Pregenerated sensors for KIF22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030677Ensembl transcript IDs: ENSMUST00000032915.8, ENSMUST00000205754.2, ENSMUST00000205806.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | GGGCCGTGGAGCTCCCTCCAGCCCACGATGAGCTGGGCTTTCTTCTaGCCAATGCGCTGCAGGCTGCGCAGTTCCCGAGCTGAGCCTTCA | + |
Preference number: 5 (lower is better) Translates to: GPWSSLQPTMSWAFF*PMRCRLRSSRAEPS Trigger: TGAAGGCTCAGCTCGGGAACTGCGCAGCCTGCAGCGCATTGGCCAGAAGAAAGCCCAGCTCATCGTGGGCTGGAGGGAGCTCCACGGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032915.8 ENSMUST00000205754.2 |
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CDS CCA 90 bp | ACCTCACTGAAGGGGCCGTGGAGCTCCCTCCAGCCCACGATGAGCTaGGCTTTCTTCTGGCCAATGCGCTGCAGGCTGCGCAGTTCCCGA | + |
Preference number: 5 (lower is better) Translates to: TSLKGPWSSLQPTMS*AFFWPMRCRLRSSR Trigger: TCGGGAACTGCGCAGCCTGCAGCGCATTGGCCAGAAGAAAGCCCAGCTCATCGTGGGCTGGAGGGAGCTCCACGGCCCCTTCAGTGAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032915.8 ENSMUST00000205754.2 |
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CDS TCA 90 bp | GCCGTCCCTCAGCACTCTCTTCCCTTGCTAGTTGCAGGAGGTCCATaGGAGCCCGAGGAATCACTCCAGGTTGCTCTGGGCTGCCCAGCA | + |
Preference number: 5 (lower is better) Translates to: AVPQHSLPLLVAGGP*EPEESLQVALGCPA Trigger: TGCTGGGCAGCCCAGAGCAACCTGGAGTGATTCCTCGGGCTCTCATGGACCTCCTGCAACTAGCAAGGGAAGAGAGTGCTGAGGGACGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032915.8 ENSMUST00000205806.2 |
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CDS CCA 90 bp | CTGCTCGAAGTCAGAGAAGCTGGTGATGGGCTTCTGTGTGAGGCCTaGGATCAGGATGTTCCCTCGGCAGTCTTCGCGGATCACGAGGTC | + |
Preference number: 5 (lower is better) Translates to: LLEVREAGDGLLCEA*DQDVPSAVFADHEV Trigger: GACCTCGTGATCCGCGAAGACTGCCGAGGGAACATCCTGATCCCAGGCCTCACACAGAAGCCCATCACCAGCTTCTCTGACTTCGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS GCA 90 bp | GAAACGTCCCATGGCCGTCCCTCAGCACTCTCTTCCCTTGCTAGTTaGAGGAGGTCCATGAGAGCCCGAGGAATCACTCCAGGTTGCTCT | + |
Preference number: 5 (lower is better) Translates to: ETSHGRPSALSSLAS*RRSMRARGITPGCS Trigger: AGAGCAACCTGGAGTGATTCCTCGGGCTCTCATGGACCTCCTGCAACTAGCAAGGGAAGAGAGTGCTGAGGGACGGCCATGGGACGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032915.8 ENSMUST00000205806.2 |
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CDS GCA 90 bp | CGGGTGGCTCCTACAGCTCGATTTCTACTGGCTGGAAGGAAGTGCTaGTCGAAGTCAGAGAAGCTGGTGATGGGCTTCTGTGTGAGGCCT | + |
Preference number: 5 (lower is better) Translates to: RVAPTARFLLAGRKC*SKSEKLVMGFCVRP Trigger: AGGCCTCACACAGAAGCCCATCACCAGCTTCTCTGACTTCGAGCAGCACTTCCTTCCAGCCAGTAGAAATCGAGCTGTAGGAGCCACCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS GCA 90 bp | AGCCGGGTGGCTCCTACAGCTCGATTTCTACTGGCTGGAAGGAAGTaGTGCTCGAAGTCAGAGAAGCTGGTGATGGGCTTCTGTGTGAGG | + |
Preference number: 5 (lower is better) Translates to: SRVAPTARFLLAGRK*CSKSEKLVMGFCVR Trigger: CCTCACACAGAAGCCCATCACCAGCTTCTCTGACTTCGAGCAGCACTTCCTTCCAGCCAGTAGAAATCGAGCTGTAGGAGCCACCCGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS GCA 90 bp | CTGGCGGCCAAGCTCAAGAGATTCGCCTTCAGGAAAGACTCCACCTaGTTCCCAGAGATGCCTTCCACCTGTTCCAAGTCCTCCACCTCA | + |
Preference number: 5 (lower is better) Translates to: LAAKLKRFAFRKDST*FPEMPSTCSKSSTS Trigger: TGAGGTGGAGGACTTGGAACAGGTGGAAGGCATCTCTGGGAAGCAGGTGGAGTCTTTCCTGAAGGCGAATCTCTTGAGCTTGGCCGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CCA 90 bp | GCGCTGGTTAAGCCGGGTGGCTCCTACAGCTCGATTTCTACTGGCTaGAAGGAAGTGCTGCTCGAAGTCAGAGAAGCTGGTGATGGGCTT | + |
Preference number: 5 (lower is better) Translates to: ALVKPGGSYSSISTG*KEVLLEVREAGDGL Trigger: AAGCCCATCACCAGCTTCTCTGACTTCGAGCAGCACTTCCTTCCAGCCAGTAGAAATCGAGCTGTAGGAGCCACCCGGCTTAACCAGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CCA 90 bp | GCTTTGCCACTGTGCCACTATAAGAGGCAGGCGGCTGGAGAATTGTaGGAGTGTTCTCTTTTTCCCTTGGATCCGGTGCCTCCTGGGCCA | + |
Preference number: 5 (lower is better) Translates to: ALPLCHYKRQAAGEL*ECSLFPLDPVPPGP Trigger: TGGCCCAGGAGGCACCGGATCCAAGGGAAAAAGAGAACACTCCCACAATTCTCCAGCCGCCTGCCTCTTATAGTGGCACAGTGGCAAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CCA 90 bp | AGACGAGTGAGCTTGCTGTCCCGGTATGGTATGCGAGGGAGGCCCTaGTTTAATGCATCCACCACTTTGCCCAGTACAAAGAGGGAGGTG | + |
Preference number: 5 (lower is better) Translates to: RRVSLLSRYGMRGRP*FNASTTLPSTKREV Trigger: CACCTCCCTCTTTGTACTGGGCAAAGTGGTGGATGCATTAAACCAGGGCCTCCCTCGCATACCATACCGGGACAGCAAGCTCACTCGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS TCA 90 bp | CTCTTTGAGCCGAATGCCCTGGTTGCCTGTGCGACGGTTGTCCTCTaGACCAGCCAAATCAATAAGGTAGAGTTTTCCTTCCCGCTGGCG | + |
Preference number: 5 (lower is better) Translates to: LFEPNALVACATVVL*TSQINKVEFSFPLA Trigger: CGCCAGCGGGAAGGAAAACTCTACCTTATTGATTTGGCTGGTTCAGAGGACAACCGTCGCACAGGCAACCAGGGCATTCGGCTCAAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS GCA 90 bp | AAATGGAGTCAAACGTTCACGCTGATCTACCTTGACCAAGAGCACTaGGTGACTACGGGAAGAGCGCTGGTTAAGCCGGGTGGCTCCTAC | + |
Preference number: 5 (lower is better) Translates to: KWSQTFTLIYLDQEH*VTTGRALVKPGGSY Trigger: GTAGGAGCCACCCGGCTTAACCAGCGCTCTTCCCGTAGTCACGCAGTGCTCTTGGTCAAGGTAGATCAGCGTGAACGTTTGACTCCATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS GCA 90 bp | TGCAGAAAGGGCAAAGGTGGCCTTACCTTCAGGAAAGACTCCACCTaGTTCCCAGAGATGCCTTCCACCTGTTCCAAGTCCTCCACCTCA | + |
Preference number: 5 (lower is better) Translates to: CRKGKGGLTFRKDST*FPEMPSTCSKSSTS Trigger: TGAGGTGGAGGACTTGGAACAGGTGGAAGGCATCTCTGGGAAGCAGGTGGAGTCTTTCCTGAAGGTAAGGCCACCTTTGCCCTTTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205754.2 |
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CDS CCA 90 bp | AAGAGGGAGGTGTTGATGGCTCCGCTCTCTTTGAGCCGAATGCCCTaGTTGCCTGTGCGACGGTTGTCCTCTGAACCAGCCAAATCAATA | + |
Preference number: 5 (lower is better) Translates to: KREVLMAPLSLSRMP*LPVRRLSSEPAKSI Trigger: TATTGATTTGGCTGGTTCAGAGGACAACCGTCGCACAGGCAACCAGGGCATTCGGCTCAAAGAGAGCGGAGCCATCAACACCTCCCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CCA 90 bp | AGGCAAGTACACTGGCATTCTGCCCTTCCAGCAAGTGCCTTAGGATaGGCTGTACTGAACCTACATAGACTTCCTGCTGAGTGCTCTTCT | + |
Preference number: 5 (lower is better) Translates to: RQVHWHSALPASALG*AVLNLHRLPAECSS Trigger: AGAAGAGCACTCAGCAGGAAGTCTATGTAGGTTCAGTACAGCCCATCCTAAGGCACTTGCTGGAAGGGCAGAATGCCAGTGTACTTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032915.8 ENSMUST00000205806.2 |
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CDS GCA 90 bp | AACGTTCCATACTCAGGAGGTTCTCCAACATGGCTGGATCCATATTaGTTAGCTTCTGTAAGAGGCTTAGTTTCTGGGAGGCAGACGCTG | + |
Preference number: 5 (lower is better) Translates to: NVPYSGGSPTWLDPY*LASVRGLVSGRQTL Trigger: CAGCGTCTGCCTCCCAGAAACTAAGCCTCTTACAGAAGCTAAGCAATATGGATCCAGCCATGTTGGAGAACCTCCTGAGTATGGAACGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CCA 90 bp | ACCAGCCAAATCAATAAGGTAGAGTTTTCCTTCCCGCTGGCGAAATaGAGTCAAACGTTCACGCTGATCTACCTTGACCAAGAGCACTGC | + |
Preference number: 5 (lower is better) Translates to: TSQINKVEFSFPLAK*SQTFTLIYLDQEHC Trigger: GCAGTGCTCTTGGTCAAGGTAGATCAGCGTGAACGTTTGACTCCATTTCGCCAGCGGGAAGGAAAACTCTACCTTATTGATTTGGCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CCA 90 bp | CCTGGGAACCCAGCAAACGTTCCATACTCAGGAGGTTCTCCAACATaGCTGGATCCATATTGCTTAGCTTCTGTAAGAGGCTTAGTTTCT | + |
Preference number: 5 (lower is better) Translates to: PGNPANVPYSGGSPT*LDPYCLASVRGLVS Trigger: AGAAACTAAGCCTCTTACAGAAGCTAAGCAATATGGATCCAGCCATGTTGGAGAACCTCCTGAGTATGGAACGTTTGCTGGGTTCCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS TCA 90 bp | AGGCCGGTTAATCACCTCCTTGGACCTAGCAGTGAAGTTCAATGCTaGAATTGTATCCTGGTAAAAACGTCTTTCAGGAGCAATGTTGGC | + |
Preference number: 5 (lower is better) Translates to: RPVNHLLGPSSEVQC*NCILVKTSFRSNVG Trigger: GCCAACATTGCTCCTGAAAGACGTTTTTACCAGGATACAATTTCAGCATTGAACTTCACTGCTAGGTCCAAGGAGGTGATTAACCGGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CAA 90 bp | GCCACCCTTACTCGAGCTAGAGGCGGACGCCGGCCAAGCCCTCCTTaGCTTACACAGCGGCCAGGTCCTGAGGTGGCCGACGCCATCTCC | + |
Preference number: 6 (lower is better) Translates to: ATLTRARGGRRPSPP*LTQRPGPEVADAIS Trigger: GGAGATGGCGTCGGCCACCTCAGGACCTGGCCGCTGTGTAAGCAAAGGAGGGCTTGGCCGGCGTCCGCCTCTAGCTCGAGTAAGGGTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CCA 72 bp | AAGGGGCCGTGGAGCTCCCTCCAGCCCACGATGAGCTaGGCTTTCTTCTGGCCAATGCGCTGCAGGCTGCGC | + |
Preference number: 6 (lower is better) Translates to: KGPWSSLQPTMS*AFFWPMRCRLR Trigger: GCGCAGCCTGCAGCGCATTGGCCAGAAGAAAGCCCAGCTCATCGTGGGCTGGAGGGAGCTCCACGGCCCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032915.8 ENSMUST00000205754.2 |
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CDS CCA 72 bp | AGCTCCCTCCAGCCCACGATGAGCTGGGCTTTCTTCTaGCCAATGCGCTGCAGGCTGCGCAGTTCCCGAGCT | + |
Preference number: 6 (lower is better) Translates to: SSLQPTMSWAFF*PMRCRLRSSRA Trigger: AGCTCGGGAACTGCGCAGCCTGCAGCGCATTGGCCAGAAGAAAGCCCAGCTCATCGTGGGCTGGAGGGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032915.8 ENSMUST00000205754.2 |
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CDS CCA 72 bp | GTGTTGATGGCTCCGCTCTCTTTGAGCCGAATGCCCTaGTTGCCTGTGCGACGGTTGTCCTCTGAACCAGCC | + |
Preference number: 6 (lower is better) Translates to: VLMAPLSLSRMP*LPVRRLSSEPA Trigger: GGCTGGTTCAGAGGACAACCGTCGCACAGGCAACCAGGGCATTCGGCTCAAAGAGAGCGGAGCCATCAACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CAA 90 bp | GGGGCTTTGCCACTGTGCCACTATAAGAGGCAGGCGGCTGGAGAATaGTGGGAGTGTTCTCTTTTTCCCTTGGATCCGGTGCCTCCTGGG | + |
Preference number: 6 (lower is better) Translates to: GALPLCHYKRQAAGE*WECSLFPLDPVPPG Trigger: CCCAGGAGGCACCGGATCCAAGGGAAAAAGAGAACACTCCCACAATTCTCCAGCCGCCTGCCTCTTATAGTGGCACAGTGGCAAAGCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS TCA 72 bp | CAGCACTCTCTTCCCTTGCTAGTTGCAGGAGGTCCATaGGAGCCCGAGGAATCACTCCAGGTTGCTCTGGGC | + |
Preference number: 6 (lower is better) Translates to: QHSLPLLVAGGP*EPEESLQVALG Trigger: GCCCAGAGCAACCTGGAGTGATTCCTCGGGCTCTCATGGACCTCCTGCAACTAGCAAGGGAAGAGAGTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032915.8 ENSMUST00000205806.2 |
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CDS GCA 72 bp | CATGGCCGTCCCTCAGCACTCTCTTCCCTTGCTAGTTaGAGGAGGTCCATGAGAGCCCGAGGAATCACTCCA | + |
Preference number: 6 (lower is better) Translates to: HGRPSALSSLAS*RRSMRARGITP Trigger: TGGAGTGATTCCTCGGGCTCTCATGGACCTCCTGCAACTAGCAAGGGAAGAGAGTGCTGAGGGACGGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032915.8 ENSMUST00000205806.2 |
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CDS CAA 72 bp | TTGATGGCTCCGCTCTCTTTGAGCCGAATGCCCTGGTaGCCTGTGCGACGGTTGTCCTCTGAACCAGCCAAA | + |
Preference number: 6 (lower is better) Translates to: LMAPLSLSRMPW*PVRRLSSEPAK Trigger: TTTGGCTGGTTCAGAGGACAACCGTCGCACAGGCAACCAGGGCATTCGGCTCAAAGAGAGCGGAGCCATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CAA 72 bp | GCATCCACCACTTTGCCCAGTACAAAGAGGGAGGTGTaGATGGCTCCGCTCTCTTTGAGCCGAATGCCCTGG | + |
Preference number: 6 (lower is better) Translates to: ASTTLPSTKREV*MAPLSLSRMPW Trigger: CCAGGGCATTCGGCTCAAAGAGAGCGGAGCCATCAACACCTCCCTCTTTGTACTGGGCAAAGTGGTGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CAA 90 bp | AGGGAGGTGTTGATGGCTCCGCTCTCTTTGAGCCGAATGCCCTGGTaGCCTGTGCGACGGTTGTCCTCTGAACCAGCCAAATCAATAAGG | + |
Preference number: 6 (lower is better) Translates to: REVLMAPLSLSRMPW*PVRRLSSEPAKSIR Trigger: CCTTATTGATTTGGCTGGTTCAGAGGACAACCGTCGCACAGGCAACCAGGGCATTCGGCTCAAAGAGAGCGGAGCCATCAACACCTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS GCA 72 bp | GGCAAAGGTGGCCTTACCTTCAGGAAAGACTCCACCTaGTTCCCAGAGATGCCTTCCACCTGTTCCAAGTCC | + |
Preference number: 6 (lower is better) Translates to: GKGGLTFRKDST*FPEMPSTCSKS Trigger: GGACTTGGAACAGGTGGAAGGCATCTCTGGGAAGCAGGTGGAGTCTTTCCTGAAGGTAAGGCCACCTTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205754.2 |
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CDS CCA 72 bp | AAGCCGGGTGGCTCCTACAGCTCGATTTCTACTGGCTaGAAGGAAGTGCTGCTCGAAGTCAGAGAAGCTGGT | + |
Preference number: 6 (lower is better) Translates to: KPGGSYSSISTG*KEVLLEVREAG Trigger: ACCAGCTTCTCTGACTTCGAGCAGCACTTCCTTCCAGCCAGTAGAAATCGAGCTGTAGGAGCCACCCGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CAA 72 bp | ATGCGAGGGAGGCCCTGGTTTAATGCATCCACCACTTaGCCCAGTACAAAGAGGGAGGTGTTGATGGCTCCG | + |
Preference number: 6 (lower is better) Translates to: MRGRPWFNASTT*PSTKREVLMAP Trigger: CGGAGCCATCAACACCTCCCTCTTTGTACTGGGCAAAGTGGTGGATGCATTAAACCAGGGCCTCCCTCGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CAA 90 bp | CGGTATGGTATGCGAGGGAGGCCCTGGTTTAATGCATCCACCACTTaGCCCAGTACAAAGAGGGAGGTGTTGATGGCTCCGCTCTCTTTG | + |
Preference number: 6 (lower is better) Translates to: RYGMRGRPWFNASTT*PSTKREVLMAPLSL Trigger: CAAAGAGAGCGGAGCCATCAACACCTCCCTCTTTGTACTGGGCAAAGTGGTGGATGCATTAAACCAGGGCCTCCCTCGCATACCATACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CCA 72 bp | AGCTTGCTGTCCCGGTATGGTATGCGAGGGAGGCCCTaGTTTAATGCATCCACCACTTTGCCCAGTACAAAG | + |
Preference number: 6 (lower is better) Translates to: SLLSRYGMRGRP*FNASTTLPSTK Trigger: CTTTGTACTGGGCAAAGTGGTGGATGCATTAAACCAGGGCCTCCCTCGCATACCATACCGGGACAGCAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CCA 72 bp | CAGCTTCTGACTCAGGGGATGGCTCCAGCTTCCTTTTaGGGCCTTTCTTCAGGAGCTGGATTTGGTTTGAGG | + |
Preference number: 6 (lower is better) Translates to: QLLTQGMAPASF*GLSSGAGFGLR Trigger: CCTCAAACCAAATCCAGCTCCTGAAGAAAGGCCCCAAAAGGAAGCTGGAGCCATCCCCTGAGTCAGAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CAA 72 bp | CCACTGTGCCACTATAAGAGGCAGGCGGCTGGAGAATaGTGGGAGTGTTCTCTTTTTCCCTTGGATCCGGTG | + |
Preference number: 6 (lower is better) Translates to: PLCHYKRQAAGE*WECSLFPLDPV Trigger: CACCGGATCCAAGGGAAAAAGAGAACACTCCCACAATTCTCCAGCCGCCTGCCTCTTATAGTGGCACAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CAA 90 bp | TGGTTTAATGCATCCACCACTTTGCCCAGTACAAAGAGGGAGGTGTaGATGGCTCCGCTCTCTTTGAGCCGAATGCCCTGGTTGCCTGTG | + |
Preference number: 6 (lower is better) Translates to: WFNASTTLPSTKREV*MAPLSLSRMPWLPV Trigger: CACAGGCAACCAGGGCATTCGGCTCAAAGAGAGCGGAGCCATCAACACCTCCCTCTTTGTACTGGGCAAAGTGGTGGATGCATTAAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS GCA 72 bp | CCTACAGCTCGATTTCTACTGGCTGGAAGGAAGTGCTaGTCGAAGTCAGAGAAGCTGGTGATGGGCTTCTGT | + |
Preference number: 6 (lower is better) Translates to: PTARFLLAGRKC*SKSEKLVMGFC Trigger: ACAGAAGCCCATCACCAGCTTCTCTGACTTCGAGCAGCACTTCCTTCCAGCCAGTAGAAATCGAGCTGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS GCA 72 bp | AAGCTCAAGAGATTCGCCTTCAGGAAAGACTCCACCTaGTTCCCAGAGATGCCTTCCACCTGTTCCAAGTCC | + |
Preference number: 6 (lower is better) Translates to: KLKRFAFRKDST*FPEMPSTCSKS Trigger: GGACTTGGAACAGGTGGAAGGCATCTCTGGGAAGCAGGTGGAGTCTTTCCTGAAGGCGAATCTCTTGAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CCA 72 bp | CACTGGCATTCTGCCCTTCCAGCAAGTGCCTTAGGATaGGCTGTACTGAACCTACATAGACTTCCTGCTGAG | + |
Preference number: 6 (lower is better) Translates to: HWHSALPASALG*AVLNLHRLPAE Trigger: CTCAGCAGGAAGTCTATGTAGGTTCAGTACAGCCCATCCTAAGGCACTTGCTGGAAGGGCAGAATGCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032915.8 ENSMUST00000205806.2 |
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CDS CCA 72 bp | GGAGTGTTCTCTTTTTCCCTTGGATCCGGTGCCTCCTaGGCCAACACCTTGGCTTCCAGTTCTTTTTGCTTC | + |
Preference number: 6 (lower is better) Translates to: GVFSFSLGSGAS*ANTLASSSFCF Trigger: GAAGCAAAAAGAACTGGAAGCCAAGGTGTTGGCCCAGGAGGCACCGGATCCAAGGGAAAAAGAGAACACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CCA 72 bp | CAGCTTCTGACTCAGGGGATGGCTCCAGCTTCCTTTTaGGGCCTTTCTTCAGGAGCTGGATTTGGTTTGAGN | + |
Preference number: 6 (lower is better) Translates to: QLLTQGMAPASF*GLSSGAGFGLX Trigger: NCTCAAACCAAATCCAGCTCCTGAAGAAAGGCCCCAAAAGGAAGCTGGAGCCATCCCCTGAGTCAGAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205754.2 |
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CDS CAA 72 bp | TCCTTTTGGGGCCTTTCTTCAGGAGCTGGATTTGGTTaGAGGACTCTCGCTGCTTCTGAATCCGTTGCAGGG | + |
Preference number: 6 (lower is better) Translates to: SFWGLSSGAGFG*RTLAASESVAG Trigger: CCCTGCAACGGATTCAGAAGCAGCGAGAGTCCTCAAACCAAATCCAGCTCCTGAAGAAAGGCCCCAAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CAA 90 bp | CGCAGTTCCCGAGCTGAGCCTTCATTCAGCAGATCCAATAATTTTTaGCGCCCATGTGCCAGTAACTCTGGGCTAATCTGTACCTCCCAG | + |
Preference number: 6 (lower is better) Translates to: RSSRAEPSFSRSNNF*RPCASNSGLICTSQ Trigger: CTGGGAGGTACAGATTAGCCCAGAGTTACTGGCACATGGGCGCAAAAAATTATTGGATCTGCTGAATGAAGGCTCAGCTCGGGAACTGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032915.8 ENSMUST00000205754.2 |
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CDS TCA 72 bp | CCGAATGCCCTGGTTGCCTGTGCGACGGTTGTCCTCTaGACCAGCCAAATCAATAAGGTAGAGTTTTCCTTC | + |
Preference number: 6 (lower is better) Translates to: PNALVACATVVL*TSQINKVEFSF Trigger: GAAGGAAAACTCTACCTTATTGATTTGGCTGGTTCAGAGGACAACCGTCGCACAGGCAACCAGGGCATTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS TCA 72 bp | AGGAGCTGGATTTGGTTTGAGGACTCTCGCTGCTTCTaGATCCGTTGCAGGGGCATCACTACAGCCTTTTTC | + |
Preference number: 6 (lower is better) Translates to: RSWIWFEDSRCF*IRCRGITTAFF Trigger: GAAAAAGGCTGTAGTGATGCCCCTGCAACGGATTCAGAAGCAGCGAGAGTCCTCAAACCAAATCCAGCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CAA 72 bp | TCCCAGTTGATTCTTCTTCAGGGCCTTTGGCCTTCTTaGCCTCTGACGGGCCTAGCAGTTCTTTCTGAGACA | + |
Preference number: 6 (lower is better) Translates to: SQLILLQGLWPS*PLTGLAVLSET Trigger: TGTCTCAGAAAGAACTGCTAGGCCCGTCAGAGGCAAAGAAGGCCAAAGGCCCTGAAGAAGAATCAACTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS TCA 72 bp | CCTGGTAAAAACGTCTTTCAGGAGCAATGTTGGCAATaGGGATGCTATGAGCTGAGCCTCCCAGAGAGTCCT | + |
Preference number: 6 (lower is better) Translates to: PGKNVFQEQCWQ*GCYELSLPESP Trigger: AGGACTCTCTGGGAGGCTCAGCTCATAGCATCCTCATTGCCAACATTGCTCCTGAAAGACGTTTTTACCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CCA 72 bp | CCAGCAAACGTTCCATACTCAGGAGGTTCTCCAACATaGCTGGATCCATATTGCTTAGCTTCTGTAAGAGGC | + |
Preference number: 6 (lower is better) Translates to: PANVPYSGGSPT*LDPYCLASVRG Trigger: GCCTCTTACAGAAGCTAAGCAATATGGATCCAGCCATGTTGGAGAACCTCCTGAGTATGGAACGTTTGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS GCA 72 bp | TACTCAGGAGGTTCTCCAACATGGCTGGATCCATATTaGTTAGCTTCTGTAAGAGGCTTAGTTTCTGGGAGG | + |
Preference number: 6 (lower is better) Translates to: YSGGSPTWLDPY*LASVRGLVSGR Trigger: CCTCCCAGAAACTAAGCCTCTTACAGAAGCTAAGCAATATGGATCCAGCCATGTTGGAGAACCTCCTGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |
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CDS CAA 72 bp | CGAGCTGAGCCTTCATTCAGCAGATCCAATAATTTTTaGCGCCCATGTGCCAGTAACTCTGGGCTAATCTGT | + |
Preference number: 6 (lower is better) Translates to: RAEPSFSRSNNF*RPCASNSGLIC Trigger: ACAGATTAGCCCAGAGTTACTGGCACATGGGCGCAAAAAATTATTGGATCTGCTGAATGAAGGCTCAGCTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032915.8 ENSMUST00000205754.2 |
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CDS GCA 72 bp | TGGGCTGTACTGAACCTACATAGACTTCCTGCTGAGTaGTCTTCTCGCCATAGAAGGCATCAAACTGATATT | + |
Preference number: 6 (lower is better) Translates to: WAVLNLHRLPAE*SSRHRRHQTDI Trigger: AATATCAGTTTGATGCCTTCTATGGCGAGAAGAGCACTCAGCAGGAAGTCTATGTAGGTTCAGTACAGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032915.8 ENSMUST00000205806.2 |
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CDS CCA 72 bp | ATCAATAAGGTAGAGTTTTCCTTCCCGCTGGCGAAATaGAGTCAAACGTTCACGCTGATCTACCTTGACCAA | + |
Preference number: 6 (lower is better) Translates to: INKVEFSFPLAK*SQTFTLIYLDQ Trigger: TTGGTCAAGGTAGATCAGCGTGAACGTTTGACTCCATTTCGCCAGCGGGAAGGAAAACTCTACCTTATTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032915.8 |