTCACTTCTACTTCTGTACATCCTaGCACATACATATTGTGGTTCTTATCTTCTCGGAGCGTTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LKSLLRRFHFYFCTS*HIHIVVLIFSERFR Trigger: TCTAAAACGCTCCGAGAAGATAAGAACCACAATATGTATGTGGCAGGATGTACAGAAGTAGAAGTGAAATCTACGGAGGAGGCTTTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS-3UTR CAA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTTTTCCTGTAAGACATaGTCTCCATCAGCATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSKYLPKMVSPLASRHLYFSCKT*SPSASR Trigger: CCTGGATGCTGATGGAGACAATGTCTTACAGGAAAA...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATCATAGTCTTCAGCCTTaGGATTCACACACACGATCA | + |
|
Preference number: 5 (lower is better) Translates to: NSKYLPKMVSPLASRHLYHSLQP*DSHTRS Trigger: TGATCGTGTGTGTGAATCCAAAGGCTGAAGACTATG...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTTCTGGCTTCTCAGGTTaGGGTTCAGTCACAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IYIQNSKYLPKMVSPLASSGFSG*GSVTMA Trigger: GGCCATTGTGACTGAACCCAAACCTGAGAAGCCAGA...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTTAGATTGTGGGAGTTaGGGCTTTATGGGATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NSKYLPKMVSPLASRHLYLDCGS*GFMGSN Trigger: GTTTGATCCCATAAAGCCCAAACTCCCACAATCTAA...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | AAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAATCGGAGCGTTTTAGATaGTGGGAGTTTGGGCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: KYLPKMVSPLASRHLYYESERFR*WEFGLY Trigger: ATAAAGCCCAAACTCCCACAATCTAAAACGCTCCGA...TTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTAAGTGTCAGCCAGCTTaGGAAGGGTCTCCTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: IYIQNSKYLPKMVSPLASKCQPA*EGSPHH Trigger: ATGATGAGGAGACCCTTCCAAAGCTGGCTGACACTT...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAACCTGCCACATACATATaGTGGTTCTTATCTTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKPATYI*WFLSSR Trigger: CCGAGAAGATAAGAACCACAATATGTATGTGGCAGG...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAAATGGCCTTCAGCTGTTaGAGCTTTTCATCTTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKMAFSC*SFSSLT Trigger: GGTCAAAGATGAAAAGCTCAAACAGCTGAAGGCCAT...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | ATATACATACAAAACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTTGCCACTTCCACTTCTaGGGTTACTTCAGCAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: IYIQNSKYLPKMVSPLASCHFHF*GYFSKS Trigger: AGATTTGCTGAAGTAACCCAAGAAGTGGAAGTGGCA...ACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTTTTGTATGTATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | AACTCTAAATACCTTCCTAAAATGGTTTCACCACTGGCCAGTCGCCATCTTTATAAAGCTAGACATTTTTaGTTAAGGTCCTCGGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: NSKYLPKMVSPLASRHLYKARHF*LRSSVI Trigger: AATGACCGAGGACCTTAACAAAAAATGTCTAGCTTT...ATAAAGATGGCGACTGGCCAGTGGTGAAACCATTTTAGGAAGGTATTTAGAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS-3UTR CAA 90 bp | TGGTTTCACCACTGGCCAGTCGCCATCTTTATTATGAAAGTCTTAATTGTTAAAATAGATGGGTTAGCTTaGAATCTCGATATGGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: WFHHWPVAIFIMKVLIVKIDGLA*NLDMEP Trigger: TGGTTCCATATCGAGATTCAAAGCTAACCCATCTAT...TTTAACAATTAAGACTTTCATAATAAAGATGGCGACTGGCCAGTGGTGAAACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS GCA 90 bp | GTAAGAGACAAATACTCCATAGACACTGTCTTCATCAACTTCTTCTaGTTTGCAGAATTCTTGTACATTTATCATATCTGCAAACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VRDKYSIDTVFINFF*FAEFLYIYHICKLW Trigger: CCAGAGTTTGCAGATATGATAAATGTACAAGAATTCTGCAAAGCAGAAGAAGTTGATGAAGACAGTGTCTATGGAGTATTTGTCTCTTAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS TCA 90 bp | ACTGTTCCTATCATTAGACTTAAACACATAACGTTTTGCTTGAAATaGCCCTATGCTGTTAAAGATCATATTCAAACAACGAGGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TVPIIRLKHITFCLK*PYAVKDHIQTTRKQ Trigger: CTGCTTCCTCGTTGTTTGAATATGATCTTTAACAGCATAGGGTCATTTCAAGCAAAACGTTATGTGTTTAAGTCTAATGATAGGAACAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CCA 72 bp | CCCTGCAGAGCGGGACCTTCTGTGTCGTACAGGAATTaGGGTGTTCCTGCGGCAATGGTCCTCTTCTACGCC | + |
|
Preference number: 6 (lower is better) Translates to: PCRAGPSVSYRN*GVPAAMVLFYA Trigger: GGCGTAGAAGAGGACCATTGCCGCAGGAACACCCCAATTCCTGTACGACACAGAAGGTCCCGCTCTGCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CAA 90 bp | CCCATCTGCTCCCTGCAGAGCGGGACCTTCTGTGTCGTACAGGAATaGGGGTGTTCCTGCGGCAATGGTCCTCTTCTACGCCTATCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PICSLQSGTFCVVQE*GCSCGNGPLLRLSH Trigger: GTGAGATAGGCGTAGAAGAGGACCATTGCCGCAGGAACACCCCAATTCCTGTACGACACAGAAGGTCCCGCTCTGCAGGGAGCAGATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CAA 72 bp | TCCCGCTCCCGGGAGGGTCTCTCTGGCTTCTCAGGTTaGGGTTCAGTCACAATGGCCTTCAGCTGTTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRSREGLSGFSG*GSVTMAFSCLS Trigger: GCTCAAACAGCTGAAGGCCATTGTGACTGAACCCAAACCTGAGAAGCCAGAGAGACCCTCCCGGGAGCGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CAA 72 bp | TCCCTGCAGAGCGGGACCTTCTGTGTCGTACAGGAATaGGGGTGTTCCTGCGGCAATGGTCCTCTTCTACGC | + |
|
Preference number: 6 (lower is better) Translates to: SLQSGTFCVVQE*GCSCGNGPLLR Trigger: GCGTAGAAGAGGACCATTGCCGCAGGAACACCCCAATTCCTGTACGACACAGAAGGTCCCGCTCTGCAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CAA 90 bp | GGCAGGTTCCTGTACCGCCTCCCGGGTGTCAGGCCACATATCACCTaGTCCACTGGTCTTGCCACTTCCACTTCTTGGGTTACTTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GRFLYRLPGVRPHIT*STGLATSTSWVTSA Trigger: TGCTGAAGTAACCCAAGAAGTGGAAGTGGCAAGACCAGTGGACAAGGTGATATGTGGCCTGACACCCGGGAGGCGGTACAGGAACCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS GCA 72 bp | AGCTGGGTGGCTGCCACCCGACGCTCACATTCCTTCTaGCACTTCATCGACGTTTCTGTTACCATGCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SWVAATRRSHSF*HFIDVSVTMPC Trigger: GCAAGGCATGGTAACAGAAACGTCGATGAAGTGGCAGAAGGAATGTGAGCGTCGGGTGGCAGCCACCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CAA 72 bp | CTGTACCGCCTCCCGGGTGTCAGGCCACATATCACCTaGTCCACTGGTCTTGCCACTTCCACTTCTTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LYRLPGVRPHIT*STGLATSTSWV Trigger: AACCCAAGAAGTGGAAGTGGCAAGACCAGTGGACAAGGTGATATGTGGCCTGACACCCGGGAGGCGGTACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CAA 90 bp | TTCTCCCGGTCCCGCTCCCGGGAGGGTCTCTCTGGCTTCTCAGGTTaGGGTTCAGTCACAATGGCCTTCAGCTGTTTGAGCTTTTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: FSRSRSREGLSGFSG*GSVTMAFSCLSFSS Trigger: AGATGAAAAGCTCAAACAGCTGAAGGCCATTGTGACTGAACCCAAACCTGAGAAGCCAGAGAGACCCTCCCGGGAGCGGGACCGGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CCA 72 bp | CCTCCCGGGTGTCAGGCCACATATCACCTTGTCCACTaGTCTTGCCACTTCCACTTCTTGGGTTACTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PPGCQATYHLVH*SCHFHFLGYFS Trigger: GCTGAAGTAACCCAAGAAGTGGAAGTGGCAAGACCAGTGGACAAGGTGATATGTGGCCTGACACCCGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CAA 72 bp | GAGGAAGCAGGCCTCCAGACCCTGGAGACCCTGTCATaGTGTAGGTTTTTCCACTTCCCGTCACGCCATATG | + |
|
Preference number: 6 (lower is better) Translates to: EEAGLQTLETLS*CRFFHFPSRHM Trigger: CATATGGCGTGACGGGAAGTGGAAAAACCTACACAATGACAGGGTCTCCAGGGTCTGGAGGCCTGCTTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CAA 90 bp | GTGGAGCTGCAGGGTTGTACTATTGATCACTTCCACACAGCATTCTaGGTCAGGAAAGCTCAGGGGGCGAACCCTACAGTACACCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VELQGCTIDHFHTAF*VRKAQGANPTVHPH Trigger: GTGGGGGTGTACTGTAGGGTTCGCCCCCTGAGCTTTCCTGACCAAGAATGCTGTGTGGAAGTGATCAATAGTACAACCCTGCAGCTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CAA 90 bp | CACTGTGATGGCGTGAGGGACATGCGGCTGCATCACTGTCTCAGTTaGCACATTAGAGGCAGGCTTATGATCTACCCATCTGCTCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HCDGVRDMRLHHCLS*HIRGRLMIYPSAPC Trigger: GCAGGGAGCAGATGGGTAGATCATAAGCCTGCCTCTAATGTGCAAACTGAGACAGTGATGCAGCCGCATGTCCCTCACGCCATCACAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS GCA 72 bp | GAAATGCTGCTGCAAGAGTTAGAGCGTCTGTGTAGCTaGGGCTGGCTCATGAGTTGCTGGCCGTTGGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: EMLLQELERLCS*GWLMSCWPLEI Trigger: GATTTCCAACGGCCAGCAACTCATGAGCCAGCCGCAGCTACACAGACGCTCTAACTCTTGCAGCAGCATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS GCA 72 bp | ATGTGGGGACCATCTCCCTGCCTTCAGTCCAGCACATaGCTCGCCTTCTGTCTGACACGATACACGTTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: MWGPSPCLQSST*LAFCLTRYTFY Trigger: GTAAAACGTGTATCGTGTCAGACAGAAGGCGAGGCATGTGCTGGACTGAAGGCAGGGAGATGGTCCCCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS GCA 72 bp | TGCGTGGTGCTGATATCCCGGTCCCAGCTGAGATCCTaGTCTCATTTCAACGGCAACAGAGCACCTTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: CVVLISRSQLRS*SHFNGNRAPCF Trigger: GAAACAAGGTGCTCTGTTGCCGTTGAAATGAGAGCAGGATCTCAGCTGGGACCGGGATATCAGCACCACGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CAA 90 bp | CTTTGTCCTGGCTCCTGCTGCCTATGCCTTGCAAGGGAGGTGACATaGACAGGTGTGCTGAATGGAGATAGTTTCTGCTCCCATTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: LCPGSCCLCLAREVT*TGVLNGDSFCSHSE Trigger: CTCGGAATGGGAGCAGAAACTATCTCCATTCAGCACACCTGTCAATGTCACCTCCCTTGCAAGGCATAGGCAGCAGGAGCCAGGACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS TCA 72 bp | AAGTGTCAGCCAGCTTTGGAAGGGTCTCCTCATCATTaGTATCCAAAAGCTTGCATGGGGGCAGCGGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KCQPALEGSPHH*YPKACMGAAVG Trigger: TCCCACCGCTGCCCCCATGCAAGCTTTTGGATATCAATGATGAGGAGACCCTTCCAAAGCTGGCTGACACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS TCA 72 bp | AGCGCCTTTTCATTTGCAACAGACACTGTGATGGCGTaGGGGACATGCGGCTGCATCACTGTCTCAGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SAFSFATDTVMA*GTCGCITVSVC Trigger: GCAAACTGAGACAGTGATGCAGCCGCATGTCCCTCACGCCATCACAGTGTCTGTTGCAAATGAAAAGGCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CCA 72 bp | CAGACTCTGTACCATCTGGTTGGGCAGGTGCTAGGGTaGACGATCTTCGTTTCCGACTACCAGTTGGCAATT | + |
|
Preference number: 6 (lower is better) Translates to: QTLYHLVGQVLG*TIFVSDYQLAI Trigger: AATTGCCAACTGGTAGTCGGAAACGAAGATCGTCCACCCTAGCACCTGCCCAACCAGATGGTACAGAGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CAA 72 bp | AAAGTGTCAGCCAGCTTTGGAAGGGTCTCCTCATCATaGATATCCAAAAGCTTGCATGGGGGCAGCGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KVSASFGRVSSS*ISKSLHGGSGG Trigger: CCCACCGCTGCCCCCATGCAAGCTTTTGGATATCAATGATGAGGAGACCCTTCCAAAGCTGGCTGACACTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CAA 72 bp | GGCGTGAGGGACATGCGGCTGCATCACTGTCTCAGTTaGCACATTAGAGGCAGGCTTATGATCTACCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: GVRDMRLHHCLS*HIRGRLMIYPS Trigger: AGATGGGTAGATCATAAGCCTGCCTCTAATGTGCAAACTGAGACAGTGATGCAGCCGCATGTCCCTCACGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CAA 90 bp | CGTTTCTCCAAAGTGTCAGCCAGCTTTGGAAGGGTCTCCTCATCATaGATATCCAAAAGCTTGCATGGGGGCAGCGGTGGGAAGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RFSKVSASFGRVSSS*ISKSLHGGSGGKLC Trigger: ACAGAGCTTCCCACCGCTGCCCCCATGCAAGCTTTTGGATATCAATGATGAGGAGACCCTTCCAAAGCTGGCTGACACTTTGGAGAAACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CAA 90 bp | ATGTTTCCGGCCTCACGTAGTCTGTTCCCTTCTGCTTTAGTACGGTaGGTTCTTTCGCTCCCAGCAAGATCTACCAGAGACAGCTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: MFPASRSLFPSALVR*VLSLPARSTRDSWL Trigger: AAGCCAGCTGTCTCTGGTAGATCTTGCTGGGAGCGAAAGAACCAACCGTACTAAAGCAGAAGGGAACAGACTACGTGAGGCCGGAAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS TCA 72 bp | ATGAGTACTGAGTCTCCTTATAGTCCCCATTTCTGTTaGGTCGATAGCCCTCAGGAGTGTGGAGCTGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: MSTESPYSPHFC*VDSPQECGAAG Trigger: CCCTGCAGCTCCACACTCCTGAGGGCTATCGACTCAACAGAAATGGGGACTATAAGGAGACTCAGTACTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS GCA 72 bp | ATACACGTTTTACTTTGTCCTGGCTCCTGCTGCCTATaGCTTGCAAGGGAGGTGACATTGACAGGTGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: IHVLLCPGSCCL*LAREVTLTGVL Trigger: CAGCACACCTGTCAATGTCACCTCCCTTGCAAGGCATAGGCAGCAGGAGCCAGGACAAAGTAAAACGTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS GCA 72 bp | GACACGATACACGTTTTACTTTGTCCTGGCTCCTGCTaGCTATGCCTTGCAAGGGAGGTGACATTGACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: DTIHVLLCPGSC*LCLAREVTLTG Trigger: ACCTGTCAATGTCACCTCCCTTGCAAGGCATAGGCAGCAGGAGCCAGGACAAAGTAAAACGTGTATCGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CAA 72 bp | GCCTCACGTAGTCTGTTCCCTTCTGCTTTAGTACGGTaGGTTCTTTCGCTCCCAGCAAGATCTACCAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ASRSLFPSALVR*VLSLPARSTRD Trigger: GTCTCTGGTAGATCTTGCTGGGAGCGAAAGAACCAACCGTACTAAAGCAGAAGGGAACAGACTACGTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CAA 72 bp | CGGGTGTCAGGCCACATATCACCTTGTCCACTGGTCTaGCCACTTCCACTTCTTGGGTTACTTCAGCAAATC | + |
|
Preference number: 6 (lower is better) Translates to: RVSGHISPCPLV*PLPLLGLLQQI Trigger: GATTTGCTGAAGTAACCCAAGAAGTGGAAGTGGCAAGACCAGTGGACAAGGTGATATGTGGCCTGACACCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS GCA 72 bp | GGGTGTCAGGCCACATATCACCTTGTCCACTGGTCTTaGCACTTCCACTTCTTGGGTTACTTCAGCAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: GCQATYHLVHWS*HFHFLGYFSKS Trigger: AGATTTGCTGAAGTAACCCAAGAAGTGGAAGTGGCAAGACCAGTGGACAAGGTGATATGTGGCCTGACACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS GCA 72 bp | TGTTTGAGCTTTTCATCTTTGACCCAGAGTTTATTCTaGATCTCTAGCTGGGTGGCTGCCACCCGACGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CLSFSSLTQSLF*ISSWVAATRRS Trigger: TGAGCGTCGGGTGGCAGCCACCCAGCTAGAGATGCAGAATAAACTCTGGGTCAAAGATGAAAAGCTCAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS GCA 72 bp | TTCTCGGAGCGTTTTAGATTGTGGGAGTACAGACTCTaGGTTCCTCATAGGTGTACTGCAGCCGTTCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: FSERFRLWEYRL*VPHRCTAAVPL Trigger: AAGTGGAACGGCTGCAGTACACCTATGAGGAACGCAGAGTCTGTACTCCCACAATCTAAAACGCTCCGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214295.2 |
||
| CDS CAA 72 bp | CAGGGTTGTACTATTGATCACTTCCACACAGCATTCTaGGTCAGGAAAGCTCAGGGGGCGAACCCTACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: QGCTIDHFHTAF*VRKAQGANPTV Trigger: TACTGTAGGGTTCGCCCCCTGAGCTTTCCTGACCAAGAATGCTGTGTGGAAGTGATCAATAGTACAACCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS TCA 72 bp | GTTCCTTCTGGGTGGTGTGAGTGCCAAATACCCGCTTaGATGAGTACTGAGTCTCCTTATAGTCCCCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: VPSGWCECQIPA*MSTESPYSPHF Trigger: GAAATGGGGACTATAAGGAGACTCAGTACTCATTCAAGCGGGTATTTGGCACTCACACCACCCAGAAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS TCA 72 bp | TGCGGCTGGCTCATGAGTTGCTGGCCGTTGGAAATCTaGGCAATATTGTTACTAGAAAGAGGTAGAGGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: CGWLMSCWPLEI*AILLLERGRGE Trigger: TTCGCCTCTACCTCTTTCTAGTAACAATATTGCTCAGATTTCCAACGGCCAGCAACTCATGAGCCAGCCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS GCA 72 bp | ATTCCTTCTGCCACTTCATCGACGTTTCTGTTACCATaGCTTGCAACCTGGCTTCTAATCTGCGCTTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: IPSATSSTFLLP*LATWLLICACQ Trigger: CTGACAAGCGCAGATTAGAAGCCAGGTTGCAAGGCATGGTAACAGAAACGTCGATGAAGTGGCAGAAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CCA 72 bp | ACTTCATCGACGTTTCTGTTACCATGCCTTGCAACCTaGCTTCTAATCTGCGCTTGTCAGAAAACTGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: TSSTFLLPCLAT*LLICACQKTAA Trigger: AGCGGCAGTTTTCTGACAAGCGCAGATTAGAAGCCAGGTTGCAAGGCATGGTAACAGAAACGTCGATGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CAA 72 bp | TCTGCGTTCCTCATAGGTGTACTGCAGCCGTTCCACTaGGGCTTTATGGGATCAAACTGCACTTCTTCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SAFLIGVLQPFH*GFMGSNCTSSN Trigger: ATTGGAAGAAGTGCAGTTTGATCCCATAAAGCCCAAGTGGAACGGCTGCAGTACACCTATGAGGAACGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214295.2 |
||
| CDS CAA 90 bp | TGCCACATACATATTGTGGTTCTTATCTTCTCGGAGCGTTTTAGATaGTGGGAGTACAGACTCTGCGTTCCTCATAGGTGTACTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CHIHIVVLIFSERFR*WEYRLCVPHRCTAA Trigger: GGCTGCAGTACACCTATGAGGAACGCAGAGTCTGTACTCCCACAATCTAAAACGCTCCGAGAAGATAAGAACCACAATATGTATGTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214295.2 |
||
| CDS TCA 72 bp | CTTCTGGGTGGTGTGAGTGCCAAATACCCGCTTGAATaGGTACTGAGTCTCCTTATAGTCCCCATTTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLGGVSAKYPLE*VLSLLIVPISV Trigger: AACAGAAATGGGGACTATAAGGAGACTCAGTACTCATTCAAGCGGGTATTTGGCACTCACACCACCCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS GCA 72 bp | TTCTGCCACTTCATCGACGTTTCTGTTACCATGCCTTaGAACCTGGCTTCTAATCTGCGCTTGTCAGAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: FCHFIDVSVTMP*NLASNLRLSEN Trigger: GTTTTCTGACAAGCGCAGATTAGAAGCCAGGTTGCAAGGCATGGTAACAGAAACGTCGATGAAGTGGCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CCA 72 bp | TGTAAGACATTGTCTCCATCAGCATCCAGGGGAGCCTaGACAAGTTTAATGCTGAACACGCTATGTGAACGA | + |
|
Preference number: 6 (lower is better) Translates to: CKTLSPSASRGA*TSLMLNTLCER Trigger: TCGTTCACATAGCGTGTTCAGCATTAAACTTGTCCAGGCTCCCCTGGATGCTGATGGAGACAATGTCTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CAA 90 bp | CAGGCCACATATCACCTTGTCCACTGGTCTTGCCACTTCCACTTCTaGGGTTACTTCAGCAAATCTCATGACTTGCAAGCTTTCTTCATA | + |
|
Preference number: 6 (lower is better) Translates to: QATYHLVHWSCHFHF*GYFSKSHDLQAFFI Trigger: TATGAAGAAAGCTTGCAAGTCATGAGATTTGCTGAAGTAACCCAAGAAGTGGAAGTGGCAAGACCAGTGGACAAGGTGATATGTGGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CAA 90 bp | TCTGGCTTCTCAGGTTTGGGTTCAGTCACAATGGCCTTCAGCTGTTaGAGCTTTTCATCTTTGACCCAGAGTTTATTCTGCATCTCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGFSGLGSVTMAFSC*SFSSLTQSLFCISS Trigger: GCTAGAGATGCAGAATAAACTCTGGGTCAAAGATGAAAAGCTCAAACAGCTGAAGGCCATTGTGACTGAACCCAAACCTGAGAAGCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CAA 90 bp | AGTACAGACTCTGCGTTCCTCATAGGTGTACTGCAGCCGTTCCACTaGGGCTTTATGGGATCAAACTGCACTTCTTCCAATAGATCATAT | + |
|
Preference number: 6 (lower is better) Translates to: STDSAFLIGVLQPFH*GFMGSNCTSSNRSY Trigger: ATATGATCTATTGGAAGAAGTGCAGTTTGATCCCATAAAGCCCAAGTGGAACGGCTGCAGTACACCTATGAGGAACGCAGAGTCTGTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214295.2 |
||
| CDS TCA 72 bp | TTTTTGTTAAGGTCCTCGGTCATTAGTTGTCGCAGGTaGTGTCGTTTCTCCAAAGTGTCAGCCAGCTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: FLLRSSVISCRR*CRFSKVSASFG Trigger: TCCAAAGCTGGCTGACACTTTGGAGAAACGACATCACCTGCGACAACTAATGACCGAGGACCTTAACAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CCA 72 bp | CATGACTTGCAAGCTTTCTTCATAGTCTTCAGCCTTTaGATTCACACACACGATCATCCGAACTTTCCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HDLQAFFIVFSL*IHTHDHPNFPL Trigger: GAGGGGAAAGTTCGGATGATCGTGTGTGTGAATCCAAAGGCTGAAGACTATGAAGAAAGCTTGCAAGTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CCA 72 bp | ATCACCTTGTCCACTGGTCTTGCCACTTCCACTTCTTaGGTTACTTCAGCAAATCTCATGACTTGCAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ITLSTGLATSTS*VTSANLMTCKL Trigger: AAGCTTGCAAGTCATGAGATTTGCTGAAGTAACCCAAGAAGTGGAAGTGGCAAGACCAGTGGACAAGGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CCA 72 bp | CAGGTGATGTCGTTTCTCCAAAGTGTCAGCCAGCTTTaGAAGGGTCTCCTCATCATTGATATCCAAAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QVMSFLQSVSQL*KGLLIIDIQKL Trigger: AAGCTTTTGGATATCAATGATGAGGAGACCCTTCCAAAGCTGGCTGACACTTTGGAGAAACGACATCACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CAA 72 bp | TATCACCTTGTCCACTGGTCTTGCCACTTCCACTTCTaGGGTTACTTCAGCAAATCTCATGACTTGCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: YHLVHWSCHFHF*GYFSKSHDLQA Trigger: AGCTTGCAAGTCATGAGATTTGCTGAAGTAACCCAAGAAGTGGAAGTGGCAAGACCAGTGGACAAGGTGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CAA 90 bp | AGAGACAGCTGGCTTATAGTAATTTGCTCTTTTTCCTGTAAGACATaGTCTCCATCAGCATCCAGGGGAGCCTGGACAAGTTTAATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RDSWLIVICSFSCKT*SPSASRGAWTSLML Trigger: CAGCATTAAACTTGTCCAGGCTCCCCTGGATGCTGATGGAGACAATGTCTTACAGGAAAAAGAGCAAATTACTATAAGCCAGCTGTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CCA 72 bp | GCAGAATTCTTGTACATTTATCATATCTGCAAACTCTaGATCTGCTTGTCGCTTGCTAGAGGGGGTCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AEFLYIYHICKL*ICLSLARGGLW Trigger: CCAAAGACCCCCTCTAGCAAGCGACAAGCAGATCCAGAGTTTGCAGATATGATAAATGTACAAGAATTCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CCA 72 bp | ATTGTGGTTCTTATCTTCTCGGAGCGTTTTAGATTGTaGGAGTACAGACTCTGCGTTCCTCATAGGTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: IVVLIFSERFRL*EYRLCVPHRCT Trigger: AGTACACCTATGAGGAACGCAGAGTCTGTACTCCCACAATCTAAAACGCTCCGAGAAGATAAGAACCACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214295.2 |
||
| CDS CAA 72 bp | TCAGGTTTGGGTTCAGTCACAATGGCCTTCAGCTGTTaGAGCTTTTCATCTTTGACCCAGAGTTTATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SGLGSVTMAFSC*SFSSLTQSLFC Trigger: GCAGAATAAACTCTGGGTCAAAGATGAAAAGCTCAAACAGCTGAAGGCCATTGTGACTGAACCCAAACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CAA 72 bp | CATATTGTGGTTCTTATCTTCTCGGAGCGTTTTAGATaGTGGGAGTACAGACTCTGCGTTCCTCATAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HIVVLIFSERFR*WEYRLCVPHRC Trigger: ACACCTATGAGGAACGCAGAGTCTGTACTCCCACAATCTAAAACGCTCCGAGAAGATAAGAACCACAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214295.2 |
||
| CDS TCA 72 bp | TCATCCGAACTTTCCCCTCCCCATCGAAGTAGTTCTTaGATAGATGGGTTAGCTTTGAATCTCGATATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SSELSPPHRSSS*IDGLALNLDME Trigger: TTCCATATCGAGATTCAAAGCTAACCCATCTATTCAAGAACTACTTCGATGGGGAGGGGAAAGTTCGGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS GCA 72 bp | TTCTGCTTTGCAGAATTCTTGTACATTTATCATATCTaGAAACTCTGGATCTGCTTGTCGCTTGCTAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: FCFAEFLYIYHI*KLWICLSLARG Trigger: CCCTCTAGCAAGCGACAAGCAGATCCAGAGTTTGCAGATATGATAAATGTACAAGAATTCTGCAAAGCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||
| CDS CAA 90 bp | TCCGTAGATTTCACTTCTACTTCTGTACATCCTGCCACATACATATaGTGGTTCTTATCTTCTCGGAGCGTTTTAGATTGTGGGAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SVDFTSTSVHPATYI*WFLSSRSVLDCGSL Trigger: CAAACTCCCACAATCTAAAACGCTCCGAGAAGATAAGAACCACAATATGTATGTGGCAGGATGTACAGAAGTAGAAGTGAAATCTACGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034815.9 |
||
| CDS CAA 90 bp | TCCGTAGATTTCACTTCTACTTCTGTACATCCTGCCACATACATATaGTGGTTCTTATCTTCTCGGAGCGTTTTAGATTGTGGGAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: SVDFTSTSVHPATYI*WFLSSRSVLDCGST Trigger: TGTACTCCCACAATCTAAAACGCTCCGAGAAGATAAGAACCACAATATGTATGTGGCAGGATGTACAGAAGTAGAAGTGAAATCTACGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214295.2 |
||
| CDS GCA 72 bp | AAATACTCCATAGACACTGTCTTCATCAACTTCTTCTaGTTTGCAGAATTCTTGTACATTTATCATATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KYSIDTVFINFF*FAEFLYIYHIC Trigger: GCAGATATGATAAATGTACAAGAATTCTGCAAAGCAGAAGAAGTTGATGAAGACAGTGTCTATGGAGTATTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034815.9 ENSMUST00000214295.2 |
||