Pregenerated sensors for KIF20B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024795Ensembl transcript IDs: ENSMUST00000087341.7, ENSMUST00000223776.2, ENSMUST00000223907.2, ENSMUST00000223937.2, ENSMUST00000224728.2, ENSMUST00000225408.2
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGCTTCCTCTGACTTGGCCTCGAGCACCCGGTCCTGCTCTGCCTaGGTCTGCTCCTGCTCCACTAGCGTCAGTCGCATGTCTTCAACC | + |
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Preference number: 1 (lower is better) Translates to: SASSDLASSTRSCSA*VCSCSTSVSRMSST Trigger: GGTTGAAGACATGCGACTGACGCTAGTGGAGCAGGAGCAGACTCAGGCAGAGCAGGACCGGGTGCTCGAGGCCAAGTCAGAGGAAGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR CCA 90 bp | GTCTCCATCTCCTGTGATAATTTCAGGATCCTGTCCCTCTGCTCCTaGTTCACGGCTTTCTGTGTTTGCAGCTCGGCAACTGCACTGTTG | + |
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Preference number: 1 (lower is better) Translates to: VSISCDNFRILSLCS*FTAFCVCSSATALL Trigger: CAACAGTGCAGTTGCCGAGCTGCAAACACAGAAAGCCGTGAACCAGGAGCAGAGGGACAGGATCCTGAAATTATCACAGGAGATGGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR CCA 90 bp | TGGTTTTCTGTCCCGGTGCTCTTTGCTGCAGCCTTTCTTAGTTCCTaGATTTCTTCATCCTTGTGCTTGCAGCTGGAGAGCAGAGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: WFSVPVLFAAAFLSS*ISSSLCLQLESRAF Trigger: GAAGGCTCTGCTCTCCAGCTGCAAGCACAAGGATGAAGAAATCCAGGAACTAAGAAAGGCTGCAGCAAAGAGCACCGGGACAGAAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR CCA 90 bp | TTCACCACTCTTCCTCTTCCGTGCCTTGGGGATCTTAATTGTGACTaGTGTGGGACAACCAGGGTGCTTCACTGCCATTTTGTTTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: FTTLPLPCLGDLNCD*CGTTRVLHCHFVWL Trigger: CAGCCAAACAAAATGGCAGTGAAGCACCCTGGTTGTCCCACACCAGTCACAATTAAGATCCCCAAGGCACGGAAGAGGAAGAGTGGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR GCA 90 bp | CTCTTCTCTCCACTTCTGAAGCTCACTATTTTTCTCTGCCAGCTGTaGTGTCAGTGTTTCCTCAGAAAATGGAGAGACCGCCCATGCTCA | + |
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Preference number: 1 (lower is better) Translates to: LFSPLLKLTIFLCQL*CQCFLRKWRDRPCS Trigger: TGAGCATGGGCGGTCTCTCCATTTTCTGAGGAAACACTGACAGCACAGCTGGCAGAGAAAAATAGTGAGCTTCAGAAGTGGAGAGAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
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| 3UTR GCA 90 bp | CTCTTTGCTGCAGCCTTTCTTAGTTCCTGGATTTCTTCATCCTTGTaGTTGCAGCTGGAGAGCAGAGCCTTCATCTGTGTCTCTACAGCT | + |
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Preference number: 1 (lower is better) Translates to: LFAAAFLSSWISSSL*LQLESRAFICVSTA Trigger: AGCTGTAGAGACACAGATGAAGGCTCTGCTCTCCAGCTGCAAGCACAAGGATGAAGAAATCCAGGAACTAAGAAAGGCTGCAGCAAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR GCA 90 bp | GGGGATCTTAATTGTGACTGGTGTGGGACAACCAGGGTGCTTCACTaGCATTTTGTTTGGCTGCAAAGGTGTAAACTGAATCTCCAATTC | + |
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Preference number: 1 (lower is better) Translates to: GDLNCDWCGTTRVLH*HFVWLQRCKLNLQF Trigger: GAATTGGAGATTCAGTTTACACCTTTGCAGCCAAACAAAATGGCAGTGAAGCACCCTGGTTGTCCCACACCAGTCACAATTAAGATCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR TCA 90 bp | GTCCTTTATTTTTGCCTTGTAGCAGGTAACATCCTGGGAAAGCTCTaGAAGAGCTTGCTCTCTTTCCGCTACAAGCTGTACTTGAACACG | + |
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Preference number: 1 (lower is better) Translates to: VLYFCLVAGNILGKL*KSLLSFRYKLYLNT Trigger: CGTGTTCAAGTACAGCTTGTAGCGGAAAGAGAGCAAGCTCTTTCAGAGCTTTCCCAGGATGTTACCTGCTACAAGGCAAAAATAAAGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR CCA 90 bp | CTCCACCAAGATCAACGGAATCATTATATTCAGGCTTGGGATTCATaGTTTGGTTTTCTGTCCCGGTGCTCTTTGCTGCAGCCTTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: LHQDQRNHYIQAWDS*FGFLSRCSLLQPFL Trigger: TAAGAAAGGCTGCAGCAAAGAGCACCGGGACAGAAAACCAAACCATGAATCCCAAGCCTGAATATAATGATTCCGTTGATCTTGGTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR CCA 90 bp | CAGTTTCAACTCCACCAAGATCAACGGAATCATTATATTCAGGCTTaGGATTCATGGTTTGGTTTTCTGTCCCGGTGCTCTTTGCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: QFQLHQDQRNHYIQA*DSWFGFLSRCSLLQ Trigger: CTGCAGCAAAGAGCACCGGGACAGAAAACCAAACCATGAATCCCAAGCCTGAATATAATGATTCCGTTGATCTTGGTGGAGTTGAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR CCA 90 bp | TGTGACTGGTGTGGGACAACCAGGGTGCTTCACTGCCATTTTGTTTaGCTGCAAAGGTGTAAACTGAATCTCCAATTCAGGTTTTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: CDWCGTTRVLHCHFV*LQRCKLNLQFRFWK Trigger: TTTCCAAAACCTGAATTGGAGATTCAGTTTACACCTTTGCAGCCAAACAAAATGGCAGTGAAGCACCCTGGTTGTCCCACACCAGTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR TCA 90 bp | ATTGCCAAGCGACGTTCAGCGTTTTCTTCTAATATCTCTCGTTCATaGAGAAGTGTCTCCTTAAAATCGGCTTCCCGTTGGCTCCAATAC | + |
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Preference number: 1 (lower is better) Translates to: IAKRRSAFSSNISRS*RSVSLKSASRWLQY Trigger: GTATTGGAGCCAACGGGAAGCCGATTTTAAGGAGACACTTCTTCATGAACGAGAGATATTAGAAGAAAACGCTGAACGTCGCTTGGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR TCA 90 bp | TTTCTATCAGCTTTATATTTCTCTTCAGATTCCTGCAGCTCGTCCTaGAGCTTGCTGAACTTCCTGGTAAGCACGTCTAGGTCATCCATG | + |
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Preference number: 1 (lower is better) Translates to: FLSALYFSSDSCSSS*SLLNFLVSTSRSSM Trigger: CATGGATGACCTAGACGTGCTTACCAGGAAGTTCAGCAAGCTTCAGGACGAGCTGCAGGAATCTGAAGAGAAATATAAAGCTGATAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR TCA 90 bp | GGACTAACGAGTATAAGCCCTTTCTTTGCTGGTGGCTCACCAAGCTaGAGTCCATCTTCATTTAATCTTTTCCTTTCTGAATGTGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: GLTSISPFFAGGSPS*SPSSFNLFLSECVW Trigger: CCAGACACATTCAGAAAGGAAAAGATTAAATGAAGATGGACTTCAGCTTGGTGAGCCACCAGCAAAGAAAGGGCTTATACTCGTTAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR TCA 90 bp | CAGATACCTCCCTCTGTACCTGCTCAATCTGCTTTTTGGCATCAATaGACTTCTCTTTCAGCTCAGCACAATCTTCTTCCTTCTTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: QIPPSVPAQSAFWHQ*TSLSAQHNLLPSSE Trigger: TTCAGAAGAAGGAAGAAGATTGTGCTGAGCTGAAAGAGAAGTTCATTGATGCCAAAAAGCAGATTGAGCAGGTACAGAGGGAGGTATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR GCA 90 bp | CTTCTCTTTCAGCTCAGCACAATCTTCTTCCTTCTTCTGAAGGTCTaGTTTGAGATTCTGAGTAAGAATAGAGTTTGCAGCAAGCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: LLFQLSTIFFLLLKV*FEILSKNRVCSKLL Trigger: GAGGAGCTTGCTGCAAACTCTATTCTTACTCAGAATCTCAAAGCAGACCTTCAGAAGAAGGAAGAAGATTGTGCTGAGCTGAAAGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR GCA 90 bp | TCTTCATCACGCATTACAGATACCTCCCTCTGTACCTGCTCAATCTaGTTTTTGGCATCAATGAACTTCTCTTTCAGCTCAGCACAATCT | + |
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Preference number: 1 (lower is better) Translates to: SSSRITDTSLCTCSI*FLASMNFSFSSAQS Trigger: AGATTGTGCTGAGCTGAAAGAGAAGTTCATTGATGCCAAAAAGCAGATTGAGCAGGTACAGAGGGAGGTATCTGTAATGCGTGATGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR TCA 90 bp | TACAGATCCGTCCTCTGCTGTGTTCCTAGAAATTTCCAAACTTGTTaGCTGAGGTTCAGTTTCAACTCCACCAAGATCAACGGAATCATT | + |
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Preference number: 1 (lower is better) Translates to: YRSVLCCVPRNFQTC*LRFSFNSTKINGII Trigger: AATGATTCCGTTGATCTTGGTGGAGTTGAAACTGAACCTCAGTCAACAAGTTTGGAAATTTCTAGGAACACAGCAGAGGACGGATCTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR TCA 90 bp | GATCCGTCCTCTGCTGTGTTCCTAGAAATTTCCAAACTTGTTGACTaGGGTTCAGTTTCAACTCCACCAAGATCAACGGAATCATTATAT | + |
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Preference number: 1 (lower is better) Translates to: DPSSAVFLEISKLVD*GSVSTPPRSTESLY Trigger: ATATAATGATTCCGTTGATCTTGGTGGAGTTGAAACTGAACCTCAGTCAACAAGTTTGGAAATTTCTAGGAACACAGCAGAGGACGGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR TCA 90 bp | CTCCAATTCAGGTTTTGGAAATCGAGTACTTTGTACATTTTCTGTTaGCACTTCACAAGAGTCAAGAACTACAGATCCGTCCTCTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: LQFRFWKSSTLYIFC*HFTRVKNYRSVLCC Trigger: ACAGCAGAGGACGGATCTGTAGTTCTTGACTCTTGTGAAGTGTCAACAGAAAATGTACAAAGTACTCGATTTCCAAAACCTGAATTGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR TCA 90 bp | CCAGGGTGCTTCACTGCCATTTTGTTTGGCTGCAAAGGTGTAAACTaGATCTCCAATTCAGGTTTTGGAAATCGAGTACTTTGTACATTT | + |
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Preference number: 1 (lower is better) Translates to: PGCFTAILFGCKGVN*ISNSGFGNRVLCTF Trigger: AAATGTACAAAGTACTCGATTTCCAAAACCTGAATTGGAGATTCAGTTTACACCTTTGCAGCCAAACAAAATGGCAGTGAAGCACCCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR TCA 90 bp | CTCCCAATGCAATTTATTTGGCTGTGCGTGTTCGAAGCCGTCGTTTaGGAATCTGATGATCAGTTTCTTTTACTTTCTGTTCCATTAAAA | + |
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Preference number: 1 (lower is better) Translates to: LPMQFIWLCVFEAVV*ESDDQFLLLSVPLK Trigger: TTTTAATGGAACAGAAAGTAAAAGAAACTGATCATCAGATTCTCAAACGACGGCTTCGAACACGCACAGCCAAATAAATTGCATTGGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR GCA 90 bp | TTAGATTTGCTTCCAGTTTTAAGATGGCAGATTCCTTCTCTAAAATaGTTTGCTCTAACTCAACTAAGCGCTTACACTCATCTTTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: LDLLPVLRWQIPSLK*FALTQLSAYTHLSG Trigger: CCCAGAAAGATGAGTGTAAGCGCTTAGTTGAGTTAGAGCAAAGCATTTTAGAGAAGGAATCTGCCATCTTAAAACTGGAAGCAAATCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR GCA 90 bp | TACAATGACAATGAATATAAACTTTACACTGAAACAGTCTCCCAATaGAATTTATTTGGCTGTGCGTGTTCGAAGCCGTCGTTTGAGAAT | + |
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Preference number: 1 (lower is better) Translates to: YNDNEYKLYTETVSQ*NLFGCACSKPSFEN Trigger: ATTCTCAAACGACGGCTTCGAACACGCACAGCCAAATAAATTGCATTGGGAGACTGTTTCAGTGTAAAGTTTATATTCATTGTCATTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR GCA 90 bp | TTTAAGAGTCTATATGCTTCTTTAGAGTCAGATACCTGGACCCACTaGAGATACAGAATACTTTATATTATCCACATTCAGACTGGACTG | + |
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Preference number: 1 (lower is better) Translates to: FKSLYASLESDTWTH*RYRILYIIHIQTGL Trigger: CAGTCCAGTCTGAATGTGGATAATATAAAGTATTCTGTATCTGCAGTGGGTCCAGGTATCTGACTCTAAAGAAGCATATAGACTCTTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225408.2 |
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| 3UTR CCA 90 bp | ATTTTTCAATTTGTTCTTCTAGTCCCTGAATCTGATGAGACTTTTTaGAGGAAGCCTTCACAATCTCTTTACATTCTTCCCAGATGGCTT | + |
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Preference number: 1 (lower is better) Translates to: IFQFVLLVPESDETF*RKPSQSLYILPRWL Trigger: AAGCCATCTGGGAAGAATGTAAAGAGATTGTGAAGGCTTCCTCCAAAAAGTCTCATCAGATTCAGGGACTAGAAGAACAAATTGAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR CCA 90 bp | ACTGCAGATACAGAATACTTTATATTATCCACATTCAGACTGGACTaGTCACAACTGTTCACGGATTCTTCAAATTCTGGGATAGTCAAA | + |
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Preference number: 1 (lower is better) Translates to: TADTEYFILSTFRLD*SQLFTDSSNSGIVK Trigger: TTTGACTATCCCAGAATTTGAAGAATCCGTGAACAGTTGTGACCAGTCCAGTCTGAATGTGGATAATATAAAGTATTCTGTATCTGCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225408.2 |
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| 3UTR CCA 90 bp | ACTTTTCTATTAAATCCAACAGTTCCTTGTTCTTTTTGTGGCAGGTaGAAACTCTGCATTCCTCTAATGACTTATCACTATCTTCATCTG | + |
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Preference number: 1 (lower is better) Translates to: TFLLNPTVPCSFCGR*KLCIPLMTYHYLHL Trigger: CAGATGAAGATAGTGATAAGTCATTAGAGGAATGCAGAGTTTCCACCTGCCACAAAAAGAACAAGGAACTGTTGGATTTAATAGAAAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR CCA 90 bp | ACTCCTAGTTTTAAGAGTCTATATGCTTCTTTAGAGTCAGATACCTaGACCCACTGCAGATACAGAATACTTTATATTATCCACATTCAG | + |
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Preference number: 1 (lower is better) Translates to: TPSFKSLYASLESDT*THCRYRILYIIHIQ Trigger: CTGAATGTGGATAATATAAAGTATTCTGTATCTGCAGTGGGTCCAGGTATCTGACTCTAAAGAAGCATATAGACTCTTAAAACTAGGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225408.2 |
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| 3UTR TCA 90 bp | TCAGTTTCAAGTTCTATGTCACAAATTCTATTTGTTGGTTCATCTTaGCTGTCACATTTTCCAACCAAATCTTTGAAGATTGCCAAGCGA | + |
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Preference number: 1 (lower is better) Translates to: SVSSSMSQILFVGSS*LSHFPTKSLKIAKR Trigger: TCGCTTGGCAATCTTCAAAGATTTGGTTGGAAAATGTGACAGTCAAGATGAACCAACAAATAGAATTTGTGACATAGAACTTGAAACTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAGCCTTTCTTAGTTCCTGGATTTCTTCATCCTTGTGCTTGCAGCTGGAGCTGCTTCCTCTGACTTaGCCTCGAGCACCCGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: AAAFLSSWISSSLCLQLELLPLT*PRAPGP Trigger: AGGACCGGGTGCTCGAGGCCAAGTCAGAGGAAGCAG...CTCCAGCTGCAAGCACAAGGATGAAGAAATCCAGGAACTAAGAAAGGCTGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGGTGTGGGACAACCAGGGTGCTTCACTGCCATTTTGTTTGGCTGCAAAGGTGCTTCAATACTCGCGTaGAAGGAATTTTCCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TGVGQPGCFTAILFGCKGASILA*KEFSLL Trigger: CAGCAGGGAAAATTCCTTCCACGCGAGTATTGAAGC...ACCTTTGCAGCCAAACAAAATGGCAGTGAAGCACCCTGGTTGTCCCACACCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR CAA 90 bp | GTGCTCTTTGCTGCAGCCTTTCTTAGTTCCTGGATTTCTTCATCCTaGTGCTTGCAGCTGGAGAGCAGAGCCTTCATCTGTGTCTCTACA | + |
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Preference number: 2 (lower is better) Translates to: VLFAAAFLSSWISSS*CLQLESRAFICVST Trigger: TGTAGAGACACAGATGAAGGCTCTGCTCTCCAGCTGCAAGCACAAGGATGAAGAAATCCAGGAACTAAGAAAGGCTGCAGCAAAGAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAAACAGTCTCCCAATGCAATTTATTTGGCTGTGCGTGTTCGAAGCCGTCGTCCTTTGCGCAGTGGTTaGGAACTTCAGGACATTGAG | + |
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Preference number: 2 (lower is better) Translates to: LKQSPNAIYLAVRVRSRRPLRSG*ELQDIE Trigger: CTCAATGTCCTGAAGTTCTCAACCACTGCGCAAAGG...ACGACGGCTTCGAACACGCACAGCCAAATAAATTGCATTGGGAGACTGTTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGGTGTGGGACAACCAGGGTGCTTCACTGCCATTTTGTTTGGCTGCAAAGGTACCTGGAAGCTGCTGTaGTGTGTTCAGACAATTATC | + |
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Preference number: 2 (lower is better) Translates to: TGVGQPGCFTAILFGCKGTWKLL*CVQTII Trigger: GATAATTGTCTGAACACATCACAGCAGCTTCCAGGT...ACCTTTGCAGCCAAACAAAATGGCAGTGAAGCACCCTGGTTGTCCCACACCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAGCCTTTCTTAGTTCCTGGATTTCTTCATCCTTGTGCTTGCAGCTGGAGTTTAACCCACGTACTTaGGAAGTCACCACCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: AAAFLSSWISSSLCLQLEFNPRT*EVTTWK Trigger: CTTCCAGGTGGTGACTTCTCAAGTACGTGGGTTAAA...CTCCAGCTGCAAGCACAAGGATGAAGAAATCCAGGAACTAAGAAAGGCTGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCTTTCCATTTATCCAATTCTGTGGCTAGCCAGTCTGCTTCCTCTGACTTGGAGGATCCTGTCCCTCTaGTCCTGGTTCACGGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: FLSIYPILWLASLLPLTWRILSL*SWFTAF Trigger: GAAAGCCGTGAACCAGGAGCAGAGGGACAGGATCCT...CCAAGTCAGAGGAAGCAGACTGGCTAGCCACAGAATTGGATAAATGGAAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR-3UTR TCA 90 bp | CATTCTGCAGCTTTAAACAGCGCTCCCTGTCGTCAGCATATTTTCTCATCTCCCATCCTGGGAAAGCTCTaGAAGAGCTTGCTCTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: HSAALNSAPCRQHIFSSPILGKL*KSLLSF Trigger: GAAAGAGAGCAAGCTCTTTCAGAGCTTTCCCAGGAT...GGGAGATGAGAAAATATGCTGACGACAGGGAGCGCTGTTTAAAGCTGCAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGCAGCCTTTCTTAGTTCCTGGATTTCTTCATCCTTGTGCTTGCAGCTGGAGCTCACTATTTTTCTCTaGCAGCTGTGCTGTCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: AAAFLSSWISSSLCLQLELTIFL*QLCCQC Trigger: ACACTGACAGCACAGCTGGCAGAGAAAAATAGTGAG...CTCCAGCTGCAAGCACAAGGATGAAGAAATCCAGGAACTAAGAAAGGCTGCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTTGCAGTTCTTCTCTGAGCTGCTGGATGAGACTTTCTTTCTCCTTCAGCCCCTTTCTTTGCTGGTaGCTCACCAAGCTGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: FSCSSSLSCWMRLSFSFSPFLCW*LTKLKS Trigger: GGACTTCAGCTTGGTGAGCCACCAGCAAAGAAAGGG...GCTGAAGGAGAAAGAAAGTCTCATCCAGCAGCTCAGAGAAGAACTGCAAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR CAA 90 bp | ATTCAGGCTTGGGATTCATGGTTTGGTTTTCTGTCCCGGTGCTCTTaGCTGCAGCCTTTCTTAGTTCCTGGATTTCTTCATCCTTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: IQAWDSWFGFLSRCS*LQPFLVPGFLHPCA Trigger: AGCACAAGGATGAAGAAATCCAGGAACTAAGAAAGGCTGCAGCAAAGAGCACCGGGACAGAAAACCAAACCATGAATCCCAAGCCTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAAACAGTCTCCCAATGCAATTTATTTGGCTGTGCGTGTTCGAAGCCGTCGTGCCTTCCACAACTTCTaGAACAGACTGTTGCATTTC | + |
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Preference number: 2 (lower is better) Translates to: LKQSPNAIYLAVRVRSRRAFHNF*NRLLHF Trigger: GAAATGCAACAGTCTGTTTCAGAAGTTGTGGAAGGC...ACGACGGCTTCGAACACGCACAGCCAAATAAATTGCATTGGGAGACTGTTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAGCCTTTCTTAGTTCCTGGATTTCTTCATCCTTGTGCTTGCAGCTGGAGAGGAATTTTCCCTGCTaGTCTCCTGAGTGTGATATT | + |
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Preference number: 2 (lower is better) Translates to: AAAFLSSWISSSLCLQLERNFPC*SPECDI Trigger: AATATCACACTCAGGAGATCAGCAGGGAAAATTCCT...CTCCAGCTGCAAGCACAAGGATGAAGAAATCCAGGAACTAAGAAAGGCTGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAGCCTTTCTTAGTTCCTGGATTTCTTCATCCTTGTGCTTGCAGCTGGAGTTAGATCGTTGGTTCTaGTGTGATCCTGATGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: AAAFLSSWISSSLCLQLELDRWF*CDPDAL Trigger: CAAAGCATCAGGATCACATCAGAACCAACGATCTAA...CTCCAGCTGCAAGCACAAGGATGAAGAAATCCAGGAACTAAGAAAGGCTGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTAAGGACAGCTTTTTCTTCTAACCACTTCTTTCTATCAGCTTTATATTTCCGGTCCTGCTCTGCCTaGGTCTGCTCCTGCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: VVRTAFSSNHFFLSALYFRSCSA*VCSCST Trigger: AGTGGAGCAGGAGCAGACTCAGGCAGAGCAGGACCG...GAAATATAAAGCTGATAGAAAGAAGTGGTTAGAAGAAAAAGCTGTCCTTACCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAAACAGTCTCCCAATGCAATTTATTTGGCTGTGCGTGTTCGAAGCCGTCGTCTTTCTGAATGTGTCTaGGCTCTACTGTTCTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: LKQSPNAIYLAVRVRSRRLSECV*ALLFFG Trigger: GCCAAAGAACAGTAGAGCCCAGACACATTCAGAAAG...ACGACGGCTTCGAACACGCACAGCCAAATAAATTGCATTGGGAGACTGTTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAAACAGTCTCCCAATGCAATTTATTTGGCTGTGCGTGTTCGAAGCCGTCGTTTCCAACCAAATCTTTaGAGATTGCCAAGCGACGTT | + |
|
Preference number: 2 (lower is better) Translates to: LKQSPNAIYLAVRVRSRRFQPNL*RLPSDV Trigger: AACGTCGCTTGGCAATCTTCAAAGATTTGGTTGGAA...ACGACGGCTTCGAACACGCACAGCCAAATAAATTGCATTGGGAGACTGTTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR TCA 90 bp | CATTCTGCAGCTTTAAACAGCGCTCCCTGTCGTCAGCATATTTTCTCATCTCCCCCTGTGTTTAACCTCTaGTTACTTCTGGTTTCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: HSAALNSAPCRQHIFSSPPVFNL*LLLVSR Trigger: TCTGGAAACCAGAAGTAATCAGAGGTTAAACACAGG...GGGAGATGAGAAAATATGCTGACGACAGGGAGCGCTGTTTAAAGCTGCAGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCTTGCAGTTCTTCTCTGAGCTGCTGGATGAGACTTTCTTTCTCCTTCAGCTATAAGCCCTTTCTTTaGTGGTGGCTCACCAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: FSCSSSLSCWMRLSFSFSYKPFL*WWLTKL Trigger: CAGCTTGGTGAGCCACCAGCAAAGAAAGGGCTTATA...GCTGAAGGAGAAAGAAAGTCTCATCCAGCAGCTCAGAGAAGAACTGCAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTGGTGTGGGACAACCAGGGTGCTTCACTGCCATTTTGTTTGGCTGCAAAGGTAGTAAGAATAGAGTTTaGAGCAAGCTCCTCTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: TGVGQPGCFTAILFGCKGSKNRV*SKLLFQ Trigger: TTGAAAGAGGAGCTTGCTGCAAACTCTATTCTTACT...ACCTTTGCAGCCAAACAAAATGGCAGTGAAGCACCCTGGTTGTCCCACACCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTGCAGCTTTAAACAGCGCTCCCTGTCGTCAGCATATTTTCTCATCTCCCTCTTTTTGTGGCAGGTaGAAACTCTGCATTCCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: HSAALNSAPCRQHIFSSPSFCGR*KLCIPL Trigger: TAGAGGAATGCAGAGTTTCCACCTGCCACAAAAAGA...GGGAGATGAGAAAATATGCTGACGACAGGGAGCGCTGTTTAAAGCTGCAGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CAA 90 bp | TCACGCATTACAGATACCTCCCTCTGTACCTGCTCAATCTGCTTTTaGGCATCAATGAACTTCTCTTTCAGCTCAGCACAATCTTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SRITDTSLCTCSICF*ASMNFSFSSAQSSS Trigger: GGAAGAAGATTGTGCTGAGCTGAAAGAGAAGTTCATTGATGCCAAAAAGCAGATTGAGCAGGTACAGAGGGAGGTATCTGTAATGCGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCAATAATTTCTCTTCATCACGCATTACAGATACCTCCCTCTGTACCTGCTCATCACCACCTGGAAGCTaGTGTGATGTGTTCAGACAA | + |
|
Preference number: 2 (lower is better) Translates to: LNNFSSSRITDTSLCTCSSPPGS*CDVFRQ Trigger: TTGTCTGAACACATCACAGCAGCTTCCAGGTGGTGA...TGAGCAGGTACAGAGGGAGGTATCTGTAATGCGTGATGAAGAGAAATTATTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTTCTGTTGACACTTCACAAGAGTCAAGAACTACAGATCCGTCCTCTGCTGTGTACATTCTTCCCAGATaGCTTCAATACTCGCGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: FSVDTSQESRTTDPSSAVYILPR*LQYSRG Trigger: TCCACGCGAGTATTGAAGCCATCTGGGAAGAATGTA...CACAGCAGAGGACGGATCTGTAGTTCTTGACTCTTGTGAAGTGTCAACAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CAA 90 bp | TATCTCTCGTTCATGAAGAAGTGTCTCCTTAAAATCGGCTTCCCGTaGGCTCCAATACTGAGTGAATTCCTGTGTAACTTCTTCTCGGAT | + |
|
Preference number: 2 (lower is better) Translates to: YLSFMKKCLLKIGFP*APILSEFLCNFFSD Trigger: ATCCGAGAAGAAGTTACACAGGAATTCACTCAGTATTGGAGCCAACGGGAAGCCGATTTTAAGGAGACACTTCTTCATGAACGAGAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR TCA 90 bp | CATTCTGCAGCTTTAAACAGCGCTCCCTGTCGTCAGCATATTTTCTCATCTCCCTCAATAAAGAAGTGTTaGTATTCCCAGCCTCTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: HSAALNSAPCRQHIFSSPSIKKC*YSQPLL Trigger: TAAGAGAGGCTGGGAATATCAACACTTCTTTATTGA...GGGAGATGAGAAAATATGCTGACGACAGGGAGCGCTGTTTAAAGCTGCAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTTTCCATTTATCCAATTCTGTGGCTAGCCAGTCTGCTTCCTCTGACTTGGCAAATCTTTGAAGATTaGCAAGCGACGTTCAGCGTT | + |
|
Preference number: 2 (lower is better) Translates to: FLSIYPILWLASLLPLTWQIFED*QATFSV Trigger: AACGCTGAACGTCGCTTGGCAATCTTCAAAGATTTG...CCAAGTCAGAGGAAGCAGACTGGCTAGCCACAGAATTGGATAAATGGAAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCTGTTGACACTTCACAAGAGTCAAGAACTACAGATCCGTCCTCTGCTGTGAGTTCTTCTCTGAGCTaGTGGATGAGACTTTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: FSVDTSQESRTTDPSSAVSSSLS*WMRLSF Trigger: GAAAGAAAGTCTCATCCAGCAGCTCAGAGAAGAACT...CACAGCAGAGGACGGATCTGTAGTTCTTGACTCTTGTGAAGTGTCAACAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTTCTGTTGACACTTCACAAGAGTCAAGAACTACAGATCCGTCCTCTGCTGTGTCCTTGTTCTTTTTGTaGCAGGTGGAAACTCTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: FSVDTSQESRTTDPSSAVSLFFL*QVETLH Trigger: ATGCAGAGTTTCCACCTGCCACAAAAAGAACAAGGA...CACAGCAGAGGACGGATCTGTAGTTCTTGACTCTTGTGAAGTGTCAACAGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTTTCCATTTATCCAATTCTGTGGCTAGCCAGTCTGCTTCCTCTGACTTGGCTTCTTCTGAAGGTCTaGTTTGAGATTCTGAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: FLSIYPILWLASLLPLTWLLLKV*FEILSK Trigger: CTTACTCAGAATCTCAAAGCAGACCTTCAGAAGAAG...CCAAGTCAGAGGAAGCAGACTGGCTAGCCACAGAATTGGATAAATGGAAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CAA 90 bp | TTGTTTGCATTTGTTTTATCTGTGAAACATTGCTCTCGATACTTCTaGCAGCAGTCTCCATCTCCTGTGATAATTTCAGGATCCTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: LFAFVLSVKHCSRYF*QQSPSPVIISGSCP Trigger: GGGACAGGATCCTGAAATTATCACAGGAGATGGAGACTGCTGCAAGAAGTATCGAGAGCAATGTTTCACAGATAAAACAAATGCAAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CAA 90 bp | TCTCCAATTCAGGTTTTGGAAATCGAGTACTTTGTACATTTTCTGTaGACACTTCACAAGAGTCAAGAACTACAGATCCGTCCTCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SPIQVLEIEYFVHFL*TLHKSQELQIRPLL Trigger: CAGCAGAGGACGGATCTGTAGTTCTTGACTCTTGTGAAGTGTCAACAGAAAATGTACAAAGTACTCGATTTCCAAAACCTGAATTGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCAATAATTTCTCTTCATCACGCATTACAGATACCTCCCTCTGTACCTGCTCACACATGCTGAACCTTTaGCTTTTCACTGTTCTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: LNNFSSSRITDTSLCTCSHMLNL*LFTVLQ Trigger: TTGAAGAACAGTGAAAAGTCAAAGGTTCAGCATGTG...TGAGCAGGTACAGAGGGAGGTATCTGTAATGCGTGATGAAGAGAAATTATTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTCTAACTCAACTAAGCGCTTACACTCATCTTTCTGGGTCTCTACTATCACCAAGGTCCTTTATTTTTaGCTTGTAGCAGGTAACATC | + |
|
Preference number: 2 (lower is better) Translates to: CSNSTKRLHSSFWVSTITKVLYF*LVAGNI Trigger: GATGTTACCTGCTACAAGGCAAAAATAAAGGACCTT...GGTGATAGTAGAGACCCAGAAAGATGAGTGTAAGCGCTTAGTTGAGTTAGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCTGTTGACACTTCACAAGAGTCAAGAACTACAGATCCGTCCTCTGCTGTGAACTGTTTCGTATCATaGAAATTATTCGCCAACCGT | + |
|
Preference number: 2 (lower is better) Translates to: FSVDTSQESRTTDPSSAVNCFVS*KLFANR Trigger: ACGGTTGGCGAATAATTTGCATGATACGAAACAGTT...CACAGCAGAGGACGGATCTGTAGTTCTTGACTCTTGTGAAGTGTCAACAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR GCA 90 bp | TATGCTGTGACTTCTACTAGAAGCATTGTTCAGTTTGGTGAAAGCAACGCTCTGGATACCTGGACCCACTaGAGATACAGAATACTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: YAVTSTRSIVQFGESNALDTWTH*RYRILY Trigger: ATAAAGTATTCTGTATCTGCAGTGGGTCCAGGTATC...CAGAGCGTTGCTTTCACCAAACTGAACAATGCTTCTAGTAGAAGTCACAGCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225408.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTAAGGACAGCTTTTTCTTCTAACCACTTCTTTCTATCAGCTTTATATTTCAAGCCCTTTCTTTGCTaGTGGCTCACCAAGCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VVRTAFSSNHFFLSALYFKPFLC*WLTKLK Trigger: CTTCAGCTTGGTGAGCCACCAGCAAAGAAAGGGCTT...GAAATATAAAGCTGATAGAAAGAAGTGGTTAGAAGAAAAAGCTGTCCTTACCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CCA 90 bp | CACGCATTACAGATACCTCCCTCTGTACCTGCTCAATCTGCTTTTTGGCATCAACTTCCAGTTTTAAGATaGCAGATTCCTTCTCTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HALQIPPSVPAQSAFWHQLPVLR*QIPSLK Trigger: TTTTAGAGAAGGAATCTGCCATCTTAAAACTGGAAG...TTGATGCCAAAAAGCAGATTGAGCAGGTACAGAGGGAGGTATCTGTAATGCGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTTCTGAATGTGTCTGGGCTCTACTGTTCTTTGGCATTTCACTTGTTTCATTTTGTTGGTTCATCTTaGCTGTCACATTTTCCAACC | + |
|
Preference number: 2 (lower is better) Translates to: SFLNVSGLYCSLAFHLFHFVGSS*LSHFPT Trigger: GGTTGGAAAATGTGACAGTCAAGATGAACCAACAAA...ATGAAACAAGTGAAATGCCAAAGAACAGTAGAGCCCAGACACATTCAGAAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTAAGGACAGCTTTTTCTTCTAACCACTTCTTTCTATCAGCTTTATATTTCTCTTCTCTGAGCTGCTaGATGAGACTTTCTTTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: VVRTAFSSNHFFLSALYFSSLSC*MRLSFS Trigger: GGAGAAAGAAAGTCTCATCCAGCAGCTCAGAGAAGA...GAAATATAAAGCTGATAGAAAGAAGTGGTTAGAAGAAAAAGCTGTCCTTACCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CAA 90 bp | CTACTGTTCTTTGGCATTTCACTTGTTTCATTACAAGTTGACTTATaGCTGGTTAAAGATGTATCAACCTTACTTGATGTCTTGAGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: LLFFGISLVSLQVDL*LVKDVSTLLDVLSA Trigger: GGCACTCAAGACATCAAGTAAGGTTGATACATCTTTAACCAGCAATAAGTCAACTTGTAATGAAACAAGTGAAATGCCAAAGAACAGTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CAA 90 bp | TCTGGGCTCTACTGTTCTTTGGCATTTCACTTGTTTCATTACAAGTaGACTTATTGCTGGTTAAAGATGTATCAACCTTACTTGATGTCT | + |
|
Preference number: 2 (lower is better) Translates to: SGLYCSLAFHLFHYK*TYCWLKMYQPYLMS Trigger: AGACATCAAGTAAGGTTGATACATCTTTAACCAGCAATAAGTCAACTTGTAATGAAACAAGTGAAATGCCAAAGAACAGTAGAGCCCAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CAA 90 bp | TCCTTTCTGAATGTGTCTGGGCTCTACTGTTCTTTGGCATTTCACTaGTTTCATTACAAGTTGACTTATTGCTGGTTAAAGATGTATCAA | + |
|
Preference number: 2 (lower is better) Translates to: SFLNVSGLYCSLAFH*FHYKLTYCWLKMYQ Trigger: TTGATACATCTTTAACCAGCAATAAGTCAACTTGTAATGAAACAAGTGAAATGCCAAAGAACAGTAGAGCCCAGACACATTCAGAAAGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTGAATATGCTGTGACTTCTACTAGAAGCATTGTTCAGTTTGGTGAAAGCAACGGATTCTTCAAATTCTaGGATAGTCAAAGAGTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: SEYAVTSTRSIVQFGESNGFFKF*DSQRVC Trigger: ACAAACTCTTTGACTATCCCAGAATTTGAAGAATCC...GTTGCTTTCACCAAACTGAACAATGCTTCTAGTAGAAGTCACAGCATATTCACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225408.2 |
||
| 3UTR CAA 90 bp | TTCAGTTTCAAGTTCTATGTCACAAATTCTATTTGTTGGTTCATCTaGACTGTCACATTTTCCAACCAAATCTTTGAAGATTGCCAAGCG | + |
|
Preference number: 2 (lower is better) Translates to: FSFKFYVTNSICWFI*TVTFSNQIFEDCQA Trigger: CGCTTGGCAATCTTCAAAGATTTGGTTGGAAAATGTGACAGTCAAGATGAACCAACAAATAGAATTTGTGACATAGAACTTGAAACTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CAA 90 bp | CATTTAATCTTTTCCTTTCTGAATGTGTCTGGGCTCTACTGTTCTTaGGCATTTCACTTGTTTCATTACAAGTTGACTTATTGCTGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: HLIFSFLNVSGLYCS*AFHLFHYKLTYCWL Trigger: TAACCAGCAATAAGTCAACTTGTAATGAAACAAGTGAAATGCCAAAGAACAGTAGAGCCCAGACACATTCAGAAAGGAAAAGATTAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CCA 72 bp | CTCTGCCAGCTGTGCTGTCAGTGTTTCCTCAGAAAATaGAGAGACCGCCCATGCTCATGGATTGGCAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: LCQLCCQCFLRK*RDRPCSWIGST Trigger: GGTGCTGCCAATCCATGAGCATGGGCGGTCTCTCCATTTTCTGAGGAAACACTGACAGCACAGCTGGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
||
| 3UTR TCA 72 bp | TGGAGAGCAGAGCCTTCATCTGTGTCTCTACAGCTGTaGCCAGCTGGTCACGCTCTTCTCTCCACTTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: WRAEPSSVSLQL*PAGHALLSTSE Trigger: TTCAGAAGTGGAGAGAAGAGCGTGACCAGCTGGTCACAGCTGTAGAGACACAGATGAAGGCTCTGCTCTCCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CCA 72 bp | TGTTTCCTCAGAAAATGGAGAGACCGCCCATGCTCATaGATTGGCAGCACCAACAGTAAAGATGGCCGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CFLRKWRDRPCS*IGSTNSKDGRP Trigger: AGGACGGCCATCTTTACTGTTGGTGCTGCCAATCCATGAGCATGGGCGGTCTCTCCATTTTCTGAGGAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
||
| 3UTR CCA 72 bp | TCCTGTGATAATTTCAGGATCCTGTCCCTCTGCTCCTaGTTCACGGCTTTCTGTGTTTGCAGCTCGGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: SCDNFRILSLCS*FTAFCVCSSAT Trigger: AGTTGCCGAGCTGCAAACACAGAAAGCCGTGAACCAGGAGCAGAGGGACAGGATCCTGAAATTATCACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CCA 72 bp | CTTCCTCTTCCGTGCCTTGGGGATCTTAATTGTGACTaGTGTGGGACAACCAGGGTGCTTCACTGCCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: LPLPCLGDLNCD*CGTTRVLHCHF Trigger: AAAATGGCAGTGAAGCACCCTGGTTGTCCCACACCAGTCACAATTAAGATCCCCAAGGCACGGAAGAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CAA 90 bp | CGCATTACAGATACCTCCCTCTGTACCTGCTCAATCTGCTTTTTGGCATCAATGCACGGCTTTCTGTGTTaGCAGCTCGGCAACTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: RITDTSLCTCSICFLASMHGFLC*QLGNCT Trigger: AGTGCAGTTGCCGAGCTGCAAACACAGAAAGCCGTG...CATTGATGCCAAAAAGCAGATTGAGCAGGTACAGAGGGAGGTATCTGTAATGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR GCA 72 bp | TGTCAGTGTTTCCTCAGAAAATGGAGAGACCGCCCATaGTCATGGATTGGCAGCACCAACAGTAAAGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: CQCFLRKWRDRP*SWIGSTNSKDG Trigger: GCCATCTTTACTGTTGGTGCTGCCAATCCATGAGCATGGGCGGTCTCTCCATTTTCTGAGGAAACACTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
||
| 3UTR GCA 72 bp | GCAGCCTTTCTTAGTTCCTGGATTTCTTCATCCTTGTaGTTGCAGCTGGAGAGCAGAGCCTTCATCTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: AAFLSSWISSSL*LQLESRAFICV Trigger: GACACAGATGAAGGCTCTGCTCTCCAGCTGCAAGCACAAGGATGAAGAAATCCAGGAACTAAGAAAGGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR GCA 72 bp | CCACTTCTGAAGCTCACTATTTTTCTCTGCCAGCTGTaGTGTCAGTGTTTCCTCAGAAAATGGAGAGACCGC | + |
|
Preference number: 3 (lower is better) Translates to: PLLKLTIFLCQL*CQCFLRKWRDR Trigger: GCGGTCTCTCCATTTTCTGAGGAAACACTGACAGCACAGCTGGCAGAGAAAAATAGTGAGCTTCAGAAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
||
| 3UTR GCA 72 bp | GGTGATGGGTGGACTAACGAGTATAAGCCCTTTCTTTaGTGGTGGCTCACCAAGCTGAAGTCCATCTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: GDGWTNEYKPFL*WWLTKLKSIFI Trigger: AATGAAGATGGACTTCAGCTTGGTGAGCCACCAGCAAAGAAAGGGCTTATACTCGTTAGTCCACCCATCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR GCA 72 bp | CAGGCTTGGGATTCATGGTTTGGTTTTCTGTCCCGGTaGTCTTTGCTGCAGCCTTTCTTAGTTCCTGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: QAWDSWFGFLSR*SLLQPFLVPGF Trigger: AAATCCAGGAACTAAGAAAGGCTGCAGCAAAGAGCACCGGGACAGAAAACCAAACCATGAATCCCAAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR GCA 72 bp | GGGATCTTAATTGTGACTGGTGTGGGACAACCAGGGTaGTTCACTGCCATTTTGTTTGGCTGCAAAGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GILIVTGVGQPG*FTAILFGCKGV Trigger: TACACCTTTGCAGCCAAACAAAATGGCAGTGAAGCACCCTGGTTGTCCCACACCAGTCACAATTAAGATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CCA 72 bp | TTAGTTCCTGGATTTCTTCATCCTTGTGCTTGCAGCTaGAGAGCAGAGCCTTCATCTGTGTCTCTACAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVPGFLHPCACS*RAEPSSVSLQL Trigger: CAGCTGTAGAGACACAGATGAAGGCTCTGCTCTCCAGCTGCAAGCACAAGGATGAAGAAATCCAGGAACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGTGTGGGACAACCAGGGTGCTTCACTGCCATTTTGTTTGGCTGCAAAGGTTGCATTTCTCCCATTTaGTTTTGCTCTTCGGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: TGVGQPGCFTAILFGCKGCISPI*FCSSVM Trigger: CATCACCGAAGAGCAAAACAAAATGGGAGAAATGCA...ACCTTTGCAGCCAAACAAAATGGCAGTGAAGCACCCTGGTTGTCCCACACCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CAA 90 bp | CACGGCTTTCTGTGTTTGCAGCTCGGCAACTGCACTGTTGTAACTGGCCTGGATTCCTTCAAAACTCTATaGCCTTCCACAACTTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: HGFLCLQLGNCTVVTGLDSFKTL*PSTTSE Trigger: TTCAGAAGTTGTGGAAGGCAATAGAGTTTTGAAGGA...ATCCAGGCCAGTTACAACAGTGCAGTTGCCGAGCTGCAAACACAGAAAGCCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR GCA 72 bp | CCTTTCTTAGTTCCTGGATTTCTTCATCCTTGTGCTTaGAGCTGGAGAGCAGAGCCTTCATCTGTGTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PFLVPGFLHPCA*SWRAEPSSVSL Trigger: TAGAGACACAGATGAAGGCTCTGCTCTCCAGCTGCAAGCACAAGGATGAAGAAATCCAGGAACTAAGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CCA 72 bp | TGTGGGACAACCAGGGTGCTTCACTGCCATTTTGTTTaGCTGCAAAGGTGTAAACTGAATCTCCAATTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CGTTRVLHCHFV*LQRCKLNLQFR Trigger: CCTGAATTGGAGATTCAGTTTACACCTTTGCAGCCAAACAAAATGGCAGTGAAGCACCCTGGTTGTCCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR GCA 72 bp | TTAACCCACGTACTTGAGAAGTCACCACCTGGAAGCTaGTGTGATGTGTTCAGACAATTATCCCCTTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LTHVLEKSPPGS*CDVFRQLSPLA Trigger: TGCTAAAGGGGATAATTGTCTGAACACATCACAGCAGCTTCCAGGTGGTGACTTCTCAAGTACGTGGGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR GCA 72 bp | AATTGTGACTGGTGTGGGACAACCAGGGTGCTTCACTaGCATTTTGTTTGGCTGCAAAGGTGTAAACTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: NCDWCGTTRVLH*HFVWLQRCKLN Trigger: ATTCAGTTTACACCTTTGCAGCCAAACAAAATGGCAGTGAAGCACCCTGGTTGTCCCACACCAGTCACAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CCA 72 bp | CATTTCTCCCATTTTGTTTTGCTCTTCGGTGATGGGTaGACTAACGAGTATAAGCCCTTTCTTTGCTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: HFSHFVLLFGDG*TNEYKPFLCWW Trigger: CCACCAGCAAAGAAAGGGCTTATACTCGTTAGTCCACCCATCACCGAAGAGCAAAACAAAATGGGAGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CCA 72 bp | ACGGAATCATTATATTCAGGCTTGGGATTCATGGTTTaGTTTTCTGTCCCGGTGCTCTTTGCTGCAGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TESLYSGLGFMV*FSVPVLFAAAF Trigger: AAAGGCTGCAGCAAAGAGCACCGGGACAGAAAACCAAACCATGAATCCCAAGCCTGAATATAATGATTCCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CCA 72 bp | CTCCACCAAGATCAACGGAATCATTATATTCAGGCTTaGGATTCATGGTTTGGTTTTCTGTCCCGGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LHQDQRNHYIQA*DSWFGFLSRCS Trigger: AGAGCACCGGGACAGAAAACCAAACCATGAATCCCAAGCCTGAATATAATGATTCCGTTGATCTTGGTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGCTCTTCTCTCCACTTCTGAAGCTCACTATTTTTCTCTGCCAGCTGTGCTGTGTCAATAAAGAAGTGTaGATATTCCCAGCCTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: TLFSPLLKLTIFLCQLCCVNKEV*IFPASL Trigger: AAGAGAGGCTGGGAATATCAACACTTCTTTATTGAC...ACAGCACAGCTGGCAGAGAAAAATAGTGAGCTTCAGAAGTGGAGAGAAGAGCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR GCA 72 bp | CGCATTACAGATACCTCCCTCTGTACCTGCTCAATCTaGTTTTTGGCATCAATGAACTTCTCTTTCAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RITDTSLCTCSI*FLASMNFSFSS Trigger: TGAGCTGAAAGAGAAGTTCATTGATGCCAAAAAGCAGATTGAGCAGGTACAGAGGGAGGTATCTGTAATGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGACTGGTCACAACTGTTCACGGATTCTTCAAATTCTGGGATAGTCAAAGAGCGCAGCAATGTATTTTaGTTAGCACTTTCCTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LDWSQLFTDSSNSGIVKERSNVF*LALSSF Trigger: GAAGGAGGAAAGTGCTAACAAAAATACATTGCTGCG...CTCTTTGACTATCCCAGAATTTGAAGAATCCGTGAACAGTTGTGACCAGTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225408.2 |
||
| 3UTR TCA 72 bp | GTCTCCTTAAAATCGGCTTCCCGTTGGCTCCAATACTaGGTGAATTCCTGTGTAACTTCTTCTCGGATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: VSLKSASRWLQY*VNSCVTSSRIL Trigger: TAAAATCCGAGAAGAAGTTACACAGGAATTCACTCAGTATTGGAGCCAACGGGAAGCCGATTTTAAGGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR TCA 72 bp | GTCCTCTGCTGTGTTCCTAGAAATTTCCAAACTTGTTaGCTGAGGTTCAGTTTCAACTCCACCAAGATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: VLCCVPRNFQTC*LRFSFNSTKIN Trigger: GTTGATCTTGGTGGAGTTGAAACTGAACCTCAGTCAACAAGTTTGGAAATTTCTAGGAACACAGCAGAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR GCA 72 bp | TCTGAAACAGACTGTTGCATTTCTCCCATTTTGTTTTaGTCTTCGGTGATGGGTGGACTAACGAGTATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SETDCCISPILF*SSVMGGLTSIS Trigger: GCTTATACTCGTTAGTCCACCCATCACCGAAGAGCAAAACAAAATGGGAGAAATGCAACAGTCTGTTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR GCA 72 bp | TCTTCATCACGCATTACAGATACCTCCCTCTGTACCTaGTCAATCTGCTTTTTGGCATCAATGAACTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSSRITDTSLCT*SICFLASMNFS Trigger: AGAGAAGTTCATTGATGCCAAAAAGCAGATTGAGCAGGTACAGAGGGAGGTATCTGTAATGCGTGATGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAACAGTTCCTTGTTCTTTTTGTGGCAGGTGGAAACTCTGCATTCCTCTAATGCACATGCTGAACCTTaGACTTTTCACTGTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SNSSLFFLWQVETLHSSNAHAEP*TFHCSS Trigger: TGAAGAACAGTGAAAAGTCAAAGGTTCAGCATGTGC...ATTAGAGGAATGCAGAGTTTCCACCTGCCACAAAAAGAACAAGGAACTGTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCTGTTGACACTTCACAAGAGTCAAGAACTACAGATCCGTCCTCTGCTGTGTGTGATCCTGATGCTTaGCTTCACATTCCTTTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: FSVDTSQESRTTDPSSAVCDPDA*LHIPLD Trigger: ATCTAAAGGAATGTGAAGCAAAGCATCAGGATCACA...CACAGCAGAGGACGGATCTGTAGTTCTTGACTCTTGTGAAGTGTCAACAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR TCA 72 bp | ATCTCCCTGTTTCGTACATTTTCTGCTTCTTTCGCTTaGGTGGTAAGGACAGCTTTTTCTTCTAACCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: ISLFRTFSASFA*VVRTAFSSNHF Trigger: GAAGTGGTTAGAAGAAAAAGCTGTCCTTACCACTCAAGCGAAAGAAGCAGAAAATGTACGAAACAGGGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR TCA 72 bp | TCTGCTGTGTTCCTAGAAATTTCCAAACTTGTTGACTaGGGTTCAGTTTCAACTCCACCAAGATCAACGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SAVFLEISKLVD*GSVSTPPRSTE Trigger: TTCCGTTGATCTTGGTGGAGTTGAAACTGAACCTCAGTCAACAAGTTTGGAAATTTCTAGGAACACAGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR GCA 72 bp | ACTCTATTGCCTTCCACAACTTCTGAAACAGACTGTTaGATTTCTCCCATTTTGTTTTGCTCTTCGGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: TLLPSTTSETDC*ISPILFCSSVM Trigger: CATCACCGAAGAGCAAAACAAAATGGGAGAAATGCAACAGTCTGTTTCAGAAGTTGTGGAAGGCAATAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAACAGTTCCTTGTTCTTTTTGTGGCAGGTGGAAACTCTGCATTCCTCTAATCTGTTCTTCAAAACATaGATACACTTTCCCAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SNSSLFFLWQVETLHSSNLFFKT*IHFPRV Trigger: GACTCTGGGAAAGTGTATCAATGTTTTGAAGAACAG...ATTAGAGGAATGCAGAGTTTCCACCTGCCACAAAAAGAACAAGGAACTGTTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCTAACTCAACTAAGCGCTTACACTCATCTTTCTGGGTCTCTACTATCACCCACAAATTCTATTTGTaGGTTCATCTTGACTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: CSNSTKRLHSSFWVSTITHKFYL*VHLDCH Trigger: GTGACAGTCAAGATGAACCAACAAATAGAATTTGTG...GGTGATAGTAGAGACCCAGAAAGATGAGTGTAAGCGCTTAGTTGAGTTAGAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR TCA 72 bp | CTAGAAGCATTGTTCAGTTTGGTGAAAGCAACGCTCTaGTGCTTCACTCCTAGTTTTAAGAGTCTATATGCT | + |
|
Preference number: 3 (lower is better) Translates to: LEALFSLVKATL*CFTPSFKSLYA Trigger: AGCATATAGACTCTTAAAACTAGGAGTGAAGCATCAGAGCGTTGCTTTCACCAAACTGAACAATGCTTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225408.2 |
||
| 3UTR GCA 72 bp | ACAGTTCCTTGTTCTTTTTGTGGCAGGTGGAAACTCTaGATTCCTCTAATGACTTATCACTATCTTCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: TVPCSFCGRWKL*IPLMTYHYLHL Trigger: CAGATGAAGATAGTGATAAGTCATTAGAGGAATGCAGAGTTTCCACCTGCCACAAAAAGAACAAGGAACTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR GCA 72 bp | AATGAATATAAACTTTACACTGAAACAGTCTCCCAATaGAATTTATTTGGCTGTGCGTGTTCGAAGCCGTCG | + |
|
Preference number: 3 (lower is better) Translates to: NEYKLYTETVSQ*NLFGCACSKPS Trigger: CGACGGCTTCGAACACGCACAGCCAAATAAATTGCATTGGGAGACTGTTTCAGTGTAAAGTTTATATTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CCA 72 bp | TGCTCTAACTCAACTAAGCGCTTACACTCATCTTTCTaGGTCTCTACTATCACCTCAAGGTCCTTTATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CSNSTKRLHSSF*VSTITSRSFIF Trigger: AAAAATAAAGGACCTTGAGGTGATAGTAGAGACCCAGAAAGATGAGTGTAAGCGCTTAGTTGAGTTAGAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR TCA 72 bp | AGGTTTTGGAAATCGAGTACTTTGTACATTTTCTGTTaGCACTTCACAAGAGTCAAGAACTACAGATCCGTC | + |
|
Preference number: 3 (lower is better) Translates to: RFWKSSTLYIFC*HFTRVKNYRSV Trigger: GACGGATCTGTAGTTCTTGACTCTTGTGAAGTGTCAACAGAAAATGTACAAAGTACTCGATTTCCAAAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR TCA 72 bp | TTCACTGCCATTTTGTTTGGCTGCAAAGGTGTAAACTaGATCTCCAATTCAGGTTTTGGAAATCGAGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: FTAILFGCKGVN*ISNSGFGNRVL Trigger: AAGTACTCGATTTCCAAAACCTGAATTGGAGATTCAGTTTACACCTTTGCAGCCAAACAAAATGGCAGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR TCA 72 bp | CAATTTATTTGGCTGTGCGTGTTCGAAGCCGTCGTTTaGGAATCTGATGATCAGTTTCTTTTACTTTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: QFIWLCVFEAVV*ESDDQFLLLSV Trigger: AACAGAAAGTAAAAGAAACTGATCATCAGATTCTCAAACGACGGCTTCGAACACGCACAGCCAAATAAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR GCA 72 bp | CTTCCAGTTTTAAGATGGCAGATTCCTTCTCTAAAATaGTTTGCTCTAACTCAACTAAGCGCTTACACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LPVLRWQIPSLK*FALTQLSAYTH Trigger: ATGAGTGTAAGCGCTTAGTTGAGTTAGAGCAAAGCATTTTAGAGAAGGAATCTGCCATCTTAAAACTGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CCA 72 bp | ACAGAATACTTTATATTATCCACATTCAGACTGGACTaGTCACAACTGTTCACGGATTCTTCAAATTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TEYFILSTFRLD*SQLFTDSSNSG Trigger: CCCAGAATTTGAAGAATCCGTGAACAGTTGTGACCAGTCCAGTCTGAATGTGGATAATATAAAGTATTCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225408.2 |
||
| 3UTR GCA 72 bp | AGTTTTAAGATGGCAGATTCCTTCTCTAAAATGCTTTaGTCTAACTCAACTAAGCGCTTACACTCATCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SFKMADSFSKML*SNSTKRLHSSF Trigger: GAAAGATGAGTGTAAGCGCTTAGTTGAGTTAGAGCAAAGCATTTTAGAGAAGGAATCTGCCATCTTAAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CCA 72 bp | TTAAATCCAACAGTTCCTTGTTCTTTTTGTGGCAGGTaGAAACTCTGCATTCCTCTAATGACTTATCACTAT | + |
|
Preference number: 3 (lower is better) Translates to: LNPTVPCSFCGR*KLCIPLMTYHY Trigger: ATAGTGATAAGTCATTAGAGGAATGCAGAGTTTCCACCTGCCACAAAAAGAACAAGGAACTGTTGGATTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CCA 72 bp | CCATCTTCATTTAATCTTTTCCTTTCTGAATGTGTCTaGGCTCTACTGTTCTTTGGCATTTCACTTGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PSSFNLFLSECV*ALLFFGISLVS Trigger: TGAAACAAGTGAAATGCCAAAGAACAGTAGAGCCCAGACACATTCAGAAAGGAAAAGATTAAATGAAGATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTAAGGACAGCTTTTTCTTCTAACCACTTCTTTCTATCAGCTTTATATTTCATTTGTTGGTTCATCTaGACTGTCACATTTTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: VVRTAFSSNHFFLSALYFICWFI*TVTFSN Trigger: GTTGGAAAATGTGACAGTCAAGATGAACCAACAAAT...GAAATATAAAGCTGATAGAAAGAAGTGGTTAGAAGAAAAAGCTGTCCTTACCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CCA 72 bp | TTTTCTATTAAATCCAACAGTTCCTTGTTCTTTTTGTaGCAGGTGGAAACTCTGCATTCCTCTAATGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: FSIKSNSSLFFL*QVETLHSSNDL Trigger: TAAGTCATTAGAGGAATGCAGAGTTTCCACCTGCCACAAAAAGAACAAGGAACTGTTGGATTTAATAGAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CCA 72 bp | CAGATACAGAATACTTTATATTATCCACATTCAGACTaGACTGGTCACAACTGTTCACGGATTCTTCAAATT | + |
|
Preference number: 3 (lower is better) Translates to: QIQNTLYYPHSD*TGHNCSRILQI Trigger: AATTTGAAGAATCCGTGAACAGTTGTGACCAGTCCAGTCTGAATGTGGATAATATAAAGTATTCTGTATCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225408.2 |
||
| CDS-3UTR TCA 90 bp | GAGACCGCCCATGCTCATGGATTGGCAGCACCAACAGTAAAGATGGCCGTCCTACGGTCCTGCTCTGCCTaGGTCTGCTCCTGCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ETAHAHGLAAPTVKMAVLRSCSA*VCSCST Trigger: AGTGGAGCAGGAGCAGACTCAGGCAGAGCAGGACCG...TAGGACGGCCATCTTTACTGTTGGTGCTGCCAATCCATGAGCATGGGCGGTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
||
| CDS-3UTR TCA 90 bp | GAGACCGCCCATGCTCATGGATTGGCAGCACCAACAGTAAAGATGGCCGTCCTATCCTGCAGCTCGTCCTaGAGCTTGCTGAACTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ETAHAHGLAAPTVKMAVLSCSSS*SLLNFL Trigger: CAGGAAGTTCAGCAAGCTTCAGGACGAGCTGCAGGA...TAGGACGGCCATCTTTACTGTTGGTGCTGCCAATCCATGAGCATGGGCGGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
||
| CDS-3UTR CCA 90 bp | AGCTGTGCTGTCAGTGTTTCCTCAGAAAATGGAGAGACCGCCCATGCTCATGGACTGCTTCCTCTGACTTaGCCTCGAGCACCCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCAVSVSSENGETAHAHGLLPLT*PRAPGP Trigger: AGGACCGGGTGCTCGAGGCCAAGTCAGAGGAAGCAG...TCCATGAGCATGGGCGGTCTCTCCATTTTCTGAGGAAACACTGACAGCACAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
||
| 3UTR CAA 72 bp | TCCTCAGAAAATGGAGAGACCGCCCATGCTCATGGATaGGCAGCACCAACAGTAAAGATGGCCGTCCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSENGETAHAHG*AAPTVKMAVLP Trigger: TGGTAGGACGGCCATCTTTACTGTTGGTGCTGCCAATCCATGAGCATGGGCGGTCTCTCCATTTTCTGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
||
| 3UTR CAA 72 bp | GCTGCAGCCTTTCTTAGTTCCTGGATTTCTTCATCCTaGTGCTTGCAGCTGGAGAGCAGAGCCTTCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AAAFLSSWISSS*CLQLESRAFIC Trigger: ACAGATGAAGGCTCTGCTCTCCAGCTGCAAGCACAAGGATGAAGAAATCCAGGAACTAAGAAAGGCTGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| CDS-3UTR TCA 90 bp | CCATGCTCATGGATTGGCAGCACCAACAGTAAAGATGGCCGTCCTACCAAAGGCCCTGTGTTTAACCTCTaGTTACTTCTGGTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PCSWIGSTNSKDGRPTKGPVFNL*LLLVSR Trigger: TCTGGAAACCAGAAGTAATCAGAGGTTAAACACAGG...GCCTTTGGTAGGACGGCCATCTTTACTGTTGGTGCTGCCAATCCATGAGCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
||
| CDS-3UTR CCA 90 bp | CACGCTCTTCTCTCCACTTCTGAAGCTCACTATTTTTCTCTGCCAGCTGTGCTGCGTCTAGGTCATCCATaGTTCCTGTGTTTAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HALLSTSEAHYFSLPAVLRLGHP*FLCLTS Trigger: AGAGGTTAAACACAGGAACCATGGATGACCTAGACG...CAGCACAGCTGGCAGAGAAAAATAGTGAGCTTCAGAAGTGGAGAGAAGAGCGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
||
| CDS-3UTR GCA 90 bp | AGCTGTGCTGTCAGTGTTTCCTCAGAAAATGGAGAGACCGCCCATGCTCATGGAGTTTCGTACATTTTCTaGTTCTTTCGCTTGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SCAVSVSSENGETAHAHGVSYIF*FFRLSG Trigger: ACCACTCAAGCGAAAGAAGCAGAAAATGTACGAAAC...TCCATGAGCATGGGCGGTCTCTCCATTTTCTGAGGAAACACTGACAGCACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
||
| CDS-3UTR GCA 90 bp | CACGCTCTTCTCTCCACTTCTGAAGCTCACTATTTTTCTCTGCCAGCTGTGCTGTTCATCACTTCATTCTaGAGCTTTAAACAGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HALLSTSEAHYFSLPAVLFITSF*SFKQRS Trigger: GGAGCGCTGTTTAAAGCTGCAGAATGAAGTGATGAA...CAGCACAGCTGGCAGAGAAAAATAGTGAGCTTCAGAAGTGGAGAGAAGAGCGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
||
| 3UTR CAA 72 bp | TGGGATTCATGGTTTGGTTTTCTGTCCCGGTGCTCTTaGCTGCAGCCTTTCTTAGTTCCTGGATTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WDSWFGFLSRCS*LQPFLVPGFLH Trigger: ATGAAGAAATCCAGGAACTAAGAAAGGCTGCAGCAAAGAGCACCGGGACAGAAAACCAAACCATGAATCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CAA 72 bp | ACTCCACCAAGATCAACGGAATCATTATATTCAGGCTaGGGATTCATGGTTTGGTTTTCTGTCCCGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPPRSTESLYSG*GFMVWFSVPVL Trigger: GAGCACCGGGACAGAAAACCAAACCATGAATCCCAAGCCTGAATATAATGATTCCGTTGATCTTGGTGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CAA 72 bp | TTCATGAAGAAGTGTCTCCTTAAAATCGGCTTCCCGTaGGCTCCAATACTGAGTGAATTCCTGTGTAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: FMKKCLLKIGFP*APILSEFLCNF Trigger: GAAGTTACACAGGAATTCACTCAGTATTGGAGCCAACGGGAAGCCGATTTTAAGGAGACACTTCTTCATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCTTGCAGTTCTTCTCTGAGCTGCTGGATGAGACTTTCTTTCTCCTTCAGCCGTTTTGTGTCTTCATaGTTCGTTTCACTAACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FSCSSSLSCWMRLSFSFSRFVSS*FVSLTR Trigger: ACGAGTTAGTGAAACGAAGCATGAAGACACAAAACG...GCTGAAGGAGAAAGAAAGTCTCATCCAGCAGCTCAGAGAAGAACTGCAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CAA 72 bp | AAATTATTCGCCAACCGTGTGACTTCTTCTCTGAACTaGACTTCCTTTGCACTTAGATCGTTGGTTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KLFANRVTSSLN*TSFALRSLVLM Trigger: CATCAGAACCAACGATCTAAGTGCAAAGGAAGTCAAGTTCAGAGAAGAAGTCACACGGTTGGCGAATAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CAA 72 bp | ATGTCTTCAACCAGCTTCTCCTTAACACTGAGATCTTaGCACACTTTCTCATACTGTTGTACAGCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MSSTSFSLTLRS*HTFSYCCTASS Trigger: GGAAGAAGCTGTACAACAGTATGAGAAAGTGTGCAAAGATCTCAGTGTTAAGGAGAAGCTGGTTGAAGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| 3UTR CAA 72 bp | AACTTTTCTATTAAATCCAACAGTTCCTTGTTCTTTTaGTGGCAGGTGGAAACTCTGCATTCCTCTAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: NFSIKSNSSLFF*WQVETLHSSND Trigger: GTCATTAGAGGAATGCAGAGTTTCCACCTGCCACAAAAAGAACAAGGAACTGTTGGATTTAATAGAAAAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224728.2 |
||
| CDS-3UTR CAA 90 bp | ACCGCCCATGCTCATGGATTGGCAGCACCAACAGTAAAGATGGCCGTCCTACCATTCTGCTTCTTTCGCTaGAGTGGTAAGGACAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TAHAHGLAAPTVKMAVLPFCFFR*SGKDSF Trigger: AAAGCTGTCCTTACCACTCAAGCGAAAGAAGCAGAA...TGGTAGGACGGCCATCTTTACTGTTGGTGCTGCCAATCCATGAGCATGGGCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
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| CDS TCA 90 bp | GCCACCTGTCCAGAGCTCTTCTCACTTAAGTGGCCAAGGATGCTTTaGGGGTCTTTCAGCAGAACAGACTGTGAATCCAAAACTTGCACA | + |
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Preference number: 5 (lower is better) Translates to: ATCPELFSLKWPRML*GSFSRTDCESKTCT Trigger: TGTGCAAGTTTTGGATTCACAGTCTGTTCTGCTGAAAGACCCTCAAAGCATCCTTGGCCACTTAAGTGAGAAGAGCTCTGGACAGGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087341.7 ENSMUST00000223776.2 ENSMUST00000223907.2 |
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| CDS-3UTR CAA 90 bp | AATGGAGAGACCGCCCATGCTCATGGATTGGCAGCACCAACAGTAAAGATGGCCTTAACACTGAGATCTTaGCACACTTTCTCATACTGT | + |
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Preference number: 5 (lower is better) Translates to: NGETAHAHGLAAPTVKMALTLRS*HTFSYC Trigger: ACAGTATGAGAAAGTGTGCAAAGATCTCAGTGTTAA...GGCCATCTTTACTGTTGGTGCTGCCAATCCATGAGCATGGGCGGTCTCTCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
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| CDS TCA 90 bp | CCCAAACTGTTTGCCGCAGGGTTTGAGGCGACTAAGGAAAACTCATaGGAGAGATCAAGCTTAACACCATCAAAATTGATTTCCAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: PKLFAAGFEATKENS*ERSSLTPSKLISKG Trigger: GCCTTTGGAAATCAATTTTGATGGTGTTAAGCTTGATCTCTCTCATGAGTTTTCCTTAGTCGCCTCAAACCCTGCGGCAAACAGTTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087341.7 ENSMUST00000223776.2 ENSMUST00000223907.2 |
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| CDS GCA 90 bp | GTGAAGATCAGTCGACTGTGTCCTTCTAAGAGGTCCTTTACTGGCTaGATAATGCAACCCAGAAAGAACTCTTTCTGTGAAGTTTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: VKISRLCPSKRSFTG*IMQPRKNSFCEVSG Trigger: ACCTGAAACTTCACAGAAAGAGTTCTTTCTGGGTTGCATTATGCAGCCAGTAAAGGACCTCTTAGAAGGACACAGTCGACTGATCTTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087341.7 ENSMUST00000223776.2 ENSMUST00000223907.2 |
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| CDS-3UTR CAA 90 bp | CACGCTCTTCTCTCCACTTCTGAAGCTCACTATTTTTCTCTGCCAGCTGTGCTGCACTTTCTCATACTGTaGTACAGCTTCTTCCATTTT | + |
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Preference number: 5 (lower is better) Translates to: HALLSTSEAHYFSLPAVLHFLIL*YSFFHF Trigger: AAAATGGAAGAAGCTGTACAACAGTATGAGAAAGTG...CAGCACAGCTGGCAGAGAAAAATAGTGAGCTTCAGAAGTGGAGAGAAGAGCGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223937.2 |
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| CDS GCA 90 bp | AGAGAGATCAAGCTTAACACCATCAAAATTGATTTCCAAAGGCCTTaGAATTGGGTCAGCACTAAAAACGTAAGACGGTCTAGGCACTCC | + |
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Preference number: 5 (lower is better) Translates to: REIKLNTIKIDFQRP*NWVSTKNVRRSRHS Trigger: GGAGTGCCTAGACCGTCTTACGTTTTTAGTGCTGACCCAATTGCAAGGCCTTTGGAAATCAATTTTGATGGTGTTAAGCTTGATCTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087341.7 ENSMUST00000223776.2 ENSMUST00000223907.2 |
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| CDS CCA 90 bp | ATCAAGCTTAACACCATCAAAATTGATTTCCAAAGGCCTTGCAATTaGGTCAGCACTAAAAACGTAAGACGGTCTAGGCACTCCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: IKLNTIKIDFQRPCN*VSTKNVRRSRHSIW Trigger: CCAGATGGAGTGCCTAGACCGTCTTACGTTTTTAGTGCTGACCCAATTGCAAGGCCTTTGGAAATCAATTTTGATGGTGTTAAGCTTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087341.7 ENSMUST00000223776.2 ENSMUST00000223907.2 |
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| CDS TCA 90 bp | TGCCTTGAAATGTATATGTTTTTCCAGAATTGGTCAGACCATATGTaGAGATCAGTCGACTGTGTCCTTCTAAGAGGTCCTTTACTGGCT | + |
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Preference number: 5 (lower is better) Translates to: CLEMYMFFQNWSDHM*RSVDCVLLRGPLLA Trigger: AGCCAGTAAAGGACCTCTTAGAAGGACACAGTCGACTGATCTTCACATATGGTCTGACCAATTCTGGAAAAACATATACATTTCAAGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087341.7 ENSMUST00000223776.2 ENSMUST00000223907.2 |
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| CDS-3UTR CAA 90 bp | CTGGACTGGTCACAACTGTTCACGGATTCTTCAAATTCTGGGATAGTCAAAGAGTATGTTTTTCCAGAATaGGTCAGACCATATGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: LDWSQLFTDSSNSGIVKEYVFPE*VRPYVK Trigger: CTTCACATATGGTCTGACCAATTCTGGAAAAACATA...CTCTTTGACTATCCCAGAATTTGAAGAATCCGTGAACAGTTGTGACCAGTCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225408.2 |
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| CDS TCA 90 bp | AGACTTGAAATGTATATGTTTTTCCAGAATTGGTCAGACCATATGTaGAGATCAGTCGACTGTGTCCTTCTAAGAGGTCCTTTACTGGCT | + |
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Preference number: 5 (lower is better) Translates to: RLEMYMFFQNWSDHM*RSVDCVLLRGPLLA Trigger: AGCCAGTAAAGGACCTCTTAGAAGGACACAGTCGACTGATCTTCACATATGGTCTGACCAATTCTGGAAAAACATATACATTTCAAGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225408.2 |
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| CDS CCA 90 bp | GAAACCCACACAGAATACTTTATATTATCCACATTCAGACTGGACTaGTCACAACTGTTCACGGATTCTTCAAATTCTGGGATAGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: ETHTEYFILSTFRLD*SQLFTDSSNSGIVK Trigger: TTTGACTATCCCAGAATTTGAAGAATCCGTGAACAGTTGTGACCAGTCCAGTCTGAATGTGGATAATATAAAGTATTCTGTGTGGGTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087341.7 ENSMUST00000223907.2 |
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| CDS TCA 90 bp | CTACATCTGTGTGGTTTGAAGCTCATCTTCGTATATAGTCTTTCCTaGAGACTATCAAACAATACATTCAGTGTTCTAGGCAAAATACCA | + |
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Preference number: 5 (lower is better) Translates to: LHLCGLKLIFVYSLS*RLSNNTFSVLGKIP Trigger: TGGTATTTTGCCTAGAACACTGAATGTATTGTTTGATAGTCTTCAGGAAAGACTATATACGAAGATGAGCTTCAAACCACACAGATGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087341.7 ENSMUST00000223776.2 ENSMUST00000223907.2 |
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| CDS TCA 72 bp | AAGGATGCTTTGAGGGTCTTTCAGCAGAACAGACTGTaGATCCAAAACTTGCACACAGCCCTCAGCCTCATG | + |
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Preference number: 6 (lower is better) Translates to: KDALRVFQQNRL*IQNLHTALSLM Trigger: CATGAGGCTGAGGGCTGTGTGCAAGTTTTGGATTCACAGTCTGTTCTGCTGAAAGACCCTCAAAGCATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087341.7 ENSMUST00000223776.2 ENSMUST00000223907.2 |
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| CDS GCA 72 bp | CCTGTCCAGAGCTCTTCTCACTTAAGTGGCCAAGGATaGTTTGAGGGTCTTTCAGCAGAACAGACTGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: PVQSSSHLSGQG*FEGLSAEQTVN Trigger: ATTCACAGTCTGTTCTGCTGAAAGACCCTCAAAGCATCCTTGGCCACTTAAGTGAGAAGAGCTCTGGACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087341.7 ENSMUST00000223776.2 ENSMUST00000223907.2 |
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| CDS CCA 72 bp | AACACCATCAAAATTGATTTCCAAAGGCCTTGCAATTaGGTCAGCACTAAAAACGTAAGACGGTCTAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: NTIKIDFQRPCN*VSTKNVRRSRH Trigger: GTGCCTAGACCGTCTTACGTTTTTAGTGCTGACCCAATTGCAAGGCCTTTGGAAATCAATTTTGATGGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087341.7 ENSMUST00000223776.2 ENSMUST00000223907.2 |
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| CDS TCA 72 bp | ATGTATATGTTTTTCCAGAATTGGTCAGACCATATGTaGAGATCAGTCGACTGTGTCCTTCTAAGAGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: MYMFFQNWSDHM*RSVDCVLLRGP Trigger: AGGACCTCTTAGAAGGACACAGTCGACTGATCTTCACATATGGTCTGACCAATTCTGGAAAAACATATACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000087341.7 ENSMUST00000223776.2 ENSMUST00000223907.2 ENSMUST00000225408.2 |
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| CDS GCA 72 bp | AAGCTTAACACCATCAAAATTGATTTCCAAAGGCCTTaGAATTGGGTCAGCACTAAAAACGTAAGACGGTCT | + |
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Preference number: 6 (lower is better) Translates to: KLNTIKIDFQRP*NWVSTKNVRRS Trigger: AGACCGTCTTACGTTTTTAGTGCTGACCCAATTGCAAGGCCTTTGGAAATCAATTTTGATGGTGTTAAGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087341.7 ENSMUST00000223776.2 ENSMUST00000223907.2 |
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| CDS CAA 72 bp | ACATTGATACACTTTCCCAGAGTCAATAAAGAAGTGTaGATATTCCCAGCCTCTCTTAACCTTTCACCTTCG | + |
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Preference number: 6 (lower is better) Translates to: TLIHFPRVNKEV*IFPASLNLSPS Trigger: CGAAGGTGAAAGGTTAAGAGAGGCTGGGAATATCAACACTTCTTTATTGACTCTGGGAAAGTGTATCAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087341.7 ENSMUST00000223907.2 |
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| CDS CAA 90 bp | TTCTTCAAAACATTGATACACTTTCCCAGAGTCAATAAAGAAGTGTaGATATTCCCAGCCTCTCTTAACCTTTCACCTTCGTTTTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: FFKTLIHFPRVNKEV*IFPASLNLSPSFCV Trigger: GACACAAAACGAAGGTGAAAGGTTAAGAGAGGCTGGGAATATCAACACTTCTTTATTGACTCTGGGAAAGTGTATCAATGTTTTGAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087341.7 ENSMUST00000223907.2 |
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