RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF18B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000051378

Ensembl transcript IDs: ENSMUST00000021311.10

Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp CAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGCAGAGCCCTGTaGTCAGACATGAAGCTGAGGGGTAAAGGACAGAGCCCAAGAGTC +
Preference number: 2 (lower is better)
Translates to: QQPSCPHPPSLCRAL*SDMKLRGKGQSPRV
Trigger: GACTCTTGGGCTCTGTCCTTTACCCCTCAGCTTCATGTCTGACAACAGGGCTCTGCACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
3UTR-3UTR GCA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGAGCCCAAGAGTCCCCTaGTTCTGTGGAAGGCTTTGG +
Preference number: 2 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVSPRVP*FCGRLW
Trigger: CCAAAGCCTTCCACAGAAGCAGGGGACTCTTGGGCT...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
3UTR CAA 90 bp TGTTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTaGTCCTCATCCACCTTCACTGTGCAGAGCCCTGTTGTCAGACAT +
Preference number: 2 (lower is better)
Translates to: CLAPGELSRHLSATL*SSSTFTVQSPVVRH
Trigger: ATGTCTGACAACAGGGCTCTGCACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
3UTR CAA 90 bp TCTGAATGTATGCTGTGTTTAGCACCAGGAGAGCTAAGCCGGCATTaGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGCAGAGC +
Preference number: 2 (lower is better)
Translates to: SECMLCLAPGELSRH*SATLLSSSTFTVQS
Trigger: GCTCTGCACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAACACAGCATACATTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
3UTR-3UTR TCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTTTAATTGCTCCAAGGTaGGGAAGGCAGGCTAGGGAC +
Preference number: 2 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFLIAPR*GRQARD
Trigger: GTCCCTAGCCTGCCTTCCTCACCTTGGAGCAATTAA...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
3UTR-3UTR TCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTGGAAGGCTTTGGGAATaGGAAACCCTGACAGGATCC +
Preference number: 2 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFGRLWE*ETLTGS
Trigger: GGATCCTGTCAGGGTTTCTCATTCCCAAAGCCTTCC...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
3UTR-3UTR CCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTAGGCAAATAGACAAGTaGTTGGGGAGGGGTGTTAAC +
Preference number: 2 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFRQIDK*LGRGVN
Trigger: GTTAACACCCCTCCCCAACCACTTGTCTATTTGCCT...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
3UTR-3UTR CAA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCCAAATAGACAAGTGGTaGGGGAGGGGTGTTAACAGA +
Preference number: 3 (lower is better)
Translates to: PGELSRHLSATLLSSSTFQIDKW*GRGVNR
Trigger: TCTGTTAACACCCCTCCCCAACCACTTGTCTATTTG...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
3UTR-3UTR CAA 90 bp CCTAAGGCTCTATCCTCACAGTCCCCTCTCTCCTTACATTCTGAATGTATGCTGCTGTGCAGAGCCCTGTaGTCAGACATGAAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: PKALSSQSPLSLHSECMLLCRAL*SDMKLR
Trigger: CCTCAGCTTCATGTCTGACAACAGGGCTCTGCACAG...CAGCATACATTCAGAATGTAAGGAGAGAGGGGACTGTGAGGATAGAGCCTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
3UTR TCA 72 bp CCAAGAGTCCCCTGCTTCTGTGGAAGGCTTTGGGAATaGGAAACCCTGACAGGATCCTTTAATACAGCCACA +
Preference number: 3 (lower is better)
Translates to: PRVPCFCGRLWE*ETLTGSFNTAT
Trigger: TGTGGCTGTATTAAAGGATCCTGTCAGGGTTTCTCATTCCCAAAGCCTTCCACAGAAGCAGGGGACTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
3UTR TCA 72 bp GGCTCTATCCTCACAGTCCCCTCTCTCCTTACATTCTaGATGTATGCTGTGTTTAGCACCAGGAGAGCTAAG +
Preference number: 3 (lower is better)
Translates to: GSILTVPSLLTF*MYAVFSTRRAK
Trigger: CTTAGCTCTCCTGGTGCTAAACACAGCATACATTCAGAATGTAAGGAGAGAGGGGACTGTGAGGATAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GCCCTGTTGTCAGACATGAAGCTGAGGGGTAAAGGACAGAGCCCAAGAGTCCCCTGGCGTTGGCATCCGTaGGGTGCTGTGTGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: ALLSDMKLRGKGQSPRVPWRWHP*GAVCGY
Trigger: GTAGCCGCACACAGCACCCCACGGATGCCAACGCCA...GGGGACTCTTGGGCTCTGTCCTTTACCCCTCAGCTTCATGTCTGACAACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR TCA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCTGGTGGTCAGGTACATaGTGCCGGGCTCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PGELSRHLSATLLSSSTFWWSGT*CRALPP
Trigger: GGGAGGGAGAGCCCGGCATCATGTACCTGACCACCA...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGTCGGGGCTGGTAGGCTaGCTGGCTCTTCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVSGLVG*LALRGS
Trigger: TGACCCCCGAAGAGCCAGGCAGCCTACCAGCCCCGA...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCGGGAGGATGTGGCGTTaGCATCCGTGGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: PGELSRHLSATLLSSSTFGRMWR*HPWGAV
Trigger: CACAGCACCCCACGGATGCCAACGCCACATCCTCCC...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GCCCTGTTGTCAGACATGAAGCTGAGGGGTAAAGGACAGAGCCCAAGAGTCCCCTCTAGGGTAGAGGACTaGCTGGAGGGCCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ALLSDMKLRGKGQSPRVPSRVED*LEGPGC
Trigger: ACAGCCTGGGCCCTCCAGCCAGTCCTCTACCCTAGA...GGGGACTCTTGGGCTCTGTCCTTTACCCCTCAGCTTCATGTCTGACAACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCCTAGTGGGTCCCCTCTaGCCAGAGCAGGAGACCTGG +
Preference number: 4 (lower is better)
Translates to: PGELSRHLSATLLSSSTFLVGPL*PEQETW
Trigger: CCAGGTCTCCTGCTCTGGCCAGAGGGGACCCACTAG...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR TCA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGCTGTCCCTGGGCGTCTaGTCCCAGGCTCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVLSLGV*SQALLL
Trigger: CAAGAGGAGAGCCTGGGATCAGACGCCCAGGGACAG...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGCTCCTTTGGCATGGGTaGTGGATGCCCGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVLLWHG*WMPARS
Trigger: GCTCCGAGCGGGCATCCAGCACCCATGCCAAAGGAG...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGGCAGCCGCTCTCCTTTaGCATGGGTGCTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVAAALL*HGCWMP
Trigger: GGGCATCCAGCACCCATGCCAAAGGAGAGCGGCTGC...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GCCCTGTTGTCAGACATGAAGCTGAGGGGTAAAGGACAGAGCCCAAGAGTCCCCCAACGTGGGAGGCTGTaGAGAGCACTGCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ALLSDMKLRGKGQSPRVPQRGRL*RALLLQ
Trigger: CTGCAACAGCAGTGCTCTCCACAGCCTCCCACGTTG...GGGGACTCTTGGGCTCTGTCCTTTACCCCTCAGCTTCATGTCTGACAACAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp CCTAAGGCTCTATCCTCACAGTCCCCTCTCTCCTTACATTCTGAATGTATGCTGGGCATGGGTGCTGGATaGCCGCTCGGAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PKALSSQSPLSLHSECMLGMGAG*PLGASQ
Trigger: CTGGCTGGCTCCGAGCGGGCATCCAGCACCCATGCC...CAGCATACATTCAGAATGTAAGGAGAGAGGGGACTGTGAGGATAGAGCCTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCCAGCAATCATCACTGTaGGGCAGTTGCCCCCGATGG +
Preference number: 4 (lower is better)
Translates to: PGELSRHLSATLLSSSTFQQSSL*GSCPRW
Trigger: CCATCGGGGGCAACTGCCGCACAGTGATGATTGCTG...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCGGCCTGGGTCAGTCCTaGAACCCGGTCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLIGLGQS*NPVLLL
Trigger: AAGCAGCAGGACCGGGTTCCAGGACTGACCCAGGCC...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCGCTACTCGAAGGGCCTaGGTCAGTCCTGGAACCCGG +
Preference number: 4 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLIATRRA*VSPGTR
Trigger: CCGGGTTCCAGGACTGACCCAGGCCCTTCGAGTAGC...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GCCCTGTTGTCAGACATGAAGCTGAGGGGTAAAGGACAGAGCCCAAGAGTCCCCAGGCCCTCTCTCTTTTaGGAGTTCTCGGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: ALLSDMKLRGKGQSPRVPRPSLF*EFSAQS
Trigger: GCTCTGAGCCGAGAACTCCCAAAAGAGAGAGGGCCT...GGGGACTCTTGGGCTCTGTCCTTTACCCCTCAGCTTCATGTCTGACAACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR TCA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCATCTGGAAAATGGCATaGGAGCGGGAGGATGTGGCG +
Preference number: 4 (lower is better)
Translates to: PGELSRHLSATLLSSSTFIWKMA*EREDVA
Trigger: CGCCACATCCTCCCGCTCTCATGCCATTTTCCAGAT...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR TCA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGATCCTGTTTCTGTGGTaGGTGTTGGCCCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVILFLW*VLARAW
Trigger: CCAGGCACGGGCCAACACTCACCACAGAAACAGGAT...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACCTCAGCCTGGAGCTaGTGGCAGATGGTGGCATAT +
Preference number: 4 (lower is better)
Translates to: PGELSRHLSATLLSSSTFTSAWS*WQMVAY
Trigger: ATATGCCACCATCTGCCAGCAGCTCCAGGCTGAGGT...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGAGGAGGTTGGCTGCCTaGAGCAGGGAGTATTGTCGC +
Preference number: 4 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVRRLAA*SREYCR
Trigger: GCGACAATACTCCCTGCTGCAGGCAGCCAACCTCCT...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GCCCTGTTGTCAGACATGAAGCTGAGGGGTAAAGGACAGAGCCCAAGAGTCCCCAATTGCTTTTCTTCCTaGCGGGCTTCCAGACGCCTG +
Preference number: 4 (lower is better)
Translates to: ALLSDMKLRGKGQSPRVPNCFSS*RASRRL
Trigger: CAGGCGTCTGGAAGCCCGCCAGGAAGAAAAGCAATT...GGGGACTCTTGGGCTCTGTCCTTTACCCCTCAGCTTCATGTCTGACAACAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCCTCTGGCTTCTGGGTTaGACACTGTTTGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGELSRHLSATLLSSSTFLWLLG*TLFVLG
Trigger: CCCCAGGACAAACAGTGTCCAACCCAGAAGCCAGAG...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
3UTR CAA 72 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTaGTCCTCATCCACCTTCACTGTGCAGAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PGELSRHLSATL*SSSTFTVQSPV
Trigger: AACAGGGCTCTGCACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR TCA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGGTGGCTCTGGGACAGTaGAGGGTCTGTTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVVALGQ*RVCLAS
Trigger: AGAAGCCAAACAGACCCTTCACTGTCCCAGAGCCAC...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGCCTGGAACCCGGTCCTaGTGCTTCACAAAGATCTGG +
Preference number: 4 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVPGTRS*CFTKIW
Trigger: CCAGATCTTTGTGAAGCAGCAGGACCGGGTTCCAGG...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp CCTAAGGCTCTATCCTCACAGTCCCCTCTCTCCTTACATTCTGAATGTATGCTGGACGGGCAATACAGCTaGGGCCTCGGGAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: PKALSSQSPLSLHSECMLDGQYS*GLGRLR
Trigger: CCTCAGTCTCCCGAGGCCGCAGCTGTATTGCCCGTC...CAGCATACATTCAGAATGTAAGGAGAGAGGGGACTGTGAGGATAGAGCCTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp CCTAAGGCTCTATCCTCACAGTCCCCTCTCTCCTTACATTCTGAATGTATGCTGGAGAGCGGGAGGATGTaGCGTTGGCATCCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PKALSSQSPLSLHSECMLESGRM*RWHPWG
Trigger: ACCCCACGGATGCCAACGCCACATCCTCCCGCTCTC...CAGCATACATTCAGAATGTAAGGAGAGAGGGGACTGTGAGGATAGAGCCTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCTGCTGTTGCAGGGCCTaGGCTCCAGCCTCATACATC +
Preference number: 4 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLICCCRA*APASYI
Trigger: GATGTATGAGGCTGGAGCCCAGGCCCTGCAACAGCA...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GCCCTGTTGTCAGACATGAAGCTGAGGGGTAAAGGACAGAGCCCAAGAGTCCCCGCTAGAAAGGCTTTGTaGAATGCTCAACGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ALLSDMKLRGKGQSPRVPARKAL*NAQRGR
Trigger: CCTCCCACGTTGAGCATTCCACAAAGCCTTTCTAGC...GGGGACTCTTGGGCTCTGTCCTTTACCCCTCAGCTTCATGTCTGACAACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GCCCTGTTGTCAGACATGAAGCTGAGGGGTAAAGGACAGAGCCCAAGAGTCCCCGCCAACTGTTTGGAGTaGTCCGCATCCTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: ALLSDMKLRGKGQSPRVPANCLE*SASCFC
Trigger: ACAGAAACAGGATGCGGACCACTCCAAACAGTTGGC...GGGGACTCTTGGGCTCTGTCCTTTACCCCTCAGCTTCATGTCTGACAACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp CCTAAGGCTCTATCCTCACAGTCCCCTCTCTCCTTACATTCTGAATGTATGCTGCCAGAGCAGGAGACCTaGGGCTCTCAGCCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PKALSSQSPLSLHSECMLPEQET*GSQPCG
Trigger: ACCACAGGGCTGAGAGCCCCAGGTCTCCTGCTCTGG...CAGCATACATTCAGAATGTAAGGAGAGAGGGGACTGTGAGGATAGAGCCTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp CCTAAGGCTCTATCCTCACAGTCCCCTCTCTCCTTACATTCTGAATGTATGCTGCAGGGGAGGAAGGACTaGCGCTGGCGCTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: PKALSSQSPLSLHSECMLQGRKD*RWRFIS
Trigger: GGAGATGAAGCGCCAGCGCCAGTCCTTCCTCCCCTG...CAGCATACATTCAGAATGTAAGGAGAGAGGGGACTGTGAGGATAGAGCCTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCCTGGAAGCTGGGTTTaGAGGGGGACTCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLIPGSWV*RGTPQR
Trigger: TCTCTGAGGAGTCCCCCTCCAAACCCAGCTTCCAGG...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCTGGTCATCAAGGCAGTaGGGGCTCAAGGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLIWSSRQ*GLKGGS
Trigger: AGAGCCACCCTTGAGCCCCCACTGCCTTGATGACCA...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR TCA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCTCAGGCTGGAAGGGCTaGTGGCAGCAATCATCACTG +
Preference number: 4 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLISGWKG*WQQSSL
Trigger: CAGTGATGATTGCTGCCATCAGCCCTTCCAGCCTGA...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR TCA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGTGTGATGGTCCACGCTaGTCACATTGCTCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVCDGPR*SHCSSA
Trigger: CGCTGAAGAGCAATGTGATCAGCGTGGACCATCACA...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR TCA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCCAGGGTCTCAAACTCTaGGATCATGTCAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PGELSRHLSATLLSSSTFQGLKL*DHVRSQ
Trigger: CTGACTCCTGACATGATCTCAGAGTTTGAGACCCTG...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCATGAGCACCTCGAATTaGTTTTCTTCCTGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PGELSRHLSATLLSSSTFMSTSN*FSSWRA
Trigger: AGCCCGCCAGGAAGAAAAGCAATTCGAGGTGCTCAT...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCAGACTTGCGGCCCTTTaGATCAGCCAGGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLIRLAAL*ISQGIE
Trigger: CTCAATGCCCTGGCTGATGCAAAGGGCCGCAAGTCT...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCTCGAGCACTAGTTGCTaGAGGGTCTCAAACTCTGAG +
Preference number: 4 (lower is better)
Translates to: PGELSRHLSATLLSSSTFSSTSC*RVSNSE
Trigger: CTCAGAGTTTGAGACCCTGCAGCAACTAGTGCTCGA...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCCGAGGATGTTGTGTGTaGTGTGCTGGAACACATCCT +
Preference number: 4 (lower is better)
Translates to: PGELSRHLSATLLSSSTFRGCCV*CAGTHP
Trigger: AGGATGTGTTCCAGCACACCACACACAACATCCTCG...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTCTTTGGCATGGGTGCTaGATGCCCGCTCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFLWHGC*MPARSQ
Trigger: CTGGCTCCGAGCGGGCATCCAGCACCCATGCCAAAG...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTCGCTCTCCTTTGGCATaGGTGCTGGATGCCCGCTCG +
Preference number: 4 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFRSPLA*VLDARS
Trigger: CGAGCGGGCATCCAGCACCCATGCCAAAGGAGAGCG...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCCCAGCCTCATACATCTaGAGTTTCTCCCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PGELSRHLSATLLSSSTFPASYI*SFSLRK
Trigger: CTTCCTGAGGGAGAAACTCCAGATGTATGAGGCTGG...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCAGGAAGGACTGGCGCTaGCGCTTCATCTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLIRKDWR*RFISRF
Trigger: GAATCTGGAGATGAAGCGCCAGCGCCAGTCCTTCCT...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGGTAGGGCCAGAGGAGTaGAACAGTTCTGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVVGPEE*NSSVRQ
Trigger: CTGCCTTACAGAACTGTTCCACTCCTCTGGCCCTAC...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTGTGGGGGCTCAAGGGTaGCTCTGGGACAGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFVGAQG*LWDSEG
Trigger: CCCTTCACTGTCCCAGAGCCACCCTTGAGCCCCCAC...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR TCA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACACTGCTCCTGCTCTaGAGCACTTTCTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: PGELSRHLSATLLSSSTFTLLLL*STFFHN
Trigger: ATTGTGGAAGAAAGTGCTTCAGAGCAGGAGCAGTGT...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGGGAACCCGGTCCTGCTaGTTCACAAAGATCTGGAAA +
Preference number: 4 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVGTRSC*FTKIWK
Trigger: TTTCCAGATCTTTGTGAAGCAGCAGGACCGGGTTCC...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCTGGGGACACTGCTCCTaGTCTGAAGCACTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLIWGHCS*SEALSS
Trigger: GGAAGAAAGTGCTTCAGAGCAGGAGCAGTGTCCCCA...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCTTGTCCTGGGGACACTaGTCCTGCTCTGAAGCACTT +
Preference number: 4 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLILSWGH*SCSEAL
Trigger: AAGTGCTTCAGAGCAGGAGCAGTGTCCCCAGGACAA...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCGAATATGAAGACAGGTaGGCTGGGGAGAAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLIEYEDR*AGEKGL
Trigger: CAGCCCTTTCTCCCCAGCGCACCTGTCTTCATATTC...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGTTGGCTTCTTCAAGGTaGTACTGTGGAGACGGGCAA +
Preference number: 4 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVLASSR*YCGDGQ
Trigger: TTGCCCGTCTCCACAGTAGCACCTTGAAGAAGCCAA...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTGCTGAGGCTGGCTGGTaGAAAGAAAGTCCCGGCACC +
Preference number: 4 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFAEAGW*KESPGT
Trigger: GGTGCCGGGACTTTCTTTCCACCAGCCAGCCTCAGC...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTTCGGCTGAGGCTGGCTaGTGGAAAGAAAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFSAEAG*WKESPG
Trigger: GCCGGGACTTTCTTTCCACCAGCCAGCCTCAGCCGA...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCCAAAGATCTGGAAAATaGCATGAGAGCGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: PGELSRHLSATLLSSSTFQRSGK*HESGRM
Trigger: CATCCTCCCGCTCTCATGCCATTTTCCAGATCTTTG...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCTCAGTTGCTTTGCCATaGTCCTGGTCACTGGACCAC +
Preference number: 4 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLISVALP*SWSLDH
Trigger: GTGGTCCAGTGACCAGGACCATGGCAAAGCAACTGA...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCAAATTCCTGGAAGCTaGGTTTGGAGGGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLIQIPGS*VWRGTP
Trigger: AGGAGTCCCCCTCCAAACCCAGCTTCCAGGAATTTG...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGCAGTCAACAAATTCCTaGAAGCTGGGTTTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVQSTNS*KLGLEG
Trigger: CCCCTCCAAACCCAGCTTCCAGGAATTTGTTGACTG...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR TCA 90 bp CCTAAGGCTCTATCCTCACAGTCCCCTCTCTCCTTACATTCTGAATGTATGCTGTCTTCTTGCTGGCAGTaGCTGCAGGAAGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PKALSSQSPLSLHSECMLSSCWQ*LQEAKA
Trigger: AGCCTTCGCTTCCTGCAGTCACTGCCAGCAAGAAGA...CAGCATACATTCAGAATGTAAGGAGAGAGGGGACTGTGAGGATAGAGCCTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCACACATCCTCCTGAGTaGCCATCTCACCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLITHPPE*PSHQRH
Trigger: GTGTCTTTGGTGAGATGGCCACTCAGGAGGATGTGT...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GCCCTGTTGTCAGACATGAAGCTGAGGGGTAAAGGACAGAGCCCAAGAGTCCCCTCCTTGGTAGGCTTTTaGAATGTCTTATCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: ALLSDMKLRGKGQSPRVPSLVGF*NVLSEV
Trigger: CACCTCAGATAAGACATTCCAAAAGCCTACCAAGGA...GGGGACTCTTGGGCTCTGTCCTTTACCCCTCAGCTTCATGTCTGACAACAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTTTTAATGACCGTGGCTaGGCAGACTCGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFFNDRG*ADSGGG
Trigger: CCCTCCTCCCGAGTCTGCCCAGCCACGGTCATTAAA...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
3UTR CAA 72 bp ATGCTGTGTTTAGCACCAGGAGAGCTAAGCCGGCATTaGTCAGCAACCCTCTTGTCCTCATCCACCTTCACT +
Preference number: 4 (lower is better)
Translates to: MLCLAPGELSRH*SATLLSSSTFT
Trigger: AGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAACACAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR TCA 90 bp CCTAAGGCTCTATCCTCACAGTCCCCTCTCTCCTTACATTCTGAATGTATGCTGTGGAACACATCCTCCTaGGTGGCCATCTCACCAAAG +
Preference number: 4 (lower is better)
Translates to: PKALSSQSPLSLHSECMLWNTSS*VAISPK
Trigger: CTTTGGTGAGATGGCCACTCAGGAGGATGTGTTCCA...CAGCATACATTCAGAATGTAAGGAGAGAGGGGACTGTGAGGATAGAGCCTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTAGCATCTCAAGTAACTaGTCGGCTGAGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFSISSN*SAEAGW
Trigger: CCAGCCAGCCTCAGCCGAGCAGTTACTTGAGATGCT...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTTCAGCCTGGAGCTGCTaGCAGATGGTGGCATATTGG +
Preference number: 4 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFSAWSC*QMVAYW
Trigger: CCAATATGCCACCATCTGCCAGCAGCTCCAGGCTGA...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTGCTCAAGGGTGGCTCTaGGACAGTGAAGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFAQGWL*DSEGSV
Trigger: AACAGACCCTTCACTGTCCCAGAGCCACCCTTGAGC...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTCCTTTAGGAGTCCTCTaGTCATCAAGGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFPLGVL*SSRQWG
Trigger: CCCCCACTGCCTTGATGACCAGAGGACTCCTAAAGG...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTCTTTGCCCTTCTTCTTaGGGCCATTGTGGGAACCAC +
Preference number: 4 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFLCPSS*GHCGNH
Trigger: GTGGTTCCCACAATGGCCCCAAGAAGAAGGGCAAAG...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR TCA 90 bp CCTAAGGCTCTATCCTCACAGTCCCCTCTCTCCTTACATTCTGAATGTATGCTGCCCAGGCTCTCCTCTTaGAGAGTTTCATTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: PKALSSQSPLSLHSECMLPRLSS*RVSFFA
Trigger: TGCAAAGAATGAAACTCTTCAAGAGGAGAGCCTGGG...CAGCATACATTCAGAATGTAAGGAGAGAGGGGACTGTGAGGATAGAGCCTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR GCA 90 bp CCTAAGGCTCTATCCTCACAGTCCCCTCTCTCCTTACATTCTGAATGTATGCTGCAAATGTCAGGTCTTTaGCCTTCTTCTTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PKALSSQSPLSLHSECMLQMSGL*PSSWGH
Trigger: ATGGCCCCAAGAAGAAGGGCAAAGACCTGACATTTG...CAGCATACATTCAGAATGTAAGGAGAGAGGGGACTGTGAGGATAGAGCCTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR TCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTCACGGTCAGCATATTTaGGGGTGTTGTAAGTATCCT +
Preference number: 4 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFHGQHI*GCCKYP
Trigger: AGGATACTTACAACACCCTCAAATATGCTGACCGTG...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CCA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTAGTGAAGGGTCTGTTTaGCTTCTTCAAGGTGCTACT +
Preference number: 4 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFSEGSV*LLQGAT
Trigger: AGTAGCACCTTGAAGAAGCCAAACAGACCCTTCACT...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 90 bp GCTGCCTGCAGCAGGGAGTATTGTCGCTGGGCCAGGCGGAGCACCTaGAGGGCCAACTGTTTGGAGTGGTCCGCATCCTGTTTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: AACSREYCRWARRST*RANCLEWSASCFCG
Trigger: ACCACAGAAACAGGATGCGGACCACTCCAAACAGTTGGCCCTCCAGGTGCTCCGCCTGGCCCAGCGACAATACTCCCTGCTGCAGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 90 bp GGGTCCCCTCTGGCCAGAGCAGGAGACCTGGGGCTCTCAGCCCTGTaGTCAACGCTTTCCTCGAGCACTAGTTGCTGCAGGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GSPLARAGDLGLSAL*STLSSSTSCCRVSN
Trigger: GTTTGAGACCCTGCAGCAACTAGTGCTCGAGGAAAGCGTTGACCACAGGGCTGAGAGCCCCAGGTCTCCTGCTCTGGCCAGAGGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 90 bp ACAGCGCCTGAGCTAGTGGGTCCCCTCTGGCCAGAGCAGGAGACCTaGGGCTCTCAGCCCTGTGGTCAACGCTTTCCTCGAGCACTAGTT +
Preference number: 5 (lower is better)
Translates to: TAPELVGPLWPEQET*GSQPCGQRFPRALV
Trigger: AACTAGTGCTCGAGGAAAGCGTTGACCACAGGGCTGAGAGCCCCAGGTCTCCTGCTCTGGCCAGAGGGGACCCACTAGCTCAGGCGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 90 bp GGAGAGCACTGCTGTTGCAGGGCCTGGGCTCCAGCCTCATACATCTaGAGTTTCTCCCTCAGGAAGGCTACCTCAGCCTGGAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GEHCCCRAWAPASYI*SFSLRKATSAWSCW
Trigger: CCAGCAGCTCCAGGCTGAGGTAGCCTTCCTGAGGGAGAAACTCCAGATGTATGAGGCTGGAGCCCAGGCCCTGCAACAGCAGTGCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp GCCCTGTTGTCAGACATGAAGCTGAGGGGTAAAGGACAGAGCCCAAGAGTCCCCCGGGAGGATGTGGCGTaGGCATCCGTGGGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: ALLSDMKLRGKGQSPRVPREDVA*ASVGCC
Trigger: ACAGCACCCCACGGATGCCAACGCCACATCCTCCCG...GGGGACTCTTGGGCTCTGTCCTTTACCCCTCAGCTTCATGTCTGACAACAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 90 bp CTTTGCCTGTACACTTGGACTAGGGGACCCGGGCAGGTTCGGCTCTaGCTTCTGGGTTGGACACTGTTTGTCCTGGGGACACTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: LCLYTWTRGPGQVRL*LLGWTLFVLGTLLL
Trigger: CAGGAGCAGTGTCCCCAGGACAAACAGTGTCCAACCCAGAAGCCAGAGCCGAACCTGCCCGGGTCCCCTAGTCCAAGTGTACAGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 90 bp AGGATGTGGCGTTGGCATCCGTGGGGTGCTGTGTGCGGCTACAGTTaGCTCTTGTCAGCATCTCAAGTAACTGCTCGGCTGAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: RMWRWHPWGAVCGYS*LLSASQVTARLRLA
Trigger: AGCCAGCCTCAGCCGAGCAGTTACTTGAGATGCTGACAAGAGGCAACTGTAGCCGCACACAGCACCCCACGGATGCCAACGCCACATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 90 bp CATGAGAGCGGGAGGATGTGGCGTTGGCATCCGTGGGGTGCTGTGTaGGGCTACAGTTGCCTCTTGTCAGCATCTCAAGTAACTGCTCGG +
Preference number: 5 (lower is better)
Translates to: HESGRMWRWHPWGAV*GYSCLLSASQVTAR
Trigger: CCGAGCAGTTACTTGAGATGCTGACAAGAGGCAACTGTAGCCGCACACAGCACCCCACGGATGCCAACGCCACATCCTCCCGCTCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 90 bp TCTGGGACAGTGAAGGGTCTGTTTGGCTTCTTCAAGGTGCTACTGTaGAGACGGGCAATACAGCTGCGGCCTCGGGAGACTGAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SGTVKGLFGFFKVLL*RRAIQLRPRETEGL
Trigger: GAGGCCCTCAGTCTCCCGAGGCCGCAGCTGTATTGCCCGTCTCCACAGTAGCACCTTGAAGAAGCCAAACAGACCCTTCACTGTCCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 90 bp GCAGTGGGGGCTCAAGGGTGGCTCTGGGACAGTGAAGGGTCTGTTTaGCTTCTTCAAGGTGCTACTGTGGAGACGGGCAATACAGCTGCG +
Preference number: 5 (lower is better)
Translates to: AVGAQGWLWDSEGSV*LLQGATVETGNTAA
Trigger: CGCAGCTGTATTGCCCGTCTCCACAGTAGCACCTTGAAGAAGCCAAACAGACCCTTCACTGTCCCAGAGCCACCCTTGAGCCCCCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGTGGAGAGCACTGCTGTaGCAGGGCCTGGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVWRALL*QGLGSS
Trigger: GCTGGAGCCCAGGCCCTGCAACAGCAGTGCTCTCCA...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS TCA 90 bp TCTGGTCATCAAGGCAGTGGGGGCTCAAGGGTGGCTCTGGGACAGTaGAGGGTCTGTTTGGCTTCTTCAAGGTGCTACTGTGGAGACGGG +
Preference number: 5 (lower is better)
Translates to: SGHQGSGGSRVALGQ*RVCLASSRCYCGDG
Trigger: CCCGTCTCCACAGTAGCACCTTGAAGAAGCCAAACAGACCCTTCACTGTCCCAGAGCCACCCTTGAGCCCCCACTGCCTTGATGACCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 90 bp CTTTGTGGAATGCTCAACGTGGGAGGCTGTGGAGAGCACTGCTGTTaGAGGGCCTGGGCTCCAGCCTCATACATCTGGAGTTTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: LCGMLNVGGCGEHCC*RAWAPASYIWSFSL
Trigger: GAGGGAGAAACTCCAGATGTATGAGGCTGGAGCCCAGGCCCTGCAACAGCAGTGCTCTCCACAGCCTCCCACGTTGAGCATTCCACAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 90 bp TCAGGTGCGAGTGGGGCCCCCAGAGTGTGTGTGAGACCATTCAGTTaGTTTGCCATGGTCCTGGTCACTGGACCACAGTACCCTGAAGAC +
Preference number: 5 (lower is better)
Translates to: SGASGAPRVCVRPFS*FAMVLVTGPQYPED
Trigger: GTCTTCAGGGTACTGTGGTCCAGTGACCAGGACCATGGCAAAGCAACTGAATGGTCTCACACACACTCTGGGGGCCCCACTCGCACCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 90 bp GCTGCTTCACAAAGATCTGGAAAATGGCATGAGAGCGGGAGGATGTaGCGTTGGCATCCGTGGGGTGCTGTGTGCGGCTACAGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: AASQRSGKWHESGRM*RWHPWGAVCGYSCL
Trigger: GAGGCAACTGTAGCCGCACACAGCACCCCACGGATGCCAACGCCACATCCTCCCGCTCTCATGCCATTTTCCAGATCTTTGTGAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 90 bp GAGCCAGCCAGGTCAATCAAGCTCATCTTGGCTACTCGAAGGGCCTaGGTCAGTCCTGGAACCCGGTCCTGCTGCTTCACAAAGATCTGG +
Preference number: 5 (lower is better)
Translates to: EPARSIKLILATRRA*VSPGTRSCCFTKIW
Trigger: CCAGATCTTTGTGAAGCAGCAGGACCGGGTTCCAGGACTGACCCAGGCCCTTCGAGTAGCCAAGATGAGCTTGATTGACCTGGCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 90 bp CGAGGAGCTAGAAAGGCTTTGTGGAATGCTCAACGTGGGAGGCTGTaGAGAGCACTGCTGTTGCAGGGCCTGGGCTCCAGCCTCATACAT +
Preference number: 5 (lower is better)
Translates to: RGARKALWNAQRGRL*RALLLQGLGSSLIH
Trigger: ATGTATGAGGCTGGAGCCCAGGCCCTGCAACAGCAGTGCTCTCCACAGCCTCCCACGTTGAGCATTCCACAAAGCCTTTCTAGCTCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 90 bp CCGGGCAGGTTCGGCTCTGGCTTCTGGGTTGGACACTGTTTGTCCTaGGGACACTGCTCCTGCTCTGAAGCACTTTCTTCCACAATCTCC +
Preference number: 5 (lower is better)
Translates to: PGRFGSGFWVGHCLS*GHCSCSEALSSTIS
Trigger: GGAGATTGTGGAAGAAAGTGCTTCAGAGCAGGAGCAGTGTCCCCAGGACAAACAGTGTCCAACCCAGAAGCCAGAGCCGAACCTGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCGCAGCCGCTCTCCTTaGGCATGGGTGCTGGATGCC +
Preference number: 5 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLIRSRSP*AWVLDA
Trigger: GGCATCCAGCACCCATGCCAAAGGAGAGCGGCTGCG...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCATCACTGTGCGGCAGTaGCCCCCGATGGAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: PGELSRHLSATLLSSSTFITVRQ*PPMESL
Trigger: CAAGGACTCCATCGGGGGCAACTGCCGCACAGTGAT...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp GCCCTGTTGTCAGACATGAAGCTGAGGGGTAAAGGACAGAGCCCAAGAGTCCCCTGGAGGGCCAACTGTTaGGAGTGGTCCGCATCCTGT +
Preference number: 5 (lower is better)
Translates to: ALLSDMKLRGKGQSPRVPWRANC*EWSASC
Trigger: ACAGGATGCGGACCACTCCAAACAGTTGGCCCTCCA...GGGGACTCTTGGGCTCTGTCCTTTACCCCTCAGCTTCATGTCTGACAACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 90 bp GAAAGGCTTTGTGGAATGCTCAACGTGGGAGGCTGTGGAGAGCACTaGTGTTGCAGGGCCTGGGCTCCAGCCTCATACATCTGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: ERLCGMLNVGGCGEH*CCRAWAPASYIWSF
Trigger: GAAACTCCAGATGTATGAGGCTGGAGCCCAGGCCCTGCAACAGCAGTGCTCTCCACAGCCTCCCACGTTGAGCATTCCACAAAGCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 90 bp CTGGGGCTCTCAGCCCTGTGGTCAACGCTTTCCTCGAGCACTAGTTaGTGCAGGGTCTCAAACTCTGAGATCATGTCAGGAGTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LGLSALWSTLSSSTS*CRVSNSEIMSGVRR
Trigger: CCTCCTGACTCCTGACATGATCTCAGAGTTTGAGACCCTGCAGCAACTAGTGCTCGAGGAAAGCGTTGACCACAGGGCTGAGAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 90 bp GGGCTCTCAGCCCTGTGGTCAACGCTTTCCTCGAGCACTAGTTGCTaGAGGGTCTCAAACTCTGAGATCATGTCAGGAGTCAGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: GLSALWSTLSSSTSC*RVSNSEIMSGVRRL
Trigger: CAACCTCCTGACTCCTGACATGATCTCAGAGTTTGAGACCCTGCAGCAACTAGTGCTCGAGGAAAGCGTTGACCACAGGGCTGAGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 90 bp TCACAAAGATCTGGAAAATGGCATGAGAGCGGGAGGATGTGGCGTTaGCATCCGTGGGGTGCTGTGTGCGGCTACAGTTGCCTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: SQRSGKWHESGRMWR*HPWGAVCGYSCLLS
Trigger: TGACAAGAGGCAACTGTAGCCGCACACAGCACCCCACGGATGCCAACGCCACATCCTCCCGCTCTCATGCCATTTTCCAGATCTTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 90 bp TCCTTTAGGAGTCCTCTGGTCATCAAGGCAGTGGGGGCTCAAGGGTaGCTCTGGGACAGTGAAGGGTCTGTTTGGCTTCTTCAAGGTGCT +
Preference number: 5 (lower is better)
Translates to: SFRSPLVIKAVGAQG*LWDSEGSVWLLQGA
Trigger: AGCACCTTGAAGAAGCCAAACAGACCCTTCACTGTCCCAGAGCCACCCTTGAGCCCCCACTGCCTTGATGACCAGAGGACTCCTAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCTGGGTTGGACACTGTTaGTCCTGGGGACACTGCTCC +
Preference number: 5 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLIWVGHC*SWGHCS
Trigger: GGAGCAGTGTCCCCAGGACAAACAGTGTCCAACCCA...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCGACTCCTCAGAGACATaGAAGGTGGTGTTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: PGELSRHLSATLLSSSTFDSSET*KVVLRS
Trigger: GGACCTCAACACCACCTTCAATGTCTCTGAGGAGTC...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS TCA 90 bp ACCTCAGCCTGGAGCTGCTGGCAGATGGTGGCATATTGGCTAATGTaGTGGTCCACGCTGATCACATTGCTCTTCAGCGTGAGTCTGATC +
Preference number: 5 (lower is better)
Translates to: TSAWSCWQMVAYWLM*WSTLITLLFSVSLI
Trigger: GATCAGACTCACGCTGAAGAGCAATGTGATCAGCGTGGACCATCACATTAGCCAATATGCCACCATCTGCCAGCAGCTCCAGGCTGAGGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 90 bp GTCAATCAAGCTCATCTTGGCTACTCGAAGGGCCTGGGTCAGTCCTaGAACCCGGTCCTGCTGCTTCACAAAGATCTGGAAAATGGCATG +
Preference number: 5 (lower is better)
Translates to: VNQAHLGYSKGLGQS*NPVLLLHKDLENGM
Trigger: CATGCCATTTTCCAGATCTTTGTGAAGCAGCAGGACCGGGTTCCAGGACTGACCCAGGCCCTTCGAGTAGCCAAGATGAGCTTGATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp CCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCGCATCAGCCAGGGCATaGAGGACATTAATGAGTGCT +
Preference number: 5 (lower is better)
Translates to: PGELSRHLSATLLSSSTFASARA*RTLMSA
Trigger: AGCACTCATTAATGTCCTCAATGCCCTGGCTGATGC...GAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTTCAGGAGTCAGGAGGTaGGCTGCCTGCAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFSGVRR*AACSRE
Trigger: CTCCCTGCTGCAGGCAGCCAACCTCCTGACTCCTGA...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp TTTAGCACCAGGAGAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCTCTTTGCCCTTCTTCTaGGGGCCATTGTGGGAACCA +
Preference number: 5 (lower is better)
Translates to: FSTRRAKPAFVSNPLVLISLPFF*GPLWEP
Trigger: TGGTTCCCACAATGGCCCCAAGAAGAAGGGCAAAGA...GATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGGCAGATGGTGGCATATaGGCTAATGTGATGGTCCAC +
Preference number: 5 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVADGGI*ANVMVH
Trigger: GTGGACCATCACATTAGCCAATATGCCACCATCTGC...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp GAGCTAAGCCGGCATTTGTCAGCAACCCTCTTGTCCTCATCCACCTTCACTGTGTTCTTCTTGGGGCCATaGTGGGAACCACTCCATTTT +
Preference number: 5 (lower is better)
Translates to: ELSRHLSATLLSSSTFTVFFLGP*WEPLHF
Trigger: AAAATGGAGTGGTTCCCACAATGGCCCCAAGAAGAA...CACAGTGAAGGTGGATGAGGACAAGAGGGTTGCTGACAAATGCCGGCTTAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp CCTAAGGCTCTATCCTCACAGTCCCCTCTCTCCTTACATTCTGAATGTATGCTGGATGAGCACCTCGAATaGCTTTTCTTCCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: PKALSSQSPLSLHSECMLDEHLE*LFFLAG
Trigger: GCCCGCCAGGAAGAAAAGCAATTCGAGGTGCTCATC...CAGCATACATTCAGAATGTAAGGAGAGAGGGGACTGTGAGGATAGAGCCTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTGAGGCCCTCTCTCTTTaGGGAGTTCTCGGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFEALSL*GVLGSE
Trigger: CTCTGAGCCGAGAACTCCCAAAAGAGAGAGGGCCTC...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp CCTAAGGCTCTATCCTCACAGTCCCCTCTCTCCTTACATTCTGAATGTATGCTGTCCACGCTGATCACATaGCTCTTCAGCGTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: PKALSSQSPLSLHSECMLSTLIT*LFSVSL
Trigger: CAGACTCACGCTGAAGAGCAATGTGATCAGCGTGGA...CAGCATACATTCAGAATGTAAGGAGAGAGGGGACTGTGAGGATAGAGCCTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp CCTAAGGCTCTATCCTCACAGTCCCCTCTCTCCTTACATTCTGAATGTATGCTGACAAATGTCAGGTCTTaGCCCTTCTTCTTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: PKALSSQSPLSLHSECMLTNVRS*PFFLGP
Trigger: TGGCCCCAAGAAGAAGGGCAAAGACCTGACATTTGT...CAGCATACATTCAGAATGTAAGGAGAGAGGGGACTGTGAGGATAGAGCCTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTAAGCTGTCGAGGATGTaGTGTGTGGTGTGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFKLSRM*CVVCWN
Trigger: GTTCCAGCACACCACACACAACATCCTCGACAGCTT...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTATAGTACGCCTCTTCTaGCTGGCAGTGACTGCAGGA +
Preference number: 5 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFIVRLF*LAVTAG
Trigger: TCCTGCAGTCACTGCCAGCAAGAAGAGGCGTACTAT...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp GAGAAGCCAAAGATGAGAAGGATGCCTAACTACCGACACAACCAGCTAGCATTTTCCCAGGCTCTCCTCTaGAAGAGTTTCATTCTTTGC +
Preference number: 5 (lower is better)
Translates to: EKPKMRRMPNYRHNQLAFSQALL*KSFILC
Trigger: GCAAAGAATGAAACTCTTCAAGAGGAGAGCCTGGGA...AAATGCTAGCTGGTTGTGTCGGTAGTTAGGCATCCTTCTCATCTTTGGCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS-3UTR CAA 90 bp CCTAAGGCTCTATCCTCACAGTCCCCTCTCTCCTTACATTCTGAATGTATGCTGTTCCTTTTCTTCTCCTaGGTAGGCTTTTGGAATGTC +
Preference number: 5 (lower is better)
Translates to: PKALSSQSPLSLHSECMLFLFFS*VGFWNV
Trigger: GACATTCCAAAAGCCTACCAAGGAGAAGAAAAGGAA...CAGCATACATTCAGAATGTAAGGAGAGAGGGGACTGTGAGGATAGAGCCTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp ACTCGGAACACAGCGCCTGAGCTAGTGGGTCCCCTCTaGCCAGAGCAGGAGACCTGGGGCTCTCAGCCCTGT +
Preference number: 6 (lower is better)
Translates to: TRNTAPELVGPL*PEQETWGSQPC
Trigger: ACAGGGCTGAGAGCCCCAGGTCTCCTGCTCTGGCCAGAGGGGACCCACTAGCTCAGGCGCTGTGTTCCGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 72 bp CTCCCGCAGCCGCTCTCCTTTGGCATGGGTGCTGGATaGCCGCTCGGAGCCAGCCAGGTCAATCAAGCTCAT +
Preference number: 6 (lower is better)
Translates to: LPQPLSFGMGAG*PLGASQVNQAH
Trigger: ATGAGCTTGATTGACCTGGCTGGCTCCGAGCGGGCATCCAGCACCCATGCCAAAGGAGAGCGGCTGCGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp AGGAGGTTGGCTGCCTGCAGCAGGGAGTATTGTCGCTaGGCCAGGCGGAGCACCTGGAGGGCCAACTGTTTG +
Preference number: 6 (lower is better)
Translates to: RRLAACSREYCR*ARRSTWRANCL
Trigger: CAAACAGTTGGCCCTCCAGGTGCTCCGCCTGGCCCAGCGACAATACTCCCTGCTGCAGGCAGCCAACCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 90 bp GGGCAGACTCGGGAGGAGGGAGAGGGGGAAGAGGCCCTCTCTCTTTaGGGAGTTCTCGGCTCAGAGCACGGCTGGGCCTTAGGTAGAGAG +
Preference number: 6 (lower is better)
Translates to: GQTREEGEGEEALSL*GVLGSEHGWALGRE
Trigger: CTCTCTACCTAAGGCCCAGCCGTGCTCTGAGCCGAGAACTCCCAAAAGAGAGAGGGCCTCTTCCCCCTCTCCCTCCTCCCGAGTCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 90 bp CAGCTGCGGCCTCGGGAGACTGAGGGCCTCATAGTACGCCTCTTCTaGCTGGCAGTGACTGCAGGAAGCGAAGGCTTGCGGCCCTTCGTG +
Preference number: 6 (lower is better)
Translates to: QLRPRETEGLIVRLF*LAVTAGSEGLRPFV
Trigger: CACGAAGGGCCGCAAGCCTTCGCTTCCTGCAGTCACTGCCAGCAAGAAGAGGCGTACTATGAGGCCCTCAGTCTCCCGAGGCCGCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp CCCGCTCGGAGCCAGCCAGGTCAATCAAGCTCATCTTaGCTACTCGAAGGGCCTGGGTCAGTCCTGGAACCC +
Preference number: 6 (lower is better)
Translates to: PARSQPGQSSSS*LLEGPGSVLEP
Trigger: GGGTTCCAGGACTGACCCAGGCCCTTCGAGTAGCCAAGATGAGCTTGATTGACCTGGCTGGCTCCGAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp AGCAGGGAGTATTGTCGCTGGGCCAGGCGGAGCACCTaGAGGGCCAACTGTTTGGAGTGGTCCGCATCCTGT +
Preference number: 6 (lower is better)
Translates to: SREYCRWARRST*RANCLEWSASC
Trigger: ACAGGATGCGGACCACTCCAAACAGTTGGCCCTCCAGGTGCTCCGCCTGGCCCAGCGACAATACTCCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp TGGCATGAGAGCGGGAGGATGTGGCGTTGGCATCCGTaGGGTGCTGTGTGCGGCTACAGTTGCCTCTTGTCA +
Preference number: 6 (lower is better)
Translates to: WHESGRMWRWHP*GAVCGYSCLLS
Trigger: TGACAAGAGGCAACTGTAGCCGCACACAGCACCCCACGGATGCCAACGCCACATCCTCCCGCTCTCATGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp GCTGGGCCAGGCGGAGCACCTGGAGGGCCAACTGTTTaGAGTGGTCCGCATCCTGTTTCTGTGGTGAGTGTT +
Preference number: 6 (lower is better)
Translates to: AGPGGAPGGPTV*SGPHPVSVVSV
Trigger: AACACTCACCACAGAAACAGGATGCGGACCACTCCAAACAGTTGGCCCTCCAGGTGCTCCGCCTGGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 72 bp CCTCGGGAGACTGAGGGCCTCATAGTACGCCTCTTCTaGCTGGCAGTGACTGCAGGAAGCGAAGGCTTGCGG +
Preference number: 6 (lower is better)
Translates to: PRETEGLIVRLF*LAVTAGSEGLR
Trigger: CCGCAAGCCTTCGCTTCCTGCAGTCACTGCCAGCAAGAAGAGGCGTACTATGAGGCCCTCAGTCTCCCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 90 bp TGGCGTTGGCATCCGTGGGGTGCTGTGTGCGGCTACAGTTGCCTCTaGTCAGCATCTCAAGTAACTGCTCGGCTGAGGCTGGCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: WRWHPWGAVCGYSCL*SASQVTARLRLAGG
Trigger: TCCACCAGCCAGCCTCAGCCGAGCAGTTACTTGAGATGCTGACAAGAGGCAACTGTAGCCGCACACAGCACCCCACGGATGCCAACGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 90 bp GAGGATGTGGCGTTGGCATCCGTGGGGTGCTGTGTGCGGCTACAGTaGCCTCTTGTCAGCATCTCAAGTAACTGCTCGGCTGAGGCTGGC +
Preference number: 6 (lower is better)
Translates to: EDVALASVGCCVRLQ*PLVSISSNCSAEAG
Trigger: GCCAGCCTCAGCCGAGCAGTTACTTGAGATGCTGACAAGAGGCAACTGTAGCCGCACACAGCACCCCACGGATGCCAACGCCACATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 90 bp GGGGACCCGGGCAGGTTCGGCTCTGGCTTCTGGGTTGGACACTGTTaGTCCTGGGGACACTGCTCCTGCTCTGAAGCACTTTCTTCCACA +
Preference number: 6 (lower is better)
Translates to: GDPGRFGSGFWVGHC*SWGHCSCSEALSST
Trigger: TGTGGAAGAAAGTGCTTCAGAGCAGGAGCAGTGTCCCCAGGACAAACAGTGTCCAACCCAGAAGCCAGAGCCGAACCTGCCCGGGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 90 bp TGCTGCAGGGTCTCAAACTCTGAGATCATGTCAGGAGTCAGGAGGTaGGCTGCCTGCAGCAGGGAGTATTGTCGCTGGGCCAGGCGGAGC +
Preference number: 6 (lower is better)
Translates to: CCRVSNSEIMSGVRR*AACSREYCRWARRS
Trigger: GCTCCGCCTGGCCCAGCGACAATACTCCCTGCTGCAGGCAGCCAACCTCCTGACTCCTGACATGATCTCAGAGTTTGAGACCCTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS TCA 72 bp CAGTACCCTGAAGACTTAGACTCGGAACACAGCGCCTaGGCTAGTGGGTCCCCTCTGGCCAGAGCAGGAGAC +
Preference number: 6 (lower is better)
Translates to: QYPEDLDSEHSA*ASGSPLARAGD
Trigger: GTCTCCTGCTCTGGCCAGAGGGGACCCACTAGCTCAGGCGCTGTGTTCCGAGTCTAAGTCTTCAGGGTACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 72 bp TGTGGAATGCTCAACGTGGGAGGCTGTGGAGAGCACTaGTGTTGCAGGGCCTGGGCTCCAGCCTCATACATC +
Preference number: 6 (lower is better)
Translates to: CGMLNVGGCGEH*CCRAWAPASYI
Trigger: GATGTATGAGGCTGGAGCCCAGGCCCTGCAACAGCAGTGCTCTCCACAGCCTCCCACGTTGAGCATTCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp TCTGGAAAATGGCATGAGAGCGGGAGGATGTGGCGTTaGCATCCGTGGGGTGCTGTGTGCGGCTACAGTTGC +
Preference number: 6 (lower is better)
Translates to: SGKWHESGRMWR*HPWGAVCGYSC
Trigger: GCAACTGTAGCCGCACACAGCACCCCACGGATGCCAACGCCACATCCTCCCGCTCTCATGCCATTTTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp TGCTGTTGCAGGGCCTGGGCTCCAGCCTCATACATCTaGAGTTTCTCCCTCAGGAAGGCTACCTCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: CCCRAWAPASYI*SFSLRKATSAW
Trigger: CCAGGCTGAGGTAGCCTTCCTGAGGGAGAAACTCCAGATGTATGAGGCTGGAGCCCAGGCCCTGCAACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp AGAAAGGCTTTGTGGAATGCTCAACGTGGGAGGCTGTaGAGAGCACTGCTGTTGCAGGGCCTGGGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RKALWNAQRGRL*RALLLQGLGSS
Trigger: GCTGGAGCCCAGGCCCTGCAACAGCAGTGCTCTCCACAGCCTCCCACGTTGAGCATTCCACAAAGCCTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp TACACTTGGACTAGGGGACCCGGGCAGGTTCGGCTCTaGCTTCTGGGTTGGACACTGTTTGTCCTGGGGACA +
Preference number: 6 (lower is better)
Translates to: YTWTRGPGQVRL*LLGWTLFVLGT
Trigger: TGTCCCCAGGACAAACAGTGTCCAACCCAGAAGCCAGAGCCGAACCTGCCCGGGTCCCCTAGTCCAAGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 72 bp AATGCTCAACGTGGGAGGCTGTGGAGAGCACTGCTGTaGCAGGGCCTGGGCTCCAGCCTCATACATCTGGAG +
Preference number: 6 (lower is better)
Translates to: NAQRGRLWRALL*QGLGSSLIHLE
Trigger: CTCCAGATGTATGAGGCTGGAGCCCAGGCCCTGCAACAGCAGTGCTCTCCACAGCCTCCCACGTTGAGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 72 bp TGGAAGCTGGGTTTGGAGGGGGACTCCTCAGAGACATaGAAGGTGGTGTTGAGGTCCCGAGTGGGTAGGGCC +
Preference number: 6 (lower is better)
Translates to: WKLGLEGDSSET*KVVLRSRVGRA
Trigger: GGCCCTACCCACTCGGGACCTCAACACCACCTTCAATGTCTCTGAGGAGTCCCCCTCCAAACCCAGCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 90 bp GCTTTGTGGAATGCTCAACGTGGGAGGCTGTGGAGAGCACTGCTGTaGCAGGGCCTGGGCTCCAGCCTCATACATCTGGAGTTTCTCCCT +
Preference number: 6 (lower is better)
Translates to: ALWNAQRGRLWRALL*QGLGSSLIHLEFLP
Trigger: AGGGAGAAACTCCAGATGTATGAGGCTGGAGCCCAGGCCCTGCAACAGCAGTGCTCTCCACAGCCTCCCACGTTGAGCATTCCACAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS TCA 72 bp TGCAGTCAGGTGCGAGTGGGGCCCCCAGAGTGTGTGTaGGACCATTCAGTTGCTTTGCCATGGTCCTGGTCA +
Preference number: 6 (lower is better)
Translates to: CSQVRVGPPECV*DHSVALPWSWS
Trigger: TGACCAGGACCATGGCAAAGCAACTGAATGGTCTCACACACACTCTGGGGGCCCCACTCGCACCTGACTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 72 bp CGTTGGCATCCGTGGGGTGCTGTGTGCGGCTACAGTTaGCTCTTGTCAGCATCTCAAGTAACTGCTCGGCTG +
Preference number: 6 (lower is better)
Translates to: RWHPWGAVCGYS*LLSASQVTARL
Trigger: CAGCCGAGCAGTTACTTGAGATGCTGACAAGAGGCAACTGTAGCCGCACACAGCACCCCACGGATGCCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 72 bp GGGAGGATGTGGCGTTGGCATCCGTGGGGTGCTGTGTaGGGCTACAGTTGCCTCTTGTCAGCATCTCAAGTA +
Preference number: 6 (lower is better)
Translates to: GRMWRWHPWGAV*GYSCLLSASQV
Trigger: TACTTGAGATGCTGACAAGAGGCAACTGTAGCCGCACACAGCACCCCACGGATGCCAACGCCACATCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 72 bp CGAAGGCTTGCGGCCCTTCGTGAATATGAAGACAGGTaGGCTGGGGAGAAAGGGCTGGTCGGTACTGTTCAG +
Preference number: 6 (lower is better)
Translates to: RRLAALREYEDR*AGEKGLVGTVQ
Trigger: CTGAACAGTACCGACCAGCCCTTTCTCCCCAGCGCACCTGTCTTCATATTCACGAAGGGCCGCAAGCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp GTGGAAAGAAAGTCCCGGCACCACAACACCCTTATCTaGGTCCTCACGGATGGTGAGGGGTCCTTTGGGCTC +
Preference number: 6 (lower is better)
Translates to: VERKSRHHNTLI*VLTDGEGSFGL
Trigger: GAGCCCAAAGGACCCCTCACCATCCGTGAGGACCCAGATAAGGGTGTTGTGGTGCCGGGACTTTCTTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp CAAAGATCTGGAAAATGGCATGAGAGCGGGAGGATGTaGCGTTGGCATCCGTGGGGTGCTGTGTGCGGCTAC +
Preference number: 6 (lower is better)
Translates to: QRSGKWHESGRM*RWHPWGAVCGY
Trigger: GTAGCCGCACACAGCACCCCACGGATGCCAACGCCACATCCTCCCGCTCTCATGCCATTTTCCAGATCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 72 bp GGCAGGTTCGGCTCTGGCTTCTGGGTTGGACACTGTTaGTCCTGGGGACACTGCTCCTGCTCTGAAGCACTT +
Preference number: 6 (lower is better)
Translates to: GRFGSGFWVGHC*SWGHCSCSEAL
Trigger: AAGTGCTTCAGAGCAGGAGCAGTGTCCCCAGGACAAACAGTGTCCAACCCAGAAGCCAGAGCCGAACCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS TCA 72 bp CAAGGCAGTGGGGGCTCAAGGGTGGCTCTGGGACAGTaGAGGGTCTGTTTGGCTTCTTCAAGGTGCTACTGT +
Preference number: 6 (lower is better)
Translates to: QGSGGSRVALGQ*RVCLASSRCYC
Trigger: ACAGTAGCACCTTGAAGAAGCCAAACAGACCCTTCACTGTCCCAGAGCCACCCTTGAGCCCCCACTGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 72 bp AGTGGGGCCCCCAGAGTGTGTGTGAGACCATTCAGTTaGTTTGCCATGGTCCTGGTCACTGGACCACAGTAC +
Preference number: 6 (lower is better)
Translates to: SGAPRVCVRPFS*FAMVLVTGPQY
Trigger: GTACTGTGGTCCAGTGACCAGGACCATGGCAAAGCAACTGAATGGTCTCACACACACTCTGGGGGCCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp GCTCATCTTGGCTACTCGAAGGGCCTGGGTCAGTCCTaGAACCCGGTCCTGCTGCTTCACAAAGATCTGGAA +
Preference number: 6 (lower is better)
Translates to: AHLGYSKGLGQS*NPVLLLHKDLE
Trigger: TTCCAGATCTTTGTGAAGCAGCAGGACCGGGTTCCAGGACTGACCCAGGCCCTTCGAGTAGCCAAGATGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp AGGTCAATCAAGCTCATCTTGGCTACTCGAAGGGCCTaGGTCAGTCCTGGAACCCGGTCCTGCTGCTTCACA +
Preference number: 6 (lower is better)
Translates to: RSIKLILATRRA*VSPGTRSCCFT
Trigger: TGTGAAGCAGCAGGACCGGGTTCCAGGACTGACCCAGGCCCTTCGAGTAGCCAAGATGAGCTTGATTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp AGTCCTCTGGTCATCAAGGCAGTGGGGGCTCAAGGGTaGCTCTGGGACAGTGAAGGGTCTGTTTGGCTTCTT +
Preference number: 6 (lower is better)
Translates to: SPLVIKAVGAQG*LWDSEGSVWLL
Trigger: AAGAAGCCAAACAGACCCTTCACTGTCCCAGAGCCACCCTTGAGCCCCCACTGCCTTGATGACCAGAGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 72 bp GTCTCAAACTCTGAGATCATGTCAGGAGTCAGGAGGTaGGCTGCCTGCAGCAGGGAGTATTGTCGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: VSNSEIMSGVRR*AACSREYCRWA
Trigger: GGCCCAGCGACAATACTCCCTGCTGCAGGCAGCCAACCTCCTGACTCCTGACATGATCTCAGAGTTTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 72 bp GAGTGGGGCCCCCAGAGTGTGTGTGAGACCATTCAGTaGCTTTGCCATGGTCCTGGTCACTGGACCACAGTA +
Preference number: 6 (lower is better)
Translates to: EWGPQSVCETIQ*LCHGPGHWTTV
Trigger: TACTGTGGTCCAGTGACCAGGACCATGGCAAAGCAACTGAATGGTCTCACACACACTCTGGGGGCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS TCA 72 bp CAACTGTTTGGAGTGGTCCGCATCCTGTTTCTGTGGTaGGTGTTGGCCCGTGCCTGGCTTTGCCTGTACACT +
Preference number: 6 (lower is better)
Translates to: QLFGVVRILFLW*VLARAWLCLYT
Trigger: AGTGTACAGGCAAAGCCAGGCACGGGCCAACACTCACCACAGAAACAGGATGCGGACCACTCCAAACAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp TTCGGCTCTGGCTTCTGGGTTGGACACTGTTTGTCCTaGGGACACTGCTCCTGCTCTGAAGCACTTTCTTCC +
Preference number: 6 (lower is better)
Translates to: FGSGFWVGHCLS*GHCSCSEALSS
Trigger: GGAAGAAAGTGCTTCAGAGCAGGAGCAGTGTCCCCAGGACAAACAGTGTCCAACCCAGAAGCCAGAGCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp GCTCAAGGGTGGCTCTGGGACAGTGAAGGGTCTGTTTaGCTTCTTCAAGGTGCTACTGTGGAGACGGGCAAT +
Preference number: 6 (lower is better)
Translates to: AQGWLWDSEGSV*LLQGATVETGN
Trigger: ATTGCCCGTCTCCACAGTAGCACCTTGAAGAAGCCAAACAGACCCTTCACTGTCCCAGAGCCACCCTTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 90 bp CAGGAAGGCTACCTCAGCCTGGAGCTGCTGGCAGATGGTGGCATATaGGCTAATGTGATGGTCCACGCTGATCACATTGCTCTTCAGCGT +
Preference number: 6 (lower is better)
Translates to: QEGYLSLELLADGGI*ANVMVHADHIALQR
Trigger: ACGCTGAAGAGCAATGTGATCAGCGTGGACCATCACATTAGCCAATATGCCACCATCTGCCAGCAGCTCCAGGCTGAGGTAGCCTTCCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 72 bp GGCTTCTGGGTTGGACACTGTTTGTCCTGGGGACACTaGTCCTGCTCTGAAGCACTTTCTTCCACAATCTCC +
Preference number: 6 (lower is better)
Translates to: GFWVGHCLSWGH*SCSEALSSTIS
Trigger: GGAGATTGTGGAAGAAAGTGCTTCAGAGCAGGAGCAGTGTCCCCAGGACAAACAGTGTCCAACCCAGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 72 bp GCCCTGTGGTCAACGCTTTCCTCGAGCACTAGTTGCTaGAGGGTCTCAAACTCTGAGATCATGTCAGGAGTC +
Preference number: 6 (lower is better)
Translates to: ALWSTLSSSTSC*RVSNSEIMSGV
Trigger: GACTCCTGACATGATCTCAGAGTTTGAGACCCTGCAGCAACTAGTGCTCGAGGAAAGCGTTGACCACAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CCA 72 bp TGTAGCCCTGGAGAAAGCTGTCGAGGATGTTGTGTGTaGTGTGCTGGAACACATCCTCCTGAGTGGCCATCT +
Preference number: 6 (lower is better)
Translates to: CSPGESCRGCCV*CAGTHPPEWPS
Trigger: AGATGGCCACTCAGGAGGATGTGTTCCAGCACACCACACACAACATCCTCGACAGCTTTCTCCAGGGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS GCA 72 bp TCAGCCCTGTGGTCAACGCTTTCCTCGAGCACTAGTTaGTGCAGGGTCTCAAACTCTGAGATCATGTCAGGA +
Preference number: 6 (lower is better)
Translates to: SALWSTLSSSTS*CRVSNSEIMSG
Trigger: TCCTGACATGATCTCAGAGTTTGAGACCCTGCAGCAACTAGTGCTCGAGGAAAGCGTTGACCACAGGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 90 bp GATCTGCTCATTGTACACCTCCAGGTAACTGATGAGCACCTCGAATaGCTTTTCTTCCTGGCGGGCTTCCAGACGCCTGTACAGTTCCAT +
Preference number: 6 (lower is better)
Translates to: DLLIVHLQVTDEHLE*LFFLAGFQTPVQFH
Trigger: ATGGAACTGTACAGGCGTCTGGAAGCCCGCCAGGAAGAAAAGCAATTCGAGGTGCTCATCAGTTACCTGGAGGTGTACAATGAGCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS CAA 72 bp ATTGTACACCTCCAGGTAACTGATGAGCACCTCGAATaGCTTTTCTTCCTGGCGGGCTTCCAGACGCCTGTA +
Preference number: 6 (lower is better)
Translates to: IVHLQVTDEHLE*LFFLAGFQTPV
Trigger: TACAGGCGTCTGGAAGCCCGCCAGGAAGAAAAGCAATTCGAGGTGCTCATCAGTTACCTGGAGGTGTACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10
CDS TCA 72 bp AGCACTTTCTTCCACAATCTCCTGTCCCTGGGCGTCTaGTCCCAGGCTCTCCTCTTGAAGAGTTTCATTCTT +
Preference number: 6 (lower is better)
Translates to: STFFHNLLSLGV*SQALLLKSFIL
Trigger: AAGAATGAAACTCTTCAAGAGGAGAGCCTGGGATCAGACGCCCAGGGACAGGAGATTGTGGAAGAAAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021311.10