RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF16B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038844

Ensembl transcript IDs: ENSMUST00000043589.8, ENSMUST00000211861.2, ENSMUST00000212106.2, ENSMUST00000230763.2

Found 639 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCCAAACTCAGGCACTAGATATGGTGTGAGAGGTGGTCTGGGCTaGCTGCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCC +
Preference number: 1 (lower is better)
Translates to: LPNSGTRYGVRGGLG*LLHVATTGGGKLES
Trigger: GGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGCAGCCAGCCCAGACCACCTCTCACACCATATCTAGTGCCTGAGTTTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR GCA 90 bp ACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCACTCTaGATCAGAGTCTATTTGATGAGAAGGCACTGTGTTGGTGGTTCC +
Preference number: 1 (lower is better)
Translates to: TTGGGKLESWCRSPL*IRVYLMRRHCVGGS
Trigger: GGAACCACCAACACAGTGCCTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR GCA 90 bp GCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCAATCAGAGTTaGCCTTGGCAGGCAAGCACCCACTCCCAAACTCAGGCACTAGAT +
Preference number: 1 (lower is better)
Translates to: ATFKCRGTVTTVNQS*PWQASTHSQTQALD
Trigger: ATCTAGTGCCTGAGTTTGGGAGTGGGTGCTTGCCTGCCAAGGGCAACTCTGATTGACAGTTGTTACTGTACCTCTGCACTTGAACGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CCA 90 bp TCAGAGAATAGCTTTGTTTTCAGATGGGGCCAAGGTCTGGGTGGATaGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCAGAGCTAGT +
Preference number: 1 (lower is better)
Translates to: SENSFVFRWGQGLGG*SDWSRPLLALARAS
Trigger: ACTAGCTCTGGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCCCCATCTGAAAACAAAGCTATTCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CCA 90 bp CAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGATaGGGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTG +
Preference number: 1 (lower is better)
Translates to: QAGARIISENSFVFR*GQGLGGWSDWSRPL
Trigger: CAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCCCCATCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CCA 90 bp TTCAAGTGCAGAGGTACAGTAACAACTGTCAATCAGAGTTGCCCTTaGCAGGCAAGCACCCACTCCCAAACTCAGGCACTAGATATGGTG +
Preference number: 1 (lower is better)
Translates to: FKCRGTVTTVNQSCP*QASTHSQTQALDMV
Trigger: CACCATATCTAGTGCCTGAGTTTGGGAGTGGGTGCTTGCCTGCCAAGGGCAACTCTGATTGACAGTTGTTACTGTACCTCTGCACTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR TCA 90 bp CTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTCCATaGTTCCTGTACATGGAGGTCTTCAGCTGGACCAACCGGAATAAT +
Preference number: 1 (lower is better)
Translates to: LRPIISPIVSSRGTP*FLYMEVFSWTNRNN
Trigger: ATTATTCCGGTTGGTCCAGCTGAAGACCTCCATGTACAGGAATCATGGAGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR TCA 90 bp CTGAGCACTACCATGCATTTGATACAAGGAAGATCTCCTTGTGACTaGTCATCACAAATACACTCTTTACTCTTGCCAAATAGCACACGT +
Preference number: 1 (lower is better)
Translates to: LSTTMHLIQGRSPCD*SSQIHSLLLPNSTR
Trigger: ACGTGTGCTATTTGGCAAGAGTAAAGAGTGTATTTGTGATGATCAGTCACAAGGAGATCTTCCTTGTATCAAATGCATGGTAGTGCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CCA 90 bp TTCTGCAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATaGAAGACTCTTCTCATGATTGGCCTACAGATCCTTTTTACTGAA +
Preference number: 1 (lower is better)
Translates to: FCKFLQCCLHPICQA*KTLLMIGLQILFTE
Trigger: TTCAGTAAAAAGGATCTGTAGGCCAATCATGAGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTGCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR TCA 90 bp AATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTCATaGTTGGCCTACAGATCCTTTTTACTGAACAGGACATTCTATGTA +
Preference number: 1 (lower is better)
Translates to: NVAYIQFVRHGRLFS*LAYRSFLLNRTFYV
Trigger: TACATAGAATGTCCTGTTCAGTAAAAAGGATCTGTAGGCCAATCATGAGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR GCA 90 bp CCTCAAATAGTGAAGGTTAAACAATGTCTTATTTGTAGGGATTTCTaGAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGG +
Preference number: 1 (lower is better)
Translates to: PQIVKVKQCLICRDF*KFLQCCLHPICQAW
Trigger: CCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTGCAGAAATCCCTACAAATAAGACATTGTTTAACCTTCACTATTTGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR GCA 90 bp AAACAATGTCTTATTTGTAGGGATTTCTGCAAGTTTCTGCAATGTTaGCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTCATGATT +
Preference number: 1 (lower is better)
Translates to: KQCLICRDFCKFLQC*LHPICQAWKTLLMI
Trigger: AATCATGAGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTGCAGAAATCCCTACAAATAAGACATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCAAGGCCACGTTCAAGTaGAGAGGTACAGTAACAACT +
Preference number: 2 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAKATFK*RGTVTT
Trigger: AGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTT...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR TCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCGCACTACCATGCATTTaGTACAAGGAAGATCTCCTT +
Preference number: 2 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAALPCI*YKEDLL
Trigger: AAGGAGATCTTCCTTGTATCAAATGCATGGTAGTGC...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCCCTTATAGGGCTAGCTaGATCTTCCAACATTCTTGT +
Preference number: 2 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAPYRAS*IFQHSC
Trigger: ACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGG...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR TCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCAGGAAGATCTCCTTGTaGCTGATCATCACAAATACA +
Preference number: 2 (lower is better)
Translates to: GQGLGGWSDWSRPLLALARKISL*LIITNT
Trigger: TGTATTTGTGATGATCAGTCACAAGGAGATCTTCCT...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGAGTCTGGGCTGGCTGCTaGATGTTGCCACAACTGGAG +
Preference number: 2 (lower is better)
Translates to: SNILVSLERSAVRACSRRVWAGC*MLPQLE
Trigger: CTCCAGTTGTGGCAACATGCAGCAGCCAGCCCAGAC...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGAGGCAAGCTGGAATCCTaGTGCAGGAGTCCACTCTGC +
Preference number: 2 (lower is better)
Translates to: LLLIGLAASSNILVSLERGKLES*CRSPLC
Trigger: GCAGAGTGGACTCCTGCACCAGGATTCCAGCTTGCC...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CAA 90 bp AACCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTaGTTTTCAGATGGGGCCAAGGTCTGGGTGGATGGAGTGACTGGT +
Preference number: 2 (lower is better)
Translates to: NQRSKRELESSQRIA*FSDGAKVWVDGVTG
Trigger: ACCAGTCACTCCATCCACCCAGACCTTGGCCCCATCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGACTGGCTGCTGCATGTTaGCACAACTGGAGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: LLLIGLAASSNILVSLERLAAAC*HNWRRQ
Trigger: TTGCCTCCTCCAGTTGTGGCAACATGCAGCAGCCAG...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGAGCCACACATCCATCCTaGCACAGGGGATTGACTTGC +
Preference number: 2 (lower is better)
Translates to: LLLIGLAASSNILVSLERATHPS*HRGLTC
Trigger: GCAAGTCAATCCCCTGTGGCAGGATGGATGTGTGGC...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCATTTGTAGGGATTTCTaGAAGTTTCTGCAATGTTGC +
Preference number: 2 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAICRDF*KFLQCC
Trigger: GCAACATTGCAGAAACTTGCAGAAATCCCTACAAAT...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTGGCAAGCTGGAATCCTaGTGCAGGAGTCCACTCTGC +
Preference number: 2 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCGKLES*CRSPLC
Trigger: GCAGAGTGGACTCCTGCACCAGGATTCCAGCTTGCC...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CAA 90 bp GTTCAAGTGCAGAGGTACAGTAACAACTGTCAATCAGAGTTGCCCTaGGCAGGCAAGCACCCACTCCCAAACTCAGGCACTAGATATGGT +
Preference number: 2 (lower is better)
Translates to: VQVQRYSNNCQSELP*AGKHPLPNSGTRYG
Trigger: ACCATATCTAGTGCCTGAGTTTGGGAGTGGGTGCTTGCCTGCCAAGGGCAACTCTGATTGACAGTTGTTACTGTACCTCTGCACTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCTGGCTGCTGCATGTTaGCACAACTGGAGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCLAAAC*HNWRRQ
Trigger: TTGCCTCCTCCAGTTGTGGCAACATGCAGCAGCCAG...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACGCCACACATCCATCCTaGCACAGGGGATTGACTTGC +
Preference number: 2 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYATHPS*HRGLTC
Trigger: GCAAGTCAATCCCCTGTGGCAGGATGGATGTGTGGC...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCATAATTTTAACAAAATaGTCACCAAGAGCCCACCTT +
Preference number: 2 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAIILTK*SPRAHL
Trigger: AAGGTGGGCTCTTGGTGAGCATTTTGTTAAAATTAT...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGAATATGGTGTGAGAGGTaGTCTGGGCTGGCTGCTGCA +
Preference number: 2 (lower is better)
Translates to: PEVQAGARIISENSFVFRIWCER*SGLAAA
Trigger: TGCAGCAGCCAGCCCAGACCACCTCTCACACCATAT...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CAA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTaGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGACTGAATGCA +
Preference number: 2 (lower is better)
Translates to: LLLIGLAASSNILVS*ERSAVRACSRRLNA
Trigger: TGCATTCAGTCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CCA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTAGCTTTGTTTTCAGATaGGGCCAAGGTCTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTSFVFR*GQGLGG
Trigger: TCCACCCAGACCTTGGCCCCATCTGAAAACAAAGCT...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR TCA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTCTTCCAACATTCTTGTaGGCTTGGAGAGATCTGCTG +
Preference number: 2 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTLPTFL*AWRDLL
Trigger: CAGCAGATCTCTCCAAGCTCACAAGAATGTTGGAAG...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR TCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACGCACTACCATGCATTTaGTACAAGGAAGATCTCCTT +
Preference number: 2 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYALPCI*YKEDLL
Trigger: AAGGAGATCTTCCTTGTATCAAATGCATGGTAGTGC...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTTGCAGGAGTCCACTCTaGATCAGAGTCTATTTGATG +
Preference number: 2 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTCRSPL*IRVYLM
Trigger: CATCAAATAGACTCTGATGCAGAGTGGACTCCTGCA...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGAGCCTATAATCGAGACTaGAGAGAGAAGCATACACTT +
Preference number: 2 (lower is better)
Translates to: PEVQAGARIISENSFVFRAYNRD*REKHTL
Trigger: AAGTGTATGCTTCTCTCTCCAGTCTCGATTATAGGC...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR TCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACTCACTGTACACGATGTaGAATGCTACATTATGTCCT +
Preference number: 2 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYSLYTM*NATLCP
Trigger: AGGACATAATGTAGCATTTCACATCGTGTACAGTGA...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR TCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGAATTTACTCAAGCCAATaGGGGATAGTTTTCAGCACT +
Preference number: 2 (lower is better)
Translates to: PEVQAGARIISENSFVFRIYSSQ*GIVFST
Trigger: AGTGCTGAAAACTATCCCTCATTGGCTTGAGTAAAT...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR TCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACAGGAAGATCTCCTTGTaGCTGATCATCACAAATACA +
Preference number: 2 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYRKISL*LIITNT
Trigger: TGTATTTGTGATGATCAGTCACAAGGAGATCTTCCT...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGAAAGTTTCTGCAATGTTaGCTACATCCAATTTGTCAG +
Preference number: 2 (lower is better)
Translates to: SNILVSLERSAVRACSRRKFLQC*LHPICQ
Trigger: CTGACAAATTGGATGTAGGCAACATTGCAGAAACTT...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGAATTTGTAGGGATTTCTaGAAGTTTCTGCAATGTTGC +
Preference number: 2 (lower is better)
Translates to: SNILVSLERSAVRACSRRICRDF*KFLQCC
Trigger: GCAACATTGCAGAAACTTGCAGAAATCCCTACAAAT...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR TCA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTAAAAAGGAAACCAGATaGAAGTCACTTAAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTKKETR*KSLKGG
Trigger: ACCACCCTTAAGTGACTTTCATCTGGTTTCCTTTTT...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGAAAGTTTCTGCAATGTTaGCTACATCCAATTTGTCAG +
Preference number: 2 (lower is better)
Translates to: PEVQAGARIISENSFVFRKFLQC*LHPICQ
Trigger: CTGACAAATTGGATGTAGGCAACATTGCAGAAACTT...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGAATTTCTGCAAGTTTCTaGAATGTTGCCTACATCCAA +
Preference number: 2 (lower is better)
Translates to: PEVQAGARIISENSFVFRISASF*NVAYIQ
Trigger: TTGGATGTAGGCAACATTGCAGAAACTTGCAGAAAT...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGAGGATATTTAAAAGATTaGATCCAGCTTTGCACTTGT +
Preference number: 2 (lower is better)
Translates to: SNILVSLERSAVRACSRRGYLKD*IQLCTC
Trigger: ACAAGTGCAAAGCTGGATGCAATCTTTTAAATATCC...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR TCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTAAAAAGGAAACCAGATaGAAGTCACTTAAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSKKETR*KSLKGG
Trigger: ACCACCCTTAAGTGACTTTCATCTGGTTTCCTTTTT...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTAGGTCTAAAAGAAACTaGCCTGTATCTCTAAATGTC +
Preference number: 2 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLRSKRN*PVSLNV
Trigger: GACATTTAGAGATACAGGGCAGTTTCTTTTAGACCT...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
3UTR GCA 72 bp TGGTGTGAGAGGTGGTCTGGGCTGGCTGCTGCATGTTaGCACAACTGGAGGAGGCAAGCTGGAATCCTGGTG +
Preference number: 3 (lower is better)
Translates to: WCERWSGLAAAC*HNWRRQAGILV
Trigger: CACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGCAGCCAGCCCAGACCACCTCTCACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CCA 72 bp GGCTGCTGCATGTTGCCACAACTGGAGGAGGCAAGCTaGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAG +
Preference number: 3 (lower is better)
Translates to: GCCMLPQLEEAS*NPGAGVHSASE
Trigger: CTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGCAGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CCA 72 bp TCAGGCACTAGATATGGTGTGAGAGGTGGTCTGGGCTaGCTGCTGCATGTTGCCACAACTGGAGGAGGCAAG +
Preference number: 3 (lower is better)
Translates to: SGTRYGVRGGLG*LLHVATTGGGK
Trigger: CTTGCCTCCTCCAGTTGTGGCAACATGCAGCAGCCAGCCCAGACCACCTCTCACACCATATCTAGTGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CCA 72 bp CAGAGAATAGCTTTGTTTTCAGATGGGGCCAAGGTCTaGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGG +
Preference number: 3 (lower is better)
Translates to: QRIALFSDGAKV*VDGVTGPGLCW
Trigger: CCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCCCCATCTGAAAACAAAGCTATTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR GCA 72 bp CAAGCCACACATCCATCCTGCCACAGGGGATTGACTTaGTGTACTATGGGAAAGGCCACGTTCAAGTGCAGA +
Preference number: 3 (lower is better)
Translates to: QATHPSCHRGLT*CTMGKATFKCR
Trigger: TCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAAGTCAATCCCCTGTGGCAGGATGGATGTGTGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CAA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACGCTGGCTGCTGCATGTaGCCACAACTGGAGGAGGCA +
Preference number: 3 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYAGCCM*PQLEEA
Trigger: TGCCTCCTCCAGTTGTGGCAACATGCAGCAGCCAGC...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CAA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTGCTGGCTGCTGCATGTaGCCACAACTGGAGGAGGCA +
Preference number: 3 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSAGCCM*PQLEEA
Trigger: TGCCTCCTCCAGTTGTGGCAACATGCAGCAGCCAGC...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CAA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGATCCTGCCACAGGGGATaGACTTGCTGTACTATGGGA +
Preference number: 3 (lower is better)
Translates to: SNILVSLERSAVRACSRRSCHRG*TCCTMG
Trigger: TCCCATAGTACAGCAAGTCAATCCCCTGTGGCAGGA...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR TCA 72 bp ATAAGCAAGCCACACATCCATCCTGCCACAGGGGATTaGCTTGCTGTACTATGGGAAAGGCCACGTTCAAGT +
Preference number: 3 (lower is better)
Translates to: ISKPHIHPATGD*LAVLWERPRSS
Trigger: ACTTGAACGTGGCCTTTCCCATAGTACAGCAAGTCAATCCCCTGTGGCAGGATGGATGTGTGGCTTGCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CCA 72 bp GCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGATaGGGCCAAGGTCTGGGTGGATGGAGTGACTGGTCC +
Preference number: 3 (lower is better)
Translates to: ARIISENSFVFR*GQGLGGWSDWS
Trigger: GGACCAGTCACTCCATCCACCCAGACCTTGGCCCCATCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CAA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACAACTGTCAATCAGAGTaGCCCTTGGCAGGCAAGCAC +
Preference number: 3 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYNCQSE*PLAGKH
Trigger: GTGCTTGCCTGCCAAGGGCAACTCTGATTGACAGTT...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CAA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACTTGCCTACATCCAATTaGTCAGGCATGGAAGACTCT +
Preference number: 3 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYLPTSN*SGMEDS
Trigger: AGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAA...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR TCA 72 bp ATCATCTCTCCTATTGTTAGCTCAAGAGGAACTCCATaGTTCCTGTACATGGAGGTCTTCAGCTGGACCAAC +
Preference number: 3 (lower is better)
Translates to: IISPIVSSRGTP*FLYMEVFSWTN
Trigger: GTTGGTCCAGCTGAAGACCTCCATGTACAGGAATCATGGAGTTCCTCTTGAGCTAACAATAGGAGAGATGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CAA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGACAAGTTTCTGCAATGTaGCCTACATCCAATTTGTCA +
Preference number: 3 (lower is better)
Translates to: LLLIGLAASSNILVSLERQVSAM*PTSNLS
Trigger: TGACAAATTGGATGTAGGCAACATTGCAGAAACTTG...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CAA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGACATCCAGCTTTGCACTaGTTTTATGCAGAAAAAGCT +
Preference number: 3 (lower is better)
Translates to: LLLIGLAASSNILVSLERHPALH*FYAEKA
Trigger: AGCTTTTTCTGCATAAAACAAGTGCAAAGCTGGATG...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CAA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGAAGATTGCATCCAGCTTaGCACTTGTTTTATGCAGAA +
Preference number: 3 (lower is better)
Translates to: LLLIGLAASSNILVSLERRLHPA*HLFYAE
Trigger: TTCTGCATAAAACAAGTGCAAAGCTGGATGCAATCT...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CCA 72 bp TTGTTAGCTCAAGAGGAACTCCATGATTCCTGTACATaGAGGTCTTCAGCTGGACCAACCGGAATAATTAAC +
Preference number: 3 (lower is better)
Translates to: LLAQEELHDSCT*RSSAGPTGIIN
Trigger: GTTAATTATTCCGGTTGGTCCAGCTGAAGACCTCCATGTACAGGAATCATGGAGTTCCTCTTGAGCTAACAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CAA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACAGATTGCATCCAGCTTaGCACTTGTTTTATGCAGAA +
Preference number: 3 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYRLHPA*HLFYAE
Trigger: TTCTGCATAAAACAAGTGCAAAGCTGGATGCAATCT...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR TCA 72 bp TGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGACTaGATGCAAGCATGTTTTGTTATCCATTCATTTGTG +
Preference number: 3 (lower is better)
Translates to: WRDLLCGHVLED*MQACFVIHSFV
Trigger: CACAAATGAATGGATAACAAAACATGCTTGCATTCAGTCTTCTAGAACATGCCCGCACAGCAGATCTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR TCA 72 bp TACATCCAATTTGTCAGGCATGGAAGACTCTTCTCATaGTTGGCCTACAGATCCTTTTTACTGAACAGGACA +
Preference number: 3 (lower is better)
Translates to: YIQFVRHGRLFS*LAYRSFLLNRT
Trigger: TGTCCTGTTCAGTAAAAAGGATCTGTAGGCCAATCATGAGAAGAGTCTTCCATGCCTGACAAATTGGATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CAA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTAGGATATTTAAAAGATaGCATCCAGCTTTGCACTTG +
Preference number: 3 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTRIFKR*HPALHL
Trigger: CAAGTGCAAAGCTGGATGCAATCTTTTAAATATCCT...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR GCA 72 bp CTTATTTGTAGGGATTTCTGCAAGTTTCTGCAATGTTaGCTACATCCAATTTGTCAGGCATGGAAGACTCTT +
Preference number: 3 (lower is better)
Translates to: LICRDFCKFLQC*LHPICQAWKTL
Trigger: AAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTGCAGAAATCCCTACAAATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR-3UTR CAA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTCAAGTTTCTGCAATGTaGCCTACATCCAATTTGTCA +
Preference number: 3 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGQVSAM*PTSNLS
Trigger: TGACAAATTGGATGTAGGCAACATTGCAGAAACTTG...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR TCA 72 bp ACCATGCATTTGATACAAGGAAGATCTCCTTGTGACTaGTCATCACAAATACACTCTTTACTCTTGCCAAAT +
Preference number: 3 (lower is better)
Translates to: TMHLIQGRSPCD*SSQIHSLLLPN
Trigger: ATTTGGCAAGAGTAAAGAGTGTATTTGTGATGATCAGTCACAAGGAGATCTTCCTTGTATCAAATGCATGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCAGGGTGGAGCACCGCTaGAGGGCAGAGCGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESRVEHR*RAERLC
Trigger: GCAGAGGCGCTCTGCCCTGCAGCGGTGCTCCACCCT...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCGGCACCGGTGGCATCTaGCCGCTCACTTCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAGTGGI*PLTSSK
Trigger: CTTGCTGGAAGTGAGCGGGCAGATGCCACCGGTGCC...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCACTGGCCTGCCACCCTaGCCATTCACTGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: GQGLGGWSDWSRPLLALATGLPP*PFTGVE
Trigger: CTCCACACCAGTGAATGGTCAGGGTGGCAGGCCAGT...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCAGGTGTGCCACCCGCTaGACCTGCTCCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESRCATR*TCSFSS
Trigger: GGAGGAGAAGGAGCAGGTGCAGCGGGTGGCACACCT...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCACTGGCCTGCCACCCTaGCCATTCACTGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESTGLPP*PFTGVE
Trigger: CTCCACACCAGTGAATGGTCAGGGTGGCAGGCCAGT...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCTTCTGCCTCTGCTCCTaGATCTCCAGGTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAFCLCS*ISRSRV
Trigger: CACCCTGGACCTGGAGATCCAGGAGCAGAGGCAGAA...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCAAGCTCTCTTCCTCCTaGCTCCTCTGCTGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAKLSSS*LLCCSS
Trigger: ACTCGAGCAGCAGAGGAGGCAGGAGGAAGAGAGCTT...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCGCTCGGGTCACCCCCTaGGTCACATTTTACATGCTC +
Preference number: 4 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAARVTP*VTFYML
Trigger: GAGCATGTAAAATGTGACGCAGGGGGTGACCCGAGC...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCCTGTTTCCTTGCGCCTaGTCTCTACCTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GQGLGGWSDWSRPLLALALFPCA*SLPPAA
Trigger: TGCAGCAGGAGGTAGAGACCAGGCGCAAGGAAACAG...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCCGGAGCTGTTGCAGCTaGCTAGCATTAGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GQGLGGWSDWSRPLLALARSCCS*LALAWY
Trigger: GTACCAGGCTAATGCTAGCCAGCTGCAACAGCTCCG...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGAGGGTGGAGCACCGCTaGAGGGCAGAGCGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKRVEHR*RAERLC
Trigger: GCAGAGGCGCTCTGCCCTGCAGCGGTGCTCCACCCT...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCCCAAGTTTCTGCCTCTaGTCCTGGATCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESPSFCL*SWISRS
Trigger: GGACCTGGAGATCCAGGAGCAGAGGCAGAAACTTGG...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCCGCAGCTTGGCACTCTaGGCATTTTGCTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESRSLAL*AFCSWC
Trigger: GCACCAAGAGCAAAATGCCCAGAGTGCCAAGCTGCG...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCAGGAGGTCTTTCTGTTaGACCAGGTCCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GQGLGGWSDWSRPLLALARRSFC*TRSFSR
Trigger: CCTGGAGAAGGACCTGGTCCAACAGAAAGACCTCCT...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCCGGAGCTGTTGCAGCTaGCTAGCATTAGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESRSCCS*LALAWY
Trigger: GTACCAGGCTAATGCTAGCCAGCTGCAACAGCTCCG...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCCTTGTTCGTGGCTGTTaGGCTCTTGGAGTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: GQGLGGWSDWSRPLLALALVRGC*ALGVCE
Trigger: TTCGCAAACTCCAAGAGCTCAACAGCCACGAACAAG...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCCCCACTTTGTTGATGTaGAGGGGAGATGTCTCGGAC +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESPTLLM*RGDVSD
Trigger: GTCCGAGACATCTCCCCTTCACATCAACAAAGTGGG...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCCTACTTGGCAGAGAGTaGTGTCTAGGCCTAGGACAC +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESLLGRE*CLGLGH
Trigger: GTGTCCTAGGCCTAGACACCACTCTCTGCCAAGTAG...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCAACGACTGTAGCGCCTaGATACAGTCCATGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GQGLGGWSDWSRPLLALANDCSA*IQSMSH
Trigger: ATGAGACATGGACTGTATTCAGGCGCTACAGTCGTT...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCGCGATTGATATTTCCTaGGTCCATGAGTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAAIDIS*VHEFLH
Trigger: GTGGAGGAACTCATGGACGCAGGAAATATCAATCGC...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCCTGCTCCTCCAGGTGTaGCACCCGCTGCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVLLLQV*HPLHLL
Trigger: GAGCAGGTGCAGCGGGTGGCACACCTGGAGGAGCAG...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCGCCCACCGAGAATGTTaGCATCATCTGTTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESAHREC*HHLLPR
Trigger: TCTTGGCAACAGATGATGGCAACATTCTCGGTGGGC...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCTGGTACTGTGCGATCTaGTCTTCTTTCTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAWYCAI*SSFSPT
Trigger: AGTGGGAGAGAAAGAAGAGCAGATCGCACAGTACCA...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCCACAGCCTGCTCCAATaGCTCTCTTTGCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESHSLLQ*LSLLFL
Trigger: GAGAAACAGCAAAGAGAGGCATTGGAGCAGGCTGTG...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCGTGGCATCCACAATCTaGACACCATTCACAGAGCAT +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESVASTI*TPFTEH
Trigger: ATGCTCTGTGAATGGTGTTCAGATTGTGGATGCCAC...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCGCGATTGATATTTCCTaGGTCCATGAGTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESAIDIS*VHEFLH
Trigger: GTGGAGGAACTCATGGACGCAGGAAATATCAATCGC...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGAGGCACCGGTGGCATCTaGCCGCTCACTTCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SNILVSLERSAVRACSRRGTGGI*PLTSSK
Trigger: CTTGCTGGAAGTGAGCGGGCAGATGCCACCGGTGCC...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCTCCTGCCTCCTCTGCTaGTCGAGTCCCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVSCLLC*SSPCCS
Trigger: GGAGCAGCAGGGACTCGAGCAGCAGAGGAGGCAGGA...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCAAAGGGCTTCCCGGATaGTTTCCAGTTCCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESKGLPG*FPVPSF
Trigger: AAAAGAGGGAACTGGAAAGCATCCGGGAAGCCCTTT...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCGCTTACGTTGAGTGGTaGCATTGTGAAGTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAAYVEW*HCEVPH
Trigger: ATGAGGAACTTCACAATGGCACCACTCAACGTAAGC...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACTCCTCTTGGGCCCGCTaGGCCTCTCCAGGACACAGC +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYSSWAR*ASPGHS
Trigger: GCTGTGTCCTGGAGAGGCCCAGCGGGCCCAAGAGGA...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCACTTCTTTCTCTACTTaGCAGAGAGTGGTGTCTAGG +
Preference number: 4 (lower is better)
Translates to: GQGLGGWSDWSRPLLALATSFST*QRVVSR
Trigger: CCTAGACACCACTCTCTGCCAAGTAGAGAAAGAAGT...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGGTTTCCCCCACTGGGTaGCAAGCTGGAGAGAACGGC +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKVSPTG*QAGENG
Trigger: GCCGTTCTCTCCAGCTTGCCACCCAGTGGGGGAAAC...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CAA 72 bp GCAAGCCACACATCCATCCTGCCACAGGGGATTGACTaGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: ASHTSILPQGID*LYYGKGHVQVQ
Trigger: CTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAAGTCAATCCCCTGTGGCAGGATGGATGTGTGGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGCGTGGGACCTGCTACTaGCATCATTCATCCCCGTCG +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKRGTCY*HHSSPS
Trigger: CGACGGGGATGAATGATGTCAGTAGCAGGTCCCACG...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGATGCTGCTCGAGTCCCTaGTGCTCCCGAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERCCSSP*CSRSLS
Trigger: AGAGAGGCTTCGGGAGCAGCAGGGACTCGAGCAGCA...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACTCCTGCCTCCTCTGCTaGTCGAGTCCCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYSCLLC*SSPCCS
Trigger: GGAGCAGCAGGGACTCGAGCAGCAGAGGAGGCAGGA...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACAGGTGTGCCACCCGCTaGACCTGCTCCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYRCATR*TCSFSS
Trigger: GGAGGAGAAGGAGCAGGTGCAGCGGGTGGCACACCT...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCGTTGGCATCACCAATTaGCCTGTGCAAATCATGAAG +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESVGITN*PVQIMK
Trigger: CTTCATGATTTGCACAGGGCAATTGGTGATGCCAAC...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGTTTCCCTGCGATTCATaGGCCGGACTCTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKFPCDS*AGLSRP
Trigger: TGGCCGTGAGAGTCCGGCCCATGAATCGCAGGGAAA...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CAA 72 bp CAGAGGTACAGTAACAACTGTCAATCAGAGTTGCCCTaGGCAGGCAAGCACCCACTCCCAAACTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: QRYSNNCQSELP*AGKHPLPNSGT
Trigger: AGTGCCTGAGTTTGGGAGTGGGTGCTTGCCTGCCAAGGGCAACTCTGATTGACAGTTGTTACTGTACCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACGGAAGCTGCGGCGTTTaGGGCTTTCCTCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYGSCGV*GFPPAC
Trigger: GCAAGCAGGAGGAAAGCCTCAAACGCCGCAGCTTCC...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGAATCAGTGGAGCCAGGTaGGAGTTTCCCCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERISGAR*EFPPLG
Trigger: ACCCAGTGGGGGAAACTCTCACCTGGCTCCACTGAT...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCGTTATACAACATGACTaGAGACAGGTTCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESVIQHD*RQVLTG
Trigger: TCCTGTGAGAACCTGTCTGCAGTCATGTTGTATAAC...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTCTGCTCCTCCAGGTGTaGCACCCGCTGCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSLLLQV*HPLHLL
Trigger: GAGCAGGTGCAGCGGGTGGCACACCTGGAGGAGCAG...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGAGTGGCCCGGAGCTGTTaGAGCTGGCTAGCATTAGCC +
Preference number: 4 (lower is better)
Translates to: PEVQAGARIISENSFVFRVARSC*SWLALA
Trigger: GGCTAATGCTAGCCAGCTGCAACAGCTCCGGGCCAC...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACGTGGCCCGGAGCTGTTaGAGCTGGCTAGCATTAGCC +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYVARSC*SWLALA
Trigger: GGCTAATGCTAGCCAGCTGCAACAGCTCCGGGCCAC...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCTTAGCTTACGTTGAGTaGTGCCATTGTGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESLAYVE*CHCEVP
Trigger: AGGAACTTCACAATGGCACCACTCAACGTAAGCTAA...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCCTTGCTTCATTCTGGTaGAGTTTTTCCTCCATACTT +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESLASFW*SFSSIL
Trigger: AAGTATGGAGGAAAAACTTCACCAGAATGAAGCAAG...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCTTTCTTGAAGAATGGTaGGAATTCACAAATGGTGTG +
Preference number: 4 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAFLEEW*EFTNGV
Trigger: CACACCATTTGTGAATTCTCACCATTCTTCAAGAAA...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCTCCAGTTTGCCCATATaGAAAGACACAAGCATTGTA +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESSSLPI*KDTSIV
Trigger: TACAATGCTTGTGTCTTTGCATATGGGCAAACTGGA...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGAGGCTTTCCTCCTGCTTaGGGATTTGCCGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERGFPPA*GFAAAQ
Trigger: TTGTGCAGCGGCAAATCCGCAAGCAGGAGGAAAGCC...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGAGGGTGGAGCACCGCTaGAGGGCAGAGCGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMRVEHR*RAERLC
Trigger: GCAGAGGCGCTCTGCCCTGCAGCGGTGCTCCACCCT...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGATTTCCCTGCGATTCATaGGCCGGACTCTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: PEVQAGARIISENSFVFRFPCDS*AGLSRP
Trigger: TGGCCGTGAGAGTCCGGCCCATGAATCGCAGGGAAA...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCTGTTTGTCCATTCCTTaGTCAATTCTTGGACTCTTG +
Preference number: 4 (lower is better)
Translates to: AACCHNWRRQAGILVQESCLSIP*SILGLL
Trigger: CAAGAGTCCAAGAATTGACCAAGGAATGGACAAACA...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGCCATTCACAGAGCATTaGGACCCTCTCAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKPFTEH*DPLRGI
Trigger: GATACCCCTGAGAGGGTCCCAATGCTCTGTGAATGG...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCCTGTTTCCTTGCGCCTaGTCTCTACCTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVLFPCA*SLPPAA
Trigger: TGCAGCAGGAGGTAGAGACCAGGCGCAAGGAAACAG...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGTGGGCATTTTGCTCTTaGTGCAATCGGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKWAFCS*CNRSSS
Trigger: GGAGCTGGACCGATTGCACCAAGAGCAAAATGCCCA...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGATTCTGCCTCTGCTCCTaGATCTCCAGGTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PEVQAGARIISENSFVFRFCLCS*ISRSRV
Trigger: CACCCTGGACCTGGAGATCCAGGAGCAGAGGCAGAA...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGAGAGAGTTTCCCCCACTaGGTGGCAAGCTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SNILVSLERSAVRACSRRESFPH*VASWRE
Trigger: TTCTCTCCAGCTTGCCACCCAGTGGGGGAAACTCTC...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGACCTGGCATCCATCAGTaGAGCCAGGTGAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: SNILVSLERSAVRACSRRPGIHQ*SQVRVS
Trigger: GGAAACTCTCACCTGGCTCCACTGATGGATGCCAGG...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGACCTGGCATCCATCAGTaGAGCCAGGTGAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERPGIHQ*SQVRVS
Trigger: GGAAACTCTCACCTGGCTCCACTGATGGATGCCAGG...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CAA 72 bp CAAGTGCAGAGGTACAGTAACAACTGTCAATCAGAGTaGCCCTTGGCAGGCAAGCACCCACTCCCAAACTCA +
Preference number: 4 (lower is better)
Translates to: QVQRYSNNCQSE*PLAGKHPLPNS
Trigger: TGAGTTTGGGAGTGGGTGCTTGCCTGCCAAGGGCAACTCTGATTGACAGTTGTTACTGTACCTCTGCACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CAA 72 bp GATAAGCAAGCCACACATCCATCCTGCCACAGGGGATaGACTTGCTGTACTATGGGAAAGGCCACGTTCAAG +
Preference number: 4 (lower is better)
Translates to: DKQATHPSCHRG*TCCTMGKATFK
Trigger: CTTGAACGTGGCCTTTCCCATAGTACAGCAAGTCAATCCCCTGTGGCAGGATGGATGTGTGGCTTGCTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGAGCCCTGTGCAAATCATaGAGGCGTCTCTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: SNILVSLERSAVRACSRRALCKS*RRLWTS
Trigger: AGAAGTCCAGAGACGCCTTCATGATTTGCACAGGGC...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGTCCTGCTTGCGGATTTaGCGCTGCACAATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKSCLRI*RCTISV
Trigger: AACAGAGATTGTGCAGCGGCAAATCCGCAAGCAGGA...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGAGTTGCCATCATCTGTTaGCAAGAAGCTCGGGTCACC +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERVAIIC*QEARVT
Trigger: GGTGACCCGAGCTTCTTGGCAACAGATGATGGCAAC...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCCAAGTTTCTGCCTCTaGTCCTGGATCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCPSFCL*SWISRS
Trigger: GGACCTGGAGATCCAGGAGCAGAGGCAGAAACTTGG...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGATGGGCATTTTGCTCTTaGTGCAATCGGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SNILVSLERSAVRACSRRWAFCS*CNRSSS
Trigger: GGAGCTGGACCGATTGCACCAAGAGCAAAATGCCCA...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGACGCAGCTTGGCACTCTaGGCATTTTGCTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PEVQAGARIISENSFVFRRSLAL*AFCSWC
Trigger: GCACCAAGAGCAAAATGCCCAGAGTGCCAAGCTGCG...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTTCCTCTTGGGCCCGCTaGGCCTCTCCAGGACACAGC +
Preference number: 4 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGSSWAR*ASPGHS
Trigger: GCTGTGTCCTGGAGAGGCCCAGCGGGCCCAAGAGGA...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGGACCATTCACTGGTGTaGAGAGAGCCAAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKDHSLV*REPSFC
Trigger: GCAGAAACTTGGCTCTCTCCACACCAGTGAATGGTC...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTGTTTCCCCCACTGGGTaGCAAGCTGGAGAGAACGGC +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSVSPTG*QAGENG
Trigger: GCCGTTCTCTCCAGCTTGCCACCCAGTGGGGGAAAC...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACGAGAGTTTCCCCCACTaGGTGGCAAGCTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYESFPH*VASWRE
Trigger: TTCTCTCCAGCTTGCCACCCAGTGGGGGAAACTCTC...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CAA 72 bp TCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTaGTTTTCAGATGGGGCCAAGGTCTGGGTGGATGGA +
Preference number: 4 (lower is better)
Translates to: SKRELESSQRIA*FSDGAKVWVDG
Trigger: TCCATCCACCCAGACCTTGGCCCCATCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGACAATGCCCTCTTTCCTaGGGGCTAGAGTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SNILVSLERSAVRACSRRQCPLS*GLEFAL
Trigger: AAGAGCAAACTCTAGCCCTCAGGAAAGAGGGCATTG...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCCAGCCAGCAGGTCCTTaGGCTTGTTTTCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVQPAGP*ACFQCG
Trigger: TCCACATTGAAAACAAGCTCAAGGACCTGCTGGCTG...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGTGCGAAGCTCTTCTCTaGTGCGGAATAAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKCEALL*CGISSL
Trigger: AAGAGAGCTTATTCCGCATCAGAGAAGAGCTTCGCA...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGACTTGTTCGTGGCTGTTaGGCTCTTGGAGTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: SNILVSLERSAVRACSRRLVRGC*ALGVCE
Trigger: TTCGCAAACTCCAAGAGCTCAACAGCCACGAACAAG...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTATCAGTGGAGCCAGGTaGGAGTTTCCCCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSISGAR*EFPPLG
Trigger: ACCCAGTGGGGGAAACTCTCACCTGGCTCCACTGAT...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGCTTCAATGTAAGCACTaGTCCTGGCATCCATCAGTG +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKLQCKH*SWHPSV
Trigger: CACTGATGGATGCCAGGATCAGTGCTTACATTGAAG...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTGCCCTGTGCAAATCATaGAGGCGTCTCTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCALCKS*RRLWTS
Trigger: AGAAGTCCAGAGACGCCTTCATGATTTGCACAGGGC...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGGGCACCGGTGGCATCTaGCCGCTCACTTCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMGTGGI*PLTSSK
Trigger: CTTGCTGGAAGTGAGCGGGCAGATGCCACCGGTGCC...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTCCTGCCTCCTCTGCTaGTCGAGTCCCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMSCLLC*SSPCCS
Trigger: GGAGCAGCAGGGACTCGAGCAGCAGAGGAGGCAGGA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGACTCATCTCTTTGGCCTaGAAAAGGGCTTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: PEVQAGARIISENSFVFRLISLA*KRASRM
Trigger: CATCCGGGAAGCCCTTTTGCAGGCCAAAGAGATGAG...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCTCATCTCTTTGGCCTaGAAAAGGGCTTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCLISLA*KRASRM
Trigger: CATCCGGGAAGCCCTTTTGCAGGCCAAAGAGATGAG...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACGTTGCCATCATCTGTTaGCAAGAAGCTCGGGTCACC +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYVAIIC*QEARVT
Trigger: GGTGACCCGAGCTTCTTGGCAACAGATGATGGCAAC...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCGCCCACCGAGAATGTTaGCATCATCTGTTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVAHREC*HHLLPR
Trigger: TCTTGGCAACAGATGATGGCAACATTCTCGGTGGGC...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGGCATCAAGCACTCTCTaGTTTTCTTCCAGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKASSTL*FSSSRA
Trigger: AGCTCTGCTGGAAGAAAAGCAGAGAGTGCTTGATGC...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGAATTCACAAATGGTGTaGTTGGACAGGGTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKNSQMV*LDRVSP
Trigger: GGGACTGACCCTGTCCAAGCACACCATTTGTGAATT...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCATGGTGAAGATGGCGTaGGACCTGCTACTGACATCA +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVMVKMA*DLLLTS
Trigger: TGATGTCAGTAGCAGGTCCCACGCCATCTTCACCAT...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACCCATTCACAGAGCATTaGGACCCTCTCAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYPFTEH*DPLRGI
Trigger: GATACCCCTGAGAGGGTCCCAATGCTCTGTGAATGG...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCGCGGCTTCCTTCGGATaGTTAAAGCGGAACATGTTG +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVAASFG*LKRNML
Trigger: CAACATGTTCCGCTTTAACCATCCGAAGGAAGCCGC...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGACAGCTCTCATCTCTTTaGCCTGCAAAAGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PEVQAGARIISENSFVFRQLSSL*PAKGLP
Trigger: GGGAAGCCCTTTTGCAGGCCAAAGAGATGAGAGCTG...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCTACTTGGCAGAGAGTaGTGTCTAGGCCTAGGACAC +
Preference number: 4 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCLLGRE*CLGLGH
Trigger: GTGTCCTAGGCCTAGACACCACTCTCTGCCAAGTAG...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGAGACCATTCACTGGTGTaGAGAGAGCCAAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERDHSLV*REPSFC
Trigger: GCAGAAACTTGGCTCTCTCCACACCAGTGAATGGTC...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGACACAAATGGTGTGCTTaGACAGGGTCAGTCCCACTT +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERHKWCA*TGSVPL
Trigger: AAGTGGGACTGACCCTGTCCAAGCACACCATTTGTG...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CAA 72 bp ATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTaGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: IGLAASSNILVS*ERSAVRACSRR
Trigger: TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGTCCAAGTCAAGGCCATaGAGGACAATATCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKSKSRP*RTISCS
Trigger: AGAGCAAGATATTGTCCTTCATGGCCTTGACTTGGA...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGACAGGGTTATACAACATaGCTGCAGACAGGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERQGYTT*LQTGSH
Trigger: GTGAGAACCTGTCTGCAGTCATGTTGTATAACCCTG...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCCAGGGTTATACAACATaGCTGCAGACAGGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVQGYTT*LQTGSH
Trigger: GTGAGAACCTGTCTGCAGTCATGTTGTATAACCCTG...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTGGAAGCTGCGGCGTTTaGGGCTTTCCTCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGGSCGV*GFPPAC
Trigger: GCAAGCAGGAGGAAAGCCTCAAACGCCGCAGCTTCC...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCAGCCAGCAGGTCCTTaGGCTTGTTTTCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCQPAGP*ACFQCG
Trigger: TCCACATTGAAAACAAGCTCAAGGACCTGCTGGCTG...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCTGCGAAGCTCTTCTCTaGTGCGGAATAAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVCEALL*CGISSL
Trigger: AAGAGAGCTTATTCCGCATCAGAGAAGAGCTTCGCA...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGATCTAAGAAGTACTGCTaGGCCCTTTCCAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERSKKYC*ALSSSS
Trigger: GGATGAACTGGAAAGGGCTCAGCAGTACTTCTTAGA...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGACTTCAATGTAAGCACTaGTCCTGGCATCCATCAGTG +
Preference number: 4 (lower is better)
Translates to: SNILVSLERSAVRACSRRLQCKH*SWHPSV
Trigger: CACTGATGGATGCCAGGATCAGTGCTTACATTGAAG...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGAAACGACTGTAGCGCCTaGATACAGTCCATGTCTCAT +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERNDCSA*IQSMSH
Trigger: ATGAGACATGGACTGTATTCAGGCGCTACAGTCGTT...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGTTCTCAAAGACACAGTaGTCACTCTCCAAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKFSKTQ*SLSKSR
Trigger: CCTTGACTTGGAGAGTGAGCACTGTGTCTTTGAGAA...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCAATCTCTGTTTCCTTaGGCCTGGTCTCTACCTCCT +
Preference number: 4 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCQSLFP*AWSLPP
Trigger: AGGAGGTAGAGACCAGGCGCAAGGAAACAGAGATTG...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACTCCTGCTTGCGGATTTaGCGCTGCACAATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYSCLRI*RCTISV
Trigger: AACAGAGATTGTGCAGCGGCAAATCCGCAAGCAGGA...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTAAGCTCTCTTCCTCCTaGCTCCTCTGCTGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSKLSSS*LLCCSS
Trigger: ACTCGAGCAGCAGAGGAGGCAGGAGGAAGAGAGCTT...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCTGCTCCTCCAGGTGTaGCACCCGCTGCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLLLLQV*HPLHLL
Trigger: GAGCAGGTGCAGCGGGTGGCACACCTGGAGGAGCAG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTGCTCGGGTCACCCCCTaGGTCACATTTTACATGCTC +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSARVTP*VTFYML
Trigger: GAGCATGTAAAATGTGACGCAGGGGGTGACCCGAGC...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGATTAGCCTGGTACTGTaGGATCTGCTCTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKISLVL*DLLFFL
Trigger: GAGAAAGAAGAGCAGATCGCACAGTACCAGGCTAAT...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGGTGGCCCGGAGCTGTTaGAGCTGGCTAGCATTAGCC +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMVARSC*SWLALA
Trigger: GGCTAATGCTAGCCAGCTGCAACAGCTCCGGGCCAC...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACTCCAATGCCTCTCTTTaGTGTTTCTCCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYSNASL*CFSWDS
Trigger: GGAGTCCCAGGAGAAACAGCAAAGAGAGGCATTGGA...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTAGAGAGCCAAGTTTCTaGCTCTGCTCCTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTREPSF*LCSWIS
Trigger: GGAGATCCAGGAGCAGAGGCAGAAACTTGGCTCTCT...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCGTACGGTCCTTCTTTaGGATGCTCACGGACTCTTA +
Preference number: 4 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCRTVLL*DAHGLL
Trigger: TAAGAGTCCGTGAGCATCCCAAAGAAGGACCGTACG...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACCGTACGGTCCTTCTTTaGGATGCTCACGGACTCTTA +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYRTVLL*DAHGLL
Trigger: TAAGAGTCCGTGAGCATCCCAAAGAAGGACCGTACG...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCAGCTTGTTTTCAATGTaGAAGCTGCGGCGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVSLFSM*KLRRLR
Trigger: CCTCAAACGCCGCAGCTTCCACATTGAAAACAAGCT...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCTTCTCAGCTTGTTCGTaGCTGTTGAGCTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVFSACS*LLSSWS
Trigger: ACTCCAAGAGCTCAACAGCCACGAACAAGCTGAGAA...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTCCTCTTGGGCCCGCTaGGCCTCTCCAGGACACAGC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLSSWAR*ASPGHS
Trigger: GCTGTGTCCTGGAGAGGCCCAGCGGGCCCAAGAGGA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGATCCAAACAGCTTCTTTaGGGGGAATTCAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SNILVSLERSAVRACSRRSKQLL*GEFKSS
Trigger: GCTGCTCTTGAATTCCCCCCAAAGAAGCTGTTTGGA...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACCACAAATGGTGTGCTTaGACAGGGTCAGTCCCACTT +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYHKWCA*TGSVPL
Trigger: AAGTGGGACTGACCCTGTCCAAGCACACCATTTGTG...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGTTGCTTTTCTCCATTTaGATGATGAACTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKLLFSI*MMNLAS
Trigger: GGAGGCCAAGTTCATCATTCAAATGGAGAAAAGCAA...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACAAGAGAAGTCATAGGTaGAGGTCTTGGTCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYKRSHR*RSWSVL
Trigger: GAGAACGGACCAAGACCTTCACCTATGACTTCTCTT...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTCGTGGGACCTGCTACTaGCATCATTCATCCCCGTCG +
Preference number: 4 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGRGTCY*HHSSPS
Trigger: CGACGGGGATGAATGATGTCAGTAGCAGGTCCCACG...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCGTGGGACCTGCTACTaGCATCATTCATCCCCGTCG +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMRGTCY*HHSSPS
Trigger: CGACGGGGATGAATGATGTCAGTAGCAGGTCCCACG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGACAGCCAAGTCAAAACTaGATCCCTGTAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERQPSQN*IPVRHK
Trigger: TTTGTGCCTTACAGGGATTCAGTTTTGACTTGGCTG...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTCAATGCCCTCTTTCCTaGGGGCTAGAGTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTQCPLS*GLEFAL
Trigger: AAGAGCAAACTCTAGCCCTCAGGAAAGAGGGCATTG...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACGTGGCATCCACAATCTaGACACCATTCACAGAGCAT +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYVASTI*TPFTEH
Trigger: ATGCTCTGTGAATGGTGTTCAGATTGTGGATGCCAC...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTGTTCTCACAGGACTTTaGGAGGTCGGTCATAGACAA +
Preference number: 4 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCVLTGL*EVGHRQ
Trigger: TTGTCTATGACCGACCTCTCAAAGTCCTGTGAGAAC...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTTCTAAGAAGTACTGCTaGGCCCTTTCCAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCSKKYC*ALSSSS
Trigger: GGATGAACTGGAAAGGGCTCAGCAGTACTTCTTAGA...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTCGACGAGGTGGATCTTaGTCACAGTTTCACATGGCA +
Preference number: 4 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTRRGGS*SQFHMA
Trigger: TGCCATGTGAAACTGTGAGCAAGATCCACCTCGTCG...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTAGGTGTGCCACCCGCTaGACCTGCTCCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLRCATR*TCSFSS
Trigger: GGAGGAGAAGGAGCAGGTGCAGCGGGTGGCACACCT...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGGCGTCACATTTTACATaGTCCAGAGCTACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKASHFT*SRATFS
Trigger: AGAGAAAGTAGCTCTGGAGCATGTAAAATGTGACGC...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGATGGTACTGTGCGATCTaGTCTTCTTTCTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: PEVQAGARIISENSFVFRWYCAI*SSFSPT
Trigger: AGTGGGAGAGAAAGAAGAGCAGATCGCACAGTACCA...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGAATTAGCCTGGTACTGTaGGATCTGCTCTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERISLVL*DLLFFL
Trigger: GAGAAAGAAGAGCAGATCGCACAGTACCAGGCTAAT...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCGTTGGCATCACCAATTaGCCTGTGCAAATCATGAAG +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVVGITN*PVQIMK
Trigger: CTTCATGATTTGCACAGGGCAATTGGTGATGCCAAC...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGAAATTCACAAATGGTGTaGTTGGACAGGGTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PEVQAGARIISENSFVFRNSQMV*LDRVSP
Trigger: GGGACTGACCCTGTCCAAGCACACCATTTGTGAATT...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTTTCCCTGCGATTCATaGGCCGGACTCTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMFPCDS*AGLSRP
Trigger: TGGCCGTGAGAGTCCGGCCCATGAATCGCAGGGAAA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTAGCTTGTTTTCAATGTaGAAGCTGCGGCGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCSLFSM*KLRRLR
Trigger: CCTCAAACGCCGCAGCTTCCACATTGAAAACAAGCT...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTTGGCTGTTGAGCTCTTaGAGTTTGCGAAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCWLLSS*SLRSSS
Trigger: AGAAGAGCTTCGCAAACTCCAAGAGCTCAACAGCCA...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACTGGCTGTTGAGCTCTTaGAGTTTGCGAAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYWLLSS*SLRSSS
Trigger: AGAAGAGCTTCGCAAACTCCAAGAGCTCAACAGCCA...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACTTCTCAGCTTGTTCGTaGCTGTTGAGCTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYFSACS*LLSSWS
Trigger: ACTCCAAGAGCTCAACAGCCACGAACAAGCTGAGAA...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTCAGCTCTCATCTCTTTaGCCTGCAAAAGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSQLSSL*PAKGLP
Trigger: GGGAAGCCCTTTTGCAGGCCAAAGAGATGAGAGCTG...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTACCCTGACCATTCACTaGTGTGGAGAGAGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTTLTIH*CGESQV
Trigger: AACTTGGCTCTCTCCACACCAGTGAATGGTCAGGGT...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGTTAGCTTACGTTGAGTaGTGCCATTGTGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKLAYVE*CHCEVP
Trigger: AGGAACTTCACAATGGCACCACTCAACGTAAGCTAA...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGATCCAAACAGCTTCTTTaGGGGGAATTCAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PEVQAGARIISENSFVFRSKQLL*GEFKSS
Trigger: GCTGCTCTTGAATTCCCCCCAAAGAAGCTGTTTGGA...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCTTGCTTTTCTCCATTTaGATGATGAACTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVLLFSI*MMNLAS
Trigger: GGAGGCCAAGTTCATCATTCAAATGGAGAAAAGCAA...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGCTGTACCCAGAGTTTTaGAAACCATTTCTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: AGILVQESTLHQSLFDEKLYPEF*KPFLVR
Trigger: TCTCACAAGAAATGGTTTTCAAAACTCTGGGTACAG...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGAATTGACATCAGCAGGTaGAATGGTGGCAATCATGAT +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERIDISR*NGGNHD
Trigger: ATCATGATTGCCACCATTTCACCTGCTGATGTCAAT...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCATTGACATCAGCAGGTaGAATGGTGGCAATCATGAT +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVIDISR*NGGNHD
Trigger: ATCATGATTGCCACCATTTCACCTGCTGATGTCAAT...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGACCTCCATCTCCTCAATaGGTTTCCTTTTACTTTCGA +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERPPSPQ*VSFYFR
Trigger: TCGAAAGTAAAAGGAAACTCATTGAGGAGATGGAGG...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTGGAAGCTGCGGCGTTTaGGGCTTTCCTCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLGSCGV*GFPPAC
Trigger: GCAAGCAGGAGGAAAGCCTCAAACGCCGCAGCTTCC...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTACTGGCCTGCCACCCTaGCCATTCACTGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLTGLPP*PFTGVE
Trigger: CTCCACACCAGTGAATGGTCAGGGTGGCAGGCCAGT...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACGGTCCTTCTTTGGGATaGTCACGGACTCTTAAATTG +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYGPSLG*SRTLKL
Trigger: CAATTTAAGAGTCCGTGAGCATCCCAAAGAAGGACC...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGATTCAGCGTCGAATTTTaGCTGAGTGAACTTGATGGT +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERFSVEF*LSELDG
Trigger: ACCATCAAGTTCACTCAGGCAAAATTCGACGCTGAA...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTGAAGATCATCATCAATaGCAATTAGGTGCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCEDHHQ*QLGAAA
Trigger: AGCTGCCGCACCTAATTGGCATTGATGATGATCTTC...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACTTCTCAAAGACACAGTaGTCACTCTCCAAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYFSKTQ*SLSKSR
Trigger: CCTTGACTTGGAGAGTGAGCACTGTGTCTTTGAGAA...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGAGTTATACAACATGACTaGAGACAGGTTCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: SNILVSLERSAVRACSRRVIQHD*RQVLTG
Trigger: TCCTGTGAGAACCTGTCTGCAGTCATGTTGTATAAC...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTCAATCTCTGTTTCCTTaGGCCTGGTCTCTACCTCCT +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSQSLFP*AWSLPP
Trigger: AGGAGGTAGAGACCAGGCGCAAGGAAACAGAGATTG...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTGGCTTTCCTCCTGCTTaGGGATTTGCCGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGGFPPA*GFAAAQ
Trigger: TTGTGCAGCGGCAAATCCGCAAGCAGGAGGAAAGCC...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTGCTGCTCGAGTCCCTaGTGCTCCCGAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLCCSSP*CSRSLS
Trigger: AGAGAGGCTTCGGGAGCAGCAGGGACTCGAGCAGCA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGAAGCTCTCTTCCTCCTaGCTCCTCTGCTGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMKLSSS*LLCCSS
Trigger: ACTCGAGCAGCAGAGGAGGCAGGAGGAAGAGAGCTT...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTTCCAATGCCTCTCTTTaGTGTTTCTCCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSSNASL*CFSWDS
Trigger: GGAGTCCCAGGAGAAACAGCAAAGAGAGGCATTGGA...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTAGGGTCCATCTCAAGTaGTTCTCCATCAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSRVHLK*FSISLQ
Trigger: CTGGAGACTGATGGAGAAGCACTTGAGATGGACCCT...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGACAGAATTTCCCATCATaGTGTAGGACTTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: SNILVSLERSAVRACSRRQNFPS*CRTFQI
Trigger: GATCTGGAAAGTCCTACACCATGATGGGAAATTCTG...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTATGGTGAAGATGGCGTaGGACCTGCTACTGACATCA +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSMVKMA*DLLLTS
Trigger: TGATGTCAGTAGCAGGTCCCACGCCATCTTCACCAT...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGATCTTCACAAGAGGGTTaGCTGCATCCTGAGATAAAT +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERSSQEG*LHPEIN
Trigger: ATTTATCTCAGGATGCAGCCAACCCTCTTGTGAAGA...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCTCTTCACAAGAGGGTTaGCTGCATCCTGAGATAAAT +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVSSQEG*LHPEIN
Trigger: ATTTATCTCAGGATGCAGCCAACCCTCTTGTGAAGA...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCGGAGCTGTTGCAGCTaGCTAGCATTAGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMRSCCS*LALAWY
Trigger: GTACCAGGCTAATGCTAGCCAGCTGCAACAGCTCCG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTGTTTCCCCCACTGGGTaGCAAGCTGGAGAGAACGGC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLVSPTG*QAGENG
Trigger: GCCGTTCTCTCCAGCTTGCCACCCAGTGGGGGAAAC...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGGAGAGTTTCCCCCACTaGGTGGCAAGCTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMESFPH*VASWRE
Trigger: TTCTCTCCAGCTTGCCACCCAGTGGGGGAAACTCTC...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGACTGTACCCAGAGTTTTaGAAACCATTTCTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERLYPEF*KPFLVR
Trigger: TCTCACAAGAAATGGTTTTCAAAACTCTGGGTACAG...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCTCAAGTGATACAAGATaGTTCCAGTGCTCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVSSDTR*FQCSED
Trigger: ATCTTCTGAGCACTGGAATCATCTTGTATCACTTGA...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCATCTTCTGCTTCAGCTaGTGGATTTCATGTTCTAAC +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVIFCFS*WISCSN
Trigger: GTTAGAACATGAAATCCATCAGCTGAAGCAGAAGAT...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTATCAGTGGAGCCAGGTaGGAGTTTCCCCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLISGAR*EFPPLG
Trigger: ACCCAGTGGGGGAAACTCTCACCTGGCTCCACTGAT...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGGCCCTGTGCAAATCATaGAGGCGTCTCTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMALCKS*RRLWTS
Trigger: AGAAGTCCAGAGACGCCTTCATGATTTGCACAGGGC...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTCCCACTTTGTTGATGTaGAGGGGAGATGTCTCGGAC +
Preference number: 4 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGPTLLM*RGDVSD
Trigger: GTCCGAGACATCTCCCCTTCACATCAACAAAGTGGG...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTTCAGTCCCACTTTGTTaGTGTGAAGGGGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSSVPLC*CEGEMS
Trigger: AGACATCTCCCCTTCACATCAACAAAGTGGGACTGA...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGATCCAGTTTGCCCATATaGAAAGACACAAGCATTGTA +
Preference number: 4 (lower is better)
Translates to: SNILVSLERSAVRACSRRSSLPI*KDTSIV
Trigger: TACAATGCTTGTGTCTTTGCATATGGGCAAACTGGA...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACTTCAGCGTCGAATTTTaGCTGAGTGAACTTGATGGT +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYFSVEF*LSELDG
Trigger: ACCATCAAGTTCACTCAGGCAAAATTCGACGCTGAA...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTAAAGGGCTTCCCGGATaGTTTCCAGTTCCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSKGLPG*FPVPSF
Trigger: AAAAGAGGGAACTGGAAAGCATCCGGGAAGCCCTTT...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCTCATCTCTTTGGCCTaGAAAAGGGCTTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMLISLA*KRASRM
Trigger: CATCCGGGAAGCCCTTTTGCAGGCCAAAGAGATGAG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTAGAGAGCCAAGTTTCTaGCTCTGCTCCTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGREPSF*LCSWIS
Trigger: GGAGATCCAGGAGCAGAGGCAGAAACTTGGCTCTCT...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTGCTTACGTTGAGTGGTaGCATTGTGAAGTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTAYVEW*HCEVPH
Trigger: ATGAGGAACTTCACAATGGCACCACTCAACGTAAGC...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACCAGAATTTCCCATCATaGTGTAGGACTTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYQNFPS*CRTFQI
Trigger: GATCTGGAAAGTCCTACACCATGATGGGAAATTCTG...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGATCCTTGGTCAATTCTTaGACTCTTGCTTCATTCTGG +
Preference number: 4 (lower is better)
Translates to: PEVQAGARIISENSFVFRSLVNS*TLASFW
Trigger: CCAGAATGAAGCAAGAGTCCAAGAATTGACCAAGGA...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCCATTCACAGAGCATTaGGACCCTCTCAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMPFTEH*DPLRGI
Trigger: GATACCCCTGAGAGGGTCCCAATGCTCTGTGAATGG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGAGGAGGTCTTTCTGTTaGACCAGGTCCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMRRSFC*TRSFSR
Trigger: CCTGGAGAAGGACCTGGTCCAACAGAAAGACCTCCT...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCTACTTGGCAGAGAGTaGTGTCTAGGCCTAGGACAC +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMLLGRE*CLGLGH
Trigger: GTGTCCTAGGCCTAGACACCACTCTCTGCCAAGTAG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCTTTGCTGTTTCTCCTaGGACTCCAGTATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCLCCFS*DSSISF
Trigger: AAAGGAAATACTGGAGTCCCAGGAGAAACAGCAAAG...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTTCTGCCTCTGCTCCTaGATCTCCAGGTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLFCLCS*ISRSRV
Trigger: CACCCTGGACCTGGAGATCCAGGAGCAGAGGCAGAA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTCAGCCAAGTCAAAACTaGATCCCTGTAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSQPSQN*IPVRHK
Trigger: TTTGTGCCTTACAGGGATTCAGTTTTGACTTGGCTG...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCTTGCTTCATTCTGGTaGAGTTTTTCCTCCATACTT +
Preference number: 4 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCLASFW*SFSSIL
Trigger: AAGTATGGAGGAAAAACTTCACCAGAATGAAGCAAG...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGATCAAGTGATACAAGATaGTTCCAGTGCTCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: PEVQAGARIISENSFVFRSSDTR*FQCSED
Trigger: ATCTTCTGAGCACTGGAATCATCTTGTATCACTTGA...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTTCCAAGTCAAGGCCATaGAGGACAATATCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSSKSRP*RTISCS
Trigger: AGAGCAAGATATTGTCCTTCATGGCCTTGACTTGGA...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCAGCCAGCAGGTCCTTaGGCTTGTTTTCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMQPAGP*ACFQCG
Trigger: TCCACATTGAAAACAAGCTCAAGGACCTGCTGGCTG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGATTTCTTGAAGAATGGTaGGAATTCACAAATGGTGTG +
Preference number: 4 (lower is better)
Translates to: LLLIGLAASSNILVSLERFLEEW*EFTNGV
Trigger: CACACCATTTGTGAATTCTCACCATTCTTCAAGAAA...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCGACGAGGTGGATCTTaGTCACAGTTTCACATGGCA +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMRRGGS*SQFHMA
Trigger: TGCCATGTGAAACTGTGAGCAAGATCCACCTCGTCG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCCAATTCTTGGACTCTTaGTTCATTCTGGTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVQFLDS*FILVKF
Trigger: AAACTTCACCAGAATGAAGCAAGAGTCCAAGAATTG...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTGAAGATCATCATCAATaGCAATTAGGTGCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSEDHHQ*QLGAAA
Trigger: AGCTGCCGCACCTAATTGGCATTGATGATGATCTTC...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCAATCTCTGTTTCCTTaGGCCTGGTCTCTACCTCCT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMQSLFP*AWSLPP
Trigger: AGGAGGTAGAGACCAGGCGCAAGGAAACAGAGATTG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTGGCTTTCCTCCTGCTTaGGGATTTGCCGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLGFPPA*GFAAAQ
Trigger: TTGTGCAGCGGCAAATCCGCAAGCAGGAGGAAAGCC...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGACTTCTTGGACTTCTTTaGTTAGGAGGTCTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: PEVQAGARIISENSFVFRLLGLL*LGGLSV
Trigger: AACAGAAAGACCTCCTAAGCAAAGAAGTCCAAGAAG...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACCTTCTTGGACTTCTTTaGTTAGGAGGTCTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYLLGLL*LGGLSV
Trigger: AACAGAAAGACCTCCTAAGCAAAGAAGTCCAAGAAG...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTGCTCGGGTCACCCCCTaGGTCACATTTTACATGCTC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLARVTP*VTFYML
Trigger: GAGCATGTAAAATGTGACGCAGGGGGTGACCCGAGC...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGGCCCACCGAGAATGTTaGCATCATCTGTTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMAHREC*HHLLPR
Trigger: TCTTGGCAACAGATGATGGCAACATTCTCGGTGGGC...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTCCAATGCCTCTCTTTaGTGTTTCTCCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMSNASL*CFSWDS
Trigger: GGAGTCCCAGGAGAAACAGCAAAGAGAGGCATTGGA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCACAGCCTGCTCCAATaGCTCTCTTTGCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMHSLLQ*LSLLFL
Trigger: GAGAAACAGCAAAGAGAGGCATTGGAGCAGGCTGTG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCCAAGTTTCTGCCTCTaGTCCTGGATCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLPSFCL*SWISRS
Trigger: GGACCTGGAGATCCAGGAGCAGAGGCAGAAACTTGG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTAGGGTCCATCTCAAGTaGTTCTCCATCAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGRVHLK*FSISLQ
Trigger: CTGGAGACTGATGGAGAAGCACTTGAGATGGACCCT...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGACATAATCTGGACTCTTaGTGTCAGCAGAATAAAAAG +
Preference number: 4 (lower is better)
Translates to: SNILVSLERSAVRACSRRHNLDS*CQQNKK
Trigger: CTTTTTATTCTGCTGACACCAAGAGTCCAGATTATG...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACTCTGGACTAAATGCTTaGATAAATCCTCAACGTACG +
Preference number: 4 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYSGLNA*INPQRT
Trigger: CGTACGTTGAGGATTTATCCAAGCATTTAGTCCAGA...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGATGTTTGTCCATTCCTTaGTCAATTCTTGGACTCTTG +
Preference number: 4 (lower is better)
Translates to: PEVQAGARIISENSFVFRCLSIP*SILGLL
Trigger: CAAGAGTCCAAGAATTGACCAAGGAATGGACAAACA...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCTGTTTCCTTGCGCCTaGTCTCTACCTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLLFPCA*SLPPAA
Trigger: TGCAGCAGGAGGTAGAGACCAGGCGCAAGGAAACAG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCGCAGCTTGGCACTCTaGGCATTTTGCTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLRSLAL*AFCSWC
Trigger: GCACCAAGAGCAAAATGCCCAGAGTGCCAAGCTGCG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTCTTTGCTGTTTCTCCTaGGACTCCAGTATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTLCCFS*DSSISF
Trigger: AAAGGAAATACTGGAGTCCCAGGAGAAACAGCAAAG...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGGACCATTCACTGGTGTaGAGAGAGCCAAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMDHSLV*REPSFC
Trigger: GCAGAAACTTGGCTCTCTCCACACCAGTGAATGGTC...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTACCCTGACCATTCACTaGTGTGGAGAGAGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGTLTIH*CGESQV
Trigger: AACTTGGCTCTCTCCACACCAGTGAATGGTCAGGGT...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGACCCTGACCATTCACTaGTGTGGAGAGAGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMTLTIH*CGESQV
Trigger: AACTTGGCTCTCTCCACACCAGTGAATGGTCAGGGT...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCCTGGCATCCATCAGTaGAGCCAGGTGAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLPGIHQ*SQVRVS
Trigger: GGAAACTCTCACCTGGCTCCACTGATGGATGCCAGG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
3UTR CAA 72 bp TTTCTGCAAGTTTCTGCAATGTTGCCTACATCCAATTaGTCAGGCATGGAAGACTCTTCTCATGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: FLQVSAMLPTSN*SGMEDSSHDWP
Trigger: AGGCCAATCATGAGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTGCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
3UTR CAA 72 bp TTCCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATaGTTAGCTCAAGAGGAACTCCATGATTCCTGTACA +
Preference number: 4 (lower is better)
Translates to: FRFVSSDLSSLL*LAQEELHDSCT
Trigger: TGTACAGGAATCATGGAGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGGTGGCATCCACAATCTaGACACCATTCACAGAGCAT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMVASTI*TPFTEH
Trigger: ATGCTCTGTGAATGGTGTTCAGATTGTGGATGCCAC...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGGTTCTCACAGGACTTTaGGAGGTCGGTCATAGACAA +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMVLTGL*EVGHRQ
Trigger: TTGTCTATGACCGACCTCTCAAAGTCCTGTGAGAAC...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTGCGAAGCTCTTCTCTaGTGCGGAATAAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMCEALL*CGISSL
Trigger: AAGAGAGCTTATTCCGCATCAGAGAAGAGCTTCGCA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTATCTTCTGCTTCAGCTaGTGGATTTCATGTTCTAAC +
Preference number: 4 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTIFCFS*WISCSN
Trigger: GTTAGAACATGAAATCCATCAGCTGAAGCAGAAGAT...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCAATTCTTGGACTCTTaGTTCATTCTGGTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCQFLDS*FILVKF
Trigger: AAACTTCACCAGAATGAAGCAAGAGTCCAAGAATTG...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGAAAGGGCTTCCCGGATaGTTTCCAGTTCCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMKGLPG*FPVPSF
Trigger: AAAAGAGGGAACTGGAAAGCATCCGGGAAGCCCTTT...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTGTTGCCATCATCTGTTaGCAAGAAGCTCGGGTCACC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLVAIIC*QEARVT
Trigger: GGTGACCCGAGCTTCTTGGCAACAGATGATGGCAAC...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTAGAGAGCCAAGTTTCTaGCTCTGCTCCTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLREPSF*LCSWIS
Trigger: GGAGATCCAGGAGCAGAGGCAGAAACTTGGCTCTCT...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTGGAGCAAAGGGTGATTaGTGTAGGCAGCAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLGAKGD*CRQQLQ
Trigger: CTGAAGCTGCTGCCTACAGCAATCACCCTTTGCTCC...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTGGCTGTTGAGCTCTTaGAGTTTGCGAAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMWLLSS*SLRSSS
Trigger: AGAAGAGCTTCGCAAACTCCAAGAGCTCAACAGCCA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTGGGCATTTTGCTCTTaGTGCAATCGGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLWAFCS*CNRSSS
Trigger: GGAGCTGGACCGATTGCACCAAGAGCAAAATGCCCA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCAGCTCTCATCTCTTTaGCCTGCAAAAGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLQLSSL*PAKGLP
Trigger: GGGAAGCCCTTTTGCAGGCCAAAGAGATGAGAGCTG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCAATGCCCTCTTTCCTaGGGGCTAGAGTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLQCPLS*GLEFAL
Trigger: AAGAGCAAACTCTAGCCCTCAGGAAAGAGGGCATTG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCTTGTTCGTGGCTGTTaGGCTCTTGGAGTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLLVRGC*ALGVCE
Trigger: TTCGCAAACTCCAAGAGCTCAACAGCCACGAACAAG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTGGGTGTTTAAAAGGATaGATGATAGGCAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLGCLKG*MIGRGH
Trigger: GTGCCCCCTGCCTATCATTCATCCTTTTAAACACCC...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTGACCAGCTCTACCTTTaGCACTTTGTCCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLDQLYL*HFVLLW
Trigger: CCAGAGAAGGACAAAGTGTCAAAGGTAGAGCTGGTC...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTCTGAGGGCTAGAGTTTaGTCTTTCAAAATATTCTGG +
Preference number: 4 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSLRARV*SFKIFW
Trigger: CCAGAATATTTTGAAAGAGCAAACTCTAGCCCTCAG...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGGAAGATCATCATCAATaGCAATTAGGTGCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMEDHHQ*QLGAAA
Trigger: AGCTGCCGCACCTAATTGGCATTGATGATGATCTTC...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTTCTCAAAGACACAGTaGTCACTCTCCAAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMFSKTQ*SLSKSR
Trigger: CCTTGACTTGGAGAGTGAGCACTGTGTCTTTGAGAA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTCCTGCTTGCGGATTTaGCGCTGCACAATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLSCLRI*RCTISV
Trigger: AACAGAGATTGTGCAGCGGCAAATCCGCAAGCAGGA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGATTAGCCTGGTACTGTaGGATCTGCTCTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMISLVL*DLLFFL
Trigger: GAGAAAGAAGAGCAGATCGCACAGTACCAGGCTAAT...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTAGGGTCCATCTCAAGTaGTTCTCCATCAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLRVHLK*FSISLQ
Trigger: CTGGAGACTGATGGAGAAGCACTTGAGATGGACCCT...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGGTTGGCATCACCAATTaGCCTGTGCAAATCATGAAG +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMVGITN*PVQIMK
Trigger: CTTCATGATTTGCACAGGGCAATTGGTGATGCCAAC...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGGCTTACGTTGAGTGGTaGCATTGTGAAGTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMAYVEW*HCEVPH
Trigger: ATGAGGAACTTCACAATGGCACCACTCAACGTAAGC...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCGTACGGTCCTTCTTTaGGATGCTCACGGACTCTTA +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLRTVLL*DAHGLL
Trigger: TAAGAGTCCGTGAGCATCCCAAAGAAGGACCGTACG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTATGGTGAAGATGGCGTaGGACCTGCTACTGACATCA +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLMVKMA*DLLLTS
Trigger: TGATGTCAGTAGCAGGTCCCACGCCATCTTCACCAT...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTGCGGCTTCCTTCGGATaGTTAAAGCGGAACATGTTG +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLAASFG*LKRNML
Trigger: CAACATGTTCCGCTTTAACCATCCGAAGGAAGCCGC...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGACTTCTTTCTCTACTTaGCAGAGAGTGGTGTCTAGG +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMTSFST*QRVVSR
Trigger: CCTAGACACCACTCTCTGCCAAGTAGAGAAAGAAGT...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTACTTCTTTCTCTACTTaGCAGAGAGTGGTGTCTAGG +
Preference number: 4 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGTSFST*QRVVSR
Trigger: CCTAGACACCACTCTCTGCCAAGTAGAGAAAGAAGT...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR TCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTTGCTTTTCTCCATTTaGATGATGAACTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMLLFSI*MMNLAS
Trigger: GGAGGCCAAGTTCATCATTCAAATGGAGAAAAGCAA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTAAGAGAAGTCATAGGTaGAGGTCTTGGTCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLKRSHR*RSWSVL
Trigger: GAGAACGGACCAAGACCTTCACCTATGACTTCTCTT...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCAGGGTTATACAACATaGCTGCAGACAGGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLQGYTT*LQTGSH
Trigger: GTGAGAACCTGTCTGCAGTCATGTTGTATAACCCTG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCCTCCATCTCCTCAATaGGTTTCCTTTTACTTTCGA +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMPPSPQ*VSFYFR
Trigger: TCGAAAGTAAAAGGAAACTCATTGAGGAGATGGAGG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTCTAAGAAGTACTGCTaGGCCCTTTCCAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLSKKYC*ALSSSS
Trigger: GGATGAACTGGAAAGGGCTCAGCAGTACTTCTTAGA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCTTCAATGTAAGCACTaGTCCTGGCATCCATCAGTG +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLLQCKH*SWHPSV
Trigger: CACTGATGGATGCCAGGATCAGTGCTTACATTGAAG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTGCGATTGATATTTCCTaGGTCCATGAGTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLAIDIS*VHEFLH
Trigger: GTGGAGGAACTCATGGACGCAGGAAATATCAATCGC...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTTCAGCGTCGAATTTTaGCTGAGTGAACTTGATGGT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMFSVEF*LSELDG
Trigger: ACCATCAAGTTCACTCAGGCAAAATTCGACGCTGAA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGGTTATACAACATGACTaGAGACAGGTTCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMVIQHD*RQVLTG
Trigger: TCCTGTGAGAACCTGTCTGCAGTCATGTTGTATAAC...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTGCATCAAGCACTCTCTaGTTTTCTTCCAGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLASSTL*FSSSRA
Trigger: AGCTCTGCTGGAAGAAAAGCAGAGAGTGCTTGATGC...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTGGTACTGTGCGATCTaGTCTTCTTTCTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLWYCAI*SSFSPT
Trigger: AGTGGGAGAGAAAGAAGAGCAGATCGCACAGTACCA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTCTTCACAAGAGGGTTaGCTGCATCCTGAGATAAAT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMSSQEG*LHPEIN
Trigger: ATTTATCTCAGGATGCAGCCAACCCTCTTGTGAAGA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTTCCTTGGTCAATTCTTaGACTCTTGCTTCATTCTGG +
Preference number: 4 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGSLVNS*TLASFW
Trigger: CCAGAATGAAGCAAGAGTCCAAGAATTGACCAAGGA...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTAGCTTGTTTTCAATGTaGAAGCTGCGGCGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLSLFSM*KLRRLR
Trigger: CCTCAAACGCCGCAGCTTCCACATTGAAAACAAGCT...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTTCTCAGCTTGTTCGTaGCTGTTGAGCTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLFSACS*LLSSWS
Trigger: ACTCCAAGAGCTCAACAGCCACGAACAAGCTGAGAA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCTTTGCTGTTTCTCCTaGGACTCCAGTATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMLCCFS*DSSISF
Trigger: AAAGGAAATACTGGAGTCCCAGGAGAAACAGCAAAG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTTAGCTTACGTTGAGTaGTGCCATTGTGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMLAYVE*CHCEVP
Trigger: AGGAACTTCACAATGGCACCACTCAACGTAAGCTAA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCCAGAGAAGGGACACTaGCCTCCATATTTCCATGAA +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLPEKGH*PPYFHE
Trigger: TTCATGGAAATATGGAGGCCAGTGTCCCTTCTCTGG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCTCAGGAGTGCCATGTaGGTGTTTAAAAGGATGAAT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMLRSAM*VFKRMN
Trigger: ATTCATCCTTTTAAACACCCACATGGCACTCCTGAG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCAGCCAAGTCAAAACTaGATCCCTGTAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLQPSQN*IPVRHK
Trigger: TTTGTGCCTTACAGGGATTCAGTTTTGACTTGGCTG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTCAAGTGATACAAGATaGTTCCAGTGCTCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMSSDTR*FQCSED
Trigger: ATCTTCTGAGCACTGGAATCATCTTGTATCACTTGA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTCCAAGTCAAGGCCATaGAGGACAATATCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLSKSRP*RTISCS
Trigger: AGAGCAAGATATTGTCCTTCATGGCCTTGACTTGGA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTCCAGTTTGCCCATATaGAAAGACACAAGCATTGTA +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMSSLPI*KDTSIV
Trigger: TACAATGCTTGTGTCTTTGCATATGGGCAAACTGGA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTGGTCCTTCTTTGGGATaGTCACGGACTCTTAAATTG +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLGPSLG*SRTLKL
Trigger: CAATTTAAGAGTCCGTGAGCATCCCAAAGAAGGACC...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTCTGAGGGCTAGAGTTTaGTCTTTCAAAATATTCTGG +
Preference number: 4 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGLRARV*SFKIFW
Trigger: CCAGAATATTTTGAAAGAGCAAACTCTAGCCCTCAG...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTGTTTGTCCATTCCTTaGTCAATTCTTGGACTCTTG +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMCLSIP*SILGLL
Trigger: CAAGAGTCCAAGAATTGACCAAGGAATGGACAAACA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTATTGACATCAGCAGGTaGAATGGTGGCAATCATGAT +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLIDISR*NGGNHD
Trigger: ATCATGATTGCCACCATTTCACCTGCTGATGTCAAT...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTGCGTCACATTTTACATaGTCCAGAGCTACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLASHFT*SRATFS
Trigger: AGAGAAAGTAGCTCTGGAGCATGTAAAATGTGACGC...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCATAATCTGGACTCTTaGTGTCAGCAGAATAAAAAG +
Preference number: 4 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMHNLDS*CQQNKK
Trigger: CTTTTTATTCTGCTGACACCAAGAGTCCAGATTATG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCAGAATTTCCCATCATaGTGTAGGACTTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLQNFPS*CRTFQI
Trigger: GATCTGGAAAGTCCTACACCATGATGGGAAATTCTG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTCCTTGGTCAATTCTTaGACTCTTGCTTCATTCTGG +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLSLVNS*TLASFW
Trigger: CCAGAATGAAGCAAGAGTCCAAGAATTGACCAAGGA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCTGTACCCAGAGTTTTaGAAACCATTTCTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLLYPEF*KPFLVR
Trigger: TCTCACAAGAAATGGTTTTCAAAACTCTGGGTACAG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCTTGCTTCATTCTGGTaGAGTTTTTCCTCCATACTT +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLLASFW*SFSSIL
Trigger: AAGTATGGAGGAAAAACTTCACCAGAATGAAGCAAG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR TCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTATCTTCTGCTTCAGCTaGTGGATTTCATGTTCTAAC +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLIFCFS*WISCSN
Trigger: GTTAGAACATGAAATCCATCAGCTGAAGCAGAAGAT...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCTGAGGGCTAGAGTTTaGTCTTTCAAAATATTCTGG +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLLRARV*SFKIFW
Trigger: CCAGAATATTTTGAAAGAGCAAACTCTAGCCCTCAG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCTTCTTGGACTTCTTTaGTTAGGAGGTCTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLLLGLL*LGGLSV
Trigger: AACAGAAAGACCTCCTAAGCAAAGAAGTCCAAGAAG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTCTGGACTAAATGCTTaGATAAATCCTCAACGTACG +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLSGLNA*INPQRT
Trigger: CGTACGTTGAGGATTTATCCAAGCATTTAGTCCAGA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCACTTTGTCCTTCTCTaGAACTATGACACATCTGAA +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLHFVLL*NYDTSE
Trigger: TTCAGATGTGTCATAGTTCCAGAGAAGGACAAAGTG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR GCA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCAATTCTTGGACTCTTaGTTCATTCTGGTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLQFLDS*FILVKF
Trigger: AAACTTCACCAGAATGAAGCAAGAGTCCAAGAATTG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS GCA 90 bp TTCTGCCTCTGCTCCTGGATCTCCAGGTCCAGGGTGGAGCACCGCTaGAGGGCAGAGCGCCTCTGCTCTAGCTTAGCCACAGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: FCLCSWISRSRVEHR*RAERLCSSLATACS
Trigger: GGAGCAGGCTGTGGCTAAGCTAGAGCAGAGGCGCTCTGCCCTGCAGCGGTGCTCCACCCTGGACCTGGAGATCCAGGAGCAGAGGCAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 90 bp TCTCCAGGACACAGCAGAGGAGCAGTGTCCTGCCTCTTCCGAAGCTaGTCCTCCAGGTGTGCCACCCGCTGCACCTGCTCCTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SPGHSRGAVSCLFRS*SSRCATRCTCSFSS
Trigger: GGAGGAGAAGGAGCAGGTGCAGCGGGTGGCACACCTGGAGGAGCAGCTTCGGAAGAGGCAGGACACTGCTCCTCTGCTGTGTCCTGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 90 bp GCCTGCCACCCTGACCATTCACTGGTGTGGAGAGAGCCAAGTTTCTaGCTCTGCTCCTGGATCTCCAGGTCCAGGGTGGAGCACCGCTGC +
Preference number: 5 (lower is better)
Translates to: ACHPDHSLVWREPSF*LCSWISRSRVEHRC
Trigger: GCAGCGGTGCTCCACCCTGGACCTGGAGATCCAGGAGCAGAGGCAGAAACTTGGCTCTCTCCACACCAGTGAATGGTCAGGGTGGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCTTCCCTCTTTTCCTCTaGGGCCCGCTGGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAFPLFL*GPLGLS
Trigger: GGAGAGGCCCAGCGGGCCCAAGAGGAAAAGAGGGAA...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS GCA 90 bp ATTGCCCCCTTCCTTGAGTCTGACCCCAGTGGCACCGGTGGCATCTaGCCGCTCACTTCCAGCAAGATCGACGAGGTGGATCTTGCTCAC +
Preference number: 5 (lower is better)
Translates to: IAPFLESDPSGTGGI*PLTSSKIDEVDLAH
Trigger: GTGAGCAAGATCCACCTCGTCGATCTTGCTGGAAGTGAGCGGGCAGATGCCACCGGTGCCACTGGGGTCAGACTCAAGGAAGGGGGCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 90 bp CCATCAGTCTCCAGACTGGCCTGCCACCCTGACCATTCACTGGTGTaGAGAGAGCCAAGTTTCTGCCTCTGCTCCTGGATCTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PSVSRLACHPDHSLV*REPSFCLCSWISRS
Trigger: GGACCTGGAGATCCAGGAGCAGAGGCAGAAACTTGGCTCTCTCCACACCAGTGAATGGTCAGGGTGGCAGGCCAGTCTGGAGACTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCCCAGCTCTCATCTCTTaGGCCTGCAAAAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAPALIS*ACKRAS
Trigger: GGAAGCCCTTTTGCAGGCCAAAGAGATGAGAGCTGG...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS GCA 90 bp AAGCTGCGGCGTTTGAGGCTTTCCTCCTGCTTGCGGATTTGCCGCTaGACAATCTCTGTTTCCTTGCGCCTGGTCTCTACCTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: KLRRLRLSSCLRICR*TISVSLRLVSTSCC
Trigger: GCAGCAGGAGGTAGAGACCAGGCGCAAGGAAACAGAGATTGTGCAGCGGCAAATCCGCAAGCAGGAGGAAAGCCTCAAACGCCGCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 90 bp CGGAATAAGCTCTCTTCCTCCTGCCTCCTCTGCTGCTCGAGTCCCTaGTGCTCCCGAAGCCTCTCTTCCTCAAACCTTTCCTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: RNKLSSSCLLCCSSP*CSRSLSSSNLSFSA
Trigger: GGCTGAGAAGGAAAGGTTTGAGGAAGAGAGGCTTCGGGAGCAGCAGGGACTCGAGCAGCAGAGGAGGCAGGAGGAAGAGAGCTTATTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 90 bp CACCGCTGCAGGGCAGAGCGCCTCTGCTCTAGCTTAGCCACAGCCTaGTCCAATGCCTCTCTTTGCTGTTTCTCCTGGGACTCCAGTATT +
Preference number: 5 (lower is better)
Translates to: HRCRAERLCSSLATA*SNASLCCFSWDSSI
Trigger: AATACTGGAGTCCCAGGAGAAACAGCAAAGAGAGGCATTGGAGCAGGCTGTGGCTAAGCTAGAGCAGAGGCGCTCTGCCCTGCAGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCCGCTCTAGTTCTGCCTaGTCCGACTTCTGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: GQGLGGWSDWSRPLLALARSSSA*SDFCFS
Trigger: GGAAAAGCAGAAGTCGGACAAGGCAGAACTAGAGCG...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCTTCTCCAACCGCAGCTaGGCACTCTGGGCATTTTGC +
Preference number: 5 (lower is better)
Translates to: AACCHNWRRQAGILVQESFSNRS*ALWAFC
Trigger: GCAAAATGCCCAGAGTGCCAAGCTGCGGTTGGAGAA...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCTCCAGGCTTGCTAGCTaGACAAGCTGCCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: GQGLGGWSDWSRPLLALASRLAS*TSCLLL
Trigger: CAAGAGAAGGCAGCTTGTCAAGCTAGCAAGCCTGGA...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS GCA 90 bp AATAAGCTCTCTTCCTCCTGCCTCCTCTGCTGCTCGAGTCCCTGCTaGTCCCGAAGCCTCTCTTCCTCAAACCTTTCCTTCTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: NKLSSSCLLCCSSPC*SRSLSSSNLSFSAS
Trigger: GCTGGCTGAGAAGGAAAGGTTTGAGGAAGAGAGGCTTCGGGAGCAGCAGGGACTCGAGCAGCAGAGGAGGCAGGAGGAAGAGAGCTTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 90 bp AGTTTGCGAAGCTCTTCTCTGATGCGGAATAAGCTCTCTTCCTCCTaGCTCCTCTGCTGCTCGAGTCCCTGCTGCTCCCGAAGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: SLRSSSLMRNKLSSS*LLCCSSPCCSRSLS
Trigger: AGAGAGGCTTCGGGAGCAGCAGGGACTCGAGCAGCAGAGGAGGCAGGAGGAAGAGAGCTTATTCCGCATCAGAGAAGAGCTTCGCAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 90 bp TGTCTGGCCACGTTAGCTGTGAACTCGAAGGTGGCCCGGAGCTGTTaGAGCTGGCTAGCATTAGCCTGGTACTGTGCGATCTGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: CLATLAVNSKVARSC*SWLALAWYCAICSS
Trigger: AGAAGAGCAGATCGCACAGTACCAGGCTAATGCTAGCCAGCTGCAACAGCTCCGGGCCACCTTCGAGTTCACAGCTAACGTGGCCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 90 bp CTTCTCCATCAGTCTCCAGACTGGCCTGCCACCCTGACCATTCACTaGTGTGGAGAGAGCCAAGTTTCTGCCTCTGCTCCTGGATCTCCA +
Preference number: 5 (lower is better)
Translates to: LLHQSPDWPATLTIH*CGESQVSASAPGSP
Trigger: TGGAGATCCAGGAGCAGAGGCAGAAACTTGGCTCTCTCCACACCAGTGAATGGTCAGGGTGGCAGGCCAGTCTGGAGACTGATGGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCACCATTCACAGAGCATaGGGACCCTCTCAGGGGTAT +
Preference number: 5 (lower is better)
Translates to: AACCHNWRRQAGILVQESTIHRA*GPSQGY
Trigger: ATACCCCTGAGAGGGTCCCAATGCTCTGTGAATGGT...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCACAATCTCTGTTTCCTaGCGCCTGGTCTCTACCTCC +
Preference number: 5 (lower is better)
Translates to: AACCHNWRRQAGILVQESTISVS*RLVSTS
Trigger: GGAGGTAGAGACCAGGCGCAAGGAAACAGAGATTGT...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS TCA 90 bp GAATGCTCTGCCCACCAAAGCCGACCTGAATCTCCTGCAGTGCAGTaGGAGGGAGAGCATGAAAAGTGCTCATGGAGCCTGGGCAACCAT +
Preference number: 5 (lower is better)
Translates to: ECSAHQSRPESPAVQ*EGEHEKCSWSLGNH
Trigger: ATGGTTGCCCAGGCTCCATGAGCACTTTTCATGCTCTCCCTCTCACTGCACTGCAGGAGATTCAGGTCGGCTTTGGTGGGCAGAGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS GCA 90 bp GAAGATGGCGTGGGACCTGCTACTGACATCATTCATCCCCGTCGCTaGGGTGGTGCGATTGATATTTCCTGCGTCCATGAGTTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: EDGVGPATDIIHPRR*GGAIDISCVHEFLH
Trigger: GTGGAGGAACTCATGGACGCAGGAAATATCAATCGCACCACCGCAGCGACGGGGATGAATGATGTCAGTAGCAGGTCCCACGCCATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 90 bp TCCTCCTCCTCCAGCCTCCTTTTCTCCAACCGCAGCTTGGCACTCTaGGCATTTTGCTCTTGGTGCAATCGGTCCAGCTCCTGGAATATC +
Preference number: 5 (lower is better)
Translates to: SSSSSLLFSNRSLAL*AFCSWCNRSSSWNI
Trigger: GATATTCCAGGAGCTGGACCGATTGCACCAAGAGCAAAATGCCCAGAGTGCCAAGCTGCGGTTGGAGAAAAGGAGGCTGGAGGAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 90 bp GCCACGTTAGCTGTGAACTCGAAGGTGGCCCGGAGCTGTTGCAGCTaGCTAGCATTAGCCTGGTACTGTGCGATCTGCTCTTCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: ATLAVNSKVARSCCS*LALAWYCAICSSFS
Trigger: AGAGAAAGAAGAGCAGATCGCACAGTACCAGGCTAATGCTAGCCAGCTGCAACAGCTCCGGGCCACCTTCGAGTTCACAGCTAACGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCAGGGACTTGTTTATATaGCCCCCTTCCTTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: GQGLGGWSDWSRPLLALARDLFI*PPSLSL
Trigger: CAGACTCAAGGAAGGGGGCAATATAAACAAGTCCCT...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCTCAGGTCGTCTCGATTaGTTCCCAAAGAGCGAGAAT +
Preference number: 5 (lower is better)
Translates to: GQGLGGWSDWSRPLLALASGRLD*FPKSEN
Trigger: ATTCTCGCTCTTTGGGAACAAATCGAGACGACCTGA...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS GCA 90 bp GAGCAAGCATGCAGCCTGGGGGTCAGGCTGGGAGCAGTTAGCAACTaGAAGCCAGTAAATGCCTTTGACAGCCTTCATTATGTCCACAGG +
Preference number: 5 (lower is better)
Translates to: EQACSLGVRLGAVSN*KPVNAFDSLHYVHR
Trigger: CCTGTGGACATAATGAAGGCTGTCAAAGGCATTTACTGGCTTGCAGTTGCTAACTGCTCCCAGCCTGACCCCCAGGCTGCATGCTTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS TCA 90 bp TGCCAATCTGAGTTTCAGGAAGAGGAGGAGGACCTGATGGCACCATaGGTGACCTCAAGGGCAGGTGCTGGGGTAAGTGCTCCAATAATG +
Preference number: 5 (lower is better)
Translates to: CQSEFQEEEEDLMAP*VTSRAGAGVSAPIM
Trigger: CATTATTGGAGCACTTACCCCAGCACCTGCCCTTGAGGTCACTCATGGTGCCATCAGGTCCTCCTCCTCTTCCTGAAACTCAGATTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS TCA 90 bp TGTAGATGTGAAGGCCAAGTTCCTGTGAGGTGCTGTGCTCTTGGCTaGCCTTGGGCTTCCTCCACCTTCACTGTTGAAGCTGCCAATCTG +
Preference number: 5 (lower is better)
Translates to: CRCEGQVPVRCCALG*PWASSTFTVEAANL
Trigger: CAGATTGGCAGCTTCAACAGTGAAGGTGGAGGAAGCCCAAGGTCAGCCAAGAGCACAGCACCTCACAGGAACTTGGCCTTCACATCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS GCA 90 bp CTGCAGTCTTTATTTTGTCTAGATCTGGAGGCCCACCGAGAATGTTaGCATCATCTGTTGCCAAGAAGCTCGGGTCACCCCCTGCGTCAC +
Preference number: 5 (lower is better)
Translates to: LQSLFCLDLEAHREC*HHLLPRSSGHPLRH
Trigger: GTGACGCAGGGGGTGACCCGAGCTTCTTGGCAACAGATGATGGCAACATTCTCGGTGGGCCTCCAGATCTAGACAAAATAAAGACTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 90 bp GCACCGGTGGCATCTGCCCGCTCACTTCCAGCAAGATCGACGAGGTaGATCTTGCTCACAGTTTCACATGGCATTTCAGCGTCGAATTTT +
Preference number: 5 (lower is better)
Translates to: APVASARSLPARSTR*ILLTVSHGISASNF
Trigger: AAAATTCGACGCTGAAATGCCATGTGAAACTGTGAGCAAGATCCACCTCGTCGATCTTGCTGGAAGTGAGCGGGCAGATGCCACCGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCCGGATGAGTTTGACGTaGGCATCCTCATTAATGGTA +
Preference number: 5 (lower is better)
Translates to: AACCHNWRRQAGILVQESRMSLT*ASSLMV
Trigger: TACCATTAATGAGGATGCCAACGTCAAACTCATCCG...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCTGGGTTTCATTCCACTaGTTTGTCCATTCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: AACCHNWRRQAGILVQESWVSFH*FVHSLV
Trigger: GACCAAGGAATGGACAAACAAGTGGAATGAAACCCA...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCTTAAAGCGGAACATGTaGGTTCTTCCCAAGAGTATC +
Preference number: 5 (lower is better)
Translates to: GQGLGGWSDWSRPLLALALKRNM*VLPKSI
Trigger: GATACTCTTGGGAAGAACCAACATGTTCCGCTTTAA...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS TCA 90 bp AGACAGGAATTTGGTGCATCTGTAGATGTGAAGGCCAAGTTCCTGTaGGGTGCTGTGCTCTTGGCTGACCTTGGGCTTCCTCCACCTTCA +
Preference number: 5 (lower is better)
Translates to: RQEFGASVDVKAKFL*GAVLLADLGLPPPS
Trigger: TGAAGGTGGAGGAAGCCCAAGGTCAGCCAAGAGCACAGCACCTCACAGGAACTTGGCCTTCACATCTACAGATGCACCAAATTCCTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS GCA 90 bp TGGCATCTGCCCGCTCACTTCCAGCAAGATCGACGAGGTGGATCTTaGTCACAGTTTCACATGGCATTTCAGCGTCGAATTTTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: WHLPAHFQQDRRGGS*SQFHMAFQRRILPE
Trigger: CTCAGGCAAAATTCGACGCTGAAATGCCATGTGAAACTGTGAGCAAGATCCACCTCGTCGATCTTGCTGGAAGTGAGCGGGCAGATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 90 bp AACCTTTCCTTCTCAGCCAGCAGGTCCTTGAGCTTGTTTTCAATGTaGAAGCTGCGGCGTTTGAGGCTTTCCTCCTGCTTGCGGATTTGC +
Preference number: 5 (lower is better)
Translates to: NLSFSASRSLSLFSM*KLRRLRLSSCLRIC
Trigger: GCAAATCCGCAAGCAGGAGGAAAGCCTCAAACGCCGCAGCTTCCACATTGAAAACAAGCTCAAGGACCTGCTGGCTGAGAAGGAAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 90 bp AATCGGTCCAGCTCCTGGAATATCTGGACCTTCTCAGCTTGTTCGTaGCTGTTGAGCTCTTGGAGTTTGCGAAGCTCTTCTCTGATGCGG +
Preference number: 5 (lower is better)
Translates to: NRSSSWNIWTFSACS*LLSSWSLRSSSLMR
Trigger: CCGCATCAGAGAAGAGCTTCGCAAACTCCAAGAGCTCAACAGCCACGAACAAGCTGAGAAGGTCCAGATATTCCAGGAGCTGGACCGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 90 bp CTTTCAGAGAGAACAAAGCGCAGCACCCTGCTTTGCATAGCTTGCTaGCTTCCTCTGTTTGCTGGCACTTGCTGTGACACGTGTTGCAAC +
Preference number: 5 (lower is better)
Translates to: LSERTKRSTLLCIAC*LPLFAGTCCDTCCN
Trigger: GTTGCAACACGTGTCACAGCAAGTGCCAGCAAACAGAGGAAGCCAGCAAGCTATGCAAAGCAGGGTGCTGCGCTTTGTTCTCTCTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS-3UTR CAA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCTTTGCTTTTCTCCATTaGAATGATGAACTTGGCCTC +
Preference number: 5 (lower is better)
Translates to: GQGLGGWSDWSRPLLALAFAFLH*NDELGL
Trigger: GAGGCCAAGTTCATCATTCAAATGGAGAAAAGCAAA...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GGCCAAGGTCTGGGTGGATGGAGTGACTGGTCCAGGCCTTTGCTGGCTTTAGCCTCAATTCTTGGACTCTaGCTTCATTCTGGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: GQGLGGWSDWSRPLLALASILGL*LHSGEV
Trigger: AACTTCACCAGAATGAAGCAAGAGTCCAAGAATTGA...GGCTAAAGCCAGCAAAGGCCTGGACCAGTCACTCCATCCACCCAGACCTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCTTCCTTGGTCAATTCTaGGACTCTTGCTTCATTCTG +
Preference number: 5 (lower is better)
Translates to: AACCHNWRRQAGILVQESFLGQF*DSCFIL
Trigger: CAGAATGAAGCAAGAGTCCAAGAATTGACCAAGGAA...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCTTAAAGCGGAACATGTaGGTTCTTCCCAAGAGTATC +
Preference number: 5 (lower is better)
Translates to: AACCHNWRRQAGILVQESLKRNM*VLPKSI
Trigger: GATACTCTTGGGAAGAACCAACATGTTCCGCTTTAA...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCCTCTTCTCCCTAAGCTaGGCGGCTTCCTTCGGATGG +
Preference number: 5 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVLFSLS*AASFGW
Trigger: CCATCCGAAGGAAGCCGCCAAGCTTAGGGAGAAGAG...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGACTCTTCTCCCTAAGCTaGGCGGCTTCCTTCGGATGG +
Preference number: 5 (lower is better)
Translates to: LLLIGLAASSNILVSLERLFSLS*AASFGW
Trigger: CCATCCGAAGGAAGCCGCCAAGCTTAGGGAGAAGAG...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS TCA 90 bp TCCAGGGTTATACAACATGACTGCAGACAGGTTCTCACAGGACTTTaGGAGGTCGGTCATAGACAAGCTGAAGGAGGACAGGAGGCCACT +
Preference number: 5 (lower is better)
Translates to: SRVIQHDCRQVLTGL*EVGHRQAEGGQEAT
Trigger: AGTGGCCTCCTGTCCTCCTTCAGCTTGTCTATGACCGACCTCTCAAAGTCCTGTGAGAACCTGTCTGCAGTCATGTTGTATAACCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
CDS TCA 90 bp GCTAGCTTGACAAGCTGCCTTCTCTTGAACTCTAAGAAGTACTGCTaGGCCCTTTCCAGTTCATCCCTACAGGTATGGTCCCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: ASLTSCLLLNSKKYC*ALSSSSLQVWSPPA
Trigger: AGCTGGAGGGGACCATACCTGTAGGGATGAACTGGAAAGGGCTCAGCAGTACTTCTTAGAGTTCAAGAGAAGGCAGCTTGTCAAGCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS TCA 90 bp CCACAGGCTCTGGCAAACAACATGTCATGTGCTCAAGGAGGTCTGTaGGAGGGCACTCTTGAAGCCTCAGCATTTGTTCTGGGAAAGGTA +
Preference number: 5 (lower is better)
Translates to: PQALANNMSCAQGGL*EGTLEASAFVLGKV
Trigger: TACCTTTCCCAGAACAAATGCTGAGGCTTCAAGAGTGCCCTCTCACAGACCTCCTTGAGCACATGACATGTTGTTTGCCAGAGCCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS TCA 90 bp ACCAGGGTTATACAACATGACTGCAGACAGGTTCTCACAGGACTTTaGGAGGTCGGTCATAGACAAGCTGAAGGAGGACAGGAGGCCACT +
Preference number: 5 (lower is better)
Translates to: TRVIQHDCRQVLTGL*EVGHRQAEGGQEAT
Trigger: AGTGGCCTCCTGTCCTCCTTCAGCTTGTCTATGACCGACCTCTCAAAGTCCTGTGAGAACCTGTCTGCAGTCATGTTGTATAACCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230763.2
CDS GCA 90 bp AAGATGATTCCAGTGCTCAGAAGATCATCATCAATGCCAATTAGGTaGGGCAGCTCCGAGTCCAGCACCACACCAATGCCCTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: KMIPVLRRSSSMPIR*GSSESSTTPMPSFL
Trigger: CAGGAAAGAGGGCATTGGTGTGGTGCTGGACTCGGAGCTGCCGCACCTAATTGGCATTGATGATGATCTTCTGAGCACTGGAATCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 90 bp AGGCCACTCTTCCTCTTCTCCCTAAGCTTGGCGGCTTCCTTCGGATaGTTAAAGCGGAACATGTTGGTTCTTCCCAAGAGTATCACAGCA +
Preference number: 5 (lower is better)
Translates to: RPLFLFSLSLAASFG*LKRNMLVLPKSITA
Trigger: TGCTGTGATACTCTTGGGAAGAACCAACATGTTCCGCTTTAACCATCCGAAGGAAGCCGCCAAGCTTAGGGAGAAGAGGAAGAGTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 90 bp TGGGCATTTTGCTCTTGGTGCAATCGGTCCAGCTCCTGGAATATCTaGACCTTCTCAGCTTGTTCGTGGCTGTTGAGCTCTTGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: WAFCSWCNRSSSWNI*TFSACSWLLSSWSL
Trigger: CAAACTCCAAGAGCTCAACAGCCACGAACAAGCTGAGAAGGTCCAGATATTCCAGGAGCTGGACCGATTGCACCAAGAGCAAAATGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 90 bp TTCTCTAAGGACACTGGGAGAGTCAGCAGCATCTTTGGACAGAAGTaGGATAACACACGGTGCAGACCAAGGCTGCCCTGTCTCATACTT +
Preference number: 5 (lower is better)
Translates to: FSKDTGRVSSIFGQK*DNTRCRPRLPCLIL
Trigger: AAGTATGAGACAGGGCAGCCTTGGTCTGCACCGTGTGTTATCCCACTTCTGTCCAAAGATGCTGCTGACTCTCCCAGTGTCCTTAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CCA 90 bp GCCATAGAGAACGCTGTGGAGAGTGAAGTGTTCTGTGACATGAGATaGCTTCTCTGGCTGCTCGGACACATCTCACTCTCTTCTCTAAGG +
Preference number: 5 (lower is better)
Translates to: AIENAVESEVFCDMR*LLWLLGHISLSSLR
Trigger: CCTTAGAGAAGAGAGTGAGATGTGTCCGAGCAGCCAGAGAAGCCATCTCATGTCACAGAACACTTCACTCTCCACAGCGTTCTCTATGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS-3UTR CAA 90 bp GCTGCATGTTGCCACAACTGGAGGAGGCAAGCTGGAATCCTGGTGCAGGAGTCCTTCTGGACTAAATGCTaGGATAAATCCTCAACGTAC +
Preference number: 5 (lower is better)
Translates to: AACCHNWRRQAGILVQESFWTKC*DKSSTY
Trigger: GTACGTTGAGGATTTATCCAAGCATTTAGTCCAGAA...GGACTCCTGCACCAGGATTCCAGCTTGCCTCCTCCAGTTGTGGCAACATGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCGCTGCGGTGGTGCGATaGATATTTCCTGCGTCCATG +
Preference number: 5 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVAAVVR*IFPASM
Trigger: CATGGACGCAGGAAATATCAATCGCACCACCGCAGC...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACTGGAAGCTGCGGCGTTaGAGGCTTTCCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYWKLRR*RLSSCL
Trigger: CAAGCAGGAGGAAAGCCTCAAACGCCGCAGCTTCCA...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGAGGCACTCTGGGCATTTaGCTCTTGGTGCAATCGGTC +
Preference number: 5 (lower is better)
Translates to: LLLIGLAASSNILVSLERGTLGI*LLVQSV
Trigger: GACCGATTGCACCAAGAGCAAAATGCCCAGAGTGCC...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGTCACAAATGGTGTGCTaGGACAGGGTCAGTCCCACT +
Preference number: 5 (lower is better)
Translates to: AGILVQESTLHQSLFDEKSQMVC*DRVSPT
Trigger: AGTGGGACTGACCCTGTCCAAGCACACCATTTGTGA...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS TCA 90 bp TCACAAATGGTGTGCTTGGACAGGGTCAGTCCCACTTTGTTGATGTaGAGGGGAGATGTCTCGGACTGGAGCATCACACTGAAAAACTCC +
Preference number: 5 (lower is better)
Translates to: SQMVCLDRVSPTLLM*RGDVSDWSITLKNS
Trigger: GGAGTTTTTCAGTGTGATGCTCCAGTCCGAGACATCTCCCCTTCACATCAACAAAGTGGGACTGACCCTGTCCAAGCACACCATTTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS GCA 90 bp TCTGTTGCCAAGAAGCTCGGGTCACCCCCTGCGTCACATTTTACATaGTCCAGAGCTACTTTCTCTTCTTGGACTTCTTTGCTTAGGAGG +
Preference number: 5 (lower is better)
Translates to: SVAKKLGSPPASHFT*SRATFSSWTSLLRR
Trigger: CCTCCTAAGCAAAGAAGTCCAAGAAGAGAAAGTAGCTCTGGAGCATGTAAAATGTGACGCAGGGGGTGACCCGAGCTTCTTGGCAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGACGCTCTAGTTCTGCCTaGTCCGACTTCTGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: SNILVSLERSAVRACSRRRSSSA*SDFCFS
Trigger: GGAAAAGCAGAAGTCGGACAAGGCAGAACTAGAGCG...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTTGGAAGCTGCGGCGTTaGAGGCTTTCCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTWKLRR*RLSSCL
Trigger: CAAGCAGGAGGAAAGCCTCAAACGCCGCAGCTTCCA...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTTTCTCCAACCGCAGCTaGGCACTCTGGGCATTTTGC +
Preference number: 5 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCFSNRS*ALWAFC
Trigger: GCAAAATGCCCAGAGTGCCAAGCTGCGGTTGGAGAA...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGACTCCAATGCCTCTCTTaGCTGTTTCTCCTGGGACTC +
Preference number: 5 (lower is better)
Translates to: LLLIGLAASSNILVSLERLQCLS*LFLLGL
Trigger: GAGTCCCAGGAGAAACAGCAAAGAGAGGCATTGGAG...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS GCA 90 bp CCAGGAGGTCCTGGCAGAGCTCATACTTTAGCTTACGTTGAGTGGTaGCATTGTGAAGTTCCTCATTACTCTTCATCACATCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: PGGPGRAHTLAYVEW*HCEVPHYSSSHQQV
Trigger: CACCTGCTGATGTGATGAAGAGTAATGAGGAACTTCACAATGGCACCACTCAACGTAAGCTAAAGTATGAGCTCTGCCAGGACCTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS CCA 90 bp GCTACTTTCTCTTCTTGGACTTCTTTGCTTAGGAGGTCTTTCTGTTaGACCAGGTCCTTCTCCAGGCTTGCTAGCTTGACAAGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: ATFSSWTSLLRRSFC*TRSFSRLASLTSCL
Trigger: AAGGCAGCTTGTCAAGCTAGCAAGCCTGGAGAAGGACCTGGTCCAACAGAAAGACCTCCTAAGCAAAGAAGTCCAAGAAGAGAAAGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 90 bp CCCCCTGCGTCACATTTTACATGCTCCAGAGCTACTTTCTCTTCTTaGACTTCTTTGCTTAGGAGGTCTTTCTGTTGGACCAGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: PPASHFTCSRATFSS*TSLLRRSFCWTRSF
Trigger: GAAGGACCTGGTCCAACAGAAAGACCTCCTAAGCAAAGAAGTCCAAGAAGAGAAAGTAGCTCTGGAGCATGTAAAATGTGACGCAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 90 bp CACCCAGGAGGTCCTGGCAGAGCTCATACTTTAGCTTACGTTGAGTaGTGCCATTGTGAAGTTCCTCATTACTCTTCATCACATCAGCAG +
Preference number: 5 (lower is better)
Translates to: HPGGPGRAHTLAYVE*CHCEVPHYSSSHQQ
Trigger: CTGCTGATGTGATGAAGAGTAATGAGGAACTTCACAATGGCACCACTCAACGTAAGCTAAAGTATGAGCTCTGCCAGGACCTCCTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS CCA 90 bp AAGCCAGTAAATGCCTTTGACAGCCTTCATTATGTCCACAGGCTCTaGCAAACAACATGTCATGTGCTCAAGGAGGTCTGTGAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: KPVNAFDSLHYVHRL*QTTCHVLKEVCERA
Trigger: TGCCCTCTCACAGACCTCCTTGAGCACATGACATGTTGTTTGCCAGAGCCTGTGGACATAATGAAGGCTGTCAAAGGCATTTACTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS-3UTR CAA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACACGTACGGTCCTTCTTaGGGATGCTCACGGACTCTT +
Preference number: 5 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYTYGPS*GCSRTL
Trigger: AAGAGTCCGTGAGCATCCCAAAGAAGGACCGTACGT...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTACAATCTCTGTTTCCTaGCGCCTGGTCTCTACCTCC +
Preference number: 5 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCTISVS*RLVSTS
Trigger: GGAGGTAGAGACCAGGCGCAAGGAAACAGAGATTGT...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTTTCCCTCTTTTCCTCTaGGGCCCGCTGGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGFPLFL*GPLGLS
Trigger: GGAGAGGCCCAGCGGGCCCAAGAGGAAAAGAGGGAA...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACTGTTGCCATCATCTGTaGCCAAGAAGCTCGGGTCAC +
Preference number: 5 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYCCHHL*PRSSGH
Trigger: GTGACCCGAGCTTCTTGGCAACAGATGATGGCAACA...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTTCACAAATGGTGTGCTaGGACAGGGTCAGTCCCACT +
Preference number: 5 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCSQMVC*DRVSPT
Trigger: AGTGGGACTGACCCTGTCCAAGCACACCATTTGTGA...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS GCA 90 bp AAGAGCCTCATCCTGAGAATTGAAAGTGAGTTTCCAGATGTCGAGTaGCTGATCCTGTCCATCCTCAAGACACAACGGAATAACCACCTG +
Preference number: 5 (lower is better)
Translates to: KSLILRIESEFPDVE*LILSILKTQRNNHL
Trigger: CAGGTGGTTATTCCGTTGTGTCTTGAGGATGGACAGGATCAGGCACTCGACATCTGGAAACTCACTTTCAATTCTCAGGATGAGGCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000211861.2
ENSMUST00000212106.2
CDS CCA 90 bp AAGGAGGTCTGTGAGAGGGCACTCTTGAAGCCTCAGCATTTGTTCTaGGAAAGGTACAAGAGTCTGCTTAAATGCAATGATCTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: KEVCERALLKPQHLF*ERYKSLLKCNDLPS
Trigger: GCTGGGAAGATCATTGCATTTAAGCAGACTCTTGTACCTTTCCCAGAACAAATGCTGAGGCTTCAAGAGTGCCCTCTCACAGACCTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS-3UTR CAA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGCATCTAGTGGTTTCATaGATCCGACTGAAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: AGILVQESTLHQSLFDEKHLVVS*IRLKRA
Trigger: AGCTCTCTTCAGTCGGATCAATGAAACCACTAGATG...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTGCTGCGGTGGTGCGATaGATATTTCCTGCGTCCATG +
Preference number: 5 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSAAVVR*IFPASM
Trigger: CATGGACGCAGGAAATATCAATCGCACCACCGCAGC...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCAGCTCACGGATGAGTTaGACGTTGGCATCCTCATTA +
Preference number: 5 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVSSRMS*TLASSL
Trigger: TAATGAGGATGCCAACGTCAAACTCATCCGTGAGCT...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTACCATTCACAGAGCATaGGGACCCTCTCAGGGGTAT +
Preference number: 5 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTTIHRA*GPSQGY
Trigger: ATACCCCTGAGAGGGTCCCAATGCTCTGTGAATGGT...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGAAGCAGGTCCTTGAGCTaGTTTTCAATGTGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LLLIGLAASSNILVSLERSRSLS*FSMWKL
Trigger: CAGCTTCCACATTGAAAACAAGCTCAAGGACCTGCT...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTGGCACTCTGGGCATTTaGCTCTTGGTGCAATCGGTC +
Preference number: 5 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSGTLGI*LLVQSV
Trigger: GACCGATTGCACCAAGAGCAAAATGCCCAGAGTGCC...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGACTACCCGCTCGTCTTaGTTTCCAAACAGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: AGILVQESTLHQSLFDEKTTRSS*FPNSFF
Trigger: AAAGAAGCTGTTTGGAAACAAAGACGAGCGGGTAGT...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS TCA 90 bp AATCTGGACTCTTGGTGTCAGCAGAATAAAAAGAGAAGTCATAGGTaGAGGTCTTGGTCCGTTCTCTGCCTGAATCCCCAGTTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: NLDSWCQQNKKRSHR*RSWSVLCLNPQFLL
Trigger: AAGGAGGAACTGGGGATTCAGGCAGAGAACGGACCAAGACCTTCACCTATGACTTCTCTTTTTATTCTGCTGACACCAAGAGTCCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS TCA 90 bp CTTCTCTGCCGACGTAAGTCTGACCCTCCTTCAAGTGATACAAGATaGTTCCAGTGCTCAGAAGATCATCATCAATGCCAATTAGGTGCG +
Preference number: 5 (lower is better)
Translates to: LLCRRKSDPPSSDTR*FQCSEDHHQCQLGA
Trigger: CGCACCTAATTGGCATTGATGATGATCTTCTGAGCACTGGAATCATCTTGTATCACTTGAAGGAGGGTCAGACTTACGTCGGCAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS TCA 90 bp ATCGGAGTATTTCTCATTTTGTTGCTCACAACTCAATGTAGGAGCTaGTACTCTCTGAGGAGAGCTGCCAGTGGGCTGTTCCCTTTGAGA +
Preference number: 5 (lower is better)
Translates to: IGVFLILLLTTQCRS*YSLRRAASGLFPLR
Trigger: TCTCAAAGGGAACAGCCCACTGGCAGCTCTCCTCAGAGAGTATCAGCTCCTACATTGAGTTGTGAGCAACAAAATGAGAAATACTCCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS TCA 90 bp AAACAACATGTCATGTGCTCAAGGAGGTCTGTGAGAGGGCACTCTTaGAGCCTCAGCATTTGTTCTGGGAAAGGTACAAGAGTCTGCTTA +
Preference number: 5 (lower is better)
Translates to: KQHVMCSRRSVRGHS*SLSICSGKGTRVCL
Trigger: TAAGCAGACTCTTGTACCTTTCCCAGAACAAATGCTGAGGCTTCAAGAGTGCCCTCTCACAGACCTCCTTGAGCACATGACATGTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS GCA 90 bp CACATTTTACATGCTCCAGAGCTACTTTCTCTTCTTGGACTTCTTTaGTTAGGAGGTCTTTCTGTTGGACCAGGTCCTTCTCCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: HILHAPELLSLLGLL*LGGLSVGPGPSPGL
Trigger: CAAGCCTGGAGAAGGACCTGGTCCAACAGAAAGACCTCCTAAGCAAAGAAGTCCAAGAAGAGAAAGTAGCTCTGGAGCATGTAAAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 90 bp ACTTCCAGCAAGATCGACGAGGTGGATCTTGCTCACAGTTTCACATaGCATTTCAGCGTCGAATTTTGCCTGAGTGAACTTGATGGTGAA +
Preference number: 5 (lower is better)
Translates to: TSSKIDEVDLAHSFT*HFSVEFCLSELDGE
Trigger: TTCACCATCAAGTTCACTCAGGCAAAATTCGACGCTGAAATGCCATGTGAAACTGTGAGCAAGATCCACCTCGTCGATCTTGCTGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 90 bp TGTGAAGTTCCTCATTACTCTTCATCACATCAGCAGGTGTATGGTTaGCATCACCAATTGCCCTGTGCAAATCATGAAGGCGTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: CEVPHYSSSHQQVYG*HHQLPCANHEGVSG
Trigger: TCCAGAGACGCCTTCATGATTTGCACAGGGCAATTGGTGATGCCAACCATACACCTGCTGATGTGATGAAGAGTAATGAGGAACTTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTACGTACGGTCCTTCTTaGGGATGCTCACGGACTCTT +
Preference number: 5 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSTYGPS*GCSRTL
Trigger: AAGAGTCCGTGAGCATCCCAAAGAAGGACCGTACGT...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGAAGGGACTTGTTTATATaGCCCCCTTCCTTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: PEVQAGARIISENSFVFRRDLFI*PPSLSL
Trigger: CAGACTCAAGGAAGGGGGCAATATAAACAAGTCCCT...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACAGAGTCACAAGGGACTaGTTTATATTGCCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYRVTRD*FILPPS
Trigger: GGAAGGGGGCAATATAAACAAGTCCCTTGTGACTCT...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTAGAGTCACAAGGGACTaGTTTATATTGCCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCRVTRD*FILPPS
Trigger: GGAAGGGGGCAATATAAACAAGTCCCTTGTGACTCT...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCCGGATGAGTTTGACGTaGGCATCCTCATTAATGGTA +
Preference number: 5 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVRMSLT*ASSLMV
Trigger: TACCATTAATGAGGATGCCAACGTCAAACTCATCCG...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGATGGGTTTCATTCCACTaGTTTGTCCATTCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: SNILVSLERSAVRACSRRWVSFH*FVHSLV
Trigger: GACCAAGGAATGGACAAACAAGTGGAATGAAACCCA...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTAGCAGGTCCTTGAGCTaGTTTTCAATGTGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCSRSLS*FSMWKL
Trigger: CAGCTTCCACATTGAAAACAAGCTCAAGGACCTGCT...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTTCCCTCTTTTCCTCTaGGGCCCGCTGGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLFPLFL*GPLGLS
Trigger: GGAGAGGCCCAGCGGGCCCAAGAGGAAAAGAGGGAA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTTGTTGCCATCATCTGTaGCCAAGAAGCTCGGGTCAC +
Preference number: 5 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSCCHHL*PRSSGH
Trigger: GTGACCCGAGCTTCTTGGCAACAGATGATGGCAACA...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTTCAGGTCGTCTCGATTaGTTCCCAAAGAGCGAGAAT +
Preference number: 5 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCSGRLD*FPKSEN
Trigger: ATTCTCGCTCTTTGGGAACAAATCGAGACGACCTGA...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACCATCTAGTGGTTTCATaGATCCGACTGAAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYHLVVS*IRLKRA
Trigger: AGCTCTCTTCAGTCGGATCAATGAAACCACTAGATG...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGGCTGCGGTGGTGCGATaGATATTTCCTGCGTCCATG +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMAAVVR*IFPASM
Trigger: CATGGACGCAGGAAATATCAATCGCACCACCGCAGC...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTAGCTCACGGATGAGTTaGACGTTGGCATCCTCATTA +
Preference number: 5 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTSSRMS*TLASSL
Trigger: TAATGAGGATGCCAACGTCAAACTCATCCGTGAGCT...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGATTCCTTGGTCAATTCTaGGACTCTTGCTTCATTCTG +
Preference number: 5 (lower is better)
Translates to: LLLIGLAASSNILVSLERFLGQF*DSCFIL
Trigger: CAGAATGAAGCAAGAGTCCAAGAATTGACCAAGGAA...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GACAGTGGCCACTTGGTATCCAGGATGCTTGAAAGCACAATGATGCATACATACCAATATCTTGCTCTGTaGAAGCATCTTCTCTGCCGA +
Preference number: 5 (lower is better)
Translates to: DSGHLVSRMLESTMMHTYQYLAL*KHLLCR
Trigger: TCGGCAGAGAAGATGCTTCAACAGAGCAAGATATTG...GTATGTATGCATCATTGTGCTTTCAAGCATCCTGGATACCAAGTGGCCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGGGCACTCTGGGCATTTaGCTCTTGGTGCAATCGGTC +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMGTLGI*LLVQSV
Trigger: GACCGATTGCACCAAGAGCAAAATGCCCAGAGTGCC...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTTCTCCAACCGCAGCTaGGCACTCTGGGCATTTTGC +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMFSNRS*ALWAFC
Trigger: GCAAAATGCCCAGAGTGCCAAGCTGCGGTTGGAGAA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTCCAGCTCTCATCTCTTaGGCCTGCAAAAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGPALIS*ACKRAS
Trigger: GGAAGCCCTTTTGCAGGCCAAAGAGATGAGAGCTGG...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CTCCTCCTTATAGGGCTAGCTGCATCTTCCAACATTCTTGTGAGCTTGGAGAGATCTTCTTGGACTTCTTaGCTTAGGAGGTCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: LLLIGLAASSNILVSLERSSWTS*LRRSFC
Trigger: ACAGAAAGACCTCCTAAGCAAAGAAGTCCAAGAAGA...TCTCTCCAAGCTCACAAGAATGTTGGAAGATGCAGCTAGCCCTATAAGGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS GCA 90 bp ATTACTCTTCATCACATCAGCAGGTGTATGGTTGGCATCACCAATTaGCCTGTGCAAATCATGAAGGCGTCTCTGGACTTCTTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: ITLHHISRCMVGITN*PVQIMKASLDFFFN
Trigger: ATTGAAGAAGAAGTCCAGAGACGCCTTCATGATTTGCACAGGGCAATTGGTGATGCCAACCATACACCTGCTGATGTGATGAAGAGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 90 bp AAGAGCGAGAATACATCCGCTCATACTTTAGCTTACGTTGAGTGGTaGCATTGTGAAGTTCCTCATTACTCTTCATCACATCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: KSENTSAHTLAYVEW*HCEVPHYSSSHQQV
Trigger: CACCTGCTGATGTGATGAAGAGTAATGAGGAACTTCACAATGGCACCACTCAACGTAAGCTAAAGTATGAGCGGATGTATTCTCGCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS CCA 90 bp CCAAAGAGCGAGAATACATCCGCTCATACTTTAGCTTACGTTGAGTaGTGCCATTGTGAAGTTCCTCATTACTCTTCATCACATCAGCAG +
Preference number: 5 (lower is better)
Translates to: PKSENTSAHTLAYVE*CHCEVPHYSSSHQQ
Trigger: CTGCTGATGTGATGAAGAGTAATGAGGAACTTCACAATGGCACCACTCAACGTAAGCTAAAGTATGAGCGGATGTATTCTCGCTCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp GCTGGAATCCTGGTGCAGGAGTCCACTCTGCATCAGAGTCTATTTGATGAGAAGTTAATGGTAGGCTTGTaGATGATGTTTTTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: AGILVQESTLHQSLFDEKLMVGL*MMFLAL
Trigger: TAGAGCCAAAAACATCATCAACAAGCCTACCATTAA...CTTCTCATCAAATAGACTCTGATGCAGAGTGGACTCCTGCACCAGGATTCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCTCTTCTCCCTAAGCTaGGCGGCTTCCTTCGGATGG +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLLFSLS*AASFGW
Trigger: CCATCCGAAGGAAGCCGCCAAGCTTAGGGAGAAGAG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCGCTCTAGTTCTGCCTaGTCCGACTTCTGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMRSSSA*SDFCFS
Trigger: GGAAAAGCAGAAGTCGGACAAGGCAGAACTAGAGCG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGACAATCTCTGTTTCCTaGCGCCTGGTCTCTACCTCC +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMTISVS*RLVSTS
Trigger: GGAGGTAGAGACCAGGCGCAAGGAAACAGAGATTGT...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTGGAAGCTGCGGCGTTaGAGGCTTTCCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLWKLRR*RLSSCL
Trigger: CAAGCAGGAGGAAAGCCTCAAACGCCGCAGCTTCCA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTTCCAGGCTTGCTAGCTaGACAAGCTGCCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGSRLAS*TSCLLL
Trigger: CAAGAGAAGGCAGCTTGTCAAGCTAGCAAGCCTGGA...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTTCTTCTTGGACTTCTTaGCTTAGGAGGTCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCSSWTS*LRRSFC
Trigger: ACAGAAAGACCTCCTAAGCAAAGAAGTCCAAGAAGA...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTGTTGCCATCATCTGTaGCCAAGAAGCTCGGGTCAC +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMCCHHL*PRSSGH
Trigger: GTGACCCGAGCTTCTTGGCAACAGATGATGGCAACA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTCTCCAATGCCTCTCTTaGCTGTTTCTCCTGGGACTC +
Preference number: 5 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGLQCLS*LFLLGL
Trigger: GAGTCCCAGGAGAAACAGCAAAGAGAGGCATTGGAG...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTAAGTTCTTCACGCTGTaGTCTCTCAAACTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCKFFTL*SLKLKS
Trigger: AGACTTGAGTTTGAGAGACAACAGCGTGAAGAACTT...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230763.2
CDS GCA 90 bp ACTAAATGCTTGGATAAATCCTCAACGTACGGTCCTTCTTTGGGATaGTCACGGACTCTTAAATTGAAGGTCTTAGATGACTTCCGCCTA +
Preference number: 5 (lower is better)
Translates to: TKCLDKSSTYGPSLG*SRTLKLKVLDDFRL
Trigger: TAGGCGGAAGTCATCTAAGACCTTCAATTTAAGAGTCCGTGAGCATCCCAAAGAAGGACCGTACGTTGAGGATTTATCCAAGCATTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTTTTGCTTTTCTCCATTaGAATGATGAACTTGGCCTC +
Preference number: 5 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCFAFLH*NDELGL
Trigger: GAGGCCAAGTTCATCATTCAAATGGAGAAAAGCAAA...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TTGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTTCACGGACTCTTAAATaGAAGGTCTTAGATGACTTC +
Preference number: 5 (lower is better)
Translates to: LLYYGKGHVQVQRYSNNCSRTLK*KVLDDF
Trigger: GAAGTCATCTAAGACCTTCAATTTAAGAGTCCGTGA...ACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGATCACGGACTCTTAAATaGAAGGTCTTAGATGACTTC +
Preference number: 5 (lower is better)
Translates to: PEVQAGARIISENSFVFRSRTLK*KVLDDF
Trigger: GAAGTCATCTAAGACCTTCAATTTAAGAGTCCGTGA...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TCCAACATTCTTGTGAGCTTGGAGAGATCTGCTGTGCGGGCATGTTCTAGAAGATTAATGGTAGGCTTGTaGATGATGTTTTTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: SNILVSLERSAVRACSRRLMVGL*MMFLAL
Trigger: TAGAGCCAAAAACATCATCAACAAGCCTACCATTAA...TCTTCTAGAACATGCCCGCACAGCAGATCTCTCCAAGCTCACAAGAATGTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CCAGAGGTCCAAGCGGGAGCTAGAATCATCTCAGAGAATAGCTTTGTTTTCAGATCAATTCTTGGACTCTaGCTTCATTCTGGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: PEVQAGARIISENSFVFRSILGL*LHSGEV
Trigger: AACTTCACCAGAATGAAGCAAGAGTCCAAGAATTGA...TCTGAAAACAAAGCTATTCTCTGAGATGATTCTAGCTCCCGCTTGGACCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp TGCTGTACTATGGGAAAGGCCACGTTCAAGTGCAGAGGTACAGTAACAACTGTCTTTCATTCCACTTGTTaGTCCATTCCTTGGTCAATT +
Preference number: 5 (lower is better)
Translates to: CCTMGKATFKCRGTVTTVFHSTC*SIPWSI
Trigger: AATTGACCAAGGAATGGACAAACAAGTGGAATGAAA...GACAGTTGTTACTGTACCTCTGCACTTGAACGTGGCCTTTCCCATAGTACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCCAGCTCTCATCTCTTaGGCCTGCAAAAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLPALIS*ACKRAS
Trigger: GGAAGCCCTTTTGCAGGCCAAAGAGATGAGAGCTGG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTACAAGCTGCCTTCTCTaGAACTCTAAGAAGTACTGC +
Preference number: 5 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSTSCLL*NSKKYC
Trigger: GCAGTACTTCTTAGAGTTCAAGAGAAGGCAGCTTGT...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CAAGTTTCTGCAATGTTGCCTACATCCAATTTGTCAGGCATGGAAGACTCTTCTACTACCCGCTCGTCTTaGTTTCCAAACAGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: QVSAMLPTSNLSGMEDSSTTRSS*FPNSFF
Trigger: AAAGAAGCTGTTTGGAAACAAAGACGAGCGGGTAGT...AGAAGAGTCTTCCATGCCTGACAAATTGGATGTAGGCAACATTGCAGAAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTTCTGTACCCAGAGTTTaGAAAACCATTTCTTGTGAG +
Preference number: 5 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTSVPRV*KTISCE
Trigger: CTCACAAGAAATGGTTTTCAAAACTCTGGGTACAGA...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTACGTACGGTCCTTCTTaGGGATGCTCACGGACTCTT +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLTYGPS*GCSRTL
Trigger: AAGAGTCCGTGAGCATCCCAAAGAAGGACCGTACGT...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp CCGTTTTGTCAGCTCAGACCTATCATCTCTCCTATTGTTAGCTCAAGAGGAACTTTCTGGACTAAATGCTaGGATAAATCCTCAACGTAC +
Preference number: 5 (lower is better)
Translates to: PFCQLRPIISPIVSSRGTFWTKC*DKSSTY
Trigger: GTACGTTGAGGATTTATCCAAGCATTTAGTCCAGAA...AGTTCCTCTTGAGCTAACAATAGGAGAGATGATAGGTCTGAGCTGACAAAACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGAGGGACTTGTTTATATaGCCCCCTTCCTTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMRDLFI*PPSLSL
Trigger: CAGACTCAAGGAAGGGGGCAATATAAACAAGTCCCT...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGAGAGTCACAAGGGACTaGTTTATATTGCCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMRVTRD*FILPPS
Trigger: GGAAGGGGGCAATATAAACAAGTCCCTTGTGACTCT...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGAGCTCACGGATGAGTTaGACGTTGGCATCCTCATTA +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMSSRMS*TLASSL
Trigger: TAATGAGGATGCCAACGTCAAACTCATCCGTGAGCT...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTACCATTCACAGAGCATaGGGACCCTCTCAGGGGTAT +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLTIHRA*GPSQGY
Trigger: ATACCCCTGAGAGGGTCCCAATGCTCTGTGAATGGT...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGAGCAGGTCCTTGAGCTaGTTTTCAATGTGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMSRSLS*FSMWKL
Trigger: CAGCTTCCACATTGAAAACAAGCTCAAGGACCTGCT...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTCCAGGCTTGCTAGCTaGACAAGCTGCCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLSRLAS*TSCLLL
Trigger: CAAGAGAAGGCAGCTTGTCAAGCTAGCAAGCCTGGA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCTCCAATGCCTCTCTTaGCTGTTTCTCCTGGGACTC +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLLQCLS*LFLLGL
Trigger: GAGTCCCAGGAGAAACAGCAAAGAGAGGCATTGGAG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS GCA 90 bp TTCCATGAAGAAAGTAGACCATGTCTACCAAGGTTGTCTGGAAATTaGAAGACAACTGAACTCCATTCGCCAAAGCTAAAACAGGGATTT +
Preference number: 5 (lower is better)
Translates to: FHEESRPCLPRLSGN*KTTELHSPKLKQGF
Trigger: AAATCCCTGTTTTAGCTTTGGCGAATGGAGTTCAGTTGTCTTGCAATTTCCAGACAACCTTGGTAGACATGGTCTACTTTCTTCATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000211861.2
ENSMUST00000212106.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCATCTAGTGGTTTCATaGATCCGACTGAAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMHLVVS*IRLKRA
Trigger: AGCTCTCTTCAGTCGGATCAATGAAACCACTAGATG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTAAGTTCTTCACGCTGTaGTCTCTCAAACTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGKFFTL*SLKLKS
Trigger: GGACTTGAGTTTGAGAGACAACAGCGTGAAGAACTT...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043589.8
CDS-3UTR CAA 90 bp AAAAATGAACAACAGCCTTTGAGGTTTGGGAAAATGCCCTCAAATAGTGAAGGTACAAGCTGCCTTCTCTaGAACTCTAAGAAGTACTGC +
Preference number: 5 (lower is better)
Translates to: KNEQQPLRFGKMPSNSEGTSCLL*NSKKYC
Trigger: GCAGTACTTCTTAGAGTTCAAGAGAAGGCAGCTTGT...ACCTTCACTATTTGAGGGCATTTTCCCAAACCTCAAAGGCTGTTGTTCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGCCATGTCTACCAAGGTaGTCTGGAAATTGCAAGACA +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMPCLPR*SGNCKT
Trigger: TGTCTTGCAATTTCCAGACAACCTTGGTAGACATGG...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTTCCTTGGTCAATTCTaGGACTCTTGCTTCATTCTG +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMFLGQF*DSCFIL
Trigger: CAGAATGAAGCAAGAGTCCAAGAATTGACCAAGGAA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS TCA 90 bp TTAGCTTCAATGTTTTATGCATTTCTCGAAAACGACTGTAGCGCCTaGATACAGTCCATGTCTCATCTAGGACAGAAATCTTCACTTCAA +
Preference number: 5 (lower is better)
Translates to: LASMFYAFLENDCSA*IQSMSHLGQKSSLQ
Trigger: TTGAAGTGAAGATTTCTGTCCTAGATGAGACATGGACTGTATTCAGGCGCTACAGTCGTTTTCGAGAAATGCATAAAACATTGAAGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTCTGTACCCAGAGTTTaGAAAACCATTTCTTGTGAG +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMSVPRV*KTISCE
Trigger: CTCACAAGAAATGGTTTTCAAAACTCTGGGTACAGA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTCACGGACTCTTAAATaGAAGGTCTTAGATGACTTC +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMSRTLK*KVLDDF
Trigger: GAAGTCATCTAAGACCTTCAATTTAAGAGTCCGTGA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTTCTGGACTAAATGCTaGGATAAATCCTCAACGTAC +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMFWTKC*DKSSTY
Trigger: GTACGTTGAGGATTTATCCAAGCATTTAGTCCAGAA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCGGATGAGTTTGACGTaGGCATCCTCATTAATGGTA +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLRMSLT*ASSLMV
Trigger: TACCATTAATGAGGATGCCAACGTCAAACTCATCCG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTGGGTTTCATTCCACTaGTTTGTCCATTCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLWVSFH*FVHSLV
Trigger: GACCAAGGAATGGACAAACAAGTGGAATGAAACCCA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTCAATATCTTGCTCTGTaGAAGCATCTTCTCTGCCGA +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLQYLAL*KHLLCR
Trigger: TCGGCAGAGAAGATGCTTCAACAGAGCAAGATATTG...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTAAGTTCTTCACGCTGTaGTCTCTCAAACTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLKFFTL*SLKLKS
Trigger: GGACTTGAGTTTGAGAGACAACAGCGTGAAGAACTT...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTACAAGCTGCCTTCTCTaGAACTCTAAGAAGTACTGC +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLTSCLL*NSKKYC
Trigger: GCAGTACTTCTTAGAGTTCAAGAGAAGGCAGCTTGT...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp ATGGCACCAGTAATTGAGCAGATCCAAATTTACAATCTGAGCTTTGAGACAATGTTAATGGTAGGCTTGTaGATGATGTTTTTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: MAPVIEQIQIYNLSFETMLMVGL*MMFLAL
Trigger: TAGAGCCAAAAACATCATCAACAAGCCTACCATTAA...CATTGTCTCAAAGCTCAGATTGTAAATTTGGATCTGCTCAATTACTGGTGCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTTAAAGCGGAACATGTaGGTTCTTCCCAAGAGTATC +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLLKRNM*VLPKSI
Trigger: GATACTCTTGGGAAGAACCAACATGTTCCGCTTTAA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTCTTCTTGGACTTCTTaGCTTAGGAGGTCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLSSWTS*LRRSFC
Trigger: ACAGAAAGACCTCCTAAGCAAAGAAGTCCAAGAAGA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTTTGCTTTTCTCCATTaGAATGATGAACTTGGCCTC +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLFAFLH*NDELGL
Trigger: GAGGCCAAGTTCATCATTCAAATGGAGAAAAGCAAA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTCAATTCTTGGACTCTaGCTTCATTCTGGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLSILGL*LHSGEV
Trigger: AACTTCACCAGAATGAAGCAAGAGTCCAAGAATTGA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS-3UTR CAA 90 bp AGAGTTCTGCTTTTTCCCATTCAATCAAGTACACTGAGACATTCATATTTCCTTTTTCATTCCACTTGTTaGTCCATTCCTTGGTCAATT +
Preference number: 5 (lower is better)
Translates to: RVLLFPIQSSTLRHSYFLFHSTC*SIPWSI
Trigger: AATTGACCAAGGAATGGACAAACAAGTGGAATGAAA...AAGGAAATATGAATGTCTCAGTGTACTTGATTGAATGGGAAAAAGCAGAACTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS GCA 72 bp CACAGCAGAGGAGCAGTGTCCTGCCTCTTCCGAAGCTaGTCCTCCAGGTGTGCCACCCGCTGCACCTGCTCC +
Preference number: 6 (lower is better)
Translates to: HSRGAVSCLFRS*SSRCATRCTCS
Trigger: GGAGCAGGTGCAGCGGGTGGCACACCTGGAGGAGCAGCTTCGGAAGAGGCAGGACACTGCTCCTCTGCTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp TCCAGGGTGGAGCACCGCTGCAGGGCAGAGCGCCTCTaGTCTAGCTTAGCCACAGCCTGCTCCAATGCCTCT +
Preference number: 6 (lower is better)
Translates to: SRVEHRCRAERL*SSLATACSNAS
Trigger: AGAGGCATTGGAGCAGGCTGTGGCTAAGCTAGAGCAGAGGCGCTCTGCCCTGCAGCGGTGCTCCACCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp TGCTCCTGGATCTCCAGGTCCAGGGTGGAGCACCGCTaGAGGGCAGAGCGCCTCTGCTCTAGCTTAGCCACA +
Preference number: 6 (lower is better)
Translates to: CSWISRSRVEHR*RAERLCSSLAT
Trigger: TGTGGCTAAGCTAGAGCAGAGGCGCTCTGCCCTGCAGCGGTGCTCCACCCTGGACCTGGAGATCCAGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp GCTTCCCGGATGCTTTCCAGTTCCCTCTTTTCCTCTTaGGCCCGCTGGGCCTCTCCAGGACACAGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: ASRMLSSSLFSS*ARWASPGHSRG
Trigger: TCCTCTGCTGTGTCCTGGAGAGGCCCAGCGGGCCCAAGAGGAAAAGAGGGAACTGGAAAGCATCCGGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp CTGATGCGGAATAAGCTCTCTTCCTCCTGCCTCCTCTaGTGCTCGAGTCCCTGCTGCTCCCGAAGCCTCTCT +
Preference number: 6 (lower is better)
Translates to: LMRNKLSSSCLL*CSSPCCSRSLS
Trigger: AGAGAGGCTTCGGGAGCAGCAGGGACTCGAGCAGCAGAGGAGGCAGGAGGAAGAGAGCTTATTCCGCATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 90 bp CTGTCTGGCCACGTTAGCTGTGAACTCGAAGGTGGCCCGGAGCTGTaGCAGCTGGCTAGCATTAGCCTGGTACTGTGCGATCTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: LSGHVSCELEGGPEL*QLASISLVLCDLLF
Trigger: GAAGAGCAGATCGCACAGTACCAGGCTAATGCTAGCCAGCTGCAACAGCTCCGGGCCACCTTCGAGTTCACAGCTAACGTGGCCAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp AGCTCTTCTCTGATGCGGAATAAGCTCTCTTCCTCCTaGCTCCTCTGCTGCTCGAGTCCCTGCTGCTCCCGA +
Preference number: 6 (lower is better)
Translates to: SSSLMRNKLSSS*LLCCSSPCCSR
Trigger: TCGGGAGCAGCAGGGACTCGAGCAGCAGAGGAGGCAGGAGGAAGAGAGCTTATTCCGCATCAGAGAAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp AGGGCAGAGCGCCTCTGCTCTAGCTTAGCCACAGCCTaGTCCAATGCCTCTCTTTGCTGTTTCTCCTGGGAC +
Preference number: 6 (lower is better)
Translates to: RAERLCSSLATA*SNASLCCFSWD
Trigger: GTCCCAGGAGAAACAGCAAAGAGAGGCATTGGAGCAGGCTGTGGCTAAGCTAGAGCAGAGGCGCTCTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp GGACCTGATGGCACCATGAGTGACCTCAAGGGCAGGTaGTGGGGTAAGTGCTCCAATAATGGCAGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: GPDGTMSDLKGR*WGKCSNNGRPL
Trigger: CAGAGGCCTGCCATTATTGGAGCACTTACCCCAGCACCTGCCCTTGAGGTCACTCATGGTGCCATCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CCA 72 bp GCTGTGAACTCGAAGGTGGCCCGGAGCTGTTGCAGCTaGCTAGCATTAGCCTGGTACTGTGCGATCTGCTCT +
Preference number: 6 (lower is better)
Translates to: AVNSKVARSCCS*LALAWYCAICS
Trigger: AGAGCAGATCGCACAGTACCAGGCTAATGCTAGCCAGCTGCAACAGCTCCGGGCCACCTTCGAGTTCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp TCCAGACTGGCCTGCCACCCTGACCATTCACTGGTGTaGAGAGAGCCAAGTTTCTGCCTCTGCTCCTGGATC +
Preference number: 6 (lower is better)
Translates to: SRLACHPDHSLV*REPSFCLCSWI
Trigger: GATCCAGGAGCAGAGGCAGAAACTTGGCTCTCTCCACACCAGTGAATGGTCAGGGTGGCAGGCCAGTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp CAGTCTCCAGACTGGCCTGCCACCCTGACCATTCACTaGTGTGGAGAGAGCCAAGTTTCTGCCTCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: QSPDWPATLTIH*CGESQVSASAP
Trigger: AGGAGCAGAGGCAGAAACTTGGCTCTCTCCACACCAGTGAATGGTCAGGGTGGCAGGCCAGTCTGGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS TCA 72 bp GAGTTTCAGGAAGAGGAGGAGGACCTGATGGCACCATaGGTGACCTCAAGGGCAGGTGCTGGGGTAAGTGCT +
Preference number: 6 (lower is better)
Translates to: EFQEEEEDLMAP*VTSRAGAGVSA
Trigger: AGCACTTACCCCAGCACCTGCCCTTGAGGTCACTCATGGTGCCATCAGGTCCTCCTCCTCTTCCTGAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS TCA 72 bp GCCCACCAAAGCCGACCTGAATCTCCTGCAGTGCAGTaGGAGGGAGAGCATGAAAAGTGCTCATGGAGCCTG +
Preference number: 6 (lower is better)
Translates to: AHQSRPESPAVQ*EGEHEKCSWSL
Trigger: CAGGCTCCATGAGCACTTTTCATGCTCTCCCTCTCACTGCACTGCAGGAGATTCAGGTCGGCTTTGGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS GCA 72 bp CAGGTATGGTCCCCTCCAGCTCTCATCTCTTTGGCCTaGAAAAGGGCTTCCCGGATGCTTTCCAGTTCCCTC +
Preference number: 6 (lower is better)
Translates to: QVWSPPALISLA*KRASRMLSSSL
Trigger: GAGGGAACTGGAAAGCATCCGGGAAGCCCTTTTGCAGGCCAAAGAGATGAGAGCTGGAGGGGACCATACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp ACGTTAGCTGTGAACTCGAAGGTGGCCCGGAGCTGTTaGAGCTGGCTAGCATTAGCCTGGTACTGTGCGATC +
Preference number: 6 (lower is better)
Translates to: TLAVNSKVARSC*SWLALAWYCAI
Trigger: GATCGCACAGTACCAGGCTAATGCTAGCCAGCTGCAACAGCTCCGGGCCACCTTCGAGTTCACAGCTAACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp GGTCCATCTCAAGTGCTTCTCCATCAGTCTCCAGACTaGCCTGCCACCCTGACCATTCACTGGTGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: GPSQVLLHQSPD*PATLTIHWCGE
Trigger: CTCTCCACACCAGTGAATGGTCAGGGTGGCAGGCCAGTCTGGAGACTGATGGAGAAGCACTTGAGATGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp CCTGATGGCACCATGAGTGACCTCAAGGGCAGGTGCTaGGGTAAGTGCTCCAATAATGGCAGGCCTCTGATG +
Preference number: 6 (lower is better)
Translates to: PDGTMSDLKGRC*GKCSNNGRPLM
Trigger: CATCAGAGGCCTGCCATTATTGGAGCACTTACCCCAGCACCTGCCCTTGAGGTCACTCATGGTGCCATCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CAA 72 bp CACGTTAGCTGTGAACTCGAAGGTGGCCCGGAGCTGTaGCAGCTGGCTAGCATTAGCCTGGTACTGTGCGAT +
Preference number: 6 (lower is better)
Translates to: HVSCELEGGPEL*QLASISLVLCD
Trigger: ATCGCACAGTACCAGGCTAATGCTAGCCAGCTGCAACAGCTCCGGGCCACCTTCGAGTTCACAGCTAACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS TCA 72 bp GAAGGCCAAGTTCCTGTGAGGTGCTGTGCTCTTGGCTaGCCTTGGGCTTCCTCCACCTTCACTGTTGAAGCT +
Preference number: 6 (lower is better)
Translates to: EGQVPVRCCALG*PWASSTFTVEA
Trigger: AGCTTCAACAGTGAAGGTGGAGGAAGCCCAAGGTCAGCCAAGAGCACAGCACCTCACAGGAACTTGGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS TCA 72 bp TGGGCAACCATCTACCAGTACCAGAGCATACAGAATTaGAGGCAGCAGGAGCAAGCATGCAGCCTGGGGGTC +
Preference number: 6 (lower is better)
Translates to: WATIYQYQSIQN*RQQEQACSLGV
Trigger: GACCCCCAGGCTGCATGCTTGCTCCTGCTGCCTTCAATTCTGTATGCTCTGGTACTGGTAGATGGTTGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS GCA 72 bp GTGGGACCTGCTACTGACATCATTCATCCCCGTCGCTaGGGTGGTGCGATTGATATTTCCTGCGTCCATGAG +
Preference number: 6 (lower is better)
Translates to: VGPATDIIHPRR*GGAIDISCVHE
Trigger: CTCATGGACGCAGGAAATATCAATCGCACCACCGCAGCGACGGGGATGAATGATGTCAGTAGCAGGTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp CCAGTGCTCAGAAGATCATCATCAATGCCAATTAGGTaGGGCAGCTCCGAGTCCAGCACCACACCAATGCCC +
Preference number: 6 (lower is better)
Translates to: PVLRRSSSMPIR*GSSESSTTPMP
Trigger: GGGCATTGGTGTGGTGCTGGACTCGGAGCTGCCGCACCTAATTGGCATTGATGATGATCTTCTGAGCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp CGTTTGAGGCTTTCCTCCTGCTTGCGGATTTGCCGCTaGACAATCTCTGTTTCCTTGCGCCTGGTCTCTACC +
Preference number: 6 (lower is better)
Translates to: RLRLSSCLRICR*TISVSLRLVST
Trigger: GGTAGAGACCAGGCGCAAGGAAACAGAGATTGTGCAGCGGCAAATCCGCAAGCAGGAGGAAAGCCTCAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp ATCTGGAGGCCCACCGAGAATGTTGCCATCATCTGTTaGCAAGAAGCTCGGGTCACCCCCTGCGTCACATTT +
Preference number: 6 (lower is better)
Translates to: IWRPTENVAIIC*QEARVTPCVTF
Trigger: AAATGTGACGCAGGGGGTGACCCGAGCTTCTTGGCAACAGATGATGGCAACATTCTCGGTGGGCCTCCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp ATCTCAAGTGCTTCTCCATCAGTCTCCAGACTGGCCTaGCACCCTGACCATTCACTGGTGTGGAGAGAGCCA +
Preference number: 6 (lower is better)
Translates to: ISSASPSVSRLA*HPDHSLVWREP
Trigger: TGGCTCTCTCCACACCAGTGAATGGTCAGGGTGGCAGGCCAGTCTGGAGACTGATGGAGAAGCACTTGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp TCCAACCGCAGCTTGGCACTCTGGGCATTTTGCTCTTaGTGCAATCGGTCCAGCTCCTGGAATATCTGGACC +
Preference number: 6 (lower is better)
Translates to: SNRSLALWAFCS*CNRSSSWNIWT
Trigger: GGTCCAGATATTCCAGGAGCTGGACCGATTGCACCAAGAGCAAAATGCCCAGAGTGCCAAGCTGCGGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp GACACTGGGAGAGTCAGCAGCATCTTTGGACAGAAGTaGGATAACACACGGTGCAGACCAAGGCTGCCCTGT +
Preference number: 6 (lower is better)
Translates to: DTGRVSSIFGQK*DNTRCRPRLPC
Trigger: ACAGGGCAGCCTTGGTCTGCACCGTGTGTTATCCCACTTCTGTCCAAAGATGCTGCTGACTCTCCCAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CAA 72 bp TCCCTACAGGTATGGTCCCCTCCAGCTCTCATCTCTTaGGCCTGCAAAAGGGCTTCCCGGATGCTTTCCAGT +
Preference number: 6 (lower is better)
Translates to: SLQVWSPPALIS*ACKRASRMLSS
Trigger: ACTGGAAAGCATCCGGGAAGCCCTTTTGCAGGCCAAAGAGATGAGAGCTGGAGGGGACCATACCTGTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 72 bp CTGGGCAACCATCTACCAGTACCAGAGCATACAGAATaGAAGGCAGCAGGAGCAAGCATGCAGCCTGGGGGT +
Preference number: 6 (lower is better)
Translates to: LGNHLPVPEHTE*KAAGASMQPGG
Trigger: ACCCCCAGGCTGCATGCTTGCTCCTGCTGCCTTCAATTCTGTATGCTCTGGTACTGGTAGATGGTTGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CAA 90 bp GCCAGCAGGTCCTTGAGCTTGTTTTCAATGTGGAAGCTGCGGCGTTaGAGGCTTTCCTCCTGCTTGCGGATTTGCCGCTGCACAATCTCT +
Preference number: 6 (lower is better)
Translates to: ASRSLSLFSMWKLRR*RLSSCLRICRCTIS
Trigger: AGAGATTGTGCAGCGGCAAATCCGCAAGCAGGAGGAAAGCCTCAAACGCCGCAGCTTCCACATTGAAAACAAGCTCAAGGACCTGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS TCA 72 bp GTGTGCTTGGACAGGGTCAGTCCCACTTTGTTGATGTaGAGGGGAGATGTCTCGGACTGGAGCATCACACTG +
Preference number: 6 (lower is better)
Translates to: VCLDRVSPTLLM*RGDVSDWSITL
Trigger: CAGTGTGATGCTCCAGTCCGAGACATCTCCCCTTCACATCAACAAAGTGGGACTGACCCTGTCCAAGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS TCA 72 bp CCTCCCTCAGGAGTGCCATGTGGGTGTTTAAAAGGATaGATGATAGGCAGGGGGCACAAGCAGCCTCACTCT +
Preference number: 6 (lower is better)
Translates to: PPSGVPCGCLKG*MIGRGHKQPHS
Trigger: AGAGTGAGGCTGCTTGTGCCCCCTGCCTATCATTCATCCTTTTAAACACCCACATGGCACTCCTGAGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000211861.2
ENSMUST00000212106.2
CDS GCA 72 bp CATCCCCGTCGCTGCGGTGGTGCGATTGATATTTCCTaGGTCCATGAGTTCCTCCACATCACTGTAGTTCTG +
Preference number: 6 (lower is better)
Translates to: HPRRCGGAIDIS*VHEFLHITVVL
Trigger: CAGAACTACAGTGATGTGGAGGAACTCATGGACGCAGGAAATATCAATCGCACCACCGCAGCGACGGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp ATCTCTGTTTCCTTGCGCCTGGTCTCTACCTCCTGCTaGATTCGCTCTAGTTCTGCCTTGTCCGACTTCTGC +
Preference number: 6 (lower is better)
Translates to: ISVSLRLVSTSC*IRSSSALSDFC
Trigger: GCAGAAGTCGGACAAGGCAGAACTAGAGCGAATGCAGCAGGAGGTAGAGACCAGGCGCAAGGAAACAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp TCAATGTGGAAGCTGCGGCGTTTGAGGCTTTCCTCCTaGTTGCGGATTTGCCGCTGCACAATCTCTGTTTCC +
Preference number: 6 (lower is better)
Translates to: SMWKLRRLRLSS*LRICRCTISVS
Trigger: GGAAACAGAGATTGTGCAGCGGCAAATCCGCAAGCAGGAGGAAAGCCTCAAACGCCGCAGCTTCCACATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp ACCATGAGTGACCTCAAGGGCAGGTGCTGGGGTAAGTaGTCCAATAATGGCAGGCCTCTGATGAAGGTTGTC +
Preference number: 6 (lower is better)
Translates to: TMSDLKGRCWGK*SNNGRPLMKVV
Trigger: GACAACCTTCATCAGAGGCCTGCCATTATTGGAGCACTTACCCCAGCACCTGCCCTTGAGGTCACTCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CCA 72 bp GCATCTGCCCGCTCACTTCCAGCAAGATCGACGAGGTaGATCTTGCTCACAGTTTCACATGGCATTTCAGCG +
Preference number: 6 (lower is better)
Translates to: ASARSLPARSTR*ILLTVSHGISA
Trigger: CGCTGAAATGCCATGTGAAACTGTGAGCAAGATCCACCTCGTCGATCTTGCTGGAAGTGAGCGGGCAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp AGAACAAAGCGCAGCACCCTGCTTTGCATAGCTTGCTaGCTTCCTCTGTTTGCTGGCACTTGCTGTGACACG +
Preference number: 6 (lower is better)
Translates to: RTKRSTLLCIAC*LPLFAGTCCDT
Trigger: CGTGTCACAGCAAGTGCCAGCAAACAGAGGAAGCCAGCAAGCTATGCAAAGCAGGGTGCTGCGCTTTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CAA 72 bp ATGTGGAAGCTGCGGCGTTTGAGGCTTTCCTCCTGCTaGCGGATTTGCCGCTGCACAATCTCTGTTTCCTTG +
Preference number: 6 (lower is better)
Translates to: MWKLRRLRLSSC*RICRCTISVSL
Trigger: CAAGGAAACAGAGATTGTGCAGCGGCAAATCCGCAAGCAGGAGGAAAGCCTCAAACGCCGCAGCTTCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS TCA 72 bp TTTGGTGCATCTGTAGATGTGAAGGCCAAGTTCCTGTaGGGTGCTGTGCTCTTGGCTGACCTTGGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: FGASVDVKAKFL*GAVLLADLGLP
Trigger: AGGAAGCCCAAGGTCAGCCAAGAGCACAGCACCTCACAGGAACTTGGCCTTCACATCTACAGATGCACCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS GCA 72 bp GGAATAACCACCTGGGTGCTTGAGGTAACTCGACTCTaGTCAGGTAGACCACTTCCTCTGTTCAAGGGAAGC +
Preference number: 6 (lower is better)
Translates to: GITTWVLEVTRL*SGRPLPLFKGS
Trigger: GCTTCCCTTGAACAGAGGAAGTGGTCTACCTGAGCAGAGTCGAGTTACCTCAAGCACCCAGGTGGTTATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000211861.2
ENSMUST00000212106.2
CDS GCA 72 bp TGCATAGCTTGCTGGCTTCCTCTGTTTGCTGGCACTTaGTGTGACACGTGTTGCAACAATGTCCAGCTGGAC +
Preference number: 6 (lower is better)
Translates to: CIACWLPLFAGT*CDTCCNNVQLD
Trigger: GTCCAGCTGGACATTGTTGCAACACGTGTCACAGCAAGTGCCAGCAAACAGAGGAAGCCAGCAAGCTATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS GCA 72 bp AGGCTTTCAGAGAGAACAAAGCGCAGCACCCTGCTTTaGATAGCTTGCTGGCTTCCTCTGTTTGCTGGCACT +
Preference number: 6 (lower is better)
Translates to: RLSERTKRSTLL*IACWLPLFAGT
Trigger: AGTGCCAGCAAACAGAGGAAGCCAGCAAGCTATGCAAAGCAGGGTGCTGCGCTTTGTTCTCTCTGAAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CCA 72 bp TTCTCAGCCAGCAGGTCCTTGAGCTTGTTTTCAATGTaGAAGCTGCGGCGTTTGAGGCTTTCCTCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: FSASRSLSLFSM*KLRRLRLSSCL
Trigger: CAAGCAGGAGGAAAGCCTCAAACGCCGCAGCTTCCACATTGAAAACAAGCTCAAGGACCTGCTGGCTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp TTCTTCAATGTAAGCACTGATCCTGGCATCCATCAGTaGAGCCAGGTGAGAGTTTCCCCCACTGGGTGGCAA +
Preference number: 6 (lower is better)
Translates to: FFNVSTDPGIHQ*SQVRVSPTGWQ
Trigger: TTGCCACCCAGTGGGGGAAACTCTCACCTGGCTCCACTGATGGATGCCAGGATCAGTGCTTACATTGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 72 bp CTGACATCATTCATCCCCGTCGCTGCGGTGGTGCGATaGATATTTCCTGCGTCCATGAGTTCCTCCACATCA +
Preference number: 6 (lower is better)
Translates to: LTSFIPVAAVVR*IFPASMSSSTS
Trigger: TGATGTGGAGGAACTCATGGACGCAGGAAATATCAATCGCACCACCGCAGCGACGGGGATGAATGATGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 72 bp GCCCGCTCACTTCCAGCAAGATCGACGAGGTGGATCTaGCTCACAGTTTCACATGGCATTTCAGCGTCGAAT +
Preference number: 6 (lower is better)
Translates to: ARSLPARSTRWI*LTVSHGISASN
Trigger: ATTCGACGCTGAAATGCCATGTGAAACTGTGAGCAAGATCCACCTCGTCGATCTTGCTGGAAGTGAGCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 72 bp TACTCTCTGAGGAGAGCTGCCAGTGGGCTGTTCCCTTaGAGAAAGGCTTTCAGAGAGAACAAAGCGCAGCAC +
Preference number: 6 (lower is better)
Translates to: YSLRRAASGLFP*RKAFRENKAQH
Trigger: GTGCTGCGCTTTGTTCTCTCTGAAAGCCTTTCTCAAAGGGAACAGCCCACTGGCAGCTCTCCTCAGAGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CAA 90 bp CTCTCTTCCTCAAACCTTTCCTTCTCAGCCAGCAGGTCCTTGAGCTaGTTTTCAATGTGGAAGCTGCGGCGTTTGAGGCTTTCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: LSSSNLSFSASRSLS*FSMWKLRRLRLSSC
Trigger: GCAGGAGGAAAGCCTCAAACGCCGCAGCTTCCACATTGAAAACAAGCTCAAGGACCTGCTGGCTGAGAAGGAAAGGTTTGAGGAAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 90 bp ATCTCACTCTCTTCTCTAAGGACACTGGGAGAGTCAGCAGCATCTTaGGACAGAAGTGGGATAACACACGGTGCAGACCAAGGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: ISLSSLRTLGESAAS*DRSGITHGADQGCP
Trigger: AGGGCAGCCTTGGTCTGCACCGTGTGTTATCCCACTTCTGTCCAAAGATGCTGCTGACTCTCCCAGTGTCCTTAGAGAAGAGAGTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CAA 90 bp ATCTGGACCTTCTCAGCTTGTTCGTGGCTGTTGAGCTCTTGGAGTTaGCGAAGCTCTTCTCTGATGCGGAATAAGCTCTCTTCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: IWTFSACSWLLSSWS*RSSSLMRNKLSSSC
Trigger: GCAGGAGGAAGAGAGCTTATTCCGCATCAGAGAAGAGCTTCGCAAACTCCAAGAGCTCAACAGCCACGAACAAGCTGAGAAGGTCCAGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS TCA 72 bp GCTCCGAGTCCAGCACCACACCAATGCCCTCTTTCCTaGGGGCTAGAGTTTGCTCTTTCAAAATATTCTGGG +
Preference number: 6 (lower is better)
Translates to: APSPAPHQCPLS*GLEFALSKYSG
Trigger: CCCAGAATATTTTGAAAGAGCAAACTCTAGCCCTCAGGAAAGAGGGCATTGGTGTGGTGCTGGACTCGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS TCA 72 bp AAATGGTGTGCTTGGACAGGGTCAGTCCCACTTTGTTaGTGTGAAGGGGAGATGTCTCGGACTGGAGCATCA +
Preference number: 6 (lower is better)
Translates to: KWCAWTGSVPLC*CEGEMSRTGAS
Trigger: TGATGCTCCAGTCCGAGACATCTCCCCTTCACATCAACAAAGTGGGACTGACCCTGTCCAAGCACACCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS GCA 72 bp CCCGCTCACTTCCAGCAAGATCGACGAGGTGGATCTTaGTCACAGTTTCACATGGCATTTCAGCGTCGAATT +
Preference number: 6 (lower is better)
Translates to: PAHFQQDRRGGS*SQFHMAFQRRI
Trigger: AATTCGACGCTGAAATGCCATGTGAAACTGTGAGCAAGATCCACCTCGTCGATCTTGCTGGAAGTGAGCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp TTATTTTGTCTAGATCTGGAGGCCCACCGAGAATGTTaGCATCATCTGTTGCCAAGAAGCTCGGGTCACCCC +
Preference number: 6 (lower is better)
Translates to: LFCLDLEAHREC*HHLLPRSSGHP
Trigger: GGGGTGACCCGAGCTTCTTGGCAACAGATGATGGCAACATTCTCGGTGGGCCTCCAGATCTAGACAAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp AAAGCTGAACCAGATCCTGATGGAGCAAAGGGTGATTaGTGTAGGCAGCAGCTTCAGACCCAGCCATTAGCA +
Preference number: 6 (lower is better)
Translates to: KAEPDPDGAKGD*CRQQLQTQPLA
Trigger: TGCTAATGGCTGGGTCTGAAGCTGCTGCCTACAGCAATCACCCTTTGCTCCATCAGGATCTGGTTCAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000211861.2
ENSMUST00000212106.2
CDS CCA 72 bp CTTTCTCTCCCACTTCTTTCTCTACTTGGCAGAGAGTaGTGTCTAGGCCTAGGACACCACTGTCAAGGGCAT +
Preference number: 6 (lower is better)
Translates to: LSLPLLSLLGRE*CLGLGHHCQGH
Trigger: ATGCCCTTGACAGTGGTGTCCTAGGCCTAGACACCACTCTCTGCCAAGTAGAGAAAGAAGTGGGAGAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp TCAGCTCACCTGGGTCACACATACTCCCAACATGCTTaGCTTGGCTCATTACTTTCGTCCCAGCCTGTATCA +
Preference number: 6 (lower is better)
Translates to: SAHLGHTYSQHA*LGSLLSSQPVS
Trigger: TGATACAGGCTGGGACGAAAGTAATGAGCCAAGCCAAGCATGTTGGGAGTATGTGTGACCCAGGTGAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS TCA 72 bp GTCATGTGCTCAAGGAGGTCTGTGAGAGGGCACTCTTaGAGCCTCAGCATTTGTTCTGGGAAAGGTACAAGA +
Preference number: 6 (lower is better)
Translates to: VMCSRRSVRGHS*SLSICSGKGTR
Trigger: TCTTGTACCTTTCCCAGAACAAATGCTGAGGCTTCAAGAGTGCCCTCTCACAGACCTCCTTGAGCACATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS TCA 72 bp CTGGCAAACAACATGTCATGTGCTCAAGGAGGTCTGTaGGAGGGCACTCTTGAAGCCTCAGCATTTGTTCTG +
Preference number: 6 (lower is better)
Translates to: LANNMSCAQGGL*EGTLEASAFVL
Trigger: CAGAACAAATGCTGAGGCTTCAAGAGTGCCCTCTCACAGACCTCCTTGAGCACATGACATGTTGTTTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS GCA 72 bp TCTAGCTTAGCCACAGCCTGCTCCAATGCCTCTCTTTaGTGTTTCTCCTGGGACTCCAGTATTTCCTTTTCC +
Preference number: 6 (lower is better)
Translates to: SSLATACSNASL*CFSWDSSISFS
Trigger: GGAAAAGGAAATACTGGAGTCCCAGGAGAAACAGCAAAGAGAGGCATTGGAGCAGGCTGTGGCTAAGCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp CATCACATCAGCAGGTGTATGGTTGGCATCACCAATTaGCCTGTGCAAATCATGAAGGCGTCTCTGGACTTC +
Preference number: 6 (lower is better)
Translates to: HHISRCMVGITN*PVQIMKASLDF
Trigger: GAAGTCCAGAGACGCCTTCATGATTTGCACAGGGCAATTGGTGATGCCAACCATACACCTGCTGATGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp TTCCTCTTCTCCCTAAGCTTGGCGGCTTCCTTCGGATaGTTAAAGCGGAACATGTTGGTTCTTCCCAAGAGT +
Preference number: 6 (lower is better)
Translates to: FLFSLSLAASFG*LKRNMLVLPKS
Trigger: ACTCTTGGGAAGAACCAACATGTTCCGCTTTAACCATCCGAAGGAAGCCGCCAAGCTTAGGGAGAAGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp AGCTCCTGGAATATCTGGACCTTCTCAGCTTGTTCGTaGCTGTTGAGCTCTTGGAGTTTGCGAAGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SSWNIWTFSACS*LLSSWSLRSSS
Trigger: AGAAGAGCTTCGCAAACTCCAAGAGCTCAACAGCCACGAACAAGCTGAGAAGGTCCAGATATTCCAGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp GAGAGTGAAGTGTTCTGTGACATGAGATGGCTTCTCTaGCTGCTCGGACACATCTCACTCTCTTCTCTAAGG +
Preference number: 6 (lower is better)
Translates to: ESEVFCDMRWLL*LLGHISLSSLR
Trigger: CCTTAGAGAAGAGAGTGAGATGTGTCCGAGCAGCCAGAGAAGCCATCTCATGTCACAGAACACTTCACTCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CCA 72 bp AGCAACTCAGTTCCTGAGTGTAGAACCATTCTCTCTTaGGAGGCCATAGAGAACGCTGTGGAGAGTGAAGTG +
Preference number: 6 (lower is better)
Translates to: SNSVPECRTILS*EAIENAVESEV
Trigger: CACTTCACTCTCCACAGCGTTCTCTATGGCCTCCCAAGAGAGAATGGTTCTACACTCAGGAACTGAGTTGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CCA 72 bp GCACTTGCTGTGACACGTGTTGCAACAATGTCCAGCTaGACTCAATTCCCCAGCTTTGTTTCTCTTCAGGAG +
Preference number: 6 (lower is better)
Translates to: ALAVTRVATMSS*TQFPSFVSLQE
Trigger: CTCCTGAAGAGAAACAAAGCTGGGGAATTGAGTCCAGCTGGACATTGTTGCAACACGTGTCACAGCAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CCA 72 bp AGTGAGAGGGAGAGCATGAAAAGTGCTCATGGAGCCTaGGCAACCATCTACCAGTACCAGAGCATACAGAAT +
Preference number: 6 (lower is better)
Translates to: SERESMKSAHGA*ATIYQYQSIQN
Trigger: ATTCTGTATGCTCTGGTACTGGTAGATGGTTGCCCAGGCTCCATGAGCACTTTTCATGCTCTCCCTCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CAA 72 bp TCTCTGCTCTGTAGCCTGGTCTCTGCAGTCTTTATTTaGTCTAGATCTGGAGGCCCACCGAGAATGTTGCCA +
Preference number: 6 (lower is better)
Translates to: SLLCSLVSAVFI*SRSGGPPRMLP
Trigger: TGGCAACATTCTCGGTGGGCCTCCAGATCTAGACAAAATAAAGACTGCAGAGACCAGGCTACAGAGCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 72 bp TCTTCTCTAAGGACACTGGGAGAGTCAGCAGCATCTTaGGACAGAAGTGGGATAACACACGGTGCAGACCAA +
Preference number: 6 (lower is better)
Translates to: SSLRTLGESAAS*DRSGITHGADQ
Trigger: TTGGTCTGCACCGTGTGTTATCCCACTTCTGTCCAAAGATGCTGCTGACTCTCCCAGTGTCCTTAGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS GCA 72 bp AAGAAGCTCGGGTCACCCCCTGCGTCACATTTTACATaGTCCAGAGCTACTTTCTCTTCTTGGACTTCTTTG +
Preference number: 6 (lower is better)
Translates to: KKLGSPPASHFT*SRATFSSWTSL
Trigger: CAAAGAAGTCCAAGAAGAGAAAGTAGCTCTGGAGCATGTAAAATGTGACGCAGGGGGTGACCCGAGCTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp TCTTCTTGGACTTCTTTGCTTAGGAGGTCTTTCTGTTaGACCAGGTCCTTCTCCAGGCTTGCTAGCTTGACA +
Preference number: 6 (lower is better)
Translates to: SSWTSLLRRSFC*TRSFSRLASLT
Trigger: TGTCAAGCTAGCAAGCCTGGAGAAGGACCTGGTCCAACAGAAAGACCTCCTAAGCAAAGAAGTCCAAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp AACTACCCGCTCGTCTTTGTTTCCAAACAGCTTCTTTaGGGGGAATTCAAGAGCAGCGAGCTCTGCATACTT +
Preference number: 6 (lower is better)
Translates to: NYPLVFVSKQLL*GEFKSSELCIL
Trigger: AAGTATGCAGAGCTCGCTGCTCTTGAATTCCCCCCAAAGAAGCTGTTTGGAAACAAAGACGAGCGGGTAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS CAA 72 bp GTCCTGAAAGAGGCTTCATCCCATCTAGTGGTTTCATaGATCCGACTGAAGAGAGCTTCACAGATCCGAGGT +
Preference number: 6 (lower is better)
Translates to: VLKEASSHLVVS*IRLKRASQIRG
Trigger: ACCTCGGATCTGTGAAGCTCTCTTCAGTCGGATCAATGAAACCACTAGATGGGATGAAGCCTCTTTCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 72 bp AGCCTGGCTATTTCAGCTCTCAGCTCACGGATGAGTTaGACGTTGGCATCCTCATTAATGGTAGGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: SLAISALSSRMS*TLASSLMVGLL
Trigger: CAACAAGCCTACCATTAATGAGGATGCCAACGTCAAACTCATCCGTGAGCTGAGAGCTGAAATAGCCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 72 bp CCAAGTCAAGGCCATGAAGGACAATATCTTGCTCTGTaGAAGCATCTTCTCTGCCGACGTAAGTCTGACCCT +
Preference number: 6 (lower is better)
Translates to: PSQGHEGQYLAL*KHLLCRRKSDP
Trigger: AGGGTCAGACTTACGTCGGCAGAGAAGATGCTTCAACAGAGCAAGATATTGTCCTTCATGGCCTTGACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 72 bp TTCTCAGCTTGTTCGTGGCTGTTGAGCTCTTGGAGTTaGCGAAGCTCTTCTCTGATGCGGAATAAGCTCTCT +
Preference number: 6 (lower is better)
Translates to: FSACSWLLSSWS*RSSSLMRNKLS
Trigger: AGAGAGCTTATTCCGCATCAGAGAAGAGCTTCGCAAACTCCAAGAGCTCAACAGCCACGAACAAGCTGAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 72 bp TCATCACATCAGCAGGTGTATGGTTGGCATCACCAATaGCCCTGTGCAAATCATGAAGGCGTCTCTGGACTT +
Preference number: 6 (lower is better)
Translates to: SSHQQVYGWHHQ*PCANHEGVSGL
Trigger: AAGTCCAGAGACGCCTTCATGATTTGCACAGGGCAATTGGTGATGCCAACCATACACCTGCTGATGTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 72 bp GAGGTCTGTGAGAGGGCACTCTTGAAGCCTCAGCATTaGTTCTGGGAAAGGTACAAGAGTCTGCTTAAATGC +
Preference number: 6 (lower is better)
Translates to: EVCERALLKPQH*FWERYKSLLKC
Trigger: GCATTTAAGCAGACTCTTGTACCTTTCCCAGAACAAATGCTGAGGCTTCAAGAGTGCCCTCTCACAGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CAA 90 bp TCCTCAACGTACGGTCCTTCTTTGGGATGCTCACGGACTCTTAAATaGAAGGTCTTAGATGACTTCCGCCTAAGTAGGTCTCTCACACGT +
Preference number: 6 (lower is better)
Translates to: SSTYGPSLGCSRTLK*KVLDDFRLSRSLTR
Trigger: ACGTGTGAGAGACCTACTTAGGCGGAAGTCATCTAAGACCTTCAATTTAAGAGTCCGTGAGCATCCCAAAGAAGGACCGTACGTTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 90 bp CAAACAACATGTCATGTGCTCAAGGAGGTCTGTGAGAGGGCACTCTaGAAGCCTCAGCATTTGTTCTGGGAAAGGTACAAGAGTCTGCTT +
Preference number: 6 (lower is better)
Translates to: QTTCHVLKEVCERAL*KPQHLFWERYKSLL
Trigger: AAGCAGACTCTTGTACCTTTCCCAGAACAAATGCTGAGGCTTCAAGAGTGCCCTCTCACAGACCTCCTTGAGCACATGACATGTTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CAA 90 bp CTGACTTCTGTCCTGAAAGAGGCTTCATCCCATCTAGTGGTTTCATaGATCCGACTGAAGAGAGCTTCACAGATCCGAGGTATTAAGCCA +
Preference number: 6 (lower is better)
Translates to: LTSVLKEASSHLVVS*IRLKRASQIRGIKP
Trigger: TGGCTTAATACCTCGGATCTGTGAAGCTCTCTTCAGTCGGATCAATGAAACCACTAGATGGGATGAAGCCTCTTTCAGGACAGAAGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 90 bp GGAAGCCCATGTTTCCTTAGGAAGACCAGCTCTACCTTTGACACTTaGTCCTTCTCTGGAACTATGACACATCTGAACTCACTCAGAGCT +
Preference number: 6 (lower is better)
Translates to: GSPCFLRKTSSTFDT*SFSGTMTHLNSLRA
Trigger: AGCTCTGAGTGAGTTCAGATGTGTCATAGTTCCAGAGAAGGACAAAGTGTCAAAGGTAGAGCTGGTCTTCCTAAGGAAACATGGGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000211861.2
ENSMUST00000212106.2
CDS CAA 90 bp GTGCTCAAGGAGGTCTGTGAGAGGGCACTCTTGAAGCCTCAGCATTaGTTCTGGGAAAGGTACAAGAGTCTGCTTAAATGCAATGATCTT +
Preference number: 6 (lower is better)
Translates to: VLKEVCERALLKPQH*FWERYKSLLKCNDL
Trigger: AAGATCATTGCATTTAAGCAGACTCTTGTACCTTTCCCAGAACAAATGCTGAGGCTTCAAGAGTGCCCTCTCACAGACCTCCTTGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS TCA 72 bp TCTTGGTGTCAGCAGAATAAAAAGAGAAGTCATAGGTaGAGGTCTTGGTCCGTTCTCTGCCTGAATCCCCAG +
Preference number: 6 (lower is better)
Translates to: SWCQQNKKRSHR*RSWSVLCLNPQ
Trigger: CTGGGGATTCAGGCAGAGAACGGACCAAGACCTTCACCTATGACTTCTCTTTTTATTCTGCTGACACCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS TCA 72 bp TTTCTCATTTTGTTGCTCACAACTCAATGTAGGAGCTaGTACTCTCTGAGGAGAGCTGCCAGTGGGCTGTTC +
Preference number: 6 (lower is better)
Translates to: FLILLLTTQCRS*YSLRRAASGLF
Trigger: GAACAGCCCACTGGCAGCTCTCCTCAGAGAGTATCAGCTCCTACATTGAGTTGTGAGCAACAAAATGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS GCA 72 bp CATGCTCCAGAGCTACTTTCTCTTCTTGGACTTCTTTaGTTAGGAGGTCTTTCTGTTGGACCAGGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: HAPELLSLLGLL*LGGLSVGPGPS
Trigger: AGAAGGACCTGGTCCAACAGAAAGACCTCCTAAGCAAAGAAGTCCAAGAAGAGAAAGTAGCTCTGGAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 90 bp AGGGTTTTCAGCCTGGCTATTTCAGCTCTCAGCTCACGGATGAGTTaGACGTTGGCATCCTCATTAATGGTAGGCTTGTTGATGATGTTT +
Preference number: 6 (lower is better)
Translates to: RVFSLAISALSSRMS*TLASSLMVGLLMMF
Trigger: AAACATCATCAACAAGCCTACCATTAATGAGGATGCCAACGTCAAACTCATCCGTGAGCTGAGAGCTGAAATAGCCAGGCTGAAAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 90 bp TCACATTTTACATGCTCCAGAGCTACTTTCTCTTCTTGGACTTCTTaGCTTAGGAGGTCTTTCTGTTGGACCAGGTCCTTCTCCAGGCTT +
Preference number: 6 (lower is better)
Translates to: SHFTCSRATFSSWTS*LRRSFCWTRSFSRL
Trigger: AAGCCTGGAGAAGGACCTGGTCCAACAGAAAGACCTCCTAAGCAAAGAAGTCCAAGAAGAGAAAGTAGCTCTGGAGCATGTAAAATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 90 bp CATTACTCTTCATCACATCAGCAGGTGTATGGTTGGCATCACCAATaGCCCTGTGCAAATCATGAAGGCGTCTCTGGACTTCTTCTTCAA +
Preference number: 6 (lower is better)
Translates to: HYSSSHQQVYGWHHQ*PCANHEGVSGLLLQ
Trigger: TTGAAGAAGAAGTCCAGAGACGCCTTCATGATTTGCACAGGGCAATTGGTGATGCCAACCATACACCTGCTGATGTGATGAAGAGTAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp GAAGGACAATATCTTGCTCTGTTGAAGCATCTTCTCTaGCGACGTAAGTCTGACCCTCCTTCAAGTGATACA +
Preference number: 6 (lower is better)
Translates to: EGQYLALLKHLL*RRKSDPPSSDT
Trigger: TGTATCACTTGAAGGAGGGTCAGACTTACGTCGGCAGAGAAGATGCTTCAACAGAGCAAGATATTGTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp AATGATTTTGCAGAAGGTCCTGTAGCTGGTGCTCTCTaGTCTGTAGCCTGGTCTCTGCAGTCTTTATTTTGT +
Preference number: 6 (lower is better)
Translates to: NDFAEGPVAGAL*SVAWSLQSLFC
Trigger: ACAAAATAAAGACTGCAGAGACCAGGCTACAGAGCAGAGAGCACCAGCTACAGGACCTTCTGCAAAATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp ATCCTGAGAATTGAAAGTGAGTTTCCAGATGTCGAGTaGCTGATCCTGTCCATCCTCAAGACACAACGGAAT +
Preference number: 6 (lower is better)
Translates to: ILRIESEFPDVE*LILSILKTQRN
Trigger: ATTCCGTTGTGTCTTGAGGATGGACAGGATCAGGCACTCGACATCTGGAAACTCACTTTCAATTCTCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000211861.2
ENSMUST00000212106.2
CDS CAA 72 bp TACGGTCCTTCTTTGGGATGCTCACGGACTCTTAAATaGAAGGTCTTAGATGACTTCCGCCTAAGTAGGTCT +
Preference number: 6 (lower is better)
Translates to: YGPSLGCSRTLK*KVLDDFRLSRS
Trigger: AGACCTACTTAGGCGGAAGTCATCTAAGACCTTCAATTTAAGAGTCCGTGAGCATCCCAAAGAAGGACCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 72 bp GCTATTTCAGCTCTCAGCTCACGGATGAGTTTGACGTaGGCATCCTCATTAATGGTAGGCTTGTTGATGATG +
Preference number: 6 (lower is better)
Translates to: AISALSSRMSLT*ASSLMVGLLMM
Trigger: CATCATCAACAAGCCTACCATTAATGAGGATGCCAACGTCAAACTCATCCGTGAGCTGAGAGCTGAAATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 72 bp AATCTTCACTTCAAACTCGAAGTGCTCGTCCTTCCCTaGGCCACACAGGACATAGCGAGGAATACTAATCTT +
Preference number: 6 (lower is better)
Translates to: NLHFKLEVLVLP*ATQDIARNTNL
Trigger: AAGATTAGTATTCCTCGCTATGTCCTGTGTGGCCAAGGGAAGGACGAGCACTTCGAGTTTGAAGTGAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS CAA 72 bp TTGCAACAATGTCCAGCTGGACTCAATTCCCCAGCTTaGTTTCTCTTCAGGAGCCATAAACCCATTGCCATT +
Preference number: 6 (lower is better)
Translates to: LQQCPAGLNSPA*FLFRSHKPIAI
Trigger: AATGGCAATGGGTTTATGGCTCCTGAAGAGAAACAAAGCTGGGGAATTGAGTCCAGCTGGACATTGTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS TCA 72 bp CGACGTAAGTCTGACCCTCCTTCAAGTGATACAAGATaGTTCCAGTGCTCAGAAGATCATCATCAATGCCAA +
Preference number: 6 (lower is better)
Translates to: RRKSDPPSSDTR*FQCSEDHHQCQ
Trigger: TTGGCATTGATGATGATCTTCTGAGCACTGGAATCATCTTGTATCACTTGAAGGAGGGTCAGACTTACGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp CCTGGCAGAGCTCATACTTTAGCTTACGTTGAGTGGTaGCATTGTGAAGTTCCTCATTACTCTTCATCACAT +
Preference number: 6 (lower is better)
Translates to: PGRAHTLAYVEW*HCEVPHYSSSH
Trigger: ATGTGATGAAGAGTAATGAGGAACTTCACAATGGCACCACTCAACGTAAGCTAAAGTATGAGCTCTGCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211861.2
CDS CCA 72 bp TCATTACTTTCGTCCCAGCCTGTATCAGGTGGCCGCTaGTGTCTTTATAAAGGTCTGAGAATTTGTGGTAAA +
Preference number: 6 (lower is better)
Translates to: SLLSSQPVSGGR*CLYKGLRICGK
Trigger: TTTACCACAAATTCTCAGACCTTTATAAAGACACCAGCGGCCACCTGATACAGGCTGGGACGAAAGTAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CAA 90 bp TGGCCTCCATATTTCCATGAAGAAAGTAGACCATGTCTACCAAGGTaGTCTGGAAATTGCAAGACAACTGAACTCCATTCGCCAAAGCTA +
Preference number: 6 (lower is better)
Translates to: WPPYFHEESRPCLPR*SGNCKTTELHSPKL
Trigger: TAGCTTTGGCGAATGGAGTTCAGTTGTCTTGCAATTTCCAGACAACCTTGGTAGACATGGTCTACTTTCTTCATGGAAATATGGAGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000211861.2
ENSMUST00000212106.2
CDS TCA 72 bp TCCTTGGTCAATTCTTGGACTCTTGCTTCATTCTGGTaGAGTTTTTCCTCCATACTTAAAGCTGTAGGGGAG +
Preference number: 6 (lower is better)
Translates to: SLVNSWTLASFW*SFSSILKAVGE
Trigger: CTCCCCTACAGCTTTAAGTATGGAGGAAAAACTTCACCAGAATGAAGCAAGAGTCCAAGAATTGACCAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS GCA 72 bp TTGGATAAATCCTCAACGTACGGTCCTTCTTTGGGATaGTCACGGACTCTTAAATTGAAGGTCTTAGATGAC +
Preference number: 6 (lower is better)
Translates to: LDKSSTYGPSLG*SRTLKLKVLDD
Trigger: GTCATCTAAGACCTTCAATTTAAGAGTCCGTGAGCATCCCAAAGAAGGACCGTACGTTGAGGATTTATCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CCA 72 bp AAGGCACAAAAACTTGCTTCTTCTTCACAAGAGGGTTaGCTGCATCCTGAGATAAATCAGCTAAGGCAGAAA +
Preference number: 6 (lower is better)
Translates to: KAQKLASSSQEG*LHPEINQLRQK
Trigger: TTTCTGCCTTAGCTGATTTATCTCAGGATGCAGCCAACCCTCTTGTGAAGAAGAAGCAAGTTTTTGTGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 90 bp TTCTGGACTAAATGCTTGGATAAATCCTCAACGTACGGTCCTTCTTaGGGATGCTCACGGACTCTTAAATTGAAGGTCTTAGATGACTTC +
Preference number: 6 (lower is better)
Translates to: FWTKCLDKSSTYGPS*GCSRTLKLKVLDDF
Trigger: GAAGTCATCTAAGACCTTCAATTTAAGAGTCCGTGAGCATCCCAAAGAAGGACCGTACGTTGAGGATTTATCCAAGCATTTAGTCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS TCA 72 bp ATGTCTACCAAGGTTGTCTGGAAATTGCAAGACAACTaGACTCCATTCGCCAAAGCTAAAACAGGGATTTCT +
Preference number: 6 (lower is better)
Translates to: MSTKVVWKLQDN*TPFAKAKTGIS
Trigger: AGAAATCCCTGTTTTAGCTTTGGCGAATGGAGTTCAGTTGTCTTGCAATTTCCAGACAACCTTGGTAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000211861.2
ENSMUST00000212106.2
CDS GCA 72 bp GAAAGTAGACCATGTCTACCAAGGTTGTCTGGAAATTaGAAGACAACTGAACTCCATTCGCCAAAGCTAAAA +
Preference number: 6 (lower is better)
Translates to: ESRPCLPRLSGN*KTTELHSPKLK
Trigger: TTTTAGCTTTGGCGAATGGAGTTCAGTTGTCTTGCAATTTCCAGACAACCTTGGTAGACATGGTCTACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000211861.2
ENSMUST00000212106.2
CDS GCA 72 bp CATTTGTTCTGGGAAAGGTACAAGAGTCTGCTTAAATaGAATGATCTTCCCAGCATCTTCATAGTCAAGACG +
Preference number: 6 (lower is better)
Translates to: HLFWERYKSLLK*NDLPSIFIVKT
Trigger: CGTCTTGACTATGAAGATGCTGGGAAGATCATTGCATTTAAGCAGACTCTTGTACCTTTCCCAGAACAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212106.2
CDS CAA 72 bp AAATGCTTGGATAAATCCTCAACGTACGGTCCTTCTTaGGGATGCTCACGGACTCTTAAATTGAAGGTCTTA +
Preference number: 6 (lower is better)
Translates to: KCLDKSSTYGPS*GCSRTLKLKVL
Trigger: TAAGACCTTCAATTTAAGAGTCCGTGAGCATCCCAAAGAAGGACCGTACGTTGAGGATTTATCCAAGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS TCA 72 bp ATGTTTTATGCATTTCTCGAAAACGACTGTAGCGCCTaGATACAGTCCATGTCTCATCTAGGACAGAAATCT +
Preference number: 6 (lower is better)
Translates to: MFYAFLENDCSA*IQSMSHLGQKS
Trigger: AGATTTCTGTCCTAGATGAGACATGGACTGTATTCAGGCGCTACAGTCGTTTTCGAGAAATGCATAAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS GCA 72 bp AATACATCCGCTCATACTTTAGCTTACGTTGAGTGGTaGCATTGTGAAGTTCCTCATTACTCTTCATCACAT +
Preference number: 6 (lower is better)
Translates to: NTSAHTLAYVEW*HCEVPHYSSSH
Trigger: ATGTGATGAAGAGTAATGAGGAACTTCACAATGGCACCACTCAACGTAAGCTAAAGTATGAGCGGATGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000230763.2
CDS GCA 72 bp CCCATATGCAAAGACACAAGCATTGTAACCTTCAAATaGAGATTTCACAACATCTGTACCCAGAGTTTTGAA +
Preference number: 6 (lower is better)
Translates to: PICKDTSIVTFK*RFHNICTQSFE
Trigger: TTCAAAACTCTGGGTACAGATGTTGTGAAATCTGCATTTGAAGGTTACAATGCTTGTGTCTTTGCATATGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2
ENSMUST00000230763.2
CDS CAA 72 bp CCTTTTACTTTCGAGTTTTTCAAGTTCTTCACGCTGTaGTCTCTCAAACTCAAGTCCAGGGTTATACAACAT +
Preference number: 6 (lower is better)
Translates to: PFTFEFFKFFTL*SLKLKSRVIQH
Trigger: ATGTTGTATAACCCTGGACTTGAGTTTGAGAGACAACAGCGTGAAGAACTTGAAAAACTCGAAAGTAAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043589.8
ENSMUST00000211861.2