Pregenerated sensors for KIF18A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027115Ensembl transcript IDs: ENSMUST00000028527.8
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GAAAGTAAAATGACATGTATGATTAAACCAACATATTaGCACACAGCAGAAGACCAAATACATCTTGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: ESKMTCMIKPTY*HTAEDQIHLGH Trigger: ATGGCCAAGATGTATTTGGTCTTCTGCTGTGTGTCAATATGTTGGTTTAATCATACATGTCATTTTACTTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS TCA 90 bp | AGCACCCGAAACACTGGCCCTCTCAGATCCTGCGAGGTCGATGAGTaGCATTTTGGCTATACGGACATTTTGATTGATGCTCGCTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: STRNTGPLRSCEVDE*HFGYTDILIDARCF Trigger: AAAACAGCGAGCATCAATCAAAATGTCCGTATAGCCAAAATGTCACTCATCGACCTCGCAGGATCTGAGAGGGCCAGTGTTTCGGGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS GCA 90 bp | AGTACTGGAAGCAAAGCATTCAATACTGCCTCAGTTTGCTTGTGCTaGTGTTCCTGGAGACAAGCTAGAGCTGTCATGTGTGCCATTTGT | + |
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Preference number: 5 (lower is better) Translates to: STGSKAFNTASVCLC*CSWRQARAVMCAIC Trigger: ACAAATGGCACACATGACAGCTCTAGCTTGTCTCCAGGAACAGCAGCACAAGCAAACTGAGGCAGTATTGAATGCTTTGCTTCCAGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CCA 90 bp | TCTGGAAAACAGCATGGGAACGAGAAGACACTGCATTCACGTCAGTaGGATGCTGGGTCCTGTTTTTGTTTCCATTGTCTAGTAGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: SGKQHGNEKTLHSRQ*DAGSCFCFHCLVAV Trigger: TACAGCTACTAGACAATGGAAACAAAAACAGGACCCAGCATCCCACTGACGTGAATGCAGTGTCTTCTCGTTCCCATGCTGTTTTCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CCA 90 bp | AGCAAAGCATTCAATACTGCCTCAGTTTGCTTGTGCTGCTGTTCCTaGAGACAAGCTAGAGCTGTCATGTGTGCCATTTGTGTTTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: SKAFNTASVCLCCCS*RQARAVMCAICVFS Trigger: ACTGAAAACACAAATGGCACACATGACAGCTCTAGCTTGTCTCCAGGAACAGCAGCACAAGCAAACTGAGGCAGTATTGAATGCTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS GCA 90 bp | TTGTCGCAAATAAATCTGGAAAACAGCATGGGAACGAGAAGACACTaGATTCACGTCAGTGGGATGCTGGGTCCTGTTTTTGTTTCCATT | + |
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Preference number: 5 (lower is better) Translates to: LSQINLENSMGTRRH*IHVSGMLGPVFVSI Trigger: AATGGAAACAAAAACAGGACCCAGCATCCCACTGACGTGAATGCAGTGTCTTCTCGTTCCCATGCTGTTTTCCAGATTTATTTGCGACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS GCA 90 bp | TCAGGCATAGAATCCTTTGTTGAAAATGAAGAAGACTCTATCCTGTaGACACTGCTTTTGCTGCTTGCTAGTGGTTCTTGTTCAGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SGIESFVENEEDSIL*TLLLLLASGSCSGH Trigger: ATGGCCTGAACAAGAACCACTAGCAAGCAGCAAAAGCAGTGTGCACAGGATAGAGTCTTCTTCATTTTCAACAAAGGATTCTATGCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CCA 90 bp | CACGTTAGGATCACTCACAGATGTGCAACAAGAAATAGACTGAATTaGTTCAAGCTGTGGGAAGGTCATAAGAAGAGAAATCCCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: HVRITHRCATRNRLN*FKLWEGHKKRNPWK Trigger: CTTCCAGGGATTTCTCTTCTTATGACCTTCCCACAGCTTGAACCAATTCAGTCTATTTCTTGTTGCACATCTGTGAGTGATCCTAACGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CCA 90 bp | CACTCAGTTCTGCTGAGAGGAGACTCTATTCTACACAGTGCTTTCTaGGAATTGTCATTCATTACATTTGCAGACTGCGATGAAGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: HSVLLRGDSILHSAF*ELSFITFADCDEVL Trigger: GAGAACTTCATCGCAGTCTGCAAATGTAATGAATGACAATTCCCAGAAAGCACTGTGTAGAATAGAGTCTCCTCTCAGCAGAACTGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS TCA 90 bp | GTTCTTTGTTCTGGAGGTGTAAATGGTGACAGTGAAGCTCTTTATTaGGTGCCTCTGGAATATCACCATTTTGACCCAAGAGTCGCATTT | + |
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Preference number: 5 (lower is better) Translates to: VLCSGGVNGDSEALY*VPLEYHHFDPRVAF Trigger: AAATGCGACTCTTGGGTCAAAATGGTGATATTCCAGAGGCACTCAATAAAGAGCTTCACTGTCACCATTTACACCTCCAGAACAAAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS TCA 90 bp | TTAAGCACGTTAGGATCACTCACAGATGTGCAACAAGAAATAGACTaGATTGGTTCAAGCTGTGGGAAGGTCATAAGAAGAGAAATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSTLGSLTDVQQEID*IGSSCGKVIRREIP Trigger: AGGGATTTCTCTTCTTATGACCTTCCCACAGCTTGAACCAATTCAGTCTATTTCTTGTTGCACATCTGTGAGTGATCCTAACGTGCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS TCA 90 bp | TTTATAGCCCACTTTCAGTCTGTTTTCTTGCATAGGCTTAACGCTTaGATTATCCCGTCGAATGCGTTTGGCAAATCCACAACTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: FIAHFQSVFLHRLNA*IIPSNAFGKSTTFI Trigger: GATGAAAGTTGTGGATTTGCCAAACGCATTCGACGGGATAATTCAAGCGTTAAGCCTATGCAAGAAAACAGACTGAAAGTGGGCTATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CCA 90 bp | ACTCACAGATGTGCAACAAGAAATAGACTGAATTGGTTCAAGCTGTaGGAAGGTCATAAGAAGAGAAATCCCTGGAAGATCATTTCGGTT | + |
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Preference number: 5 (lower is better) Translates to: THRCATRNRLNWFKL*EGHKKRNPWKIISV Trigger: AACCGAAATGATCTTCCAGGGATTTCTCTTCTTATGACCTTCCCACAGCTTGAACCAATTCAGTCTATTTCTTGTTGCACATCTGTGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS GCA 72 bp | TGGGAACGAGAAGACACTGCATTCACGTCAGTGGGATaGTGGGTCCTGTTTTTGTTTCCATTGTCTAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: WEREDTAFTSVG*WVLFLFPLSSS Trigger: GCTACTAGACAATGGAAACAAAAACAGGACCCAGCATCCCACTGACGTGAATGCAGTGTCTTCTCGTTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 72 bp | ACTGGAAGCAAAGCATTCAATACTGCCTCAGTTTGCTaGTGCTGCTGTTCCTGGAGACAAGCTAGAGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: TGSKAFNTASVC*CCCSWRQARAV Trigger: GACAGCTCTAGCTTGTCTCCAGGAACAGCAGCACAAGCAAACTGAGGCAGTATTGAATGCTTTGCTTCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS TCA 72 bp | AACACTGGCCCTCTCAGATCCTGCGAGGTCGATGAGTaGCATTTTGGCTATACGGACATTTTGATTGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: NTGPLRSCEVDE*HFGYTDILIDA Trigger: AGCATCAATCAAAATGTCCGTATAGCCAAAATGTCACTCATCGACCTCGCAGGATCTGAGAGGGCCAGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS GCA 72 bp | AGTACTGGAAGCAAAGCATTCAATACTGCCTCAGTTTaGTTGTGCTGCTGTTCCTGGAGACAAGCTAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: STGSKAFNTASV*LCCCSWRQARA Trigger: AGCTCTAGCTTGTCTCCAGGAACAGCAGCACAAGCAAACTGAGGCAGTATTGAATGCTTTGCTTCCAGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CCA 72 bp | GAACGAGAAGACACTGCATTCACGTCAGTGGGATGCTaGGTCCTGTTTTTGTTTCCATTGTCTAGTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: EREDTAFTSVGC*VLFLFPLSSSC Trigger: ACAGCTACTAGACAATGGAAACAAAAACAGGACCCAGCATCCCACTGACGTGAATGCAGTGTCTTCTCGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 90 bp | TATCCACTACATGAACCACTTTACAGAACTGCACCGCCTTTTCTTTaGTGTTCTCAGGACGTACACGGACAACTACTTTCATGCGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: YPLHEPLYRTAPPFL*CSQDVHGQLLSCGD Trigger: GTCACCGCATGAAAGTAGTTGTCCGTGTACGTCCTGAGAACACAAAAGAAAAGGCGGTGCAGTTCTGTAAAGTGGTTCATGTAGTGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 90 bp | ACGGCAGTGCTACACTCTTTCTCTTCTTTAATCTCATCGATGCATTaGAAAAGGTCCAGCATTGTCAGGTACATGACCCCAGGTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TAVLHSFSSLISSMH*KRSSIVRYMTPGSA Trigger: TGCTGAACCTGGGGTCATGTACCTGACAATGCTGGACCTTTTCAAATGCATCGATGAGATTAAAGAAGAGAAAGAGTGTAGCACTGCCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 90 bp | CCTCTGATGCTATCACACAGAGTAGATGTAGAGTACAAACCCTGTTaGCACTCAGTTCTGCTGAGAGGAGACTCTATTCTACACAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: PLMLSHRVDVEYKPC*HSVLLRGDSILHSA Trigger: AGCACTGTGTAGAATAGAGTCTCCTCTCAGCAGAACTGAGTGCAAACAGGGTTTGTACTCTACATCTACTCTGTGTGATAGCATCAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 72 bp | CATGAACCACTTTACAGAACTGCACCGCCTTTTCTTTaGTGTTCTCAGGACGTACACGGACAACTACTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: HEPLYRTAPPFL*CSQDVHGQLLS Trigger: TGAAAGTAGTTGTCCGTGTACGTCCTGAGAACACAAAAGAAAAGGCGGTGCAGTTCTGTAAAGTGGTTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 90 bp | ACTGCATTCACGTCAGTGGGATGCTGGGTCCTGTTTTTGTTTCCATaGTCTAGTAGCTGTAATATTTCCTCTGAAGATTTAGGCTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: TAFTSVGCWVLFLFP*SSSCNISSEDLGWC Trigger: ACACCAGCCTAAATCTTCAGAGGAAATATTACAGCTACTAGACAATGGAAACAAAAACAGGACCCAGCATCCCACTGACGTGAATGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS TCA 72 bp | AAGAGATTTGTTAATATTTGTGCCTTCTACAAATCGTaGCCCTTTAGCACCCGAAACACTGGCCCTCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: KRFVNICAFYKS*PFSTRNTGPLR Trigger: TCTGAGAGGGCCAGTGTTTCGGGTGCTAAAGGGTCACGATTTGTAGAAGGCACAAATATTAACAAATCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS TCA 72 bp | TCTGGAGGTGTAAATGGTGACAGTGAAGCTCTTTATTaGGTGCCTCTGGAATATCACCATTTTGACCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: SGGVNGDSEALY*VPLEYHHFDPR Trigger: TCTTGGGTCAAAATGGTGATATTCCAGAGGCACTCAATAAAGAGCTTCACTGTCACCATTTACACCTCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS TCA 72 bp | CACTTTCAGTCTGTTTTCTTGCATAGGCTTAACGCTTaGATTATCCCGTCGAATGCGTTTGGCAAATCCACA | + |
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Preference number: 6 (lower is better) Translates to: HFQSVFLHRLNA*IIPSNAFGKST Trigger: TGTGGATTTGCCAAACGCATTCGACGGGATAATTCAAGCGTTAAGCCTATGCAAGAAAACAGACTGAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CCA 72 bp | CTGCTGAGAGGAGACTCTATTCTACACAGTGCTTTCTaGGAATTGTCATTCATTACATTTGCAGACTGCGAT | + |
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Preference number: 6 (lower is better) Translates to: LLRGDSILHSAF*ELSFITFADCD Trigger: ATCGCAGTCTGCAAATGTAATGAATGACAATTCCCAGAAAGCACTGTGTAGAATAGAGTCTCCTCTCAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 72 bp | CTATCACACAGAGTAGATGTAGAGTACAAACCCTGTTaGCACTCAGTTCTGCTGAGAGGAGACTCTATTCTA | + |
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Preference number: 6 (lower is better) Translates to: LSHRVDVEYKPC*HSVLLRGDSIL Trigger: TAGAATAGAGTCTCCTCTCAGCAGAACTGAGTGCAAACAGGGTTTGTACTCTACATCTACTCTGTGTGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 72 bp | GAAAATGAAGAAGACTCTATCCTGTGCACACTGCTTTaGCTGCTTGCTAGTGGTTCTTGTTCAGGCCATTTA | + |
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Preference number: 6 (lower is better) Translates to: ENEEDSILCTLL*LLASGSCSGHL Trigger: TAAATGGCCTGAACAAGAACCACTAGCAAGCAGCAAAAGCAGTGTGCACAGGATAGAGTCTTCTTCATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 90 bp | CGAGAAGACACTGCATTCACGTCAGTGGGATGCTGGGTCCTGTTTTaGTTTCCATTGTCTAGTAGCTGTAATATTTCCTCTGAAGATTTA | + |
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Preference number: 6 (lower is better) Translates to: REDTAFTSVGCWVLF*FPLSSSCNISSEDL Trigger: TAAATCTTCAGAGGAAATATTACAGCTACTAGACAATGGAAACAAAAACAGGACCCAGCATCCCACTGACGTGAATGCAGTGTCTTCTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 90 bp | GTTCTGCTGAGAGGAGACTCTATTCTACACAGTGCTTTCTGGGAATaGTCATTCATTACATTTGCAGACTGCGATGAAGTTCTCGTTAAG | + |
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Preference number: 6 (lower is better) Translates to: VLLRGDSILHSAFWE*SFITFADCDEVLVK Trigger: CTTAACGAGAACTTCATCGCAGTCTGCAAATGTAATGAATGACAATTCCCAGAAAGCACTGTGTAGAATAGAGTCTCCTCTCAGCAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS TCA 72 bp | AGCTCTTTATTGAGTGCCTCTGGAATATCACCATTTTaGCCCAAGAGTCGCATTTCGTTTTCAACACGATGT | + |
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Preference number: 6 (lower is better) Translates to: SSLLSASGISPF*PKSRISFSTRC Trigger: ACATCGTGTTGAAAACGAAATGCGACTCTTGGGTCAAAATGGTGATATTCCAGAGGCACTCAATAAAGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS GCA 72 bp | GCTTTCTGGGAATTGTCATTCATTACATTTGCAGACTaGGATGAAGTTCTCGTTAAGGATGGAAACAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: AFWELSFITFAD*DEVLVKDGNRS Trigger: AGACCTGTTTCCATCCTTAACGAGAACTTCATCGCAGTCTGCAAATGTAATGAATGACAATTCCCAGAAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS GCA 72 bp | CTCAGTTCTGCTGAGAGGAGACTCTATTCTACACAGTaGTTTCTGGGAATTGTCATTCATTACATTTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LSSAERRLYSTQ*FLGIVIHYICR Trigger: TCTGCAAATGTAATGAATGACAATTCCCAGAAAGCACTGTGTAGAATAGAGTCTCCTCTCAGCAGAACTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS GCA 72 bp | GAATCCTTTGTTGAAAATGAAGAAGACTCTATCCTGTaGACACTGCTTTTGCTGCTTGCTAGTGGTTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: ESFVENEEDSIL*TLLLLLASGSC Trigger: ACAAGAACCACTAGCAAGCAGCAAAAGCAGTGTGCACAGGATAGAGTCTTCTTCATTTTCAACAAAGGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 72 bp | CTACACTCTTTCTCTTCTTTAATCTCATCGATGCATTaGAAAAGGTCCAGCATTGTCAGGTACATGACCCCA | + |
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Preference number: 6 (lower is better) Translates to: LHSFSSLISSMH*KRSSIVRYMTP Trigger: TGGGGTCATGTACCTGACAATGCTGGACCTTTTCAAATGCATCGATGAGATTAAAGAAGAGAAAGAGTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 72 bp | AAGCTCTTTATTGAGTGCCTCTGGAATATCACCATTTaGACCCAAGAGTCGCATTTCGTTTTCAACACGATG | + |
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Preference number: 6 (lower is better) Translates to: KLFIECLWNITI*TQESHFVFNTM Trigger: CATCGTGTTGAAAACGAAATGCGACTCTTGGGTCAAAATGGTGATATTCCAGAGGCACTCAATAAAGAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 90 bp | ACTCTATTCTACACAGTGCTTTCTGGGAATTGTCATTCATTACATTaGCAGACTGCGATGAAGTTCTCGTTAAGGATGGAAACAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: TLFYTVLSGNCHSLH*QTAMKFSLRMETGL Trigger: AAGACCTGTTTCCATCCTTAACGAGAACTTCATCGCAGTCTGCAAATGTAATGAATGACAATTCCCAGAAAGCACTGTGTAGAATAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS TCA 72 bp | AAAGAGGAAGGACTAACAGCAGCTATCATTATAGTTTaGCAGTTTCCTCCAAGAGAATCCTTCAGCAAACGA | + |
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Preference number: 6 (lower is better) Translates to: KEEGLTAAIIIV*QFPPRESFSKR Trigger: TCGTTTGCTGAAGGATTCTCTTGGAGGAAACTGTCAAACTATAATGATAGCTGCTGTTAGTCCTTCCTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS TCA 72 bp | TTAGGATCACTCACAGATGTGCAACAAGAAATAGACTaGATTGGTTCAAGCTGTGGGAAGGTCATAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LGSLTDVQQEID*IGSSCGKVIRR Trigger: TCTTCTTATGACCTTCCCACAGCTTGAACCAATTCAGTCTATTTCTTGTTGCACATCTGTGAGTGATCCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CCA 72 bp | GGGAGAAGGAATTATTTTTCTTCTGGTTCTTCGTTGTaGAGTAAGTTTAAGCACGTTAGGATCACTCACAGA | + |
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Preference number: 6 (lower is better) Translates to: GRRNYFSSGSSL*SKFKHVRITHR Trigger: TCTGTGAGTGATCCTAACGTGCTTAAACTTACTCCACAACGAAGAACCAGAAGAAAAATAATTCCTTCTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 72 bp | ACGTCAGTGGGATGCTGGGTCCTGTTTTTGTTTCCATaGTCTAGTAGCTGTAATATTTCCTCTGAAGATTTA | + |
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Preference number: 6 (lower is better) Translates to: TSVGCWVLFLFP*SSSCNISSEDL Trigger: TAAATCTTCAGAGGAAATATTACAGCTACTAGACAATGGAAACAAAAACAGGACCCAGCATCCCACTGACGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 72 bp | AGAGGAGACTCTATTCTACACAGTGCTTTCTGGGAATaGTCATTCATTACATTTGCAGACTGCGATGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: RGDSILHSAFWE*SFITFADCDEV Trigger: AACTTCATCGCAGTCTGCAAATGTAATGAATGACAATTCCCAGAAAGCACTGTGTAGAATAGAGTCTCCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 90 bp | GTATTTGCTAAGGCATTGATGACATTCCCAAGAGCTAAAAGAGATTaGTTAATATTTGTGCCTTCTACAAATCGTGACCCTTTAGCACCC | + |
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Preference number: 6 (lower is better) Translates to: VFAKALMTFPRAKRD*LIFVPSTNRDPLAP Trigger: GGGTGCTAAAGGGTCACGATTTGTAGAAGGCACAAATATTAACAAATCTCTTTTAGCTCTTGGGAATGTCATCAATGCCTTAGCAAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS TCA 72 bp | TCATTGAGCTGTGTACTTTCAGACAGTGCAGACTTCTaGGTATGTTGTACTTTCAAGGGAGAAGGAATTATT | + |
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Preference number: 6 (lower is better) Translates to: SLSCVLSDSADF*VCCTFKGEGII Trigger: AATAATTCCTTCTCCCTTGAAAGTACAACATACTCAGAAGTCTGCACTGTCTGAAAGTACACAGCTCAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 72 bp | ATAGGCTTAACGCTTGAATTATCCCGTCGAATGCGTTaGGCAAATCCACAACTTTCATCAGATTTGATTGAA | + |
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Preference number: 6 (lower is better) Translates to: IGLTLELSRRMR*ANPQLSSDLIE Trigger: TTCAATCAAATCTGATGAAAGTTGTGGATTTGCCAAACGCATTCGACGGGATAATTCAAGCGTTAAGCCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 90 bp | TTTTCTTGCATAGGCTTAACGCTTGAATTATCCCGTCGAATGCGTTaGGCAAATCCACAACTTTCATCAGATTTGATTGAAGCATTTGAT | + |
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Preference number: 6 (lower is better) Translates to: FSCIGLTLELSRRMR*ANPQLSSDLIEAFD Trigger: ATCAAATGCTTCAATCAAATCTGATGAAAGTTGTGGATTTGCCAAACGCATTCGACGGGATAATTCAAGCGTTAAGCCTATGCAAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS TCA 72 bp | TTCGGATCAAAACTGAGTATATGTTTATCCACTACATaGACCACTTTACAGAACTGCACCGCCTTTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: FGSKLSICLSTT*TTLQNCTAFSF Trigger: AAAAGAAAAGGCGGTGCAGTTCTGTAAAGTGGTTCATGTAGTGGATAAACATATACTCAGTTTTGATCCGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 72 bp | AAGGCATTGATGACATTCCCAAGAGCTAAAAGAGATTaGTTAATATTTGTGCCTTCTACAAATCGTGACCCT | + |
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Preference number: 6 (lower is better) Translates to: KALMTFPRAKRD*LIFVPSTNRDP Trigger: AGGGTCACGATTTGTAGAAGGCACAAATATTAACAAATCTCTTTTAGCTCTTGGGAATGTCATCAATGCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 90 bp | CTGTGCAATTGTATCCATTCAGAAAACTATGAAGGATTGGCTTGGTaGTGTGTTCAAAAACTTCCATTTGAGTTGAAGTTTCATCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LCNCIHSENYEGLAW*CVQKLPFELKFHQR Trigger: TCTTTGATGAAACTTCAACTCAAATGGAAGTTTTTGAACACACAACCAAGCCAATCCTTCATAGTTTTCTGAATGGATACAATTGCACAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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| CDS CAA 72 bp | TGTATCCATTCAGAAAACTATGAAGGATTGGCTTGGTaGTGTGTTCAAAAACTTCCATTTGAGTTGAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: CIHSENYEGLAW*CVQKLPFELKF Trigger: AAACTTCAACTCAAATGGAAGTTTTTGAACACACAACCAAGCCAATCCTTCATAGTTTTCTGAATGGATACA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028527.8 |
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