Pregenerated sensors for KIF14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041498Ensembl transcript IDs: ENSMUST00000047817.12, ENSMUST00000189413.7, ENSMUST00000195274.3, ENSMUST00000201676.4
Found 534 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TACCCACTGAATCCTATTCGGGGTGCAGTCCCCAGAGGACACTGCTaGGGTTGCGTCTCCGTGTGGTTCACAGGCGCGTCTTGGCCCGCT | + |
Preference number: 1 (lower is better) Translates to: YPLNPIRGAVPRGHC*GCVSVWFTGASWPA Trigger: AGCGGGCCAAGACGCGCCTGTGAACCACACGGAGACGCAACCCCAGCAGTGTCCTCTGGGGACTGCACCCCGAATAGGATTCAGTGGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR TCA 90 bp | GGGACTGACTGTAACCCCAGCATTCAGGAGGCAAAGGCAGCAAGGTaGCAGGGTGAGGCCACACCGCACTGCTCAGCTGGACCAAGTCTA | + |
Preference number: 1 (lower is better) Translates to: GTDCNPSIQEAKAAR*QGEATPHCSAGPSL Trigger: TAGACTTGGTCCAGCTGAGCAGTGCGGTGTGGCCTCACCCTGTCACCTTGCTGCCTTTGCCTCCTGAATGCTGGGGTTACAGTCAGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR GCA 90 bp | CCACTCCACAGTACTGGCTTTCATCTGCTTAGTGACCTCCTCTCGTaGACTCTGCCTGGAGAGGTCCTGCCTGAGGTCTTGCGCGGTCTC | + |
Preference number: 1 (lower is better) Translates to: PLHSTGFHLLSDLLS*TLPGEVLPEVLRGL Trigger: GAGACCGCGCAAGACCTCAGGCAGGACCTCTCCAGGCAGAGTGCACGAGAGGAGGTCACTAAGCAGATGAAAGCCAGTACTGTGGAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 90 bp | ACAAACAGACCAATGAACCAGCTAGACAGCACCAGGGTGGTGAAGTaGGAGTGGGTGGGTGGGTGGGTGGGGGAGCACCCTCATAGAAGC | + |
Preference number: 1 (lower is better) Translates to: TNRPMNQLDSTRVVK*EWVGGWVGEHPHRS Trigger: GCTTCTATGAGGGTGCTCCCCCACCCACCCACCCACCCACTCCCACTTCACCACCCTGGTGCTGTCTAGCTGGTTCATTGGTCTGTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR GCA 90 bp | AGCACGAGGCAGTTCATTTCCGCAGCTGCCAGCAGAGGCAGAGTGTaGGCTGAAGTCACTGTGAAGCTTGCGAGCCAGGCTGCAGATAGT | + |
Preference number: 1 (lower is better) Translates to: STRQFISAAASRGRV*AEVTVKLASQAADS Trigger: ACTATCTGCAGCCTGGCTCGCAAGCTTCACAGTGACTTCAGCGCACACTCTGCCTCTGCTGGCAGCTGCGGAAATGAACTGCCTCGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR TCA 90 bp | CGCCCTCCTTCCTCTCTGTCACCCAGTGCCCACGGACATAGTCCATaGAGTGGTGGGACTTTTCCTTCTGCAGATGAGGAACCAGGAAGG | + |
Preference number: 1 (lower is better) Translates to: RPPSSLSPSAHGHSP*SGGTFPSADEEPGR Trigger: CCTTCCTGGTTCCTCATCTGCAGAAGGAAAAGTCCCACCACTTCATGGACTATGTCCGTGGGCACTGGGTGACAGAGAGGAAGGAGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR GCA 90 bp | AGGCGCGTCTTGGCCCGCTTTTCCCGCAGTCAGCCCTGTCTGACTTaGACTGCTCTTCCTTGCTATTCGAAGAACAAGACTCCCAGGGTT | + |
Preference number: 1 (lower is better) Translates to: RRVLARFSRSQPCLT*TALPCYSKNKTPRV Trigger: AACCCTGGGAGTCTTGTTCTTCGAATAGCAAGGAAGAGCAGTGCAAGTCAGACAGGGCTGACTGCGGGAAAAGCGGGCCAAGACGCGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 90 bp | TGCTCGTTACAGAAGGGAGACTACCATTGGCTTATCATCTGCTACTaGGCAAGCGCCCTCCTTCCTCTCTGTCACCCAGTGCCCACGGAC | + |
Preference number: 1 (lower is better) Translates to: CSLQKGDYHWLIICY*ASALLPLCHPVPTD Trigger: GTCCGTGGGCACTGGGTGACAGAGAGGAAGGAGGGCGCTTGCCCAGTAGCAGATGATAAGCCAATGGTAGTCTCCCTTCTGTAACGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR TCA 90 bp | TTCACAGGCGCGTCTTGGCCCGCTTTTCCCGCAGTCAGCCCTGTCTaGCTTGCACTGCTCTTCCTTGCTATTCGAAGAACAAGACTCCCA | + |
Preference number: 1 (lower is better) Translates to: FTGASWPAFPAVSPV*LALLFLAIRRTRLP Trigger: TGGGAGTCTTGTTCTTCGAATAGCAAGGAAGAGCAGTGCAAGTCAGACAGGGCTGACTGCGGGAAAAGCGGGCCAAGACGCGCCTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 90 bp | TTTTGCTGCTCGTTACAGAAGGGAGACTACCATTGGCTTATCATCTaGTACTGGGCAAGCGCCCTCCTTCCTCTCTGTCACCCAGTGCCC | + |
Preference number: 1 (lower is better) Translates to: FCCSLQKGDYHWLII*YWASALLPLCHPVP Trigger: GGGCACTGGGTGACAGAGAGGAAGGAGGGCGCTTGCCCAGTAGCAGATGATAAGCCAATGGTAGTCTCCCTTCTGTAACGAGCAGCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR GCA 90 bp | ACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATaGTTACAGGCAAGAAGGCAGCTGTTTACATACAAAGGCCTGCAC | + |
Preference number: 1 (lower is better) Translates to: TKRSNLGPTRAQQAP*LQARRQLFTYKGLH Trigger: GTGCAGGCCTTTGTATGTAAACAGCTGCCTTCTTGCCTGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CCA 90 bp | CAGAATGAGACCGGGAGCTTTTATCGTTCATGCCGGTGGCCGCCGTaGCTCTCTGTTTATTTCCCAGTTCCAGCCAGCTCTGAATATCAG | + |
Preference number: 1 (lower is better) Translates to: QNETGSFYRSCRWPP*LSVYFPVPASSEYQ Trigger: CTGATATTCAGAGCTGGCTGGAACTGGGAAATAAACAGAGAGCCACGGCGGCCACCGGCATGAACGATAAAAGCTCCCGGTCTCATTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR TCA 90 bp | CTCGGTAACAGAAGTGTTACTTCCAGAGCAATGACCGGTACAGAGTaGACCGCAGGAGGAAACCCAGTGGCCAAAGAGGGAAAGGGAAAC | + |
Preference number: 1 (lower is better) Translates to: LGNRSVTSRAMTGTE*TAGGNPVAKEGKGN Trigger: GTTTCCCTTTCCCTCTTTGGCCACTGGGTTTCCTCCTGCGGTTCACTCTGTACCGGTCATTGCTCTGGAAGTAACACTTCTGTTACCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR GCA 90 bp | GTTTCTCTGTGTAGACCAGGCTGTCCTCGAGCTCAGAGATCTGCCTaGCTCTGCCTCCTGAGTGCTGAGACTAAAGGCATGTTGTTTATG | + |
Preference number: 1 (lower is better) Translates to: VSLCRPGCPRAQRSA*LCLLSAETKGMLFM Trigger: CATAAACAACATGCCTTTAGTCTCAGCACTCAGGAGGCAGAGGCAGGCAGATCTCTGAGCTCGAGGACAGCCTGGTCTACACAGAGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR GCA 90 bp | TCCTTTGAGACTCTTCCCTCAGCTCCGCCTCTAGGGCCTGGATTTTaGGCTCATACACAGCTTTTTGGGAAGAAAGTTCTTGCTGGGCCA | + |
Preference number: 1 (lower is better) Translates to: SFETLPSAPPLGPGF*AHTQLFGKKVLAGP Trigger: TGGCCCAGCAAGAACTTTCTTCCCAAAAAGCTGTGTATGAGCGCAAAATCCAGGCCCTAGAGGCGGAGCTGAGGGAAGAGTCTCAAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 90 bp | AAGGGAAGAAACTGGTGTGCTTGTAATGTCGGGCTCCCACTCATCTaGAGGGTCACAGAAGACATCCTCATCCCTGTCACCACCGTTACT | + |
Preference number: 1 (lower is better) Translates to: KGRNWCACNVGLPLI*RVTEDILIPVTTVT Trigger: AGTAACGGTGGTGACAGGGATGAGGATGTCTTCTGTGACCCTGCAGATGAGTGGGAGCCCGACATTACAAGCACACCAGTTTCTTCCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 90 bp | CCTGGGTACTGGAGACTTTGCTGCTGTTTTCCAGAACACAGAGCTTaGTCCCTTTCAGAACAGCTAGCTGACCCACACACTGAACAGCCT | + |
Preference number: 1 (lower is better) Translates to: PGYWRLCCCFPEHRA*SLSEQLADPHTEQP Trigger: AGGCTGTTCAGTGTGTGGGTCAGCTAGCTGTTCTGAAAGGGAGCAAGCTCTGTGTTCTGGAAAACAGCAGCAAAGTCTCCAGTACCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 90 bp | AGTGTTCAGTGCATAAAACGCACACCCAGCTTCCAAGCAGAGAACTaGGAAATAAGGCTGATCCATGTCCAGCCAACCCAGAGGGTGGGA | + |
Preference number: 1 (lower is better) Translates to: SVQCIKRTPSFQAEN*EIRLIHVQPTQRVG Trigger: TCCCACCCTCTGGGTTGGCTGGACATGGATCAGCCTTATTTCCCAGTTCTCTGCTTGGAAGCTGGGTGTGCGTTTTATGCACTGAACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR TCA 90 bp | GCCTCGCTGAGCCAGTACAAGGTAGAAAATCACCCAGCCAGTGTTTaGACAAAACCACAAGCTGCTCAAAGGCACAAGCAACCTGGATGG | + |
Preference number: 1 (lower is better) Translates to: ASLSQYKVENHPASV*TKPQAAQRHKQPGW Trigger: CCATCCAGGTTGCTTGTGCCTTTGAGCAGCTTGTGGTTTTGTTCAAACACTGGCTGGGTGATTTTCTACCTTGTACTGGCTCAGCGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 90 bp | GCTTCTAAGATCCTTGCATGTCGGATTCTATGGTCTTCTAAGGCCTaGTTTGTGGCCAGGGTCTCCATCTCCAGTCGCCTTTTGTTCACG | + |
Preference number: 1 (lower is better) Translates to: ASKILACRILWSSKA*FVARVSISSRLLFT Trigger: CGTGAACAAAAGGCGACTGGAGATGGAGACCCTGGCCACAAAGCAGGCCTTAGAAGACCATAGAATCCGACATGCAAGGATCTTAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 90 bp | CAAGGTAGAAAATCACCCAGCCAGTGTTTGAACAAAACCACAAGCTaGTCAAAGGCACAAGCAACCTGGATGGTAAGAGCCTGTGCCGCC | + |
Preference number: 1 (lower is better) Translates to: QGRKSPSQCLNKTTS*SKAQATWMVRACAA Trigger: GGCGGCACAGGCTCTTACCATCCAGGTTGCTTGTGCCTTTGAGCAGCTTGTGGTTTTGTTCAAACACTGGCTGGGTGATTTTCTACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 90 bp | TTCATGTCCTCGTTGACTTTGGCGATATTGACTATCAGGCGGGCTTaGGTGGCGTATCTGAGTGTGCTCAGCGTTTCCTCTATGTTGCTG | + |
Preference number: 1 (lower is better) Translates to: FMSSLTLAILTIRRA*VAYLSVLSVSSMLL Trigger: CAGCAACATAGAGGAAACGCTGAGCACACTCAGATACGCCACCCAAGCCCGCCTGATAGTCAATATCGCCAAAGTCAACGAGGACATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 90 bp | CAGTGTTTGAACAAAACCACAAGCTGCTCAAAGGCACAAGCAACCTaGATGGTAAGAGCCTGTGCCGCCCGGTCAGAGAACAGGTTATCT | + |
Preference number: 1 (lower is better) Translates to: QCLNKTTSCSKAQAT*MVRACAARSENRLS Trigger: AGATAACCTGTTCTCTGACCGGGCGGCACAGGCTCTTACCATCCAGGTTGCTTGTGCCTTTGAGCAGCTTGTGGTTTTGTTCAAACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR TCA 90 bp | GTGATCATCGGCAATCAGCACTCCAGACAACTGGATGTCATGGCTTaGGCTTGGTGTGTGCTTTCCAACTGTGGTCACTCCTTCCTTTAC | + |
Preference number: 1 (lower is better) Translates to: VIIGNQHSRQLDVMA*AWCVLSNCGHSFLY Trigger: GTAAAGGAAGGAGTGACCACAGTTGGAAAGCACACACCAAGCTCAAGCCATGACATCCAGTTGTCTGGAGTGCTGATTGCCGATGATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 90 bp | CTGGGGCACCCTCTCAGCGCAGATACAATCATCTCAACGGTTTGTTaGAAGCACGACTTCAGCTTCAAGAATTCTGACGCAAGGCTTAAC | + |
Preference number: 1 (lower is better) Translates to: LGHPLSADTIISTVC*KHDFSFKNSDARLN Trigger: GTTAAGCCTTGCGTCAGAATTCTTGAAGCTGAAGTCGTGCTTGCAACAAACCGTTGAGATGATTGTATCTGCGCTGAGAGGGTGCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 90 bp | ACAACTGGATGTCATGGCTTGAGCTTGGTGTGTGCTTTCCAACTGTaGTCACTCCTTCCTTTACCATGTAGAGCAGCATCTCCGACAGCT | + |
Preference number: 1 (lower is better) Translates to: TTGCHGLSLVCAFQL*SLLPLPCRAASPTA Trigger: AGCTGTCGGAGATGCTGCTCTACATGGTAAAGGAAGGAGTGACCACAGTTGGAAAGCACACACCAAGCTCAAGCCATGACATCCAGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 90 bp | TGGTGCTCGGTTTTTCCATTAATCCAGATGAGTGTGAAGACTGCATaGTCTGAATCGGATGGATGTCATGCAGACAGCCAGAGACTCTCC | + |
Preference number: 1 (lower is better) Translates to: WCSVFPLIQMSVKTA*SESDGCHADSQRLS Trigger: GGAGAGTCTCTGGCTGTCTGCATGACATCCATCCGATTCAGAGCATGCAGTCTTCACACTCATCTGGATTAATGGAAAAACCGAGCACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR TCA 90 bp | GCTTTTTGGGAAGAAAGTTCTTGCTGGGCCATCTCCTTTGCGATCTaGATTCCTTGCATCATTTCTTCCTTCGCCTTCAGCTGCGCATCT | + |
Preference number: 1 (lower is better) Translates to: AFWEESSCWAISFAI*IPCIISSFAFSCAS Trigger: AGATGCGCAGCTGAAGGCGAAGGAAGAAATGATGCAAGGAATTCAGATCGCAAAGGAGATGGCCCAGCAAGAACTTTCTTCCCAAAAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR TCA 90 bp | CTCGGTTTTTCCATTAATCCAGATGAGTGTGAAGACTGCATGCTCTaGATCGGATGGATGTCATGCAGACAGCCAGAGACTCTCCTGTTC | + |
Preference number: 1 (lower is better) Translates to: LGFSINPDECEDCML*IGWMSCRQPETLLF Trigger: GAACAGGAGAGTCTCTGGCTGTCTGCATGACATCCATCCGATTCAGAGCATGCAGTCTTCACACTCATCTGGATTAATGGAAAAACCGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 90 bp | AGAGTGGATTCCCGATATGGAATAAAAACCCTCTTTCCGTTTGCTTaGTCGGAGAGTGCAGATATGACCTTCCCCAAAGTCAGCAAGGAC | + |
Preference number: 1 (lower is better) Translates to: RVDSRYGIKTLFPFA*SESADMTFPKVSKD Trigger: GTCCTTGCTGACTTTGGGGAAGGTCATATCTGCACTCTCCGAGCAAGCAAACGGAAAGAGGGTTTTTATTCCATATCGGGAATCCACTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 90 bp | ATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATaGGATATTACACTAATAGATTACTGGAGCTGCCGCCCACCGCAT | + |
Preference number: 1 (lower is better) Translates to: IHRSTSFALSICLTQ*DITLIDYWSCRPPH Trigger: ATGCGGTGGGCGGCAGCTCCAGTAATCTATTAGTGTAATATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR TCA 90 bp | TATTCCTGGAATACATCTTCCAAGAGCTCCAGATATCGGCCAGGTTaGCCTCTCCTAGCCCGAACCCAAGCTGTCACCAACATTAAATTA | + |
Preference number: 1 (lower is better) Translates to: YSWNTSSKSSRYRPG*PLLARTQAVTNIKL Trigger: TAATTTAATGTTGGTGACAGCTTGGGTTCGGGCTAGGAGAGGTCAACCTGGCCGATATCTGGAGCTCTTGGAAGATGTATTCCAGGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR GCA 90 bp | TGTAAGAGTGGATTCCCGATATGGAATAAAAACCCTCTTTCCGTTTaGTTGCTCGGAGAGTGCAGATATGACCTTCCCCAAAGTCAGCAA | + |
Preference number: 1 (lower is better) Translates to: CKSGFPIWNKNPLSV*LLGECRYDLPQSQQ Trigger: TTGCTGACTTTGGGGAAGGTCATATCTGCACTCTCCGAGCAAGCAAACGGAAAGAGGGTTTTTATTCCATATCGGGAATCCACTCTTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 90 bp | CTCCGAGATGTGCGTCCCGTTTACATATGTCTTTGCTTCTCCAGCTaGGACAATACTCACTGTTCCTCCAAAATTTCTGATAGTACAGTG | + |
Preference number: 1 (lower is better) Translates to: LRDVRPVYICLCFSS*DNTHCSSKISDSTV Trigger: CACTGTACTATCAGAAATTTTGGAGGAACAGTGAGTATTGTCCCAGCTGGAGAAGCAAAGACATATGTAAACGGGACGCACATCTCGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 90 bp | ATTGGCTTCCTGAATCATCGTGGAGAGTTTCATGGAGTTCCAGTTTaGCTGAATGGTGAAAGTTTTATCCCTGTTTCCCCGATTCTCCTG | + |
Preference number: 1 (lower is better) Translates to: IGFLNHRGEFHGVPV*LNGESFIPVSPILL Trigger: CAGGAGAATCGGGGAAACAGGGATAAAACTTTCACCATTCAGCCAAACTGGAACTCCATGAAACTCTCCACGATGATTCAGGAAGCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 90 bp | TTAGATTCAAACTTTTCCAGGCTCCAGAAAGTTGAGATCCCAAGCTaGAGGTTACGAACTCGAACAGAGGTATCAGAACGGCCTTTGTCT | + |
Preference number: 1 (lower is better) Translates to: LDSNFSRLQKVEIPS*RLRTRTEVSERPLS Trigger: AGACAAAGGCCGTTCTGATACCTCTGTTCGAGTTCGTAACCTCCAGCTTGGGATCTCAACTTTCTGGAGCCTGGAAAAGTTTGAATCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR TCA 90 bp | CATTGCTGCAAGTTTAGATTCAAACTTTTCCAGGCTCCAGAAAGTTaGGATCCCAAGCTGGAGGTTACGAACTCGAACAGAGGTATCAGA | + |
Preference number: 1 (lower is better) Translates to: HCCKFRFKLFQAPES*DPKLEVTNSNRGIR Trigger: TCTGATACCTCTGTTCGAGTTCGTAACCTCCAGCTTGGGATCTCAACTTTCTGGAGCCTGGAAAAGTTTGAATCTAAACTTGCAGCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 90 bp | TTTTCAATTTCTAAAGCTTCTAAGATCCTTGCATGTCGGATTCTATaGTCTTCTAAGGCCTGCTTTGTGGCCAGGGTCTCCATCTCCAGT | + |
Preference number: 1 (lower is better) Translates to: FSISKASKILACRIL*SSKACFVARVSISS Trigger: ACTGGAGATGGAGACCCTGGCCACAAAGCAGGCCTTAGAAGACCATAGAATCCGACATGCAAGGATCTTAGAAGCTTTAGAAATTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 90 bp | TGCAAATCCCGGGAAGAAAGGACTCTGATGAATTTGAGTAAATGGTaGTCGGTTTTTCCATTAATCCAGATGAGTGTGAAGACTGCATGC | + |
Preference number: 1 (lower is better) Translates to: CKSREERTLMNLSKW*SVFPLIQMSVKTAC Trigger: GCATGCAGTCTTCACACTCATCTGGATTAATGGAAAAACCGAGCACCATTTACTCAAATTCATCAGAGTCCTTTCTTCCCGGGATTTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR TCA 90 bp | TCATCCTGCTCTTCATGGGCTTTGGAGATGGCAATCACCCCATTATaGAGCCTAAGGAGATTATTTATCAGGCTATCTGCTATAGTTTTC | + |
Preference number: 1 (lower is better) Translates to: SSCSSWALEMAITPL*SLRRLFIRLSAIVF Trigger: GAAAACTATAGCAGATAGCCTGATAAATAATCTCCTTAGGCTTCATAATGGGGTGATTGCCATCTCCAAAGCCCATGAAGAGCAGGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 90 bp | CTTTGCAAATCCCGGGAAGAAAGGACTCTGATGAATTTGAGTAAATaGTGCTCGGTTTTTCCATTAATCCAGATGAGTGTGAAGACTGCA | + |
Preference number: 1 (lower is better) Translates to: LCKSREERTLMNLSK*CSVFPLIQMSVKTA Trigger: TGCAGTCTTCACACTCATCTGGATTAATGGAAAAACCGAGCACCATTTACTCAAATTCATCAGAGTCCTTTCTTCCCGGGATTTGCAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR TCA 90 bp | CTGGAGGTTACGAACTCGAACAGAGGTATCAGAACGGCCTTTGTCTaGTGCATCATGTCTGCCAAAAATATAGCACTTTTTAAATTTGTC | + |
Preference number: 1 (lower is better) Translates to: LEVTNSNRGIRTAFV*CIMSAKNIALFKFV Trigger: GACAAATTTAAAAAGTGCTATATTTTTGGCAGACATGATGCATCAGACAAAGGCCGTTCTGATACCTCTGTTCGAGTTCGTAACCTCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 90 bp | TTACTGTGGAAACCAGTGTTGGTAGATATACTATTAAACACATCATaGTTCAAGGGCTGTAATACACAACATTGGCATCTGCTTGCACCA | + |
Preference number: 1 (lower is better) Translates to: LLWKPVLVDILLNTS*FKGCNTQHWHLLAP Trigger: TGGTGCAAGCAGATGCCAATGTTGTGTATTACAGCCCTTGAAGCATGATGTGTTTAATAGTATATCTACCAACACTGGTTTCCACAGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR GCA 90 bp | CATCATAAAATACCATTCATAGCCACATCAATCCAGCCTGAGATCTaGTTTACTTTCTTGACCCGAACTCCTAGATATCCACAATTCACA | + |
Preference number: 1 (lower is better) Translates to: HHKIPFIATSIQPEI*FTFLTRTPRYPQFT Trigger: TGTGAATTGTGGATATCTAGGAGTTCGGGTCAAGAAAGTAAAGCAGATCTCAGGCTGGATTGATGTGGCTATGAATGGTATTTTATGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR TCA 90 bp | CTGTATAATCTTCATGACTTTGTTTTGAGCCTCTTTAACCATCGATaGAATATCCGAACAGCATCCCTGCAAAAACAATTGCAAATAGCC | + |
Preference number: 1 (lower is better) Translates to: LYNLHDFVLSLFNHR*NIRTASLQKQLQIA Trigger: GGCTATTTGCAATTGTTTTTGCAGGGATGCTGTTCGGATATTTCATCGATGGTTAAAGAGGCTCAAAACAAAGTCATGAAGATTATACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CCA 90 bp | TCAGTCGCTGCCCACTCGAGTGGGCGGTGGAGCAGCGCTCACTGCCGGCCAGGTTGCCGGTGGCCGCCGTaGCTCTCTGTTTATTTCCCA | + |
Preference number: 2 (lower is better) Translates to: SVAAHSSGRWSSAHCRPGCRWPP*LSVYFP Trigger: TGGGAAATAAACAGAGAGCCACGGCGGCCACCGGCA...ACCTGGCCGGCAGTGAGCGCTGCTCCACCGCCCACTCGAGTGGGCAGCGACTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 90 bp | AGGACACTGCTGGGGTTGCGTCTCCGTGTGGTTCACAGGCGCGTCTaGGCCCGCTTTTCCCGCAGTCAGCCCTGTCTGACTTGCACTGCT | + |
Preference number: 2 (lower is better) Translates to: RTLLGLRLRVVHRRV*ARFSRSQPCLTCTA Trigger: AGCAGTGCAAGTCAGACAGGGCTGACTGCGGGAAAAGCGGGCCAAGACGCGCCTGTGAACCACACGGAGACGCAACCCCAGCAGTGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR CAA 90 bp | CAGGCGCGTCTTGGCCCGCTTTTCCCGCAGTCAGCCCTGTCTGACTaGCACTGCTCTTCCTTGCTATTCGAAGAACAAGACTCCCAGGGT | + |
Preference number: 2 (lower is better) Translates to: QARLGPLFPQSALSD*HCSSLLFEEQDSQG Trigger: ACCCTGGGAGTCTTGTTCTTCGAATAGCAAGGAAGAGCAGTGCAAGTCAGACAGGGCTGACTGCGGGAAAAGCGGGCCAAGACGCGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR CCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAGGGTTAGGAGGCTTGTaGAGGGAAAATTGGGAAGGG | + |
Preference number: 2 (lower is better) Translates to: HGSADHGRECCSPISPHRGLGGL*RENWEG Trigger: CCCTTCCCAATTTTCCCTCCACAAGCCTCCTAACCC...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | GTCAGCACGAGGCAGTTCATTTCCGCAGCTGCCAGCAGAGGCAGAGTGTGCGCTAAGGCACAAGCAACCTaGATGGTAAGAGCCTGTGCC | + |
Preference number: 2 (lower is better) Translates to: VSTRQFISAAASRGRVCAKAQAT*MVRACA Trigger: GGCACAGGCTCTTACCATCCAGGTTGCTTGTGCCTT...AGCGCACACTCTGCCTCTGCTGGCAGCTGCGGAAATGAACTGCCTCGTGCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR GCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACACACGGGAGAGAGTGCTaGTCTCCTATCTCTCCCCAT | + |
Preference number: 2 (lower is better) Translates to: DKEKQPRSHQGPASPMLTHGREC*SPISPH Trigger: ATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTG...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR GCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACAGACAGCAATGCCTTCTaGACCACCCACTCGAACACA | + |
Preference number: 2 (lower is better) Translates to: DKEKQPRSHQGPASPMLTDSNAF*TTHSNT Trigger: TGTGTTCGAGTGGGTGGTGCAGAAGGCATTGCTGTC...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | GTCAGCACGAGGCAGTTCATTTCCGCAGCTGCCAGCAGAGGCAGAGTGTGCGCTCTTTGCTTCTCCAGCTaGGACAATACTCACTGTTCC | + |
Preference number: 2 (lower is better) Translates to: VSTRQFISAAASRGRVCALCFSS*DNTHCS Trigger: GGAACAGTGAGTATTGTCCCAGCTGGAGAAGCAAAG...AGCGCACACTCTGCCTCTGCTGGCAGCTGCGGAAATGAACTGCCTCGTGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 90 bp | CCGCTTTTCCCGCAGTCAGCCCTGTCTGACTTGCACTGCTCTTCCTaGCTATTCGAAGAACAAGACTCCCAGGGTTTCGACAAACCAGGG | + |
Preference number: 2 (lower is better) Translates to: PLFPQSALSDLHCSS*LFEEQDSQGFDKPG Trigger: CCCTGGTTTGTCGAAACCCTGGGAGTCTTGTTCTTCGAATAGCAAGGAAGAGCAGTGCAAGTCAGACAGGGCTGACTGCGGGAAAAGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR TCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAAAAGGGGGCAGCCTCTaGCCTCCCAAGTGGTTCTGG | + |
Preference number: 2 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQKGGSL*PPKWFW Trigger: CCAGAACCACTTGGGAGGTCAGAGGCTGCCCCCTTT...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR GCA 90 bp | GTCAGCACGAGGCAGTTCATTTCCGCAGCTGCCAGCAGAGGCAGAGTGTGCGCTCTAGGGCCTGGATTTTaGGCTCATACACAGCTTTTT | + |
Preference number: 2 (lower is better) Translates to: VSTRQFISAAASRGRVCALGPGF*AHTQLF Trigger: AAAAAGCTGTGTATGAGCGCAAAATCCAGGCCCTAG...AGCGCACACTCTGCCTCTGCTGGCAGCTGCGGAAATGAACTGCCTCGTGCTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAGGCCACACACAGGCATaGACTTGGAATATTTACACT | + |
Preference number: 2 (lower is better) Translates to: HGSADHGRECCSPISPHRGHTQA*TWNIYT Trigger: AGTGTAAATATTCCAAGTCCATGCCTGTGTGTGGCC...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACAACCGCACTGCTCAGCTaGACCAAGTCTAAAAGCAAG | + |
Preference number: 2 (lower is better) Translates to: DKEKQPRSHQGPASPMLTTALLS*TKSKSK Trigger: CTTGCTTTTAGACTTGGTCCAGCTGAGCAGTGCGGT...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACACAAGGCTGCAGGACCTaGAAGCAGCTATTCGTTCAT | + |
Preference number: 2 (lower is better) Translates to: DKEKQPRSHQGPASPMLTQGCRT*KQLFVH Trigger: ATGAACGAATAGCTGCTTCCAGGTCCTGCAGCCTTG...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | AGAAAATCACCCAGCCAGTGTTTGAACAAAACCACAAGCTGCTCAAAGGCACAACACTCGAGTGGGCGGTaGAGCAGCGCTCACTGCCGG | + |
Preference number: 2 (lower is better) Translates to: RKSPSQCLNKTTSCSKAQHSSGR*SSAHCR Trigger: CCGGCAGTGAGCGCTGCTCCACCGCCCACTCGAGTG...TTGTGCCTTTGAGCAGCTTGTGGTTTTGTTCAAACACTGGCTGGGTGATTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 90 bp | TGCTCGGAGAGTGCAGATATGACCTTCCCCAAAGTCAGCAAGGACTaGTTAATGCTCACACCTTCCTTCAGTCGCTGCCCACTCGAGTGG | + |
Preference number: 2 (lower is better) Translates to: CSESADMTFPKVSKD*LMLTPSFSRCPLEW Trigger: CCACTCGAGTGGGCAGCGACTGAAGGAAGGTGTGAGCATTAACAAGTCCTTGCTGACTTTGGGGAAGGTCATATCTGCACTCTCCGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 90 bp | TCTAAGGCCTGCTTTGTGGCCAGGGTCTCCATCTCCAGTCGCCTTTaGTTCACGTACACTTCCTGTTCAAGATGCTGCTTCGCCCTTTCC | + |
Preference number: 2 (lower is better) Translates to: SKACFVARVSISSRL*FTYTSCSRCCFALS Trigger: GGAAAGGGCGAAGCAGCATCTTGAACAGGAAGTGTACGTGAACAAAAGGCGACTGGAGATGGAGACCCTGGCCACAAAGCAGGCCTTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR GCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAGACCACGGGAGAGAGTaGTGCTCTCCTATCTCTCCC | + |
Preference number: 2 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQDHGRE*CSPISP Trigger: GGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTC...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR GCA 90 bp | CTAGAGACTCCAGTTCCTCACAGTCAGCACGAGGCAGTTCATTTCCGCAGCTGCTCCTGTTCAAGATGCTaGTTCGCCCTTTCCAACTCC | + |
Preference number: 2 (lower is better) Translates to: LETPVPHSQHEAVHFRSCSCSRC*FALSNS Trigger: GGAGTTGGAAAGGGCGAAGCAGCATCTTGAACAGGA...GCAGCTGCGGAAATGAACTGCCTCGTGCTGACTGTGAGGAACTGGAGTCTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAACGGGGCACTCAGAATaGCCTGGTGACTGCACCTCT | + |
Preference number: 2 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQTGHSE*PGDCTS Trigger: AGAGGTGCAGTCACCAGGCCATTCTGAGTGCCCCGT...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CAA 90 bp | ACACCATCCTGGAGAGCGGCCATGAACTCCTGGGTACTGGAGACTTaGCTGCTGTTTTCCAGAACACAGAGCTTGCTCCCTTTCAGAACA | + |
Preference number: 2 (lower is better) Translates to: TPSWRAAMNSWVLET*LLFSRTQSLLPFRT Trigger: TGTTCTGAAAGGGAGCAAGCTCTGTGTTCTGGAAAACAGCAGCAAAGTCTCCAGTACCCAGGAGTTCATGGCCGCTCTCCAGGATGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR TCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCGTCACCGAGCTCCACTaGATGTACAGGCAGCAGCTA | + |
Preference number: 2 (lower is better) Translates to: YSSETSAQAIALRQMQSSVTELH*MYRQQL Trigger: TAGCTGCTGCCTGTACATTCAGTGGAGCTCGGTGAC...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR TCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAAGCAAGGTGACAGGGTaGGGCCACACCGCACTGCTC | + |
Preference number: 2 (lower is better) Translates to: ISTIHRSTSFALSICLTQSKVTG*GHTALL Trigger: GAGCAGTGCGGTGTGGCCTCACCCTGTCACCTTGCT...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR GCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCAACATCACACAGAGGTaGCCACGGGCCAGCCTAACA | + |
Preference number: 2 (lower is better) Translates to: YSSETSAQAIALRQMQSSNITQR*PRASLT Trigger: TGTTAGGCTGGCCCGTGGGCACCTCTGTGTGATGTT...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR GCA 90 bp | GTCAGCACGAGGCAGTTCATTTCCGCAGCTGCCAGCAGAGGCAGAGTGTGCGCTAGTGGTTGTTTCCTCTaGCCATTTTCACCTTTACAA | + |
Preference number: 2 (lower is better) Translates to: VSTRQFISAAASRGRVCASGCFL*PFSPLQ Trigger: TTGTAAAGGTGAAAATGGGCAGAGGAAACAACCACT...AGCGCACACTCTGCCTCTGCTGGCAGCTGCGGAAATGAACTGCCTCGTGCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAGGGTTAGGAGGCTTGTaGAGGGAAAATTGGGAAGGG | + |
Preference number: 2 (lower is better) Translates to: THGKSLTEPAQVTQAKILGLGGL*RENWEG Trigger: CCCTTCCCAATTTTCCCTCCACAAGCCTCCTAACCC...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAAGCTGGGTTTGGGCTTaGGTTTGGGGGACTGACTGT | + |
Preference number: 2 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQSWVWA*VWGTDC Trigger: ACAGTCAGTCCCCCAAACCCAAGCCCAAACCCAGCT...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAAGCCAACCCAGAGGGTaGGACATTGTTCAGGAGGGA | + |
Preference number: 2 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQSQPRG*DIVQEG Trigger: TCCCTCCTGAACAATGTCCCACCCTCTGGGTTGGCT...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CAA 90 bp | CTGGATGGTAAGAGCCTGTGCCGCCCGGTCAGAGAACAGGTTATCTaGACTTTCTTCATCCTGCTCTTCATGGGCTTTGGAGATGGCAAT | + |
Preference number: 2 (lower is better) Translates to: LDGKSLCRPVREQVI*TFFILLFMGFGDGN Trigger: ATTGCCATCTCCAAAGCCCATGAAGAGCAGGATGAAGAAAGTCAAGATAACCTGTTCTCTGACCGGGCGGCACAGGCTCTTACCATCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR TCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAAAAGGGGGCAGCCTCTaGCCTCCCAAGTGGTTCTGG | + |
Preference number: 2 (lower is better) Translates to: ISTIHRSTSFALSICLTQKGGSL*PPKWFW Trigger: CCAGAACCACTTGGGAGGTCAGAGGCTGCCCCCTTT...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR TCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACATATTGCACAGCAAGGTaGAAACTGCCATTTTGGTAC | + |
Preference number: 2 (lower is better) Translates to: DKEKQPRSHQGPASPMLTYCTAR*KLPFWY Trigger: GTACCAAAATGGCAGTTTTCACCTTGCTGTGCAATA...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR TCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACACGGTTCTGGAGCTCATaGGATTTATTAAAGGCACTT | + |
Preference number: 2 (lower is better) Translates to: DKEKQPRSHQGPASPMLTRFWSS*DLLKAL Trigger: AAGTGCCTTTAATAAATCTCATGAGCTCCAGAACCG...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR TCA 90 bp | GAGACTCCAGTTCCTCACAGTCAGCACGAGGCAGTTCATTTCCGCAGCTGCCAGGAGTTCCAGTTTGGCTaGATGGTGAAAGTTTTATCC | + |
Preference number: 2 (lower is better) Translates to: ETPVPHSQHEAVHFRSCQEFQFG*MVKVLS Trigger: GGATAAAACTTTCACCATTCAGCCAAACTGGAACTC...CTGGCAGCTGCGGAAATGAACTGCCTCGTGCTGACTGTGAGGAACTGGAGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR GCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCGACAGCAATGCCTTCTaGACCACCCACTCGAACACA | + |
Preference number: 2 (lower is better) Translates to: YSSETSAQAIALRQMQSSDSNAF*TTHSNT Trigger: TGTGTTCGAGTGGGTGGTGCAGAAGGCATTGCTGTC...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATACAGGGCACTCAGAATaGCCTGGTCACTCTGCTGCC | + |
Preference number: 2 (lower is better) Translates to: TIHRSTSFALSICLTQWDTGHSE*PGHSAA Trigger: GGCAGCAGAGTGACCAGGCCATTCTGAGTGCCCTGT...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CAA 90 bp | TTCAACATACGGTCCAGAAACAGGGTGCTCCCTCGCGCGCAGTGGTaGTTTCCTCTGCCCATTTTCACCTTTACAAACCAGAAGATCATG | + |
Preference number: 2 (lower is better) Translates to: FNIRSRNRVLPRAQW*FPLPIFTFTNQKIM Trigger: CATGATCTTCTGGTTTGTAAAGGTGAAAATGGGCAGAGGAAACAACCACTGCGCGCGAGGGAGCACCCTGTTTCTGGACCGTATGTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 90 bp | ATTCATGTCCTCGTTGACTTTGGCGATATTGACTATCAGGCGGGCTaGGGTGGCGTATCTGAGTGTGCTCAGCGTTTCCTCTATGTTGCT | + |
Preference number: 2 (lower is better) Translates to: IHVLVDFGDIDYQAG*GGVSECAQRFLYVA Trigger: AGCAACATAGAGGAAACGCTGAGCACACTCAGATACGCCACCCAAGCCCGCCTGATAGTCAATATCGCCAAAGTCAACGAGGACATGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 90 bp | AGCCTCGCTGAGCCAGTACAAGGTAGAAAATCACCCAGCCAGTGTTaGAACAAAACCACAAGCTGCTCAAAGGCACAAGCAACCTGGATG | + |
Preference number: 2 (lower is better) Translates to: SLAEPVQGRKSPSQC*NKTTSCSKAQATWM Trigger: CATCCAGGTTGCTTGTGCCTTTGAGCAGCTTGTGGTTTTGTTCAAACACTGGCTGGGTGATTTTCTACCTTGTACTGGCTCAGCGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR TCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATATGACCGGTACAGAGTaGACCGCAGGAGGAAACCCA | + |
Preference number: 2 (lower is better) Translates to: TIHRSTSFALSICLTQWDMTGTE*TAGGNP Trigger: TGGGTTTCCTCCTGCGGTTCACTCTGTACCGGTCAT...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR TCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATTCGAAAGCGTGCTGGTaGTGTATGGCCCATAAGGGC | + |
Preference number: 2 (lower is better) Translates to: TIHRSTSFALSICLTQWDSKACW*CMAHKG Trigger: GCCCTTATGGGCCATACATCACCAGCACGCTTTCGA...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR TCA 90 bp | CCAGTGTTTGAACAAAACCACAAGCTGCTCAAAGGCACAAGCAACCTGGATGGTCGGAGAGTGCAGATATaGCCTTCCCCAAAGTCAGCA | + |
Preference number: 2 (lower is better) Translates to: PVFEQNHKLLKGTSNLDGRRVQI*PSPKSA Trigger: TGCTGACTTTGGGGAAGGTCATATCTGCACTCTCCG...ACCATCCAGGTTGCTTGTGCCTTTGAGCAGCTTGTGGTTTTGTTCAAACACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR GCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATCACGGGAGAGAGTGCTaGTCTCCTATCTCTCCCCAT | + |
Preference number: 2 (lower is better) Translates to: TIHRSTSFALSICLTQWDHGREC*SPISPH Trigger: ATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTG...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR GCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATCGAGCTCAGAGATCTaGCTGCCTCTGCCTCCTGAG | + |
Preference number: 2 (lower is better) Translates to: ISTIHRSTSFALSICLTQSSSEI*LPLPPE Trigger: CTCAGGAGGCAGAGGCAGGCAGATCTCTGAGCTCGA...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR GCA 90 bp | CTCCTCCTTCTAGAAAGGGAAGAAACTGGTGTGCTTGTAATGTCGGGCTCCCACACTTCCTGTTCAAGATaGTGCTTCGCCCTTTCCAAC | + |
Preference number: 2 (lower is better) Translates to: LLLLEREETGVLVMSGSHTSCSR*CFALSN Trigger: GTTGGAAAGGGCGAAGCAGCATCTTGAACAGGAAGT...GTGGGAGCCCGACATTACAAGCACACCAGTTTCTTCCCTTTCTAGAAGGAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR GCA 90 bp | CTAGAGACTCCAGTTCCTCACAGTCAGCACGAGGCAGTTCATTTCCGCAGCTGCAGCCAATCAATTCTTTaGAAATCCCGGGAAGAAAGG | + |
Preference number: 2 (lower is better) Translates to: LETPVPHSQHEAVHFRSCSQSIL*KSREER Trigger: CCTTTCTTCCCGGGATTTGCAAAGAATTGATTGGCT...GCAGCTGCGGAAATGAACTGCCTCGTGCTGACTGTGAGGAACTGGAGTCTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAACAGGGCACTCAGAATaGCCTGGTCACTCTGCTGCC | + |
Preference number: 2 (lower is better) Translates to: ISTIHRSTSFALSICLTQTGHSE*PGHSAA Trigger: GGCAGCAGAGTGACCAGGCCATTCTGAGTGCCCTGT...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR CCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCACCGCACTGCTCAGCTaGACCAAGTCTAAAAGCAAG | + |
Preference number: 2 (lower is better) Translates to: YSSETSAQAIALRQMQSSTALLS*TKSKSK Trigger: CTTGCTTTTAGACTTGGTCCAGCTGAGCAGTGCGGT...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR CCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATGTTTGGGCTTGGGTTTaGGGGACTGACTGTAACCCC | + |
Preference number: 2 (lower is better) Translates to: TIHRSTSFALSICLTQWDVWAWV*GTDCNP Trigger: GGGGTTACAGTCAGTCCCCCAAACCCAAGCCCAAAC...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR CAA 90 bp | AGTGATCATCGGCAATCAGCACTCCAGACAACTGGATGTCATGGCTaGAGCTTGGTGTGTGCTTTCCAACTGTGGTCACTCCTTCCTTTA | + |
Preference number: 2 (lower is better) Translates to: SDHRQSALQTTGCHG*SLVCAFQLWSLLPL Trigger: TAAAGGAAGGAGTGACCACAGTTGGAAAGCACACACCAAGCTCAAGCCATGACATCCAGTTGTCTGGAGTGCTGATTGCCGATGATCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR TCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCCTGCACGAGGAAAAGTaGCACCAAGTGTCCTTTTTG | + |
Preference number: 2 (lower is better) Translates to: YSSETSAQAIALRQMQSSLHEEK*HQVSFL Trigger: CAAAAAGGACACTTGGTGTCACTTTTCCTCGTGCAG...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR GCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAAACATCACACAGAGGTaGCCACGGGCCAGCCTAACA | + |
Preference number: 2 (lower is better) Translates to: ISTIHRSTSFALSICLTQNITQR*PRASLT Trigger: TGTTAGGCTGGCCCGTGGGCACCTCTGTGTGATGTT...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR GCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATCGGATAAGACAAGGCTaGAGGACCTGGAAGCAGCTA | + |
Preference number: 2 (lower is better) Translates to: TIHRSTSFALSICLTQWDRIRQG*RTWKQL Trigger: TAGCTGCTTCCAGGTCCTGCAGCCTTGTCTTATCCG...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR GCA 90 bp | CTGAACAGCCTGCTGTATAATCTTCATGACTTTGTTTTGAGCCTCTTTAACCATTGGAGCAGCGCTCACTaGCGGCCAGGTCCACAAGGT | + |
Preference number: 2 (lower is better) Translates to: LNSLLYNLHDFVLSLFNHWSSAH*RPGPQG Trigger: ACCTTGTGGACCTGGCCGGCAGTGAGCGCTGCTCCA...ATGGTTAAAGAGGCTCAAAACAAAGTCATGAAGATTATACAGCAGGCTGTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR GCA 90 bp | GGCTTGAGCTTGGTGTGTGCTTTCCAACTGTGGTCACTCCTTCCTTTACCATGTTACTCTCTGAATCTCTaGCATGTCTCTCTCCTGCTG | + |
Preference number: 2 (lower is better) Translates to: GLSLVCAFQLWSLLPLPCYSLNL*HVSLLL Trigger: CAGCAGGAGAGAGACATGGCAGAGATTCAGAGAGTA...ACATGGTAAAGGAAGGAGTGACCACAGTTGGAAAGCACACACCAAGCTCAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR CCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAGTTTGGGCTTGGGTTTaGGGGACTGACTGTAACCCC | + |
Preference number: 2 (lower is better) Translates to: ISTIHRSTSFALSICLTQVWAWV*GTDCNP Trigger: GGGGTTACAGTCAGTCCCCCAAACCCAAGCCCAAAC...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR CCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCAAGATAGACACTAGCTaGGTTTGGGCTTGGGTTTGG | + |
Preference number: 2 (lower is better) Translates to: YSSETSAQAIALRQMQSSKIDTS*VWAWVW Trigger: CCAAACCCAAGCCCAAACCCAGCTAGTGTCTATCTT...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR CCA 90 bp | GCCTCAAGCCGAGACCTCTGTGCTGTAAGTAACTCATTTTTGGCAAACTCAAAACCACCACCTCTGTCTTaGTCTGTGTCATCACCAGGG | + |
Preference number: 2 (lower is better) Translates to: ASSRDLCAVSNSFLANSKPPPLS*SVSSPG Trigger: CCCTGGTGATGACACAGACCAAGACAGAGGTGGTGG...TTTTGAGTTTGCCAAAAATGAGTTACTTACAGCACAGAGGTCTCGGCTTGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR CCA 90 bp | ACTTTTCCAGGCTCCAGAAAGTTGAGATCCCAAGCTGGAGGTTACGAACTCGAAGACAACTGGATGTCATaGCTTGAGCTTGGTGTGTGC | + |
Preference number: 2 (lower is better) Translates to: TFPGSRKLRSQAGGYELEDNWMS*LELGVC Trigger: GCACACACCAAGCTCAAGCCATGACATCCAGTTGTC...TTCGAGTTCGTAACCTCCAGCTTGGGATCTCAACTTTCTGGAGCCTGGAAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR CAA 90 bp | GCTTTCAACTCTCTGATCAACTTTGCATTCATGTCCTCGTTGACTTaGGCGATATTGACTATCAGGCGGGCTTGGGTGGCGTATCTGAGT | + |
Preference number: 2 (lower is better) Translates to: AFNSLINFAFMSSLT*AILTIRRAWVAYLS Trigger: ACTCAGATACGCCACCCAAGCCCGCCTGATAGTCAATATCGCCAAAGTCAACGAGGACATGAATGCAAAGTTGATCAGAGAGTTGAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR CAA 90 bp | GTAACACTGTGGGCTCCGAGATGTGCGTCCCGTTTACATATGTCTTaGCTTCTCCAGCTGGGACAATACTCACTGTTCCTCCAAAATTTC | + |
Preference number: 2 (lower is better) Translates to: VTLWAPRCASRLHMS*LLQLGQYSLFLQNF Trigger: GAAATTTTGGAGGAACAGTGAGTATTGTCCCAGCTGGAGAAGCAAAGACATATGTAAACGGGACGCACATCTCGGAGCCCACAGTGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR TCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCACTGCACGAGGAAAAGTaGCACCAAGTGTCCTTTTTG | + |
Preference number: 2 (lower is better) Translates to: LSKFKEAQRSGRILPRTSLHEEK*HQVSFL Trigger: CAAAAAGGACACTTGGTGTCACTTTTCCTCGTGCAG...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATGTGCCTCATTTAAGGTaGTGTAGTTACTCACCGGCC | + |
Preference number: 2 (lower is better) Translates to: TIHRSTSFALSICLTQWDVPHLR*CSYSPA Trigger: GGCCGGTGAGTAACTACACCACCTTAAATGAGGCAC...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | TTGATGAGCCAATCAATTCTTTGCAAATCCCGGGAAGAAAGGACTCTGATGAATCGGCTCGTGATCCTGTaGTCATGTTCCTCTCCCTCC | + |
Preference number: 2 (lower is better) Translates to: LMSQSILCKSREERTLMNRLVIL*SCSSPS Trigger: GGAGGGAGAGGAACATGACCACAGGATCACGAGCCG...ATTCATCAGAGTCCTTTCTTCCCGGGATTTGCAAAGAATTGATTGGCTCATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 90 bp | GGCCTGGATTTTGCGCTCATACACAGCTTTTTGGGAAGAAAGTTCTaGCTGGGCCATCTCCTTTGCGATCTGAATTCCTTGCATCATTTC | + |
Preference number: 2 (lower is better) Translates to: GLDFALIHSFLGRKF*LGHLLCDLNSLHHF Trigger: GAAATGATGCAAGGAATTCAGATCGCAAAGGAGATGGCCCAGCAAGAACTTTCTTCCCAAAAAGCTGTGTATGAGCGCAAAATCCAGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR TCA 90 bp | GACTTTCTTCATCCTGCTCTTCATGGGCTTTGGAGATGGCAATCACCCCATTATTCCTTCCATACTCTCTaGATCTCTGCCATGTCTCTC | + |
Preference number: 2 (lower is better) Translates to: DFLHPALHGLWRWQSPHYSFHTL*ISAMSL Trigger: GAGAGACATGGCAGAGATTCAGAGAGTATGGAAGGA...ATAATGGGGTGATTGCCATCTCCAAAGCCCATGAAGAGCAGGATGAAGAAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR TCA 90 bp | ATGAAATATCCGAACAGCATCCCTGCAAAAACAATTGCAAATAGCCTCCGAGTTACCACCCGATCACCATaGTGTAACACTGTGGGCTCC | + |
Preference number: 2 (lower is better) Translates to: MKYPNSIPAKTIANSLRVTTRSP*CNTVGS Trigger: GGAGCCCACAGTGTTACATCATGGTGATCGGGTGGT...AACTCGGAGGCTATTTGCAATTGTTTTTGCAGGGATGCTGTTCGGATATTTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR GCA 90 bp | GACTTTCTTCATCCTGCTCTTCATGGGCTTTGGAGATGGCAATCACCCCATTATCTTGAGCTTGGTGTGTaGTTTCCAACTGTGGTCACT | + |
Preference number: 2 (lower is better) Translates to: DFLHPALHGLWRWQSPHYLELGV*FPTVVT Trigger: AGTGACCACAGTTGGAAAGCACACACCAAGCTCAAG...ATAATGGGGTGATTGCCATCTCCAAAGCCCATGAAGAGCAGGATGAAGAAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR GCA 90 bp | ATGAAATATCCGAACAGCATCCCTGCAAAAACAATTGCAAATAGCCTCCGAGTTTGGTCTTCTAAGGCCTaGTTTGTGGCCAGGGTCTCC | + |
Preference number: 2 (lower is better) Translates to: MKYPNSIPAKTIANSLRVWSSKA*FVARVS Trigger: GGAGACCCTGGCCACAAAGCAGGCCTTAGAAGACCA...AACTCGGAGGCTATTTGCAATTGTTTTTGCAGGGATGCTGTTCGGATATTTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCAGGCCACACACAGGCATaGACTTGGAATATTTACACT | + |
Preference number: 2 (lower is better) Translates to: LSKFKEAQRSGRILPRTSGHTQA*TWNIYT Trigger: AGTGTAAATATTCCAAGTCCATGCCTGTGTGTGGCC...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAATGAAGCAACCACTGTaGAACACAGAAAACACAGTA | + |
Preference number: 2 (lower is better) Translates to: THGKSLTEPAQVTQAKILMKQPL*NTENTV Trigger: TACTGTGTTTTCTGTGTTCCACAGTGGTTGCTTCAT...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAACCTCCCAAGTGGTTCTaGTTACATTTCACTACTACT | + |
Preference number: 2 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQPPKWF*LHFTTT Trigger: AGTAGTAGTGAAATGTAACCAGAACCACTTGGGAGG...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATAAGATAGACACTAGCTaGGTTTGGGCTTGGGTTTGG | + |
Preference number: 2 (lower is better) Translates to: TIHRSTSFALSICLTQWDKIDTS*VWAWVW Trigger: CCAAACCCAAGCCCAAACCCAGCTAGTGTCTATCTT...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCTTCCAAGCAGAGAACTaGGAAATAAGGCTGATCCAT | + |
Preference number: 2 (lower is better) Translates to: YSSETSAQAIALRQMQSSFQAEN*EIRLIH Trigger: ATGGATCAGCCTTATTTCCCAGTTCTCTGCTTGGAA...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAGTGCCTCATTTAAGGTaGTGTAGTTACTCACCGGCC | + |
Preference number: 2 (lower is better) Translates to: ISTIHRSTSFALSICLTQVPHLR*CSYSPA Trigger: GGCCGGTGAGTAACTACACCACCTTAAATGAGGCAC...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | ATGGACGGTCTCCAAGTGCACAATGGTTTCATACCCACTGAATCCTATTCGGGGGAGATTGACAAGGTTTaGCAAGTGGTTGTCCATTTG | + |
Preference number: 2 (lower is better) Translates to: MDGLQVHNGFIPTESYSGEIDKV*QVVVHL Trigger: CAAATGGACAACCACTTGCCAAACCTTGTCAATCTC...CCCCGAATAGGATTCAGTGGGTATGAAACCATTGTGCACTTGGAGACCGTCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CCA 90 bp | ATGAAATATCCGAACAGCATCCCTGCAAAAACAATTGCAAATAGCCTCCGAGTTCTAAGGCCTGCTTTGTaGCCAGGGTCTCCATCTCCA | + |
Preference number: 2 (lower is better) Translates to: MKYPNSIPAKTIANSLRVLRPAL*PGSPSP Trigger: TGGAGATGGAGACCCTGGCCACAAAGCAGGCCTTAG...AACTCGGAGGCTATTTGCAATTGTTTTTGCAGGGATGCTGTTCGGATATTTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 90 bp | CCATTCATAGCCACATCAATCCAGCCTGAGATCTGCTTTACTTTCTaGACCCGAACTCCTAGATATCCACAATTCACAGATCGACCAGCT | + |
Preference number: 2 (lower is better) Translates to: PFIATSIQPEICFTF*TRTPRYPQFTDRPA Trigger: AGCTGGTCGATCTGTGAATTGTGGATATCTAGGAGTTCGGGTCAAGAAAGTAAAGCAGATCTCAGGCTGGATTGATGTGGCTATGAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CAA 90 bp | ATTTCTGCTTTCAACTCTCTGATCAACTTTGCATTCATGTCCTCGTaGACTTTGGCGATATTGACTATCAGGCGGGCTTGGGTGGCGTAT | + |
Preference number: 2 (lower is better) Translates to: ISAFNSLINFAFMSS*TLAILTIRRAWVAY Trigger: ATACGCCACCCAAGCCCGCCTGATAGTCAATATCGCCAAAGTCAACGAGGACATGAATGCAAAGTTGATCAGAGAGTTGAAAGCAGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 90 bp | GGAAGAAAGTTCTTGCTGGGCCATCTCCTTTGCGATCTGAATTCCTaGCATCATTTCTTCCTTCGCCTTCAGCTGCGCATCTTTAATTTC | + |
Preference number: 2 (lower is better) Translates to: GRKFLLGHLLCDLNS*HHFFLRLQLRIFNF Trigger: GAAATTAAAGATGCGCAGCTGAAGGCGAAGGAAGAAATGATGCAAGGAATTCAGATCGCAAAGGAGATGGCCCAGCAAGAACTTTCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR TCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCAGACTTGATTGTAGATaGAGGGTTCTTAAGGCTATG | + |
Preference number: 2 (lower is better) Translates to: YSSETSAQAIALRQMQSSRLDCR*RVLKAM Trigger: CATAGCCTTAAGAACCCTTCATCTACAATCAAGTCT...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR TCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATTTTCCTTCTGCAGATaGGGAACCAGGAAGGAAGCA | + |
Preference number: 2 (lower is better) Translates to: ISTIHRSTSFALSICLTQFSFCR*GTRKEA Trigger: TGCTTCCTTCCTGGTTCCTCATCTGCAGAAGGAAAA...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR TCA 90 bp | ATGGACGGTCTCCAAGTGCACAATGGTTTCATACCCACTGAATCCTATTCGGGGAGTTTGGCTGAATGGTaGAAGTTTTATCCCTGTTTC | + |
Preference number: 2 (lower is better) Translates to: MDGLQVHNGFIPTESYSGSLAEW*KFYPCF Trigger: GAAACAGGGATAAAACTTTCACCATTCAGCCAAACT...CCCCGAATAGGATTCAGTGGGTATGAAACCATTGTGCACTTGGAGACCGTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCATGAAGCAACCACTGTaGAACACAGAAAACACAGTA | + |
Preference number: 2 (lower is better) Translates to: YSSETSAQAIALRQMQSSMKQPL*NTENTV Trigger: TACTGTGTTTTCTGTGTTCCACAGTGGTTGCTTCAT...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCACGGACTGTGAACACTaGAATTCACTCATCCTTATA | + |
Preference number: 2 (lower is better) Translates to: YSSETSAQAIALRQMQSSTDCEH*NSLILI Trigger: TATAAGGATGAGTGAATTCCAGTGTTCACAGTCCGT...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR TCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATCGGTTCTGGAGCTCATaGGATTTATTAAAGGCACTT | + |
Preference number: 2 (lower is better) Translates to: TIHRSTSFALSICLTQWDRFWSS*DLLKAL Trigger: AAGTGCCTTTAATAAATCTCATGAGCTCCAGAACCG...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR GCA 90 bp | ATGAAATATCCGAACAGCATCCCTGCAAAAACAATTGCAAATAGCCTCCGAGTTTGCTTGCTCGGAGAGTaGAGATATGACCTTCCCCAA | + |
Preference number: 2 (lower is better) Translates to: MKYPNSIPAKTIANSLRVCLLGE*RYDLPQ Trigger: TTGGGGAAGGTCATATCTGCACTCTCCGAGCAAGCA...AACTCGGAGGCTATTTGCAATTGTTTTTGCAGGGATGCTGTTCGGATATTTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATCCTCCCAAGTGGTTCTaGTTACATTTCACTACTACT | + |
Preference number: 2 (lower is better) Translates to: TIHRSTSFALSICLTQWDPPKWF*LHFTTT Trigger: AGTAGTAGTGAAATGTAACCAGAACCACTTGGGAGG...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | CCTGTCACCACCGTTACTCTCATAAAGCTCTTTCATTGCTGCAAGTTTAGATTCAGCACTCCAGACAACTaGATGTCATGGCTTGAGCTT | + |
Preference number: 2 (lower is better) Translates to: PVTTVTLIKLFHCCKFRFSTPDN*MSWLEL Trigger: AAGCTCAAGCCATGACATCCAGTTGTCTGGAGTGCT...GAATCTAAACTTGCAGCAATGAAAGAGCTTTATGAGAGTAACGGTGGTGACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CCA 90 bp | ACTTTTCCAGGCTCCAGAAAGTTGAGATCCCAAGCTGGAGGTTACGAACTCGAACATGGAGTTCCAGTTTaGCTGAATGGTGAAAGTTTT | + |
Preference number: 2 (lower is better) Translates to: TFPGSRKLRSQAGGYELEHGVPV*LNGESF Trigger: AAAACTTTCACCATTCAGCCAAACTGGAACTCCATG...TTCGAGTTCGTAACCTCCAGCTTGGGATCTCAACTTTCTGGAGCCTGGAAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR TCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATAGGTATGATCTTATTTaGGACAGGGTTTCTCTGTGT | + |
Preference number: 2 (lower is better) Translates to: TIHRSTSFALSICLTQWDRYDLI*DRVSLC Trigger: ACACAGAGAAACCCTGTCTCAAATAAGATCATACCT...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR TCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATAAGAGCAGAGAACAATaGATTAATGCAAGCACGGTA | + |
Preference number: 2 (lower is better) Translates to: TIHRSTSFALSICLTQWDKSREQ*INASTV Trigger: TACCGTGCTTGCATTAATTCATTGTTCTCTGCTCTT...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR TCA 90 bp | AGAAAATCACCCAGCCAGTGTTTGAACAAAACCACAAGCTGCTCAAAGGCACAAAATCATGGCTGTTTTTaGATTTCCACCCAGGCTTTC | + |
Preference number: 2 (lower is better) Translates to: RKSPSQCLNKTTSCSKAQNHGCF*ISTQAF Trigger: GAAAGCCTGGGTGGAAATTCAAAAACAGCCATGATT...TTGTGCCTTTGAGCAGCTTGTGGTTTTGTTCAAACACTGGCTGGGTGATTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAACAAACAGTTGATTCTTaGACAAAGAGCTGTAGTTTT | + |
Preference number: 2 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQQTVDS*TKSCSF Trigger: AAAACTACAGCTCTTTGTCCAAGAATCAACTGTTTG...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CCA 90 bp | TTTCCATTAATCCAGATGAGTGTGAAGACTGCATGCTCTGAATCGGATGGATGTCTTCCTGAATCATCGTaGAGAGTTTCATGGAGTTCC | + |
Preference number: 2 (lower is better) Translates to: FPLIQMSVKTACSESDGCLPESS*RVSWSS Trigger: GGAACTCCATGAAACTCTCCACGATGATTCAGGAAG...ACATCCATCCGATTCAGAGCATGCAGTCTTCACACTCATCTGGATTAATGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 90 bp | CTTCAGCGATCTTTTGCTTTTCAATTTCTAAAGCTTCTAAGATCCTaGCATGTCGGATTCTATGGTCTTCTAAGGCCTGCTTTGTGGCCA | + |
Preference number: 2 (lower is better) Translates to: LQRSFAFQFLKLLRS*HVGFYGLLRPALWP Trigger: TGGCCACAAAGCAGGCCTTAGAAGACCATAGAATCCGACATGCAAGGATCTTAGAAGCTTTAGAAATTGAAAAGCAAAAGATCGCTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR GCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATATGTAACAAGGTTTTaGTGCTCGTTACAGAAGGGA | + |
Preference number: 2 (lower is better) Translates to: ISTIHRSTSFALSICLTQYVTRF*CSLQKG Trigger: TCCCTTCTGTAACGAGCAGCAAAACCTTGTTACATA...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR GCA 90 bp | CCTGTCACCACCGTTACTCTCATAAAGCTCTTTCATTGCTGCAAGTTTAGATTCGTTTACATATGTCTTTaGTTCTCCAGCTGGGACAAT | + |
Preference number: 2 (lower is better) Translates to: PVTTVTLIKLFHCCKFRFVYICL*FSSWDN Trigger: ATTGTCCCAGCTGGAGAAGCAAAGACATATGTAAAC...GAATCTAAACTTGCAGCAATGAAAGAGCTTTATGAGAGTAACGGTGGTGACAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATTTATATCAGTTACTGTaGAAACCAGTGTTGGTAGAT | + |
Preference number: 2 (lower is better) Translates to: TIHRSTSFALSICLTQWDLYQLL*KPVLVD Trigger: ATCTACCAACACTGGTTTCCACAGTAACTGATATAA...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR TCA 90 bp | TTGATGAGCCAATCAATTCTTTGCAAATCCCGGGAAGAAAGGACTCTGATGAATCTGCTTTCAACTCTCTaGTCAACTTTGCATTCATGT | + |
Preference number: 2 (lower is better) Translates to: LMSQSILCKSREERTLMNLLSTL*STLHSC Trigger: ACATGAATGCAAAGTTGATCAGAGAGTTGAAAGCAG...ATTCATCAGAGTCCTTTCTTCCCGGGATTTGCAAAGAATTGATTGGCTCATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR TCA 90 bp | TACATATGTCTTTGCTTCTCCAGCTGGGACAATACTCACTGTTCCTCCAAAATTAAGTGGTTGTCCATTTaGAATGTAACTCCTGCTTTC | + |
Preference number: 2 (lower is better) Translates to: YICLCFSSWDNTHCSSKIKWLSI*NVTPAF Trigger: GAAAGCAGGAGTTACATTTCAAATGGACAACCACTT...AATTTTGGAGGAACAGTGAGTATTGTCCCAGCTGGAGAAGCAAAGACATATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 72 bp | ATGCTCACACCTTCCTTCAGTCGCTGCCCACTCGAGTaGGCGGTGGAGCAGCGCTCACTGCCGGCCAGGTCC | + |
Preference number: 3 (lower is better) Translates to: MLTPSFSRCPLE*AVEQRSLPARS Trigger: GGACCTGGCCGGCAGTGAGCGCTGCTCCACCGCCCACTCGAGTGGGCAGCGACTGAAGGAAGGTGTGAGCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 72 bp | GTGACCTCCTCTCGTGCACTCTGCCTGGAGAGGTCCTaGCTGAGGTCTTGCGCGGTCTCCAGCCCAGAGTCT | + |
Preference number: 3 (lower is better) Translates to: VTSSRALCLERS*LRSCAVSSPES Trigger: AGACTCTGGGCTGGAGACCGCGCAAGACCTCAGGCAGGACCTCTCCAGGCAGAGTGCACGAGAGGAGGTCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 72 bp | CCAATGAACCAGCTAGACAGCACCAGGGTGGTGAAGTaGGAGTGGGTGGGTGGGTGGGTGGGGGAGCACCCT | + |
Preference number: 3 (lower is better) Translates to: PMNQLDSTRVVK*EWVGGWVGEHP Trigger: AGGGTGCTCCCCCACCCACCCACCCACCCACTCCCACTTCACCACCCTGGTGCTGTCTAGCTGGTTCATTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR TCA 72 bp | CCTCCTCTCGTGCACTCTGCCTGGAGAGGTCCTGCCTaGGGTCTTGCGCGGTCTCCAGCCCAGAGTCTAAGA | + |
Preference number: 3 (lower is better) Translates to: PPLVHSAWRGPA*GLARSPAQSLR Trigger: TCTTAGACTCTGGGCTGGAGACCGCGCAAGACCTCAGGCAGGACCTCTCCAGGCAGAGTGCACGAGAGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 72 bp | CGTGCACTCTGCCTGGAGAGGTCCTGCCTGAGGTCTTaGGCGGTCTCCAGCCCAGAGTCTAAGAGACTCTTC | + |
Preference number: 3 (lower is better) Translates to: RALCLERSCLRS*AVSSPESKRLF Trigger: GAAGAGTCTCTTAGACTCTGGGCTGGAGACCGCGCAAGACCTCAGGCAGGACCTCTCCAGGCAGAGTGCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR TCA 72 bp | CAGCATTCAGGAGGCAAAGGCAGCAAGGTGACAGGGTaGGGCCACACCGCACTGCTCAGCTGGACCAAGTCT | + |
Preference number: 3 (lower is better) Translates to: QHSGGKGSKVTG*GHTALLSWTKS Trigger: AGACTTGGTCCAGCTGAGCAGTGCGGTGTGGCCTCACCCTGTCACCTTGCTGCCTTTGCCTCCTGAATGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR TCA 72 bp | CATTTCCGCAGCTGCCAGCAGAGGCAGAGTGTGCGCTaGAGTCACTGTGAAGCTTGCGAGCCAGGCTGCAGA | + |
Preference number: 3 (lower is better) Translates to: HFRSCQQRQSVR*SHCEACEPGCR Trigger: TCTGCAGCCTGGCTCGCAAGCTTCACAGTGACTTCAGCGCACACTCTGCCTCTGCTGGCAGCTGCGGAAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 72 bp | TCCGACAGGACGGGGCACTCAGAATGGCCTGGTGACTaGACCTCTTCAAAGCTCCTGGAGGCACAAGGGATG | + |
Preference number: 3 (lower is better) Translates to: SDRTGHSEWPGD*TSSKLLEAQGM Trigger: CATCCCTTGTGCCTCCAGGAGCTTTGAAGAGGTGCAGTCACCAGGCCATTCTGAGTGCCCCGTCCTGTCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR GCA 72 bp | GCTTTCATCTGCTTAGTGACCTCCTCTCGTGCACTCTaGCTGGAGAGGTCCTGCCTGAGGTCTTGCGCGGTC | + |
Preference number: 3 (lower is better) Translates to: AFICLVTSSRAL*LERSCLRSCAV Trigger: GACCGCGCAAGACCTCAGGCAGGACCTCTCCAGGCAGAGTGCACGAGAGGAGGTCACTAAGCAGATGAAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 72 bp | CAGTTCATTTCCGCAGCTGCCAGCAGAGGCAGAGTGTaGGCTGAAGTCACTGTGAAGCTTGCGAGCCAGGCT | + |
Preference number: 3 (lower is better) Translates to: QFISAAASRGRV*AEVTVKLASQA Trigger: AGCCTGGCTCGCAAGCTTCACAGTGACTTCAGCGCACACTCTGCCTCTGCTGGCAGCTGCGGAAATGAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CAA 90 bp | CTAGAGACTCCAGTTCCTCACAGTCAGCACGAGGCAGTTCATTTCCGCAGCTGCAGCGTTTCCTCTATGTaGCTGGCAGCGGGACTGACG | + |
Preference number: 3 (lower is better) Translates to: LETPVPHSQHEAVHFRSCSVSSM*LAAGLT Trigger: CGTCAGTCCCGCTGCCAGCAACATAGAGGAAACGCT...GCAGCTGCGGAAATGAACTGCCTCGTGCTGACTGTGAGGAACTGGAGTCTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 72 bp | ACCGGGAGCTTTTATCGTTCATGCCGGTGGCCGCCGTaGCTCTCTGTTTATTTCCCAGTTCCAGCCAGCTCT | + |
Preference number: 3 (lower is better) Translates to: TGSFYRSCRWPP*LSVYFPVPASS Trigger: AGAGCTGGCTGGAACTGGGAAATAAACAGAGAGCCACGGCGGCCACCGGCATGAACGATAAAAGCTCCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CAA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACAGAGGGGTTAGGAGGCTaGTGGAGGGAAAATTGGGAA | + |
Preference number: 3 (lower is better) Translates to: DKEKQPRSHQGPASPMLTEGLGG*WRENWE Trigger: TTCCCAATTTTCCCTCCACAAGCCTCCTAACCCCTC...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR TCA 72 bp | GCGTCTTGGCCCGCTTTTCCCGCAGTCAGCCCTGTCTaGCTTGCACTGCTCTTCCTTGCTATTCGAAGAACA | + |
Preference number: 3 (lower is better) Translates to: ASWPAFPAVSPV*LALLFLAIRRT Trigger: TGTTCTTCGAATAGCAAGGAAGAGCAGTGCAAGTCAGACAGGGCTGACTGCGGGAAAAGCGGGCCAAGACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 72 bp | AGTACTGGCTTTCATCTGCTTAGTGACCTCCTCTCGTaGACTCTGCCTGGAGAGGTCCTGCCTGAGGTCTTG | + |
Preference number: 3 (lower is better) Translates to: STGFHLLSDLLS*TLPGEVLPEVL Trigger: CAAGACCTCAGGCAGGACCTCTCCAGGCAGAGTGCACGAGAGGAGGTCACTAAGCAGATGAAAGCCAGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 72 bp | CAGAAGGGAGACTACCATTGGCTTATCATCTGCTACTaGGCAAGCGCCCTCCTTCCTCTCTGTCACCCAGTG | + |
Preference number: 3 (lower is better) Translates to: QKGDYHWLIICY*ASALLPLCHPV Trigger: CACTGGGTGACAGAGAGGAAGGAGGGCGCTTGCCCAGTAGCAGATGATAAGCCAATGGTAGTCTCCCTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CAA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAATCCATATGCTATATTaGGGGGAGAGAATGCACAGG | + |
Preference number: 3 (lower is better) Translates to: HGSADHGRECCSPISPHRIHMLY*GERMHR Trigger: CCTGTGCATTCTCTCCCCCAAATATAGCATATGGAT...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CAA 90 bp | TGCTTTGTGGCCAGGGTCTCCATCTCCAGTCGCCTTTTGTTCACGTACACTTCCTCCACCACCTCTGTCTaGGTCTGTGTCATCACCAGG | + |
Preference number: 3 (lower is better) Translates to: CFVARVSISSRLLFTYTSSTTSV*VCVITR Trigger: CCTGGTGATGACACAGACCAAGACAGAGGTGGTGGA...GGAAGTGTACGTGAACAAAAGGCGACTGGAGATGGAGACCCTGGCCACAAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CAA 90 bp | ATCTGCTTAGTGACCTCCTCTCGTGCACTCTGCCTGGAGAGGTCCTGCCTGAGGAGCTGTGGGTCTTCATaGAGATTGACAAGGTTTGGC | + |
Preference number: 3 (lower is better) Translates to: ICLVTSSRALCLERSCLRSCGSS*RLTRFG Trigger: GCCAAACCTTGTCAATCTCAATGAAGACCCACAGCT...CCTCAGGCAGGACCTCTCCAGGCAGAGTGCACGAGAGGAGGTCACTAAGCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CAA 90 bp | GAGACTCCAGTTCCTCACAGTCAGCACGAGGCAGTTCATTTCCGCAGCTGCCAGTTGGGAAGAAAGTTCTaGCTGGGCCATCTCCTTTGC | + |
Preference number: 3 (lower is better) Translates to: ETPVPHSQHEAVHFRSCQLGRKF*LGHLLC Trigger: GCAAAGGAGATGGCCCAGCAAGAACTTTCTTCCCAA...CTGGCAGCTGCGGAAATGAACTGCCTCGTGCTGACTGTGAGGAACTGGAGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CAA 90 bp | ATCTGCTTAGTGACCTCCTCTCGTGCACTCTGCCTGGAGAGGTCCTGCCTGAGGTGGGTACTGGAGACTTaGCTGCTGTTTTCCAGAACA | + |
Preference number: 3 (lower is better) Translates to: ICLVTSSRALCLERSCLRWVLET*LLFSRT Trigger: TGTTCTGGAAAACAGCAGCAAAGTCTCCAGTACCCA...CCTCAGGCAGGACCTCTCCAGGCAGAGTGCACGAGAGGAGGTCACTAAGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR TCA 72 bp | GGACGGTCTCCAAGTGCACAATGGTTTCATACCCACTaGATCCTATTCGGGGTGCAGTCCCCAGAGGACACT | + |
Preference number: 3 (lower is better) Translates to: GRSPSAQWFHTH*ILFGVQSPEDT Trigger: AGTGTCCTCTGGGGACTGCACCCCGAATAGGATTCAGTGGGTATGAAACCATTGTGCACTTGGAGACCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 72 bp | TTCGACAAATGCAGTCAAGCCAACATCACACAGAGGTaGCCACGGGCCAGCCTAACACAGACAATCCCTCAG | + |
Preference number: 3 (lower is better) Translates to: FDKCSQANITQR*PRASLTQTIPQ Trigger: CTGAGGGATTGTCTGTGTTAGGCTGGCCCGTGGGCACCTCTGTGTGATGTTGGCTTGACTGCATTTGTCGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR GCA 72 bp | AGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATaGTTACAGGCAAGAAGGCAGCTGTTTACATACAAA | + |
Preference number: 3 (lower is better) Translates to: SNLGPTRAQQAP*LQARRQLFTYK Trigger: TTTGTATGTAAACAGCTGCCTTCTTGCCTGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CCA 72 bp | CAGAATGAGACCGGGAGCTTTTATCGTTCATGCCGGTaGCCGCCGTGGCTCTCTGTTTATTTCCCAGTTCCA | + |
Preference number: 3 (lower is better) Translates to: QNETGSFYRSCR*PPWLSVYFPVP Trigger: TGGAACTGGGAAATAAACAGAGAGCCACGGCGGCCACCGGCATGAACGATAAAAGCTCCCGGTCTCATTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 72 bp | AACAAAACCACAAGCTGCTCAAAGGCACAAGCAACCTaGATGGTAAGAGCCTGTGCCGCCCGGTCAGAGAAC | + |
Preference number: 3 (lower is better) Translates to: NKTTSCSKAQAT*MVRACAARSEN Trigger: GTTCTCTGACCGGGCGGCACAGGCTCTTACCATCCAGGTTGCTTGTGCCTTTGAGCAGCTTGTGGTTTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CAA 90 bp | GTCAGCACGAGGCAGTTCATTTCCGCAGCTGCCAGCAGAGGCAGAGTGTGCGCTAACTCACAACATTCATaGACAGGCCTTCAACATACG | + |
Preference number: 3 (lower is better) Translates to: VSTRQFISAAASRGRVCANSQHS*TGLQHT Trigger: CGTATGTTGAAGGCCTGTCAATGAATGTTGTGAGTT...AGCGCACACTCTGCCTCTGCTGGCAGCTGCGGAAATGAACTGCCTCGTGCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CAA 90 bp | CTAGAGACTCCAGTTCCTCACAGTCAGCACGAGGCAGTTCATTTCCGCAGCTGCGGGTCAATGTTCCGATaGCTTCTCTGGGCAGCTTTT | + |
Preference number: 3 (lower is better) Translates to: LETPVPHSQHEAVHFRSCGSMFR*LLWAAF Trigger: AAAAGCTGCCCAGAGAAGCAATCGGAACATTGACCC...GCAGCTGCGGAAATGAACTGCCTCGTGCTGACTGTGAGGAACTGGAGTCTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CAA 90 bp | CTAGAGACTCCAGTTCCTCACAGTCAGCACGAGGCAGTTCATTTCCGCAGCTGCACTGGATGTCATGGCTaGAGCTTGGTGTGTGCTTTC | + |
Preference number: 3 (lower is better) Translates to: LETPVPHSQHEAVHFRSCTGCHG*SLVCAF Trigger: GAAAGCACACACCAAGCTCAAGCCATGACATCCAGT...GCAGCTGCGGAAATGAACTGCCTCGTGCTGACTGTGAGGAACTGGAGTCTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR TCA 72 bp | AACAGGTATCTTCAAGCCAGTGTCACCGAGCTCCACTaGATGTACAGGCAGCAGCTACAGCCAAAAGCAGGC | + |
Preference number: 3 (lower is better) Translates to: NRYLQASVTELH*MYRQQLQPKAG Trigger: GCCTGCTTTTGGCTGTAGCTGCTGCCTGTACATTCAGTGGAGCTCGGTGACACTGGCTTGAAGATACCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR TCA 72 bp | TCCTCTCTGTCACCCAGTGCCCACGGACATAGTCCATaGAGTGGTGGGACTTTTCCTTCTGCAGATGAGGAA | + |
Preference number: 3 (lower is better) Translates to: SSLSPSAHGHSP*SGGTFPSADEE Trigger: TTCCTCATCTGCAGAAGGAAAAGTCCCACCACTTCATGGACTATGTCCGTGGGCACTGGGTGACAGAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR TCA 72 bp | TGGATCGTTGCATTGGTCCTCTCGAAAGCGTGCTGGTaGTGTATGGCCCATAAGGGCACCAACTGGGAAAGA | + |
Preference number: 3 (lower is better) Translates to: WIVALVLSKACW*CMAHKGTNWER Trigger: TCTTTCCCAGTTGGTGCCCTTATGGGCCATACATCACCAGCACGCTTTCGAGAGGACCAATGCAACGATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR TCA 72 bp | AATACATCTTCCAAGAGCTCCAGATATCGGCCAGGTTaGCCTCTCCTAGCCCGAACCCAAGCTGTCACCAAC | + |
Preference number: 3 (lower is better) Translates to: NTSSKSSRYRPG*PLLARTQAVTN Trigger: GTTGGTGACAGCTTGGGTTCGGGCTAGGAGAGGTCAACCTGGCCGATATCTGGAGCTCTTGGAAGATGTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR TCA 72 bp | GGCAATCAGCACTCCAGACAACTGGATGTCATGGCTTaGGCTTGGTGTGTGCTTTCCAACTGTGGTCACTCC | + |
Preference number: 3 (lower is better) Translates to: GNQHSRQLDVMA*AWCVLSNCGHS Trigger: GGAGTGACCACAGTTGGAAAGCACACACCAAGCTCAAGCCATGACATCCAGTTGTCTGGAGTGCTGATTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 72 bp | TCGTTACAGAAGGGAGACTACCATTGGCTTATCATCTaGTACTGGGCAAGCGCCCTCCTTCCTCTCTGTCAC | + |
Preference number: 3 (lower is better) Translates to: SLQKGDYHWLII*YWASALLPLCH Trigger: GTGACAGAGAGGAAGGAGGGCGCTTGCCCAGTAGCAGATGATAAGCCAATGGTAGTCTCCCTTCTGTAACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR GCA 72 bp | CGCAGTCAGCCCTGTCTGACTTGCACTGCTCTTCCTTaGTATTCGAAGAACAAGACTCCCAGGGTTTCGACA | + |
Preference number: 3 (lower is better) Translates to: RSQPCLTCTALP*YSKNKTPRVST Trigger: TGTCGAAACCCTGGGAGTCTTGTTCTTCGAATAGCAAGGAAGAGCAGTGCAAGTCAGACAGGGCTGACTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 72 bp | TTGGCCCGCTTTTCCCGCAGTCAGCCCTGTCTGACTTaGACTGCTCTTCCTTGCTATTCGAAGAACAAGACT | + |
Preference number: 3 (lower is better) Translates to: LARFSRSQPCLT*TALPCYSKNKT Trigger: AGTCTTGTTCTTCGAATAGCAAGGAAGAGCAGTGCAAGTCAGACAGGGCTGACTGCGGGAAAAGCGGGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 72 bp | TCTAAGAGACTCTTCATCCCAGAGGTTACACCATCCTaGAGAGCGGCCATGAACTCCTGGGTACTGGAGACT | + |
Preference number: 3 (lower is better) Translates to: SKRLFIPEVTPS*RAAMNSWVLET Trigger: AGTCTCCAGTACCCAGGAGTTCATGGCCGCTCTCCAGGATGGTGTAACCTCTGGGATGAAGAGTCTCTTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR-3UTR CAA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACACTTGTGGAGGGAAAATaGGGAAGGGGGATAACATTT | + |
Preference number: 3 (lower is better) Translates to: DKEKQPRSHQGPASPMLTLVEGK*GRGITF Trigger: AAATGTTATCCCCCTTCCCAATTTTCCCTCCACAAG...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR-3UTR CAA 90 bp | CTAGAGACTCCAGTTCCTCACAGTCAGCACGAGGCAGTTCATTTCCGCAGCTGCTGCGATCTGAATTCCTaGCATCATTTCTTCCTTCGC | + |
Preference number: 3 (lower is better) Translates to: LETPVPHSQHEAVHFRSCCDLNS*HHFFLR Trigger: GCGAAGGAAGAAATGATGCAAGGAATTCAGATCGCA...GCAGCTGCGGAAATGAACTGCCTCGTGCTGACTGTGAGGAACTGGAGTCTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CCA 72 bp | GAACCAGGAAGGAAGCAGCTAGTGCCTCATTTAAGGTaGTGTAGTTACTCACCGGCCTGCAGTACAGTGTTC | + |
Preference number: 3 (lower is better) Translates to: EPGRKQLVPHLR*CSYSPACSTVF Trigger: GAACACTGTACTGCAGGCCGGTGAGTAACTACACCACCTTAAATGAGGCACTAGCTGCTTCCTTCCTGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CCA 72 bp | TCATCGGCAATCAGCACTCCAGACAACTGGATGTCATaGCTTGAGCTTGGTGTGTGCTTTCCAACTGTGGTC | + |
Preference number: 3 (lower is better) Translates to: SSAISTPDNWMS*LELGVCFPTVV Trigger: GACCACAGTTGGAAAGCACACACCAAGCTCAAGCCATGACATCCAGTTGTCTGGAGTGCTGATTGCCGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR CCA 72 bp | CATGTCGGATTCTATGGTCTTCTAAGGCCTGCTTTGTaGCCAGGGTCTCCATCTCCAGTCGCCTTTTGTTCA | + |
Preference number: 3 (lower is better) Translates to: HVGFYGLLRPAL*PGSPSPVAFCS Trigger: TGAACAAAAGGCGACTGGAGATGGAGACCCTGGCCACAAAGCAGGCCTTAGAAGACCATAGAATCCGACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR CAA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATCTGCCGCCCACCGCATaGATGGATAAGAGCAATACG | + |
Preference number: 3 (lower is better) Translates to: TIHRSTSFALSICLTQWDLPPTA*MDKSNT Trigger: CGTATTGCTCTTATCCATCAATGCGGTGGGCGGCAG...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR CAA 90 bp | CTAGAGACTCCAGTTCCTCACAGTCAGCACGAGGCAGTTCATTTCCGCAGCTGCAGAACCTTCTTGTGCTaGAGTTCTGAAGCTTTTCGT | + |
Preference number: 3 (lower is better) Translates to: LETPVPHSQHEAVHFRSCRTFLC*SSEAFR Trigger: ACGAAAAGCTTCAGAACTCAAGCACAAGAAGGTTCT...GCAGCTGCGGAAATGAACTGCCTCGTGCTGACTGTGAGGAACTGGAGTCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR TCA 72 bp | ATGACTGTTCATGACGACTGTCAGTGTCCCAGAGCTTaGATCAAAGCAGGCACGGGGATGCTTGCACTTTGT | + |
Preference number: 3 (lower is better) Translates to: MTVHDDCQCPRA*IKAGTGMLALC Trigger: ACAAAGTGCAAGCATCCCCGTGCCTGCTTTGATTCAAGCTCTGGGACACTGACAGTCGTCATGAACAGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR GCA 72 bp | ACTCTTCCCTCAGCTCCGCCTCTAGGGCCTGGATTTTaGGCTCATACACAGCTTTTTGGGAAGAAAGTTCTT | + |
Preference number: 3 (lower is better) Translates to: TLPSAPPLGPGF*AHTQLFGKKVL Trigger: AAGAACTTTCTTCCCAAAAAGCTGTGTATGAGCGCAAAATCCAGGCCCTAGAGGCGGAGCTGAGGGAAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR GCA 72 bp | TGGAGACTTTGCTGCTGTTTTCCAGAACACAGAGCTTaGTCCCTTTCAGAACAGCTAGCTGACCCACACACT | + |
Preference number: 3 (lower is better) Translates to: WRLCCCFPEHRA*SLSEQLADPHT Trigger: AGTGTGTGGGTCAGCTAGCTGTTCTGAAAGGGAGCAAGCTCTGTGTTCTGGAAAACAGCAGCAAAGTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR CCA 72 bp | AGTCCATCATCACGGATAAGACAAGGCTGCAGGACCTaGAAGCAGCTATTCGTTCATTCCCAGTCAAGAGCA | + |
Preference number: 3 (lower is better) Translates to: SPSSRIRQGCRT*KQLFVHSQSRA Trigger: TGCTCTTGACTGGGAATGAACGAATAGCTGCTTCCAGGTCCTGCAGCCTTGTCTTATCCGTGATGATGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR CAA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATGAGGGGTTAGGAGGCTaGTGGAGGGAAAATTGGGAA | + |
Preference number: 3 (lower is better) Translates to: TIHRSTSFALSICLTQWDEGLGG*WRENWE Trigger: TTCCCAATTTTCCCTCCACAAGCCTCCTAACCCCTC...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR CAA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATCAGTGTCCCAGAGCTaGAATCAAAGCAGGCACGGG | + |
Preference number: 3 (lower is better) Translates to: ISTIHRSTSFALSICLTQSVSQS*NQSRHG Trigger: CCCGTGCCTGCTTTGATTCAAGCTCTGGGACACTGA...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR CAA 90 bp | TGTGCGTCCCGTTTACATATGTCTTTGCTTCTCCAGCTGGGACAATACTCACTGTGTCATGGCTTGAGCTaGGTGTGTGCTTTCCAACTG | + |
Preference number: 3 (lower is better) Translates to: CASRLHMSLLLQLGQYSLCHGLS*VCAFQL Trigger: CAGTTGGAAAGCACACACCAAGCTCAAGCCATGACA...CAGTGAGTATTGTCCCAGCTGGAGAAGCAAAGACATATGTAAACGGGACGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR CCA 72 bp | CTACACCCAGCGAGAGGCCACACACAGGCATGGACTTaGAATATTTACACTCCTCTCTTTTTATGCTCTCCT | + |
Preference number: 3 (lower is better) Translates to: LHPARGHTQAWT*NIYTPLFLCSP Trigger: AGGAGAGCATAAAAAGAGAGGAGTGTAAATATTCCAAGTCCATGCCTGTGTGTGGCCTCTCGCTGGGTGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR CCA 72 bp | CGCTTTCTACACCCAGCGAGAGGCCACACACAGGCATaGACTTGGAATATTTACACTCCTCTCTTTTTATGC | + |
Preference number: 3 (lower is better) Translates to: RFLHPARGHTQA*TWNIYTPLFLC Trigger: GCATAAAAAGAGAGGAGTGTAAATATTCCAAGTCCATGCCTGTGTGTGGCCTCTCGCTGGGTGTAGAAAGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR CCA 72 bp | TGTCATGGCTTGAGCTTGGTGTGTGCTTTCCAACTGTaGTCACTCCTTCCTTTACCATGTAGAGCAGCATCT | + |
Preference number: 3 (lower is better) Translates to: CHGLSLVCAFQL*SLLPLPCRAAS Trigger: AGATGCTGCTCTACATGGTAAAGGAAGGAGTGACCACAGTTGGAAAGCACACACCAAGCTCAAGCCATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR CCA 72 bp | TCTAAAGCTTCTAAGATCCTTGCATGTCGGATTCTATaGTCTTCTAAGGCCTGCTTTGTGGCCAGGGTCTCC | + |
Preference number: 3 (lower is better) Translates to: SKASKILACRIL*SSKACFVARVS Trigger: GGAGACCCTGGCCACAAAGCAGGCCTTAGAAGACCATAGAATCCGACATGCAAGGATCTTAGAAGCTTTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR CCA 72 bp | AACTTTTCCAGGCTCCAGAAAGTTGAGATCCCAAGCTaGAGGTTACGAACTCGAACAGAGGTATCAGAACGG | + |
Preference number: 3 (lower is better) Translates to: NFSRLQKVEIPS*RLRTRTEVSER Trigger: CCGTTCTGATACCTCTGTTCGAGTTCGTAACCTCCAGCTTGGGATCTCAACTTTCTGGAGCCTGGAAAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR CAA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAGAAGATGGCAAACAGTaGATTCTTGGACAAAGAGCT | + |
Preference number: 3 (lower is better) Translates to: THGKSLTEPAQVTQAKILEDGKQ*ILGQRA Trigger: AGCTCTTTGTCCAAGAATCAACTGTTTGCCATCTTC...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR CAA 90 bp | GCCTCAAGCCGAGACCTCTGTGCTGTAAGTAACTCATTTTTGGCAAACTCAAAAAAACCCTCTTTCCGTTaGCTTGCTCGGAGAGTGCAG | + |
Preference number: 3 (lower is better) Translates to: ASSRDLCAVSNSFLANSKKPSFR*LARRVQ Trigger: CTGCACTCTCCGAGCAAGCAAACGGAAAGAGGGTTT...TTTTGAGTTTGCCAAAAATGAGTTACTTACAGCACAGAGGTCTCGGCTTGAGGC 48% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR CAA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCACTTGTGGAGGGAAAATaGGGAAGGGGGATAACATTT | + |
Preference number: 3 (lower is better) Translates to: LSKFKEAQRSGRILPRTSLVEGK*GRGITF Trigger: AAATGTTATCCCCCTTCCCAATTTTCCCTCCACAAG...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR CAA 90 bp | TGTGCGTCCCGTTTACATATGTCTTTGCTTCTCCAGCTGGGACAATACTCACTGAAAGTCAGCAAGGACTaGTTAATGCTCACACCTTCC | + |
Preference number: 3 (lower is better) Translates to: CASRLHMSLLLQLGQYSLKVSKD*LMLTPS Trigger: GGAAGGTGTGAGCATTAACAAGTCCTTGCTGACTTT...CAGTGAGTATTGTCCCAGCTGGAGAAGCAAAGACATATGTAAACGGGACGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR CAA 90 bp | ATGGACGGTCTCCAAGTGCACAATGGTTTCATACCCACTGAATCCTATTCGGGGCAATCATGGCTGTTTTaGAATTTCCACCCAGGCTTT | + |
Preference number: 3 (lower is better) Translates to: MDGLQVHNGFIPTESYSGQSWLF*NFHPGF Trigger: AAAGCCTGGGTGGAAATTCAAAAACAGCCATGATTG...CCCCGAATAGGATTCAGTGGGTATGAAACCATTGTGCACTTGGAGACCGTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR TCA 72 bp | ACATTGGCATCTGCTTGCACCAGGTATGATCTTATTTaGGACAGGGTTTCTCTGTGTAGACCAGGCTGTCCT | + |
Preference number: 3 (lower is better) Translates to: TLASACTRYDLI*DRVSLCRPGCP Trigger: AGGACAGCCTGGTCTACACAGAGAAACCCTGTCTCAAATAAGATCATACCTGGTGCAAGCAGATGCCAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR TCA 72 bp | GAAGAAAGTTCTTGCTGGGCCATCTCCTTTGCGATCTaGATTCCTTGCATCATTTCTTCCTTCGCCTTCAGC | + |
Preference number: 3 (lower is better) Translates to: EESSCWAISFAI*IPCIISSFAFS Trigger: GCTGAAGGCGAAGGAAGAAATGATGCAAGGAATTCAGATCGCAAAGGAGATGGCCCAGCAAGAACTTTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR TCA 72 bp | TCCATTAATCCAGATGAGTGTGAAGACTGCATGCTCTaGATCGGATGGATGTCATGCAGACAGCCAGAGACT | + |
Preference number: 3 (lower is better) Translates to: SINPDECEDCML*IGWMSCRQPET Trigger: AGTCTCTGGCTGTCTGCATGACATCCATCCGATTCAGAGCATGCAGTCTTCACACTCATCTGGATTAATGGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR GCA 72 bp | TATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTaGCCAGGCAATAGCACTTCGACAAATGCAGTCAAG | + |
Preference number: 3 (lower is better) Translates to: YHFLHPLQFRDL*PGNSTSTNAVK Trigger: CTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR GCA 72 bp | TCCCAGAGCTTGAATCAAAGCAGGCACGGGGATGCTTaGACTTTGTGGACGTGTGATGCATTTTATAGTAAG | + |
Preference number: 3 (lower is better) Translates to: SQSLNQSRHGDA*TLWTCDAFYSK Trigger: CTTACTATAAAATGCATCACACGTCCACAAAGTGCAAGCATCCCCGTGCCTGCTTTGATTCAAGCTCTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR GCA 72 bp | TCCCGATATGGAATAAAAACCCTCTTTCCGTTTGCTTaGTCGGAGAGTGCAGATATGACCTTCCCCAAAGTC | + |
Preference number: 3 (lower is better) Translates to: SRYGIKTLFPFA*SESADMTFPKV Trigger: GACTTTGGGGAAGGTCATATCTGCACTCTCCGAGCAAGCAAACGGAAAGAGGGTTTTTATTCCATATCGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR CCA 72 bp | TTCCTTTACCATGTAGAGCAGCATCTCCGACAGCTGTaGGTCTTCATTGAGATTGACAAGGTTTGGCAAGTG | + |
Preference number: 3 (lower is better) Translates to: FLYHVEQHLRQL*VFIEIDKVWQV Trigger: CACTTGCCAAACCTTGTCAATCTCAATGAAGACCCACAGCTGTCGGAGATGCTGCTCTACATGGTAAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR TCA 72 bp | AGCCAGTACAAGGTAGAAAATCACCCAGCCAGTGTTTaGACAAAACCACAAGCTGCTCAAAGGCACAAGCAA | + |
Preference number: 3 (lower is better) Translates to: SQYKVENHPASV*TKPQAAQRHKQ Trigger: TTGCTTGTGCCTTTGAGCAGCTTGTGGTTTTGTTCAAACACTGGCTGGGTGATTTTCTACCTTGTACTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR GCA 72 bp | ACTTTTCATGCACATGATTCTGACAGCAATGCCTTCTaGACCACCCACTCGAACACAGTCCCACAGATTATT | + |
Preference number: 3 (lower is better) Translates to: TFHAHDSDSNAF*TTHSNTVPQII Trigger: AATAATCTGTGGGACTGTGTTCGAGTGGGTGGTGCAGAAGGCATTGCTGTCAGAATCATGTGCATGAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR GCA 72 bp | AATAAAAACCCTCTTTCCGTTTGCTTGCTCGGAGAGTaGAGATATGACCTTCCCCAAAGTCAGCAAGGACTT | + |
Preference number: 3 (lower is better) Translates to: NKNPLSVCLLGE*RYDLPQSQQGL Trigger: AAGTCCTTGCTGACTTTGGGGAAGGTCATATCTGCACTCTCCGAGCAAGCAAACGGAAAGAGGGTTTTTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR GCA 72 bp | GTTTTTCCATTAATCCAGATGAGTGTGAAGACTGCATaGTCTGAATCGGATGGATGTCATGCAGACAGCCAG | + |
Preference number: 3 (lower is better) Translates to: VFPLIQMSVKTA*SESDGCHADSQ Trigger: CTGGCTGTCTGCATGACATCCATCCGATTCAGAGCATGCAGTCTTCACACTCATCTGGATTAATGGAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR CCA 72 bp | CGACAGCTGTGGGTCTTCATTGAGATTGACAAGGTTTaGCAAGTGGTTGTCCATTTGAAATGTAACTCCTGC | + |
Preference number: 3 (lower is better) Translates to: RQLWVFIEIDKV*QVVVHLKCNSC Trigger: GCAGGAGTTACATTTCAAATGGACAACCACTTGCCAAACCTTGTCAATCTCAATGAAGACCCACAGCTGTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR CCA 72 bp | CTGAATCATCGTGGAGAGTTTCATGGAGTTCCAGTTTaGCTGAATGGTGAAAGTTTTATCCCTGTTTCCCCG | + |
Preference number: 3 (lower is better) Translates to: LNHRGEFHGVPV*LNGESFIPVSP Trigger: CGGGGAAACAGGGATAAAACTTTCACCATTCAGCCAAACTGGAACTCCATGAAACTCTCCACGATGATTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR CAA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATGAAGATGGCAAACAGTaGATTCTTGGACAAAGAGCT | + |
Preference number: 3 (lower is better) Translates to: TIHRSTSFALSICLTQWDEDGKQ*ILGQRA Trigger: AGCTCTTTGTCCAAGAATCAACTGTTTGCCATCTTC...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR CAA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCATACCCACAATATTTTaGAGGACAGACATGAGTTTG | + |
Preference number: 3 (lower is better) Translates to: YSSETSAQAIALRQMQSSIPTIF*RTDMSL Trigger: CAAACTCATGTCTGTCCTCAAAAATATTGTGGGTAT...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR-3UTR CAA 90 bp | GCCTCAAGCCGAGACCTCTGTGCTGTAAGTAACTCATTTTTGGCAAACTCAAAACGTTTACATATGTCTTaGCTTCTCCAGCTGGGACAA | + |
Preference number: 3 (lower is better) Translates to: ASSRDLCAVSNSFLANSKRLHMS*LLQLGQ Trigger: TTGTCCCAGCTGGAGAAGCAAAGACATATGTAAACG...TTTTGAGTTTGCCAAAAATGAGTTACTTACAGCACAGAGGTCTCGGCTTGAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR CAA 90 bp | GACTTTCTTCATCCTGCTCTTCATGGGCTTTGGAGATGGCAATCACCCCATTATCTCATACACAGCTTTTaGGGAAGAAAGTTCTTGCTG | + |
Preference number: 3 (lower is better) Translates to: DFLHPALHGLWRWQSPHYLIHSF*GRKFLL Trigger: CAGCAAGAACTTTCTTCCCAAAAAGCTGTGTATGAG...ATAATGGGGTGATTGCCATCTCCAAAGCCCATGAAGAGCAGGATGAAGAAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR TCA 72 bp | ATTGCACAGCAAGGTGAAAACTGCCATTTTGGTACTTaGGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAA | + |
Preference number: 3 (lower is better) Translates to: IAQQGENCHFGT*VSSRKLSAQEE Trigger: TTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAAGTACCAAAATGGCAGTTTTCACCTTGCTGTGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR TCA 72 bp | ATCATCGTGGAGAGTTTCATGGAGTTCCAGTTTGGCTaGATGGTGAAAGTTTTATCCCTGTTTCCCCGATTC | + |
Preference number: 3 (lower is better) Translates to: IIVESFMEFQFG*MVKVLSLFPRF Trigger: GAATCGGGGAAACAGGGATAAAACTTTCACCATTCAGCCAAACTGGAACTCCATGAAACTCTCCACGATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR TCA 72 bp | AGCTTGGAAACTTGTTGTCTAGAACCTTCTTGTGCTTaGGTTCTGAAGCTTTTCGTCCTCCATTCAGCGACA | + |
Preference number: 3 (lower is better) Translates to: SLETCCLEPSCA*VLKLFVLHSAT Trigger: TGTCGCTGAATGGAGGACGAAAAGCTTCAGAACTCAAGCACAAGAAGGTTCTAGACAACAAGTTTCCAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR GCA 72 bp | GCATGGACTTGGAATATTTACACTCCTCTCTTTTTATaGTCTCCTGCACGAGGAAAAGTGACACCAAGTGTC | + |
Preference number: 3 (lower is better) Translates to: AWTWNIYTPLFL*SPARGKVTPSV Trigger: GACACTTGGTGTCACTTTTCCTCGTGCAGGAGAGCATAAAAAGAGAGGAGTGTAAATATTCCAAGTCCATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR GCA 72 bp | CTCCTAGATATCCACAATTCACAGATCGACCAGCTTTaGCCTATCAATATGCCTCACCCAATGGGATATTAC | + |
Preference number: 3 (lower is better) Translates to: LLDIHNSQIDQL*PINMPHPMGYY Trigger: GTAATATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATATCTAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR CCA 72 bp | GTGCGTCCCGTTTACATATGTCTTTGCTTCTCCAGCTaGGACAATACTCACTGTTCCTCCAAAATTTCTGAT | + |
Preference number: 3 (lower is better) Translates to: VRPVYICLCFSS*DNTHCSSKISD Trigger: ATCAGAAATTTTGGAGGAACAGTGAGTATTGTCCCAGCTGGAGAAGCAAAGACATATGTAAACGGGACGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR CAA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAACACTGCTGAGCAGATaGGACAACTGTAATATAGAC | + |
Preference number: 3 (lower is better) Translates to: ISTIHRSTSFALSICLTQTLLSR*DNCNID Trigger: GTCTATATTACAGTTGTCCAATCTGCTCAGCAGTGT...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR TCA 72 bp | AAGTTTAGATTCAAACTTTTCCAGGCTCCAGAAAGTTaGGATCCCAAGCTGGAGGTTACGAACTCGAACAGA | + |
Preference number: 3 (lower is better) Translates to: KFRFKLFQAPES*DPKLEVTNSNR Trigger: TCTGTTCGAGTTCGTAACCTCCAGCTTGGGATCTCAACTTTCTGGAGCCTGGAAAAGTTTGAATCTAAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR GCA 72 bp | ATACCATTCATAGCCACATCAATCCAGCCTGAGATCTaGTTTACTTTCTTGACCCGAACTCCTAGATATCCA | + |
Preference number: 3 (lower is better) Translates to: IPFIATSIQPEI*FTFLTRTPRYP Trigger: TGGATATCTAGGAGTTCGGGTCAAGAAAGTAAAGCAGATCTCAGGCTGGATTGATGTGGCTATGAATGGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR CCA 72 bp | TCCCGGGAAGAAAGGACTCTGATGAATTTGAGTAAATaGTGCTCGGTTTTTCCATTAATCCAGATGAGTGTG | + |
Preference number: 3 (lower is better) Translates to: SREERTLMNLSK*CSVFPLIQMSV Trigger: CACACTCATCTGGATTAATGGAAAAACCGAGCACCATTTACTCAAATTCATCAGAGTCCTTTCTTCCCGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR TCA 72 bp | GCTATTCGTTCATTCCCAGTCAAGAGCAGAGAACAATaGATTAATGCAAGCACGGTAGTTCTCCTATCACTT | + |
Preference number: 3 (lower is better) Translates to: AIRSFPVKSREQ*INASTVVLLSL Trigger: AAGTGATAGGAGAACTACCGTGCTTGCATTAATTCATTGTTCTCTGCTCTTGACTGGGAATGAACGAATAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR TCA 72 bp | ACGAACTCGAACAGAGGTATCAGAACGGCCTTTGTCTaGTGCATCATGTCTGCCAAAAATATAGCACTTTTT | + |
Preference number: 3 (lower is better) Translates to: TNSNRGIRTAFV*CIMSAKNIALF Trigger: AAAAAGTGCTATATTTTTGGCAGACATGATGCATCAGACAAAGGCCGTTCTGATACCTCTGTTCGAGTTCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR GCA 72 bp | CGGGAAGAAAGGACTCTGATGAATTTGAGTAAATGGTaGTCGGTTTTTCCATTAATCCAGATGAGTGTGAAG | + |
Preference number: 3 (lower is better) Translates to: REERTLMNLSKW*SVFPLIQMSVK Trigger: CTTCACACTCATCTGGATTAATGGAAAAACCGAGCACCATTTACTCAAATTCATCAGAGTCCTTTCTTCCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR-3UTR CAA 90 bp | CCTGTCACCACCGTTACTCTCATAAAGCTCTTTCATTGCTGCAAGTTTAGATTCATTCTCCTGAAGCATTaGTACTTCTTCAGCGATCTT | + |
Preference number: 3 (lower is better) Translates to: PVTTVTLIKLFHCCKFRFILLKH*YFFSDL Trigger: AAGATCGCTGAAGAAGTACAAATGCTTCAGGAGAAT...GAATCTAAACTTGCAGCAATGAAAGAGCTTTATGAGAGTAACGGTGGTGACAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR TCA 72 bp | TTGAGATTGACAAGGTTTGGCAAGTGGTTGTCCATTTaGAATGTAACTCCTGCTTTCTGTAACTCCTTTGTC | + |
Preference number: 3 (lower is better) Translates to: LRLTRFGKWLSI*NVTPAFCNSFV Trigger: GACAAAGGAGTTACAGAAAGCAGGAGTTACATTTCAAATGGACAACCACTTGCCAAACCTTGTCAATCTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR GCA 72 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATaGCTCACCCAATGGGATATTACACTAATAGATTAC | + |
Preference number: 3 (lower is better) Translates to: TIHRSTSFALSI*LTQWDITLIDY Trigger: GTAATCTATTAGTGTAATATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CCA 72 bp | TTGAATCAAAGCAGGCACGGGGATGCTTGCACTTTGTaGACGTGTGATGCATTTTATAGTAAGATTACTAAA | + |
Preference number: 3 (lower is better) Translates to: LNQSRHGDACTL*TCDAFYSKITK Trigger: TTTAGTAATCTTACTATAAAATGCATCACACGTCCACAAAGTGCAAGCATCCCCGTGCCTGCTTTGATTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR TCA 72 bp | CTTCATGACTTTGTTTTGAGCCTCTTTAACCATCGATaGAATATCCGAACAGCATCCCTGCAAAAACAATTG | + |
Preference number: 3 (lower is better) Translates to: LHDFVLSLFNHR*NIRTASLQKQL Trigger: CAATTGTTTTTGCAGGGATGCTGTTCGGATATTTCATCGATGGTTAAAGAGGCTCAAAACAAAGTCATGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR GCA 72 bp | CTTTTCAATTTCTGCTTTCAACTCTCTGATCAACTTTaGATTCATGTCCTCGTTGACTTTGGCGATATTGAC | + |
Preference number: 3 (lower is better) Translates to: LFNFCFQLSDQL*IHVLVDFGDID Trigger: GTCAATATCGCCAAAGTCAACGAGGACATGAATGCAAAGTTGATCAGAGAGTTGAAAGCAGAAATTGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR TCA 72 bp | AGAGATGGAGAAACTAAAGATTATTGCACAGCAAGGTaGAAACTGCCATTTTGGTACTTGAGTAAGTTCAAG | + |
Preference number: 3 (lower is better) Translates to: RDGETKDYCTAR*KLPFWYLSKFK Trigger: CTTGAACTTACTCAAGTACCAAAATGGCAGTTTTCACCTTGCTGTGCAATAATCTTTAGTTTCTCCATCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR GCA 72 bp | AAACCAGTGTTGGTAGATATACTATTAAACACATCATaGTTCAAGGGCTGTAATACACAACATTGGCATCTG | + |
Preference number: 3 (lower is better) Translates to: KPVLVDILLNTS*FKGCNTQHWHL Trigger: CAGATGCCAATGTTGTGTATTACAGCCCTTGAAGCATGATGTGTTTAATAGTATATCTACCAACACTGGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CCA 72 bp | AACACTGGAATTCACTCATCCTTATATCAGTTACTGTaGAAACCAGTGTTGGTAGATATACTATTAAACACA | + |
Preference number: 3 (lower is better) Translates to: NTGIHSSLYQLL*KPVLVDILLNT Trigger: TGTGTTTAATAGTATATCTACCAACACTGGTTTCCACAGTAACTGATATAAGGATGAGTGAATTCCAGTGTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR CAA 72 bp | CTGGGGTTGCGTCTCCGTGTGGTTCACAGGCGCGTCTaGGCCCGCTTTTCCCGCAGTCAGCCCTGTCTGACT | + |
Preference number: 4 (lower is better) Translates to: LGLRLRVVHRRV*ARFSRSQPCLT Trigger: AGTCAGACAGGGCTGACTGCGGGAAAAGCGGGCCAAGACGCGCCTGTGAACCACACGGAGACGCAACCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
CDS-3UTR CCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACACACTCGAGTGGGCGGTaGAGCAGCGCTCACTGCCGG | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTHSSGR*SSAHCR Trigger: CCGGCAGTGAGCGCTGCTCCACCGCCCACTCGAGTG...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAGCGCTGAAGTCACTGTaGAGCTTGCGAGCCAGGCTG | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRALKSL*SLRARL Trigger: CAGCCTGGCTCGCAAGCTTCACAGTGACTTCAGCGC...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR CCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAAGCTGGGCTTTTCGGTaGAGGCGGGTCATGCCTTGG | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRSWAFR*RRVMPW Trigger: CCAAGGCATGACCCGCCTCCACCGAAAAGCCCAGCT...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189413.7 |
||
CDS-3UTR CCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGACGGCTCGTGATCCTGTaGTCATGTTCCTCTCCCTCC | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRRLVIL*SCSSPS Trigger: GGAGGGAGAGGAACATGACCACAGGATCACGAGCCG...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGATCTTCTCTCTTTTGCTaGAAGGCCTCACGCGCACCG | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRSSLFC*KASRAP Trigger: CGGTGCGCGTGAGGCCTTTCAGCAAAAGAGAGAAGA...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGATGCTTCTGTCCTCGATaGCTGGGAGGCAGAGTCACT | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRCFCPR*LGGRVT Trigger: AGTGACTCTGCCTCCCAGGCATCGAGGACAGAAGCA...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGATGGTCTTCTAAGGCCTaGTTTGTGGCCAGGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRWSSKA*FVARVS Trigger: GGAGACCCTGGCCACAAAGCAGGCCTTAGAAGACCA...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGACCACCACCTCTGTCTTaGTCTGTGTCATCACCAGGG | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRPPPLS*SVSSPG Trigger: CCCTGGTGATGACACAGACCAAGACAGAGGTGGTGG...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACACTCATAGCTTCAGTCTaGCGCTGGGAACCCACAGGC | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTLIASV*RWEPTG Trigger: GCCTGTGGGTTCCCAGCGTCAGACTGAAGCTATGAG...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACAAGCTGGGCTTTTCGGTaGAGGCAGGTCATGCCTTGG | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTSWAFR*RQVMPW Trigger: CCAAGGCATGACCTGCCTCCACCGAAAAGCCCAGCT...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | GAGACTCCAGTTCCTCACAGTCAGCACGAGGCAGTTCATTTCCGCAGCTGCCAGTCTTCTCTCTTTTGCTaGAAGGCCTCACGCGCACCG | + |
Preference number: 4 (lower is better) Translates to: ETPVPHSQHEAVHFRSCQSSLFC*KASRAP Trigger: CGGTGCGCGTGAGGCCTTTCAGCAAAAGAGAGAAGA...CTGGCAGCTGCGGAAATGAACTGCCTCGTGCTGACTGTGAGGAACTGGAGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR GCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACATGCTTCTGTCCTCGATaGCTGGGAGGCAGAGTCACT | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTCFCPR*LGGRVT Trigger: AGTGACTCTGCCTCCCAGGCATCGAGGACAGAAGCA...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAGCTCTTCATGGGCTTTaGAGATGGCAATCACCCCAT | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRALHGL*RWQSPH Trigger: ATGGGGTGATTGCCATCTCCAAAGCCCATGAAGAGC...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACACGGAGAGTGCAGATATaGCCTTCCCCAAAGTCAGCA | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTRRVQI*PSPKSA Trigger: TGCTGACTTTGGGGAAGGTCATATCTGCACTCTCCG...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGATCCTTCGCCTTCAGCTaGGCATCTTTAATTTCTGCC | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRSFAFS*ASLISA Trigger: GGCAGAAATTAAAGATGCGCAGCTGAAGGCGAAGGA...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAACTTCCTGTTCAAGATaGTGCTTCGCCCTTTCCAAC | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRTSCSR*CFALSN Trigger: GTTGGAAAGGGCGAAGCAGCATCTTGAACAGGAAGT...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCTGCCTGGAGAGGTCCTaGCTGAGGTCTTGCGCGGTC | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSCLERS*LRSCAV Trigger: GACCGCGCAAGACCTCAGGCAGGACCTCTCCAGGCA...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACAGGCAGAGTCACTTCCTaGGTTACCTCCCACAGGATT | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTGRVTS*VTSHRI Trigger: AATCCTGTGGGAGGTAACCCAGGAAGTGACTCTGCC...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | TGCTTTGTGGCCAGGGTCTCCATCTCCAGTCGCCTTTTGTTCACGTACACTTCCAGCTGGGCTTTTCGGTaGAGGCAGGTCATGCCTTGG | + |
Preference number: 4 (lower is better) Translates to: CFVARVSISSRLLFTYTSSWAFR*RQVMPW Trigger: CCAAGGCATGACCTGCCTCCACCGAAAAGCCCAGCT...GGAAGTGTACGTGAACAAAAGGCGACTGGAGATGGAGACCCTGGCCACAAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR CCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAAGCACTCCAGACAACTaGATGTCATGGCTTGAGCTT | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRSTPDN*MSWLEL Trigger: AAGCTCAAGCCATGACATCCAGTTGTCTGGAGTGCT...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGATCATCCTGCTCTTCATaGGCTTTGGAGATGGCAATC | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRSSCSS*ALEMAI Trigger: GATTGCCATCTCCAAAGCCCATGAAGAGCAGGATGA...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | CTCCTCCTTCTAGAAAGGGAAGAAACTGGTGTGCTTGTAATGTCGGGCTCCCACAGCTGGGCTTTTCGGTaGAGGCGGGTCATGCCTTGG | + |
Preference number: 4 (lower is better) Translates to: LLLLEREETGVLVMSGSHSWAFR*RRVMPW Trigger: CCAAGGCATGACCCGCCTCCACCGAAAAGCCCAGCT...GTGGGAGCCCGACATTACAAGCACACCAGTTTCTTCCCTTTCTAGAAGGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 72 bp | CGGTCCAGAAACAGGGTGCTCCCTCGCGCGCAGTGGTaGTTTCCTCTGCCCATTTTCACCTTTACAAACCAG | + |
Preference number: 4 (lower is better) Translates to: RSRNRVLPRAQW*FPLPIFTFTNQ Trigger: CTGGTTTGTAAAGGTGAAAATGGGCAGAGGAAACAACCACTGCGCGCGAGGGAGCACCCTGTTTCTGGACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR TCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAGAGTGTGCTTTCTCGTaGGCTTTCCCTTTTATTTGC | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRECAFS*AFPFIC Trigger: GCAAATAAAAGGGAAAGCTCACGAGAAAGCACACTC...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACAACCGCCACGGTCACCTaGCTGTTCTCTACTTTTAAG | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTTATVT*LFSTFK Trigger: CTTAAAAGTAGAGAACAGTCAGGTGACCGTGGCGGT...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACATCCAATCTCTTCCTTTaGGACTCTTCCCTCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTSNLFL*DSSLSS Trigger: GGAGCTGAGGGAAGAGTCTCAAAGGAAGAGATTGGA...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCCCTGGAGAGCGGCCATaGACTCCTGGGTACTGGAGA | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSPGERP*TPGYWR Trigger: TCTCCAGTACCCAGGAGTTCATGGCCGCTCTCCAGG...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGACTAGGGCCTGGATTTTaGGCTCATACACAGCTTTTT | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRLGPGF*AHTQLF Trigger: AAAAAGCTGTGTATGAGCGCAAAATCCAGGCCCTAG...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACATCCTGTTCAAGATGCTaGTTCGCCCTTTCCAACTCC | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTSCSRC*FALSNS Trigger: GGAGTTGGAAAGGGCGAAGCAGCATCTTGAACAGGA...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCATGCCTGGAGAGGTCCTaGCTGAGGTCTTGCGCGGTC | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSCLERS*LRSCAV Trigger: GACCGCGCAAGACCTCAGGCAGGACCTCTCCAGGCA...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACACAGCCCTGTCTGACTTaGACTGCTCTTCCTTGCTAT | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTQPCLT*TALPCY Trigger: ATAGCAAGGAAGAGCAGTGCAAGTCAGACAGGGCTG...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTATGCCGGTGGCCGCCGTaGCTCTCTGTTTATTTCCCA | + |
Preference number: 4 (lower is better) Translates to: THGKSLTEPAQVTQAKILCRWPP*LSVYFP Trigger: TGGGAAATAAACAGAGAGCCACGGCGGCCACCGGCA...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAACACTCGAGTGGGCGGTaGAGCAGCGCTCACTGCCGG | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQHSSGR*SSAHCR Trigger: CCGGCAGTGAGCGCTGCTCCACCGCCCACTCGAGTG...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGATCGTGGAGAGTTTCATaGAGTTCCAGTTTGGCTGAA | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRSWRVS*SSSLAE Trigger: TTCAGCCAAACTGGAACTCCATGAAACTCTCCACGA...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGACTTCCTGAATCATCGTaGAGAGTTTCATGGAGTTCC | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRLPESS*RVSWSS Trigger: GGAACTCCATGAAACTCTCCACGATGATTCAGGAAG...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
3UTR CAA 72 bp | TGGAGAGCGGCCATGAACTCCTGGGTACTGGAGACTTaGCTGCTGTTTTCCAGAACACAGAGCTTGCTCCCT | + |
Preference number: 4 (lower is better) Translates to: WRAAMNSWVLET*LLFSRTQSLLP Trigger: AGGGAGCAAGCTCTGTGTTCTGGAAAACAGCAGCAAAGTCTCCAGTACCCAGGAGTTCATGGCCGCTCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
3UTR CAA 72 bp | CTTGGCCCGCTTTTCCCGCAGTCAGCCCTGTCTGACTaGCACTGCTCTTCCTTGCTATTCGAAGAACAAGAC | + |
Preference number: 4 (lower is better) Translates to: LGPLFPQSALSD*HCSSLLFEEQD Trigger: GTCTTGTTCTTCGAATAGCAAGGAAGAGCAGTGCAAGTCAGACAGGGCTGACTGCGGGAAAAGCGGGCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
CDS-3UTR TCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAACCACCCGATCACCATaGTGTAACACTGTGGGCTCC | + |
Preference number: 4 (lower is better) Translates to: THGKSLTEPAQVTQAKILTTRSP*CNTVGS Trigger: GGAGCCCACAGTGTTACATCATGGTGATCGGGTGGT...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAAGGCAGAGTGTGCGCTaGAGTCACTGTGAAGCTTGC | + |
Preference number: 4 (lower is better) Translates to: THGKSLTEPAQVTQAKILRQSVR*SHCEAC Trigger: GCAAGCTTCACAGTGACTTCAGCGCACACTCTGCCT...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR GCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATTGGAGCAGCGCTCACTaGCGGCCAGGTCCACAAGGT | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDWSSAH*RPGPQG Trigger: ACCTTGTGGACCTGGCCGGCAGTGAGCGCTGCTCCA...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR GCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTACAGCTTCTGAGACAGTaGAAGTCACTGGGGCACCCT | + |
Preference number: 4 (lower is better) Translates to: THGKSLTEPAQVTQAKILQLLRQ*KSLGHP Trigger: AGGGTGCCCCAGTGACTTGCACTGTCTCAGAAGCTG...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR GCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAGTTCATTTCCGCAGCTaGCAGCAGAGGCAGAGTGTG | + |
Preference number: 4 (lower is better) Translates to: THGKSLTEPAQVTQAKILVHFRS*QQRQSV Trigger: CACACTCTGCCTCTGCTGGCAGCTGCGGAAATGAAC...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR CCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAGAGATTGACAAGGTTTaGCAAGTGGTTGTCCATTTG | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHREIDKV*QVVVHL Trigger: CAAATGGACAACCACTTGCCAAACCTTGTCAATCTC...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR CCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACACTTTGCTTCTCCAGCTaGGACAATACTCACTGTTCC | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTLCFSS*DNTHCS Trigger: GGAACAGTGAGTATTGTCCCAGCTGGAGAAGCAAAG...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR CCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACATGTCCATCTGTGTTCTaGGACACATTTTACCGGGGT | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTCPSVF*DTFYRG Trigger: ACCCCGGTAAAATGTGTCCCAGAACACAGATGGACA...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAACCACCCGATCACCATaGTGTAACACTGTGGGCTCC | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQTTRSP*CNTVGS Trigger: GGAGCCCACAGTGTTACATCATGGTGATCGGGTGGT...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR GCA 90 bp | ATCTGCTTAGTGACCTCCTCTCGTGCACTCTGCCTGGAGAGGTCCTGCCTGAGGCCTAAGACTTGTGTCTaGTGTTCTTCTGTTTCCCAA | + |
Preference number: 4 (lower is better) Translates to: ICLVTSSRALCLERSCLRPKTCV*CSSVSQ Trigger: TTGGGAAACAGAAGAACAGCAGACACAAGTCTTAGG...CCTCAGGCAGGACCTCTCCAGGCAGAGTGCACGAGAGGAGGTCACTAAGCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
CDS-3UTR GCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAAGTGGTTGTTTCCTCTaGCCATTTTCACCTTTACAA | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRSGCFL*PFSPLQ Trigger: TTGTAAAGGTGAAAATGGGCAGAGGAAACAACCACT...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR GCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAGTTTACATATGTCTTTaGTTCTCCAGCTGGGACAAT | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRVYICL*FSSWDN Trigger: ATTGTCCCAGCTGGAGAAGCAAAGACATATGTAAAC...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR GCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCTGGTCTTCTAAGGCCTaGTTTGTGGCCAGGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSWSSKA*FVARVS Trigger: GGAGACCCTGGCCACAAAGCAGGCCTTAGAAGACCA...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR GCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCGTTCATTTCCGCAGCTaGCAGCAGAGGCAGAGTGTG | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSVHFRS*QQRQSV Trigger: CACACTCTGCCTCTGCTGGCAGCTGCGGAAATGAAC...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR CCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAACCACCACCTCTGTCTTaGTCTGTGTCATCACCAGGG | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQPPPLS*SVSSPG Trigger: CCCTGGTGATGACACAGACCAAGACAGAGGTGGTGG...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCACGGCTCGTGATCCTGTaGTCATGTTCCTCTCCCTCC | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSRLVIL*SCSSPS Trigger: GGAGGGAGAGGAACATGACCACAGGATCACGAGCCG...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR CCA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGATCATACACAGCTTTTTaGGAAGAAAGTTCTTGCTGG | + |
Preference number: 4 (lower is better) Translates to: HGSADHGRECCSPISPHRSYTAF*EESSCW Trigger: CCAGCAAGAACTTTCTTCCCAAAAAGCTGTGTATGA...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR CCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCCTAAGGCCTGCTTTGTaGCCAGGGTCTCCATCTCCA | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSLRPAL*PGSPSP Trigger: TGGAGATGGAGACCCTGGCCACAAAGCAGGCCTTAG...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACACTTCCTGAATCATCGTaGAGAGTTTCATGGAGTTCC | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTLPESS*RVSWSS Trigger: GGAACTCCATGAAACTCTCCACGATGATTCAGGAAG...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATCTCATAGCTTCAGTCTaGCGCTGGGAACCCACAGGC | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDLIASV*RWEPTG Trigger: GCCTGTGGGTTCCCAGCGTCAGACTGAAGCTATGAG...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACAAATCATGGCTGTTTTTaGATTTCCACCCAGGCTTTC | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTNHGCF*ISTQAF Trigger: GAAAGCCTGGGTGGAAATTCAAAAACAGCCATGATT...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTATCCTGTTCAAGATGCTaGTTCGCCCTTTCCAACTCC | + |
Preference number: 4 (lower is better) Translates to: THGKSLTEPAQVTQAKILSCSRC*FALSNS Trigger: GGAGTTGGAAAGGGCGAAGCAGCATCTTGAACAGGA...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACAAGCCAATCAATTCTTTaGAAATCCCGGGAAGAAAGG | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTSQSIL*KSREER Trigger: CCTTTCTTCCCGGGATTTGCAAAGAATTGATTGGCT...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCACAGCTTCTGAGACAGTaGAAGTCACTGGGGCACCCT | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSQLLRQ*KSLGHP Trigger: AGGGTGCCCCAGTGACTTGCACTGTCTCAGAAGCTG...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ATGGACGGTCTCCAAGTGCACAATGGTTTCATACCCACTGAATCCTATTCGGGGGGCAGAGTCACTTCCTaGGTTACCTCCCACAGGATT | + |
Preference number: 4 (lower is better) Translates to: MDGLQVHNGFIPTESYSGGRVTS*VTSHRI Trigger: AATCCTGTGGGAGGTAACCCAGGAAGTGACTCTGCC...CCCCGAATAGGATTCAGTGGGTATGAAACCATTGTGCACTTGGAGACCGTCCAT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR CCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAACCAACGGGAGGACCTaGGTCTTTGCATCTCGTCAA | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQTNGRT*VFASRQ Trigger: TTGACGAGATGCAAAGACCCAGGTCCTCCCGTTGGT...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | GCTTGGGTGGCGTATCTGAGTGTGCTCAGCGTTTCCTCTATGTTGCTGGCAGCGTCCTGTTTTTCAGTGTaGATAAAGCTGGGCTTTTCG | + |
Preference number: 4 (lower is better) Translates to: AWVAYLSVLSVSSMLLAASCFSV*IKLGFS Trigger: CGAAAAGCCCAGCTTTATCCACACTGAAAAACAGGA...CGCTGCCAGCAACATAGAGGAAACGCTGAGCACACTCAGATACGCCACCCAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR CCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATTGCCGGTGGCCGCCGTaGCTCTCTGTTTATTTCCCA | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDCRWPP*LSVYFP Trigger: TGGGAAATAAACAGAGAGCCACGGCGGCCACCGGCA...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCACTAAGGCCTGCTTTGTaGCCAGGGTCTCCATCTCCA | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSLRPAL*PGSPSP Trigger: TGGAGATGGAGACCCTGGCCACAAAGCAGGCCTTAG...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAGCTCTTCATGGGCTTTaGAGATGGCAATCACCCCAT | + |
Preference number: 4 (lower is better) Translates to: THGKSLTEPAQVTQAKILALHGL*RWQSPH Trigger: ATGGGGTGATTGCCATCTCCAAAGCCCATGAAGAGC...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCAAGGCACAAGCAACCTaGATGGTAAGAGCCTGTGCC | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSKAQAT*MVRACA Trigger: GGCACAGGCTCTTACCATCCAGGTTGCTTGTGCCTT...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CAA 72 bp | TGGGCTCCGAGATGTGCGTCCCGTTTACATATGTCTTaGCTTCTCCAGCTGGGACAATACTCACTGTTCCTC | + |
Preference number: 4 (lower is better) Translates to: WAPRCASRLHMS*LLQLGQYSLFL Trigger: GAGGAACAGTGAGTATTGTCCCAGCTGGAGAAGCAAAGACATATGTAAACGGGACGCACATCTCGGAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 72 bp | GACTCTTCCCTCAGCTCCGCCTCTAGGGCCTGGATTTaGCGCTCATACACAGCTTTTTGGGAAGAAAGTTCT | + |
Preference number: 4 (lower is better) Translates to: DSSLSSASRAWI*RSYTAFWEESS Trigger: AGAACTTTCTTCCCAAAAAGCTGTGTATGAGCGCAAAATCCAGGCCCTAGAGGCGGAGCTGAGGGAAGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 72 bp | TTGCATGTCGGATTCTATGGTCTTCTAAGGCCTGCTTaGTGGCCAGGGTCTCCATCTCCAGTCGCCTTTTGT | + |
Preference number: 4 (lower is better) Translates to: LHVGFYGLLRPA*WPGSPSPVAFC Trigger: ACAAAAGGCGACTGGAGATGGAGACCCTGGCCACAAAGCAGGCCTTAGAAGACCATAGAATCCGACATGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 72 bp | AAGAGCCTGTGCCGCCCGGTCAGAGAACAGGTTATCTaGACTTTCTTCATCCTGCTCTTCATGGGCTTTGGA | + |
Preference number: 4 (lower is better) Translates to: KSLCRPVREQVI*TFFILLFMGFG Trigger: TCCAAAGCCCATGAAGAGCAGGATGAAGAAAGTCAAGATAACCTGTTCTCTGACCGGGCGGCACAGGCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR TCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACATTCACGAATGGATCATaGTTCTCACACTCTGACATA | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTFTNGS*FSHSDI Trigger: TATGTCAGAGTGTGAGAATCATGATCCATTCGTGAA...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAACCGCCACGGTCACCTaGCTGTTCTCTACTTTTAAG | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQTATVT*LFSTFK Trigger: CTTAAAAGTAGAGAACAGTCAGGTGACCGTGGCGGT...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | TCTCCTGCTGATGCAGCTTCATCCTTAAGGACGTTATCTCTTGCCGACAGAGTCACCGCCACGGTCACCTaGCTGTTCTCTACTTTTAAG | + |
Preference number: 4 (lower is better) Translates to: SPADAASSLRTLSLADRVTATVT*LFSTFK Trigger: CTTAAAAGTAGAGAACAGTCAGGTGACCGTGGCGGT...GACTCTGTCGGCAAGAGATAACGTCCTTAAGGATGAAGCTGCATCAGCAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR TCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAATCTCTTCCCCATTGGTaGAGACAACCTGGGATGCTT | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQSLPHW*RQPGML Trigger: AAGCATCCCAGGTTGTCTTCACCAATGGGGAAGAGA...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | TCTCCTGCTGATGCAGCTTCATCCTTAAGGACGTTATCTCTTGCCGACAGAGTCTCTCTTCCCCATTGGTaGAGACAACCTGGGATGCTT | + |
Preference number: 4 (lower is better) Translates to: SPADAASSLRTLSLADRVSLPHW*RQPGML Trigger: AAGCATCCCAGGTTGTCTTCACCAATGGGGAAGAGA...GACTCTGTCGGCAAGAGATAACGTCCTTAAGGATGAAGCTGCATCAGCAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
CDS-3UTR TCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACAAAGTGGTTGTCCATTTaGAATGTAACTCCTGCTTTC | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTKWLSI*NVTPAF Trigger: GAAAGCAGGAGTTACATTTCAAATGGACAACCACTT...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAATCCAATCTCTTCCTTTaGGACTCTTCCCTCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQSNLFL*DSSLSS Trigger: GGAGCTGAGGGAAGAGTCTCAAAGGAAGAGATTGGA...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCCACCCAGCCAGTGTTTaGACAAAACCACAAGCTGCT | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSHPASV*TKPQAA Trigger: AGCAGCTTGTGGTTTTGTTCAAACACTGGCTGGGTG...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR GCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACATTTAACTCGAGGGCTTaGAATCCTGTTTTTCAGTGT | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTFNSRA*NPVFQC Trigger: ACACTGAAAAACAGGATTGCAAGCCCTCGAGTTAAA...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR GCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAATGCTTGCTCGGAGAGTaGAGATATGACCTTCCCCAA | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQCLLGE*RYDLPQ Trigger: TTGGGGAAGGTCATATCTGCACTCTCCGAGCAAGCA...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR GCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCTGCTTGCTCGGAGAGTaGAGATATGACCTTCCCCAA | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSCLLGE*RYDLPQ Trigger: TTGGGGAAGGTCATATCTGCACTCTCCGAGCAAGCA...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAAGCTGGGCTTTTCGGTaGAGGCAGGTCATGCCTTGG | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQSWAFR*RQVMPW Trigger: CCAAGGCATGACCTGCCTCCACCGAAAAGCCCAGCT...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR CCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACATTCCGATTGCTTCTCTaGGCAGCTTTTAACTTTTCA | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTFRLLL*AAFNFS Trigger: TGAAAAGTTAAAAGCTGCCCAGAGAAGCAATCGGAA...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCGACAACTGGATGTCATaGCTTGAGCTTGGTGTGTGC | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSDNWMS*LELGVC Trigger: GCACACACCAAGCTCAAGCCATGACATCCAGTTGTC...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | CTCCTCCTTCTAGAAAGGGAAGAAACTGGTGTGCTTGTAATGTCGGGCTCCCACTGTCCATCTGTGTTCTaGGACACATTTTACCGGGGT | + |
Preference number: 4 (lower is better) Translates to: LLLLEREETGVLVMSGSHCPSVF*DTFYRG Trigger: ACCCCGGTAAAATGTGTCCCAGAACACAGATGGACA...GTGGGAGCCCGACATTACAAGCACACCAGTTTCTTCCCTTTCTAGAAGGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 72 bp | AGTGCAGATATGACCTTCCCCAAAGTCAGCAAGGACTaGTTAATGCTCACACCTTCCTTCAGTCGCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: SADMTFPKVSKD*LMLTPSFSRCP Trigger: TGGGCAGCGACTGAAGGAAGGTGTGAGCATTAACAAGTCCTTGCTGACTTTGGGGAAGGTCATATCTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 72 bp | TCTCTGATCAACTTTGCATTCATGTCCTCGTTGACTTaGGCGATATTGACTATCAGGCGGGCTTGGGTGGCG | + |
Preference number: 4 (lower is better) Translates to: SLINFAFMSSLT*AILTIRRAWVA Trigger: CGCCACCCAAGCCCGCCTGATAGTCAATATCGCCAAAGTCAACGAGGACATGAATGCAAAGTTGATCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
CDS-3UTR TCA 90 bp | CTCCTCCTTCTAGAAAGGGAAGAAACTGGTGTGCTTGTAATGTCGGGCTCCCACGAGTGTGCTTTCTCGTaGGCTTTCCCTTTTATTTGC | + |
Preference number: 4 (lower is better) Translates to: LLLLEREETGVLVMSGSHECAFS*AFPFIC Trigger: GCAAATAAAAGGGAAAGCTCACGAGAAAGCACACTC...GTGGGAGCCCGACATTACAAGCACACCAGTTTCTTCCCTTTCTAGAAGGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
CDS-3UTR TCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATCTTCTCTCTTTTGCTaGAAGGCCTCACGCGCACCG | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQSSLFC*KASRAP Trigger: CGGTGCGCGTGAGGCCTTTCAGCAAAAGAGAGAAGA...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATCGGAGAGTGCAGATATaGCCTTCCCCAAAGTCAGCA | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDRRVQI*PSPKSA Trigger: TGCTGACTTTGGGGAAGGTCATATCTGCACTCTCCG...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAGCAGTCAGCCCTGTCTaGCTTGCACTGCTCTTCCTT | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQAVSPV*LALLFL Trigger: AAGGAAGAGCAGTGCAAGTCAGACAGGGCTGACTGC...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCTACTCTCTGAATCTCTaGCATGTCTCTCTCCTGCTG | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSYSLNL*HVSLLL Trigger: CAGCAGGAGAGAGACATGGCAGAGATTCAGAGAGTA...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCCTTGAGCTTGGTGTGTaGTTTCCAACTGTGGTCACT | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSLELGV*FPTVVT Trigger: AGTGACCACAGTTGGAAAGCACACACCAAGCTCAAG...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAATCCTTCGCCTTCAGCTaGGCATCTTTAATTTCTGCC | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQSFAFS*ASLISA Trigger: GGCAGAAATTAAAGATGCGCAGCTGAAGGCGAAGGA...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCCTGGGCCATCTCCTTTaGGATCTGAATTCCTTGCAT | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSLGHLL*DLNSLH Trigger: ATGCAAGGAATTCAGATCGCAAAGGAGATGGCCCAG...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAACTGGGCCATCTCCTTTaGGATCTGAATTCCTTGCAT | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQLGHLL*DLNSLH Trigger: ATGCAAGGAATTCAGATCGCAAAGGAGATGGCCCAG...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCACTTCCTGTTCAAGATaGTGCTTCGCCCTTTCCAAC | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSTSCSR*CFALSN Trigger: GTTGGAAAGGGCGAAGCAGCATCTTGAACAGGAAGT...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCGGGTACTGGAGACTTTaGTGCTGTTTTCCAGAACAC | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSGYWRL*CCFPEH Trigger: GTGTTCTGGAAAACAGCAGCAAAGTCTCCAGTACCC...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATAGCAGAGGCAGAGTGTaGGCTGAAGTCACTGTGAAG | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDSRGRV*AEVTVK Trigger: CTTCACAGTGACTTCAGCGCACACTCTGCCTCTGCT...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCACAGCCCTGTCTGACTTaGACTGCTCTTCCTTGCTAT | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSQPCLT*TALPCY Trigger: ATAGCAAGGAAGAGCAGTGCAAGTCAGACAGGGCTG...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATACCAACGGGAGGACCTaGGTCTTTGCATCTCGTCAA | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDTNGRT*VFASRQ Trigger: TTGACGAGATGCAAAGACCCAGGTCCTCCCGTTGGT...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAATACAGTTGTCTGGCTaGCATAGCCAGGGTGACATT | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQIQLSG*HSQGDI Trigger: AATGTCACCCTGGCTATGCCAGCCAGACAACTGTAT...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACATCTAGGAATTATTCCTaGTTCTTCATTAAGCCCCAT | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTSRNYS*FFIKPH Trigger: ATGGGGCTTAATGAAGAACCAGGAATAATTCCTAGA...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAACTTTGCTTCTCCAGCTaGGACAATACTCACTGTTCC | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQLCFSS*DNTHCS Trigger: GGAACAGTGAGTATTGTCCCAGCTGGAGAAGCAAAG...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATAAGGCACAAGCAACCTaGATGGTAAGAGCCTGTGCC | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDKAQAT*MVRACA Trigger: GGCACAGGCTCTTACCATCCAGGTTGCTTGTGCCTT...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CAA 72 bp | TCTACACCCAGCGAGAGGCCACACACAGGCATGGACTaGGAATATTTACACTCCTCTCTTTTTATGCTCTCC | + |
Preference number: 4 (lower is better) Translates to: STPSERPHTGMD*EYLHSSLFMLS Trigger: GGAGAGCATAAAAAGAGAGGAGTGTAAATATTCCAAGTCCATGCCTGTGTGTGGCCTCTCGCTGGGTGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CAA 72 bp | AACTTTGCATTCATGTCCTCGTTGACTTTGGCGATATaGACTATCAGGCGGGCTTGGGTGGCGTATCTGAGT | + |
Preference number: 4 (lower is better) Translates to: NFAFMSSLTLAI*TIRRAWVAYLS Trigger: ACTCAGATACGCCACCCAAGCCCGCCTGATAGTCAATATCGCCAAAGTCAACGAGGACATGAATGCAAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR TCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAGAGTTCCAGTTTGGCTaGATGGTGAAAGTTTTATCC | + |
Preference number: 4 (lower is better) Translates to: THGKSLTEPAQVTQAKILEFQFG*MVKVLS Trigger: GGATAAAACTTTCACCATTCAGCCAAACTGGAACTC...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCAATGGCATTGGCTTCCTaGATCATCGTGGAGAGTTTC | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSMALAS*IIVESF Trigger: GAAACTCTCCACGATGATTCAGGAAGCCAATGCCAT...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAGAGAACAGGTTATCTTaGCTTTCTTCATCCTGCTCT | + |
Preference number: 4 (lower is better) Translates to: THGKSLTEPAQVTQAKILENRLS*LSSSCS Trigger: AGAGCAGGATGAAGAAAGTCAAGATAACCTGTTCTC...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCATACTCTCTGAATCTCTaGCATGTCTCTCTCCTGCTG | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSYSLNL*HVSLLL Trigger: CAGCAGGAGAGAGACATGGCAGAGATTCAGAGAGTA...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCACGCATCTTTAATTTCTaGCTCAAGCCGAGACCTCTG | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSRIFNF*LKPRPL Trigger: CAGAGGTCTCGGCTTGAGGCAGAAATTAAAGATGCG...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACACTGATGCATCATGTCTaGCAAAAATATAGCACTTTT | + |
Preference number: 4 (lower is better) Translates to: DKEKQPRSHQGPASPMLTLMHHV*QKYSTF Trigger: AAAAGTGCTATATTTTTGGCAGACATGATGCATCAG...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCAGTACTGGCTTTCATCTaGTTAGTGACCTCCTCTCGT | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSVLAFI*LVTSSR Trigger: ACGAGAGGAGGTCACTAAGCAGATGAAAGCCAGTAC...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAAGCAGAGGCAGAGTGTaGGCTGAAGTCACTGTGAAG | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQSRGRV*AEVTVK Trigger: CTTCACAGTGACTTCAGCGCACACTCTGCCTCTGCT...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAGGCAGAGTCACTTCCTaGGTTACCTCCCACAGGATT | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQGRVTS*VTSHRI Trigger: AATCCTGTGGGAGGTAACCCAGGAAGTGACTCTGCC...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTATCCTGTTTTTCAGTGTaGATAAAGCTGGGCTTTTCG | + |
Preference number: 4 (lower is better) Translates to: THGKSLTEPAQVTQAKILSCFSV*IKLGFS Trigger: CGAAAAGCCCAGCTTTATCCACACTGAAAAACAGGA...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAATTGGTGAAGACAACCTaGGATGCTTTCTCAGTCTTC | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQLVKTT*DAFSVF Trigger: GAAGACTGAGAAAGCATCCCAGGTTGTCTTCACCAA...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | CTTCTGCTCCTCCTTCTAGAAAGGGAAGAAACTGGTGTGCTTGTAATGTCGGGCTTGGTGAAGACAACCTaGGATGCTTTCTCAGTCTTC | + |
Preference number: 4 (lower is better) Translates to: LLLLLLEREETGVLVMSGLVKTT*DAFSVF Trigger: GAAGACTGAGAAAGCATCCCAGGTTGTCTTCACCAA...GCCCGACATTACAAGCACACCAGTTTCTTCCCTTTCTAGAAGGAGGAGCAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR CCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCAATACAGTTGTCTGGCTaGCATAGCCAGGGTGACATT | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSIQLSG*HSQGDI Trigger: AATGTCACCCTGGCTATGCCAGCCAGACAACTGTAT...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAATGTGCTTTCCAACTGTaGTCACTCCTTCCTTTACCA | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQCAFQL*SLLPLP Trigger: TGGTAAAGGAAGGAGTGACCACAGTTGGAAAGCACA...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCTGTGCTTTCCAACTGTaGTCACTCCTTCCTTTACCA | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSCAFQL*SLLPLP Trigger: TGGTAAAGGAAGGAGTGACCACAGTTGGAAAGCACA...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCAGTTGAGATCCCAAGCTaGAGGTTACGAACTCGAACA | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSVEIPS*RLRTRT Trigger: TGTTCGAGTTCGTAACCTCCAGCTTGGGATCTCAAC...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCAGAGTGTGCTTTCTCGTaGGCTTTCCCTTTTATTTGC | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSECAFS*AFPFIC Trigger: GCAAATAAAAGGGAAAGCTCACGAGAAAGCACACTC...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCAATCATGGCTGTTTTTaGATTTCCACCCAGGCTTTC | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSNHGCF*ISTQAF Trigger: GAAAGCCTGGGTGGAAATTCAAAAACAGCCATGATT...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTACTGCTTTCAACTCTCTaGTCAACTTTGCATTCATGT | + |
Preference number: 4 (lower is better) Translates to: THGKSLTEPAQVTQAKILLLSTL*STLHSC Trigger: ACATGAATGCAAAGTTGATCAGAGAGTTGAAAGCAG...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATTCCTTCCATACTCTCTaGATCTCTGCCATGTCTCTC | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDSFHTL*ISAMSL Trigger: GAGAGACATGGCAGAGATTCAGAGAGTATGGAAGGA...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAATCTCCTTTGCGATCTaGATTCCTTGCATCATTTCT | + |
Preference number: 4 (lower is better) Translates to: THGKSLTEPAQVTQAKILISFAI*IPCIIS Trigger: AGAAATGATGCAAGGAATTCAGATCGCAAAGGAGAT...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCTTTCCCCGATTCTCCTaGAGCATTTGTACTTCTTCA | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSFPRFS*SICTSS Trigger: TGAAGAAGTACAAATGCTTCAGGAGAATCGGGGAAA...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAAGTTTGGCTGAATGGTaGAAGTTTTATCCCTGTTTC | + |
Preference number: 4 (lower is better) Translates to: THGKSLTEPAQVTQAKILSLAEW*KFYPCF Trigger: GAAACAGGGATAAAACTTTCACCATTCAGCCAAACT...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR GCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCCCTAAGACTTGTGTCTaGTGTTCTTCTGTTTCCCAA | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSPKTCV*CSSVSQ Trigger: TTGGGAAACAGAAGAACAGCAGACACAAGTCTTAGG...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR GCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTATTTAACTCGAGGGCTTaGAATCCTGTTTTTCAGTGT | + |
Preference number: 4 (lower is better) Translates to: THGKSLTEPAQVTQAKILFNSRA*NPVFQC Trigger: ACACTGAAAAACAGGATTGCAAGCCCTCGAGTTAAA...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATCGCATCTTTAATTTCTaGCTCAAGCCGAGACCTCTG | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDRIFNF*LKPRPL Trigger: CAGAGGTCTCGGCTTGAGGCAGAAATTAAAGATGCG...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR GCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCAAGTGTGAAGACTGCATaGTCTGAATCGGATGGATGT | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSSVKTA*SESDGC Trigger: ACATCCATCCGATTCAGAGCATGCAGTCTTCACACT...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCAGCCAATCAATTCTTTaGAAATCCCGGGAAGAAAGG | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSSQSIL*KSREER Trigger: CCTTTCTTCCCGGGATTTGCAAAGAATTGATTGGCT...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR GCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATGGGTACTGGAGACTTTaGTGCTGTTTTCCAGAACAC | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDGYWRL*CCFPEH Trigger: GTGTTCTGGAAAACAGCAGCAAAGTCTCCAGTACCC...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAGACAACTGGATGTCATaGCTTGAGCTTGGTGTGTGC | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQDNWMS*LELGVC Trigger: GCACACACCAAGCTCAAGCCATGACATCCAGTTGTC...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATAGCACTCCAGACAACTaGATGTCATGGCTTGAGCTT | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDSTPDN*MSWLEL Trigger: AAGCTCAAGCCATGACATCCAGTTGTCTGGAGTGCT...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CAA 72 bp | TACACTAATAGATTACTGGAGCTGCCGCCCACCGCATaGATGGATAAGAGCAATACGTTAGAAAAGCCCCCA | + |
Preference number: 4 (lower is better) Translates to: YTNRLLELPPTA*MDKSNTLEKPP Trigger: TGGGGGCTTTTCTAACGTATTGCTCTTATCCATCAATGCGGTGGGCGGCAGCTCCAGTAATCTATTAGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CAA 72 bp | GAGCCAGTACAAGGTAGAAAATCACCCAGCCAGTGTTaGAACAAAACCACAAGCTGCTCAAAGGCACAAGCA | + |
Preference number: 4 (lower is better) Translates to: EPVQGRKSPSQC*NKTTSCSKAQA Trigger: TGCTTGTGCCTTTGAGCAGCTTGTGGTTTTGTTCAAACACTGGCTGGGTGATTTTCTACCTTGTACTGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR TCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCTTCACGAATGGATCATaGTTCTCACACTCTGACATA | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSFTNGS*FSHSDI Trigger: TATGTCAGAGTGTGAGAATCATGATCCATTCGTGAA...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTATCTGTAAAGGTCTTCTaGACTAGACTGTTTTCTTCT | + |
Preference number: 4 (lower is better) Translates to: THGKSLTEPAQVTQAKILSVKVF*TRLFSS Trigger: AGAAGAAAACAGTCTAGTTCAGAAGACCTTTACAGA...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAAAGTGGTTGTCCATTTaGAATGTAACTCCTGCTTTC | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQKWLSI*NVTPAF Trigger: GAAAGCAGGAGTTACATTTCAAATGGACAACCACTT...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAATGGCATTGGCTTCCTaGATCATCGTGGAGAGTTTC | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQMALAS*IIVESF Trigger: GAAACTCTCCACGATGATTCAGGAAGCCAATGCCAT...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAACTTGAGCTTGGTGTGTaGTTTCCAACTGTGGTCACT | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQLELGV*FPTVVT Trigger: AGTGACCACAGTTGGAAAGCACACACCAAGCTCAAG...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAGTTTACATATGTCTTTaGTTCTCCAGCTGGGACAAT | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQVYICL*FSSWDN Trigger: ATTGTCCCAGCTGGAGAAGCAAAGACATATGTAAAC...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATCTAGGGCCTGGATTTTaGGCTCATACACAGCTTTTT | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDLGPGF*AHTQLF Trigger: AAAAAGCTGTGTATGAGCGCAAAATCCAGGCCCTAG...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATAGTGTGAAGACTGCATaGTCTGAATCGGATGGATGT | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDSVKTA*SESDGC Trigger: ACATCCATCCGATTCAGAGCATGCAGTCTTCACACT...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCATACTGGAGACTTTGCTaGTGTTTTCCAGAACACAGA | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSYWRLC*CFPEHR Trigger: TCTGTGTTCTGGAAAACAGCAGCAAAGTCTCCAGTA...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAGTACTGGCTTTCATCTaGTTAGTGACCTCCTCTCGT | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQVLAFI*LVTSSR Trigger: ACGAGAGGAGGTCACTAAGCAGATGAAAGCCAGTAC...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATTTGGTGAAGACAACCTaGGATGCTTTCTCAGTCTTC | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDLVKTT*DAFSVF Trigger: GAAGACTGAGAAAGCATCCCAGGTTGTCTTCACCAA...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCTTCCGATTGCTTCTCTaGGCAGCTTTTAACTTTTCA | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSFRLLL*AAFNFS Trigger: TGAAAAGTTAAAAGCTGCCCAGAGAAGCAATCGGAA...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCAGAGATTGACAAGGTTTaGCAAGTGGTTGTCCATTTG | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSEIDKV*QVVVHL Trigger: CAAATGGACAACCACTTGCCAAACCTTGTCAATCTC...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCCATGGAGTTCCAGTTTaGCTGAATGGTGAAAGTTTT | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSHGVPV*LNGESF Trigger: AAAACTTTCACCATTCAGCCAAACTGGAACTCCATG...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAGTTGAGATCCCAAGCTaGAGGTTACGAACTCGAACA | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQVEIPS*RLRTRT Trigger: TGTTCGAGTTCGTAACCTCCAGCTTGGGATCTCAAC...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATCATCCTGCTCTTCATaGGCTTTGGAGATGGCAATC | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQSSCSS*ALEMAI Trigger: GATTGCCATCTCCAAAGCCCATGAAGAGCAGGATGA...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CAA 72 bp | TTCAACTCTCTGATCAACTTTGCATTCATGTCCTCGTaGACTTTGGCGATATTGACTATCAGGCGGGCTTGG | + |
Preference number: 4 (lower is better) Translates to: FNSLINFAFMSS*TLAILTIRRAW Trigger: CCAAGCCCGCCTGATAGTCAATATCGCCAAAGTCAACGAGGACATGAATGCAAAGTTGATCAGAGAGTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 72 bp | TTTGCGCTCATACACAGCTTTTTGGGAAGAAAGTTCTaGCTGGGCCATCTCCTTTGCGATCTGAATTCCTTG | + |
Preference number: 4 (lower is better) Translates to: FALIHSFLGRKF*LGHLLCDLNSL Trigger: CAAGGAATTCAGATCGCAAAGGAGATGGCCCAGCAAGAACTTTCTTCCCAAAAAGCTGTGTATGAGCGCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 72 bp | CAGCTTGGAAACTTGTTGTCTAGAACCTTCTTGTGCTaGAGTTCTGAAGCTTTTCGTCCTCCATTCAGCGAC | + |
Preference number: 4 (lower is better) Translates to: QLGNLLSRTFLC*SSEAFRPPFSD Trigger: GTCGCTGAATGGAGGACGAAAAGCTTCAGAACTCAAGCACAAGAAGGTTCTAGACAACAAGTTTCCAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR TCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCAGCAATCACCCCATTATaGAGCCTAAGGAGATTATTT | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSAITPL*SLRRLF Trigger: AAATAATCTCCTTAGGCTTCATAATGGGGTGATTGC...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATGAGAACAGGTTATCTTaGCTTTCTTCATCCTGCTCT | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDENRLS*LSSSCS Trigger: AGAGCAGGATGAAGAAAGTCAAGATAACCTGTTCTC...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCTTCATGACTTTGTTTTaGGCCTCTTTAACCATCGAT | + |
Preference number: 4 (lower is better) Translates to: YSSETSAQAIALRQMQSSFMTLF*ASLTID Trigger: ATCGATGGTTAAAGAGGCTCAAAACAAAGTCATGAA...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATCCTAAGACTTGTGTCTaGTGTTCTTCTGTTTCCCAA | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDPKTCV*CSSVSQ Trigger: TTGGGAAACAGAAGAACAGCAGACACAAGTCTTAGG...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR CCA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCATCATACACAGCTTTTTaGGAAGAAAGTTCTTGCTGG | + |
Preference number: 4 (lower is better) Translates to: LSKFKEAQRSGRILPRTSSYTAF*EESSCW Trigger: CCAGCAAGAACTTTCTTCCCAAAAAGCTGTGTATGA...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR CCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATCGTGGAGAGTTTCATaGAGTTCCAGTTTGGCTGAA | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQSWRVS*SSSLAE Trigger: TTCAGCCAAACTGGAACTCCATGAAACTCTCCACGA...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATCTGCTTTCAACTCTCTaGTCAACTTTGCATTCATGT | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDLLSTL*STLHSC Trigger: ACATGAATGCAAAGTTGATCAGAGAGTTGAAAGCAG...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATATCTCCTTTGCGATCTaGATTCCTTGCATCATTTCT | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDISFAI*IPCIIS Trigger: AGAAATGATGCAAGGAATTCAGATCGCAAAGGAGAT...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATTTCCCCGATTCTCCTaGAGCATTTGTACTTCTTCA | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQFPRFS*SICTSS Trigger: TGAAGAAGTACAAATGCTTCAGGAGAATCGGGGAAA...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR TCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATAGTTTGGCTGAATGGTaGAAGTTTTATCCCTGTTTC | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDSLAEW*KFYPCF Trigger: GAAACAGGGATAAAACTTTCACCATTCAGCCAAACT...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATGCAATCACCCCATTATaGAGCCTAAGGAGATTATTT | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDAITPL*SLRRLF Trigger: AAATAATCTCCTTAGGCTTCATAATGGGGTGATTGC...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAACTGATGCATCATGTCTaGCAAAAATATAGCACTTTT | + |
Preference number: 4 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQLMHHV*QKYSTF Trigger: AAAAGTGCTATATTTTTGGCAGACATGATGCATCAG...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR GCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATACTGGAGACTTTGCTaGTGTTTTCCAGAACACAGA | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQYWRLC*CFPEHR Trigger: TCTGTGTTCTGGAAAACAGCAGCAAAGTCTCCAGTA...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATCCTGTTTTTCAGTGTaGATAAAGCTGGGCTTTTCG | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQSCFSV*IKLGFS Trigger: CGAAAAGCCCAGCTTTATCCACACTGAAAAACAGGA...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CCA 90 bp | ATGAAATATCCGAACAGCATCCCTGCAAAAACAATTGCAAATAGCCTCCGAGTTATACAGTTGTCTGGCTaGCATAGCCAGGGTGACATT | + |
Preference number: 4 (lower is better) Translates to: MKYPNSIPAKTIANSLRVIQLSG*HSQGDI Trigger: AATGTCACCCTGGCTATGCCAGCCAGACAACTGTAT...AACTCGGAGGCTATTTGCAATTGTTTTTGCAGGGATGCTGTTCGGATATTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 72 bp | ACTCCTAGATATCCACAATTCACAGATCGACCAGCTTaGCCCTATCAATATGCCTCACCCAATGGGATATTA | + |
Preference number: 4 (lower is better) Translates to: TPRYPQFTDRPA*PYQYASPNGIL Trigger: TAATATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATATCTAGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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3UTR CAA 72 bp | AGCTCTGAATATCAGAGTAAGAACTCACAACATTCATaGACAGGCCTTCAACATACGGTCCAGAAACAGGGT | + |
Preference number: 4 (lower is better) Translates to: SSEYQSKNSQHS*TGLQHTVQKQG Trigger: ACCCTGTTTCTGGACCGTATGTTGAAGGCCTGTCAATGAATGTTGTGAGTTCTTACTCTGATATTCAGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR TCA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATTCTGTAAAGGTCTTCTaGACTAGACTGTTTTCTTCT | + |
Preference number: 4 (lower is better) Translates to: TIHRSTSFALSICLTQWDSVKVF*TRLFSS Trigger: AGAAGAAAACAGTCTAGTTCAGAAGACCTTTACAGA...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | AGAAAATCACCCAGCCAGTGTTTGAACAAAACCACAAGCTGCTCAAAGGCACAATCTGTAAAGGTCTTCTaGACTAGACTGTTTTCTTCT | + |
Preference number: 4 (lower is better) Translates to: RKSPSQCLNKTTSCSKAQSVKVF*TRLFSS Trigger: AGAAGAAAACAGTCTAGTTCAGAAGACCTTTACAGA...TTGTGCCTTTGAGCAGCTTGTGGTTTTGTTCAAACACTGGCTGGGTGATTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR TCA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATTCATGACTTTGTTTTaGGCCTCTTTAACCATCGAT | + |
Preference number: 4 (lower is better) Translates to: ISTIHRSTSFALSICLTQFMTLF*ASLTID Trigger: ATCGATGGTTAAAGAGGCTCAAAACAAAGTCATGAA...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR TCA 90 bp | TACATATGTCTTTGCTTCTCCAGCTGGGACAATACTCACTGTTCCTCCAAAATTTTTCAAGATGGTAGCTaGCGTATAGGACTTTCCAGA | + |
Preference number: 4 (lower is better) Translates to: YICLCFSSWDNTHCSSKIFQDGS*RIGLSR Trigger: TCTGGAAAGTCCTATACGTCAGCTACCATCTTGAAA...AATTTTGGAGGAACAGTGAGTATTGTCCCAGCTGGAGAAGCAAAGACATATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR GCA 90 bp | TTTCCATTAATCCAGATGAGTGTGAAGACTGCATGCTCTGAATCGGATGGATGTTTTAACTCGAGGGCTTaGAATCCTGTTTTTCAGTGT | + |
Preference number: 4 (lower is better) Translates to: FPLIQMSVKTACSESDGCFNSRA*NPVFQC Trigger: ACACTGAAAAACAGGATTGCAAGCCCTCGAGTTAAA...ACATCCATCCGATTCAGAGCATGCAGTCTTCACACTCATCTGGATTAATGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 72 bp | TTTTCTCTTCATCGAAACTCTGTCCGAGGAAATCTATaGATGAGCCAATCAATTCTTTGCAAATCCCGGGAA | + |
Preference number: 4 (lower is better) Translates to: FSLHRNSVRGNL*MSQSILCKSRE Trigger: TTCCCGGGATTTGCAAAGAATTGATTGGCTCATCAATAGATTTCCTCGGACAGAGTTTCGATGAAGAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR TCA 90 bp | CTGATGAATTTGAGTAAATGGTGCTCGGTTTTTCCATTAATCCAGATGAGTGTGTTCACGAATGGATCATaGTTCTCACACTCTGACATA | + |
Preference number: 4 (lower is better) Translates to: LMNLSKWCSVFPLIQMSVFTNGS*FSHSDI Trigger: TATGTCAGAGTGTGAGAATCATGATCCATTCGTGAA...CACACTCATCTGGATTAATGGAAAAACCGAGCACCATTTACTCAAATTCATCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 72 bp | TCTTTTGCTTTTCAATTTCTAAAGCTTCTAAGATCCTaGCATGTCGGATTCTATGGTCTTCTAAGGCCTGCT | + |
Preference number: 4 (lower is better) Translates to: SFAFQFLKLLRS*HVGFYGLLRPA Trigger: AGCAGGCCTTAGAAGACCATAGAATCCGACATGCAAGGATCTTAGAAGCTTTAGAAATTGAAAAGCAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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3UTR CAA 72 bp | CACTCATCCTTATATCAGTTACTGTGGAAACCAGTGTaGGTAGATATACTATTAAACACATCATGCTTCAAG | + |
Preference number: 4 (lower is better) Translates to: HSSLYQLLWKPV*VDILLNTSCFK Trigger: CTTGAAGCATGATGTGTTTAATAGTATATCTACCAACACTGGTTTCCACAGTAACTGATATAAGGATGAGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAGGAGGACCTGGGTCTTaGCATCTCGTCAACCCGGTG | + |
Preference number: 5 (lower is better) Translates to: HGSADHGRECCSPISPHRGGPGS*HLVNPV Trigger: CACCGGGTTGACGAGATGCAAAGACCCAGGTCCTCC...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAACTGGGGTATCAGACTaGCTCTCGGTCAGTTGCACC | + |
Preference number: 5 (lower is better) Translates to: HGSADHGRECCSPISPHRTGVSD*LSVSCT Trigger: GGTGCAACTGACCGAGAGCAAGTCTGATACCCCAGT...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAGAGGCAGGTCATGCCTaGGTGTCCATCTGTGTTCTG | + |
Preference number: 5 (lower is better) Translates to: HGSADHGRECCSPISPHREAGHA*VSICVL Trigger: CAGAACACAGATGGACACCAAGGCATGACCTGCCTC...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189413.7 |
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CDS CCA 90 bp | CAGAATGAGACCGGGAGCTTTTATCGTTCATGCCGGTGGCCGCCGTaGCTCTCTGTTTATTTCCCAGTTCCAGCCAGCTTGGTTGTTTCC | + |
Preference number: 5 (lower is better) Translates to: QNETGSFYRSCRWPP*LSVYFPVPASLVVS Trigger: GGAAACAACCAAGCTGGCTGGAACTGGGAAATAAACAGAGAGCCACGGCGGCCACCGGCATGAACGATAAAAGCTCCCGGTCTCATTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195274.3 |
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CDS-3UTR CAA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAAGCGTTTCCTCTATGTaGCTGGCAGCGGGACTGACG | + |
Preference number: 5 (lower is better) Translates to: THGKSLTEPAQVTQAKILSVSSM*LAAGLT Trigger: CGTCAGTCCCGCTGCCAGCAACATAGAGGAAACGCT...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACATGTCATGGCTTGAGCTaGGTGTGTGCTTTCCAACTG | + |
Preference number: 5 (lower is better) Translates to: DKEKQPRSHQGPASPMLTCHGLS*VCAFQL Trigger: CAGTTGGAAAGCACACACCAAGCTCAAGCCATGACA...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACATTGGGAAGAAAGTTCTaGCTGGGCCATCTCCTTTGC | + |
Preference number: 5 (lower is better) Translates to: DKEKQPRSHQGPASPMLTLGRKF*LGHLLC Trigger: GCAAAGGAGATGGCCCAGCAAGAACTTTCTTCCCAA...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACATCCAGAACACAGAGCTaGCTCCCTTTCAGAACAGCT | + |
Preference number: 5 (lower is better) Translates to: DKEKQPRSHQGPASPMLTSRTQS*LPFRTA Trigger: AGCTGTTCTGAAAGGGAGCAAGCTCTGTGTTCTGGA...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS CCA 90 bp | ACCCTTTGCTTCTGTCCTCGATGCCTGGGAGGCAGAGTCACTTCCTaGGTTACCTCCCACAGGATTCAATGTCTCCCACTTTCCCACATA | + |
Preference number: 5 (lower is better) Translates to: TLCFCPRCLGGRVTS*VTSHRIQCLPLSHI Trigger: TATGTGGGAAAGTGGGAGACATTGAATCCTGTGGGAGGTAACCCAGGAAGTGACTCTGCCTCCCAGGCATCGAGGACAGAAGCAAAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS-3UTR CAA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCAGCGTTTCCTCTATGTaGCTGGCAGCGGGACTGACG | + |
Preference number: 5 (lower is better) Translates to: YSSETSAQAIALRQMQSSSVSSM*LAAGLT Trigger: CGTCAGTCCCGCTGCCAGCAACATAGAGGAAACGCT...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGATCCCTGCAAAAACAATaGCAAATAGCCTCCGAGTTT | + |
Preference number: 5 (lower is better) Translates to: HGSADHGRECCSPISPHRSLQKQ*QIASEF Trigger: AAACTCGGAGGCTATTTGCAATTGTTTTTGCAGGGA...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS GCA 90 bp | TCTCACACTCTGACATATCTGCCTTCAAGTGCAGTTCCAGCCGGCTaGTGTGGACGAGGCCACTGGATGCTGAAATCTTCTGTGAAGAAG | + |
Preference number: 5 (lower is better) Translates to: SHTLTYLPSSAVPAG*CGRGHWMLKSSVKK Trigger: CTTCTTCACAGAAGATTTCAGCATCCAGTGGCCTCGTCCACAGCAGCCGGCTGGAACTGCACTTGAAGGCAGATATGTCAGAGTGTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS GCA 90 bp | CAGGACACGGGTATCATTATTTACACCCTTTGCTTCTGTCCTCGATaGCTGGGAGGCAGAGTCACTTCCTGGGTTACCTCCCACAGGATT | + |
Preference number: 5 (lower is better) Translates to: QDTGIIIYTLCFCPR*LGGRVTSWVTSHRI Trigger: AATCCTGTGGGAGGTAACCCAGGAAGTGACTCTGCCTCCCAGGCATCGAGGACAGAAGCAAAGGGTGTAAATAATGATACCCGTGTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS CCA 90 bp | CACTCTGACATATCTGCCTTCAAGTGCAGTTCCAGCCGGCTGCTGTaGACGAGGCCACTGGATGCTGAAATCTTCTGTGAAGAAGAAACC | + |
Preference number: 5 (lower is better) Translates to: HSDISAFKCSSSRLL*TRPLDAEIFCEEET Trigger: GGTTTCTTCTTCACAGAAGATTTCAGCATCCAGTGGCCTCGTCCACAGCAGCCGGCTGGAACTGCACTTGAAGGCAGATATGTCAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS CCA 90 bp | GTCCTTAACTGTCACCTTTTCATTAGAGGCACCAACGGGAGGACCTaGGTCTTTGCATCTCGTCAACCCGGTGTCGTTGGAGTCTTTCAC | + |
Preference number: 5 (lower is better) Translates to: VLNCHLFIRGTNGRT*VFASRQPGVVGVFH Trigger: GTGAAAGACTCCAACGACACCGGGTTGACGAGATGCAAAGACCCAGGTCCTCCCGTTGGTGCCTCTAATGAAAAGGTGACAGTTAAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS-3UTR CAA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATGGAGGACCTGGGTCTTaGCATCTCGTCAACCCGGTG | + |
Preference number: 5 (lower is better) Translates to: TIHRSTSFALSICLTQWDGGPGS*HLVNPV Trigger: CACCGGGTTGACGAGATGCAAAGACCCAGGTCCTCC...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCACTGGGGTATCAGACTaGCTCTCGGTCAGTTGCACC | + |
Preference number: 5 (lower is better) Translates to: YSSETSAQAIALRQMQSSTGVSD*LSVSCT Trigger: GGTGCAACTGACCGAGAGCAAGTCTGATACCCCAGT...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GGCTTGAGCTTGGTGTGTGCTTTCCAACTGTGGTCACTCCTTCCTTTACCATGTACTGGGGTATCAGACTaGCTCTCGGTCAGTTGCACC | + |
Preference number: 5 (lower is better) Translates to: GLSLVCAFQLWSLLPLPCTGVSD*LSVSCT Trigger: GGTGCAACTGACCGAGAGCAAGTCTGATACCCCAGT...ACATGGTAAAGGAAGGAGTGACCACAGTTGGAAAGCACACACCAAGCTCAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR CAA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTATCAGTCTTCTCTCTTTaGCTGAAAGGCCTCACGCGC | + |
Preference number: 5 (lower is better) Translates to: THGKSLTEPAQVTQAKILSVFSL*LKGLTR Trigger: GCGCGTGAGGCCTTTCAGCAAAAGAGAGAAGACTGA...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCTCCACCACCTCTGTCTaGGTCTGTGTCATCACCAGG | + |
Preference number: 5 (lower is better) Translates to: YSSETSAQAIALRQMQSSSTTSV*VCVITR Trigger: CCTGGTGATGACACAGACCAAGACAGAGGTGGTGGA...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | CACGGCTCAGCCGACCACGGGAGAGAGTGCTGCTCTCCTATCTCTCCCCATAGAATTCTCCTGAAGCATTaGTACTTCTTCAGCGATCTT | + |
Preference number: 5 (lower is better) Translates to: HGSADHGRECCSPISPHRILLKH*YFFSDL Trigger: AAGATCGCTGAAGAAGTACAAATGCTTCAGGAGAAT...TCTATGGGGAGAGATAGGAGAGCAGCACTCTCTCCCGTGGTCGGCTGAGCCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS TCA 90 bp | TCGGTCAGTTGCACCACTAAGTGTCCTGATCTCATAGCTTCAGTCTaGCGCTGGGAACCCACAGGCGCTCTACTGTTTGTGTCCTTAACT | + |
Preference number: 5 (lower is better) Translates to: SVSCTTKCPDLIASV*RWEPTGALLFVSLT Trigger: AGTTAAGGACACAAACAGTAGAGCGCCTGTGGGTTCCCAGCGTCAGACTGAAGCTATGAGATCAGGACACTTAGTGGTGCAACTGACCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS TCA 90 bp | TTCTCTCTTTTGCTGAAAGGCCTCACGCGCACCGCCACGGTCACCTaGCTGTTCTCTACTTTTAAGGAGTCTGGCTCTGTAAAGGTCTTC | + |
Preference number: 5 (lower is better) Translates to: FSLLLKGLTRTATVT*LFSTFKESGSVKVF Trigger: GAAGACCTTTACAGAGCCAGACTCCTTAAAAGTAGAGAACAGTCAGGTGACCGTGGCGGTGCGCGTGAGGCCTTTCAGCAAAAGAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS TCA 90 bp | TGTCCATCTGTGTTCTGGGACACATTTTACCGGGGTCCTCGATTCTaGGCTCGCGCTTCTGAATGTACTGCCATGTTTCGGGATGTCCTT | + |
Preference number: 5 (lower is better) Translates to: CPSVFWDTFYRGPRF*ARASECTAMFRDVL Trigger: AAGGACATCCCGAAACATGGCAGTACATTCAGAAGCGCGAGCTCAGAATCGAGGACCCCGGTAAAATGTGTCCCAGAACACAGATGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS-3UTR CAA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCATCCACCACCTCTGTCTaGGTCTGTGTCATCACCAGG | + |
Preference number: 5 (lower is better) Translates to: LSKFKEAQRSGRILPRTSSTTSV*VCVITR Trigger: CCTGGTGATGACACAGACCAAGACAGAGGTGGTGGA...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACAAGGACTCTGATGAATTaGAGTAAATGGTGCTCGGTT | + |
Preference number: 5 (lower is better) Translates to: DKEKQPRSHQGPASPMLTRTLMN*SKWCSV Trigger: AACCGAGCACCATTTACTCAAATTCATCAGAGTCCT...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACATCCCTGCAAAAACAATaGCAAATAGCCTCCGAGTTT | + |
Preference number: 5 (lower is better) Translates to: DKEKQPRSHQGPASPMLTSLQKQ*QIASEF Trigger: AAACTCGGAGGCTATTTGCAATTGTTTTTGCAGGGA...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | TGCTTTGTGGCCAGGGTCTCCATCTCCAGTCGCCTTTTGTTCACGTACACTTCCGCAAAAAGAGAACTTTaGGGCCTCGGTTTAACTCGA | + |
Preference number: 5 (lower is better) Translates to: CFVARVSISSRLLFTYTSAKREL*GLGLTR Trigger: TCGAGTTAAACCGAGGCCCAAAAGTTCTCTTTTTGC...GGAAGTGTACGTGAACAAAAGGCGACTGGAGATGGAGACCCTGGCCACAAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
CDS-3UTR CAA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCATCAGTCTTCTCTCTTTaGCTGAAAGGCCTCACGCGC | + |
Preference number: 5 (lower is better) Translates to: LSKFKEAQRSGRILPRTSSVFSL*LKGLTR Trigger: GCGCGTGAGGCCTTTCAGCAAAAGAGAGAAGACTGA...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR CAA 90 bp | TGTGCGTCCCGTTTACATATGTCTTTGCTTCTCCAGCTGGGACAATACTCACTGTCAGTCTTCTCTCTTTaGCTGAAAGGCCTCACGCGC | + |
Preference number: 5 (lower is better) Translates to: CASRLHMSLLLQLGQYSLSVFSL*LKGLTR Trigger: GCGCGTGAGGCCTTTCAGCAAAAGAGAGAAGACTGA...CAGTGAGTATTGTCCCAGCTGGAGAAGCAAAGACATATGTAAACGGGACGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
||
CDS-3UTR CAA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCAAAACCCTCTTTCCGTTaGCTTGCTCGGAGAGTGCAG | + |
Preference number: 5 (lower is better) Translates to: LSKFKEAQRSGRILPRTSKPSFR*LARRVQ Trigger: CTGCACTCTCCGAGCAAGCAAACGGAAAGAGGGTTT...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR CAA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAGGGTCAATGTTCCGATaGCTTCTCTGGGCAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQGSMFR*LLWAAF Trigger: AAAAGCTGCCCAGAGAAGCAATCGGAACATTGACCC...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAATGTCATGGCTTGAGCTaGGTGTGTGCTTTCCAACTG | + |
Preference number: 5 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQCHGLS*VCAFQL Trigger: CAGTTGGAAAGCACACACCAAGCTCAAGCCATGACA...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR CAA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAACTGGATGTCATGGCTaGAGCTTGGTGTGTGCTTTC | + |
Preference number: 5 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQTGCHG*SLVCAF Trigger: GAAAGCACACACCAAGCTCAAGCCATGACATCCAGT...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GACAAAGAGAAGCAACCTAGGTCCCACCAGGGCCCAGCAAGCCCCATGCTTACACTTCATGACTTTGTTTaGAGCCTCTTTAACCATCGA | + |
Preference number: 5 (lower is better) Translates to: DKEKQPRSHQGPASPMLTLHDFV*SLFNHR Trigger: TCGATGGTTAAAGAGGCTCAAAACAAAGTCATGAAG...TGTAAGCATGGGGCTTGCTGGGCCCTGGTGGGACCTAGGTTGCTTCTCTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
||
CDS-3UTR CAA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTATGGGTACTGGAGACTTaGCTGCTGTTTTCCAGAACA | + |
Preference number: 5 (lower is better) Translates to: THGKSLTEPAQVTQAKILWVLET*LLFSRT Trigger: TGTTCTGGAAAACAGCAGCAAAGTCTCCAGTACCCA...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ATGGACGGTCTCCAAGTGCACAATGGTTTCATACCCACTGAATCCTATTCGGGGGTTATCTCTTCCCCATaGGTGAAGACAACCTGGGAT | + |
Preference number: 5 (lower is better) Translates to: MDGLQVHNGFIPTESYSGVISSP*VKTTWD Trigger: ATCCCAGGTTGTCTTCACCAATGGGGAAGAGATAAC...CCCCGAATAGGATTCAGTGGGTATGAAACCATTGTGCACTTGGAGACCGTCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR CAA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAAAAGTCAGCAAGGACTaGTTAATGCTCACACCTTCC | + |
Preference number: 5 (lower is better) Translates to: THGKSLTEPAQVTQAKILKVSKD*LMLTPS Trigger: GGAAGGTGTGAGCATTAACAAGTCCTTGCTGACTTT...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCAGGGTCAATGTTCCGATaGCTTCTCTGGGCAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: LSKFKEAQRSGRILPRTSGSMFR*LLWAAF Trigger: AAAAGCTGCCCAGAGAAGCAATCGGAACATTGACCC...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAGGGTCTTCATTGAGATaGACAAGGTTTGGCAAGTGG | + |
Preference number: 5 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQGSSLR*TRFGKW Trigger: CCACTTGCCAAACCTTGTCAATCTCAATGAAGACCC...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCATTGGGAAGAAAGTTCTaGCTGGGCCATCTCCTTTGC | + |
Preference number: 5 (lower is better) Translates to: LSKFKEAQRSGRILPRTSLGRKF*LGHLLC Trigger: GCAAAGGAGATGGCCCAGCAAGAACTTTCTTCCCAA...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCACTCCAATCTCTTCCTTaGAGACTCTTCCCTCAGCTC | + |
Preference number: 5 (lower is better) Translates to: LSKFKEAQRSGRILPRTSLQSLP*RLFPQL Trigger: GAGCTGAGGGAAGAGTCTCAAAGGAAGAGATTGGAG...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAGAGCCAATCAATTCTTaGCAAATCCCGGGAAGAAAG | + |
Preference number: 5 (lower is better) Translates to: THGKSLTEPAQVTQAKILEPINS*QIPGRK Trigger: CTTTCTTCCCGGGATTTGCAAAGAATTGATTGGCTC...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAATGGGTACTGGAGACTTaGCTGCTGTTTTCCAGAACA | + |
Preference number: 5 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQWVLET*LLFSRT Trigger: TGTTCTGGAAAACAGCAGCAAAGTCTCCAGTACCCA...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAACATTATTTACACCCTTaGCTTCTGTCCTCGATGCCT | + |
Preference number: 5 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQHYLHP*LLSSMP Trigger: AGGCATCGAGGACAGAAGCAAAGGGTGTAAATAATG...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAATTTCACTGGGGTTCTaGTATCTGAGCTTCCAAATG | + |
Preference number: 5 (lower is better) Translates to: THGKSLTEPAQVTQAKILISLGF*YLSFQM Trigger: CATTTGGAAGCTCAGATACAAGAACCCCAGTGAAAT...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAAAAGTCAGCAAGGACTaGTTAATGCTCACACCTTCC | + |
Preference number: 5 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQKVSKD*LMLTPS Trigger: GGAAGGTGTGAGCATTAACAAGTCCTTGCTGACTTT...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAAAACCCTCTTTCCGTTaGCTTGCTCGGAGAGTGCAG | + |
Preference number: 5 (lower is better) Translates to: ISTIHRSTSFALSICLTQKPSFR*LARRVQ Trigger: CTGCACTCTCCGAGCAAGCAAACGGAAAGAGGGTTT...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | TACAGTTCAGAGACCTCTGCCCAGGCAATAGCACTTCGACAAATGCAGTCAAGCTGCGATCTGAATTCCTaGCATCATTTCTTCCTTCGC | + |
Preference number: 5 (lower is better) Translates to: YSSETSAQAIALRQMQSSCDLNS*HHFFLR Trigger: GCGAAGGAAGAAATGATGCAAGGAATTCAGATCGCA...GCTTGACTGCATTTGTCGAAGTGCTATTGCCTGGGCAGAGGTCTCTGAACTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATCTCCAATCTCTTCCTTaGAGACTCTTCCCTCAGCTC | + |
Preference number: 5 (lower is better) Translates to: TIHRSTSFALSICLTQWDLQSLP*RLFPQL Trigger: GAGCTGAGGGAAGAGTCTCAAAGGAAGAGATTGGAG...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ACTCACGGGAAGTCCCTTACAGAACCTGCTCAGGTCACCCAGGCTAAGATACTAAGGACTCTGATGAATTaGAGTAAATGGTGCTCGGTT | + |
Preference number: 5 (lower is better) Translates to: THGKSLTEPAQVTQAKILRTLMN*SKWCSV Trigger: AACCGAGCACCATTTACTCAAATTCATCAGAGTCCT...TAGTATCTTAGCCTGGGTGACCTGAGCAGGTTCTGTAAGGGACTTCCCGTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATTCCAGAACACAGAGCTaGCTCCCTTTCAGAACAGCT | + |
Preference number: 5 (lower is better) Translates to: TIHRSTSFALSICLTQWDSRTQS*LPFRTA Trigger: AGCTGTTCTGAAAGGGAGCAAGCTCTGTGTTCTGGA...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS CCA 90 bp | TGTCCAGGAGTGGTGCAGCTAGTGTCTCATATACAGTTGTCTGGCTaGCATAGCCAGGGTGACATTCATCAAAAGACCAAAAGGAAACAT | + |
Preference number: 5 (lower is better) Translates to: CPGVVQLVSHIQLSG*HSQGDIHQKTKRKH Trigger: ATGTTTCCTTTTGGTCTTTTGATGAATGTCACCCTGGCTATGCCAGCCAGACAACTGTATATGAGACACTAGCTGCACCACTCCTGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS-3UTR CAA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATGTTATCTCTTCCCCATaGGTGAAGACAACCTGGGAT | + |
Preference number: 5 (lower is better) Translates to: TIHRSTSFALSICLTQWDVISSP*VKTTWD Trigger: ATCCCAGGTTGTCTTCACCAATGGGGAAGAGATAAC...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAAACTCACAACATTCATaGACAGGCCTTCAACATACG | + |
Preference number: 5 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQNSQHS*TGLQHT Trigger: CGTATGTTGAAGGCCTGTCAATGAATGTTGTGAGTT...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAACAATCATGGCTGTTTTaGAATTTCCACCCAGGCTTT | + |
Preference number: 5 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQQSWLF*NFHPGF Trigger: AAAGCCTGGGTGGAAATTCAAAAACAGCCATGATTG...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAACTCATACACAGCTTTTaGGGAAGAAAGTTCTTGCTG | + |
Preference number: 5 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQLIHSF*GRKFLL Trigger: CAGCAAGAACTTTCTTCCCAAAAAGCTGTGTATGAG...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAAAGAACCTTCTTGTGCTaGAGTTCTGAAGCTTTTCGT | + |
Preference number: 5 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQRTFLC*SSEAFR Trigger: ACGAAAAGCTTCAGAACTCAAGCACAAGAAGGTTCT...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ACTTTTCCAGGCTCCAGAAAGTTGAGATCCCAAGCTGGAGGTTACGAACTCGAAATTTCACTGGGGTTCTaGTATCTGAGCTTCCAAATG | + |
Preference number: 5 (lower is better) Translates to: TFPGSRKLRSQAGGYELEISLGF*YLSFQM Trigger: CATTTGGAAGCTCAGATACAAGAACCCCAGTGAAAT...TTCGAGTTCGTAACCTCCAGCTTGGGATCTCAACTTTCTGGAGCCTGGAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR CAA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATGCAAAAAGAGAACTTTaGGGCCTCGGTTTAACTCGA | + |
Preference number: 5 (lower is better) Translates to: TIHRSTSFALSICLTQWDAKREL*GLGLTR Trigger: TCGAGTTAAACCGAGGCCCAAAAGTTCTCTTTTTGC...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAGTTATCTCTTCCCCATaGGTGAAGACAACCTGGGAT | + |
Preference number: 5 (lower is better) Translates to: ISTIHRSTSFALSICLTQVISSP*VKTTWD Trigger: ATCCCAGGTTGTCTTCACCAATGGGGAAGAGATAAC...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCACAATCATGGCTGTTTTaGAATTTCCACCCAGGCTTT | + |
Preference number: 5 (lower is better) Translates to: LSKFKEAQRSGRILPRTSQSWLF*NFHPGF Trigger: AAAGCCTGGGTGGAAATTCAAAAACAGCCATGATTG...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | GTTCTCCTATCACTTTCTCCATCCTCTACAGTTCAGAGACCTCTGCCCAGGCAACAAGTGGTTGTCCATTaGAAATGTAACTCCTGCTTT | + |
Preference number: 5 (lower is better) Translates to: VLLSLSPSSTVQRPLPRQQVVVH*KCNSCF Trigger: AAAGCAGGAGTTACATTTCAAATGGACAACCACTTG...TTGCCTGGGCAGAGGTCTCTGAACTGTAGAGGATGGAGAAAGTGATAGGAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAGGGTCTTCATTGAGATaGACAAGGTTTGGCAAGTGG | + |
Preference number: 5 (lower is better) Translates to: ISTIHRSTSFALSICLTQGSSLR*TRFGKW Trigger: CCACTTGCCAAACCTTGTCAATCTCAATGAAGACCC...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAAGCTGTGGGTCTTCATaGAGATTGACAAGGTTTGGC | + |
Preference number: 5 (lower is better) Translates to: ISTIHRSTSFALSICLTQSCGSS*RLTRFG Trigger: GCCAAACCTTGTCAATCTCAATGAAGACCCACAGCT...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATCGTTTACATATGTCTTaGCTTCTCCAGCTGGGACAA | + |
Preference number: 5 (lower is better) Translates to: TIHRSTSFALSICLTQWDRLHMS*LLQLGQ Trigger: TTGTCCCAGCTGGAGAAGCAAAGACATATGTAAACG...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATGAGCCAATCAATTCTTaGCAAATCCCGGGAAGAAAG | + |
Preference number: 5 (lower is better) Translates to: TIHRSTSFALSICLTQWDEPINS*QIPGRK Trigger: CTTTCTTCCCGGGATTTGCAAAGAATTGATTGGCTC...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCAAGAGAACAGGTTATCTaGACTTTCTTCATCCTGCTC | + |
Preference number: 5 (lower is better) Translates to: LSKFKEAQRSGRILPRTSREQVI*TFFILL Trigger: GAGCAGGATGAAGAAAGTCAAGATAACCTGTTCTCT...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAACATTATTTACACCCTTaGCTTCTGTCCTCGATGCCT | + |
Preference number: 5 (lower is better) Translates to: ISTIHRSTSFALSICLTQHYLHP*LLSSMP Trigger: AGGCATCGAGGACAGAAGCAAAGGGTGTAAATAATG...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | TTGAGTAAGTTCAAGGAAGCTCAGCGCTCAGGAAGAATCCTTCCGCGTACTTCACAAGTGGTTGTCCATTaGAAATGTAACTCCTGCTTT | + |
Preference number: 5 (lower is better) Translates to: LSKFKEAQRSGRILPRTSQVVVH*KCNSCF Trigger: AAAGCAGGAGTTACATTTCAAATGGACAACCACTTG...TGAAGTACGCGGAAGGATTCTTCCTGAGCGCTGAGCTTCCTTGAACTTACTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAACGTTTACATATGTCTTaGCTTCTCCAGCTGGGACAA | + |
Preference number: 5 (lower is better) Translates to: ISTIHRSTSFALSICLTQRLHMS*LLQLGQ Trigger: TTGTCCCAGCTGGAGAAGCAAAGACATATGTAAACG...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | AGGCTTTCTTTTAATAGCCATGTAAGAGTGGATTCCCGATATGGAATAAAAACCGAGGCAGGTCATGCCTaGGTGTCCATCTGTGTTCTG | + |
Preference number: 5 (lower is better) Translates to: RLSFNSHVRVDSRYGIKTEAGHA*VSICVL Trigger: CAGAACACAGATGGACACCAAGGCATGACCTGCCTC...GGTTTTTATTCCATATCGGGAATCCACTCTTACATGGCTATTAAAAGAAAGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR CAA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAATTTCACTGGGGTTCTaGTATCTGAGCTTCCAAATG | + |
Preference number: 5 (lower is better) Translates to: ISTIHRSTSFALSICLTQISLGF*YLSFQM Trigger: CATTTGGAAGCTCAGATACAAGAACCCCAGTGAAAT...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAACTCATACACAGCTTTTaGGGAAGAAAGTTCTTGCTG | + |
Preference number: 5 (lower is better) Translates to: ISTIHRSTSFALSICLTQLIHSF*GRKFLL Trigger: CAGCAAGAACTTTCTTCCCAAAAAGCTGTGTATGAG...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAAGAGAACAGGTTATCTaGACTTTCTTCATCCTGCTC | + |
Preference number: 5 (lower is better) Translates to: ISTIHRSTSFALSICLTQREQVI*TFFILL Trigger: GAGCAGGATGAAGAAAGTCAAGATAACCTGTTCTCT...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS-3UTR CAA 90 bp | ACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAATGGGATCTTCATGACTTTGTTTaGAGCCTCTTTAACCATCGA | + |
Preference number: 5 (lower is better) Translates to: TIHRSTSFALSICLTQWDLHDFV*SLFNHR Trigger: TCGATGGTTAAAGAGGCTCAAAACAAAGTCATGAAG...ATCCCATTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS TCA 90 bp | CTATTTATGTCGATGGTTTTACTTCCAGCATTCACGAATGGATCATaGTTCTCACACTCTGACATATCTGCCTTCAAGTGCAGTTCCAGC | + |
Preference number: 5 (lower is better) Translates to: LFMSMVLLPAFTNGS*FSHSDISAFKCSSS Trigger: GCTGGAACTGCACTTGAAGGCAGATATGTCAGAGTGTGAGAATCATGATCCATTCGTGAATGCTGGAAGTAAAACCATCGACATAAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS-3UTR CAA 90 bp | TTGATGAGCCAATCAATTCTTTGCAAATCCCGGGAAGAAAGGACTCTGATGAATCATTATTTACACCCTTaGCTTCTGTCCTCGATGCCT | + |
Preference number: 5 (lower is better) Translates to: LMSQSILCKSREERTLMNHYLHP*LLSSMP Trigger: AGGCATCGAGGACAGAAGCAAAGGGTGTAAATAATG...ATTCATCAGAGTCCTTTCTTCCCGGGATTTGCAAAGAATTGATTGGCTCATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201676.4 |
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CDS-3UTR CAA 90 bp | ATATCCACAATTCACAGATCGACCAGCTTTGCCCTATCAATATGCCTCACCCAAATTCTCCTGAAGCATTaGTACTTCTTCAGCGATCTT | + |
Preference number: 5 (lower is better) Translates to: ISTIHRSTSFALSICLTQILLKH*YFFSDL Trigger: AAGATCGCTGAAGAAGTACAAATGCTTCAGGAGAAT...TTGGGTGAGGCATATTGATAGGGCAAAGCTGGTCGATCTGTGAATTGTGGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |
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CDS CCA 72 bp | GACCTGGGTCTTTGCATCTCGTCAACCCGGTGTCGTTaGAGTCTTTCACGGAGACGACAGACGACAGGACAC | + |
Preference number: 6 (lower is better) Translates to: DLGLCISSTRCR*SLSRRRQTTGH Trigger: GTGTCCTGTCGTCTGTCGTCTCCGTGAAAGACTCCAACGACACCGGGTTGACGAGATGCAAAGACCCAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS CCA 72 bp | ACCGGGAGCTTTTATCGTTCATGCCGGTGGCCGCCGTaGCTCTCTGTTTATTTCCCAGTTCCAGCCAGCTTG | + |
Preference number: 6 (lower is better) Translates to: TGSFYRSCRWPP*LSVYFPVPASL Trigger: CAAGCTGGCTGGAACTGGGAAATAAACAGAGAGCCACGGCGGCCACCGGCATGAACGATAAAAGCTCCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195274.3 |
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CDS CAA 72 bp | GGACCTGGGTCTTTGCATCTCGTCAACCCGGTGTCGTaGGAGTCTTTCACGGAGACGACAGACGACAGGACA | + |
Preference number: 6 (lower is better) Translates to: GPGSLHLVNPVS*ESFTETTDDRT Trigger: TGTCCTGTCGTCTGTCGTCTCCGTGAAAGACTCCAACGACACCGGGTTGACGAGATGCAAAGACCCAGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS TCA 72 bp | TTGCTGAAAGGCCTCACGCGCACCGCCACGGTCACCTaGCTGTTCTCTACTTTTAAGGAGTCTGGCTCTGTA | + |
Preference number: 6 (lower is better) Translates to: LLKGLTRTATVT*LFSTFKESGSV Trigger: TACAGAGCCAGACTCCTTAAAAGTAGAGAACAGTCAGGTGACCGTGGCGGTGCGCGTGAGGCCTTTCAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS CCA 72 bp | AGTGCAGTTCCAGCCGGCTGCTGTGGACGAGGCCACTaGATGCTGAAATCTTCTGTGAAGAAGAAACCTCCA | + |
Preference number: 6 (lower is better) Translates to: SAVPAGCCGRGH*MLKSSVKKKPP Trigger: TGGAGGTTTCTTCTTCACAGAAGATTTCAGCATCCAGTGGCCTCGTCCACAGCAGCCGGCTGGAACTGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS CCA 72 bp | TTCTGTCCTCGATGCCTGGGAGGCAGAGTCACTTCCTaGGTTACCTCCCACAGGATTCAATGTCTCCCACTT | + |
Preference number: 6 (lower is better) Translates to: FCPRCLGGRVTS*VTSHRIQCLPL Trigger: AAGTGGGAGACATTGAATCCTGTGGGAGGTAACCCAGGAAGTGACTCTGCCTCCCAGGCATCGAGGACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS CCA 72 bp | TGTCACCTTTTCATTAGAGGCACCAACGGGAGGACCTaGGTCTTTGCATCTCGTCAACCCGGTGTCGTTGGA | + |
Preference number: 6 (lower is better) Translates to: CHLFIRGTNGRT*VFASRQPGVVG Trigger: TCCAACGACACCGGGTTGACGAGATGCAAAGACCCAGGTCCTCCCGTTGGTGCCTCTAATGAAAAGGTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS CAA 90 bp | CTCGCGCTTCTGAATGTACTGCCATGTTTCGGGATGTCCTTCCCATaGTTTTTCGGTGTGGATAAAGCTGGGCTTTTCGGTGGAGGCGGG | + |
Preference number: 6 (lower is better) Translates to: LALLNVLPCFGMSFP*FFGVDKAGLFGGGG Trigger: CCCGCCTCCACCGAAAAGCCCAGCTTTATCCACACCGAAAAACAATGGGAAGGACATCCCGAAACATGGCAGTACATTCAGAAGCGCGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS TCA 72 bp | TGCACCACTAAGTGTCCTGATCTCATAGCTTCAGTCTaGCGCTGGGAACCCACAGGCGCTCTACTGTTTGTG | + |
Preference number: 6 (lower is better) Translates to: CTTKCPDLIASV*RWEPTGALLFV Trigger: CACAAACAGTAGAGCGCCTGTGGGTTCCCAGCGTCAGACTGAAGCTATGAGATCAGGACACTTAGTGGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS CAA 72 bp | CAGACGACAGGACACGGGTATCATTATTTACACCCTTaGCTTCTGTCCTCGATGCCTGGGAGGCAGAGTCAC | + |
Preference number: 6 (lower is better) Translates to: QTTGHGYHYLHP*LLSSMPGRQSH Trigger: GTGACTCTGCCTCCCAGGCATCGAGGACAGAAGCAAAGGGTGTAAATAATGATACCCGTGTCCTGTCGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS TCA 72 bp | ATTTTACCGGGGTCCTCGATTCTGAGCTCGCGCTTCTaGATGTACTGCCATGTTTCGGGATGTCCTTCCCAT | + |
Preference number: 6 (lower is better) Translates to: ILPGSSILSSRF*MYCHVSGCPSH Trigger: ATGGGAAGGACATCCCGAAACATGGCAGTACATTCAGAAGCGCGAGCTCAGAATCGAGGACCCCGGTAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS GCA 72 bp | AGACGACAGGACACGGGTATCATTATTTACACCCTTTaGTTCTGTCCTCGATGCCTGGGAGGCAGAGTCACT | + |
Preference number: 6 (lower is better) Translates to: RRQDTGIIIYTL*FCPRCLGGRVT Trigger: AGTGACTCTGCCTCCCAGGCATCGAGGACAGAAGCAAAGGGTGTAAATAATGATACCCGTGTCCTGTCGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS GCA 72 bp | GTGGATAAAGCTGGGCTTTTCGGTGGAGGCAGGTCATaGCTTGGTGTCCATCTGTGTTCTGGGACACATTTT | + |
Preference number: 6 (lower is better) Translates to: VDKAGLFGGGRS*LGVHLCSGTHF Trigger: AAAATGTGTCCCAGAACACAGATGGACACCAAGGCATGACCTGCCTCCACCGAAAAGCCCAGCTTTATCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS CAA 72 bp | ATAAAGCTGGGCTTTTCGGTGGAGGCAGGTCATGCCTaGGTGTCCATCTGTGTTCTGGGACACATTTTACCG | + |
Preference number: 6 (lower is better) Translates to: IKLGFSVEAGHA*VSICVLGHILP Trigger: CGGTAAAATGTGTCCCAGAACACAGATGGACACCAAGGCATGACCTGCCTCCACCGAAAAGCCCAGCTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS CAA 72 bp | TGTGAGTTTCTTCCTCCTGACACTGGGGTATCAGACTaGCTCTCGGTCAGTTGCACCACTAAGTGTCCTGAT | + |
Preference number: 6 (lower is better) Translates to: CEFLPPDTGVSD*LSVSCTTKCPD Trigger: ATCAGGACACTTAGTGGTGCAACTGACCGAGAGCAAGTCTGATACCCCAGTGTCAGGAGGAAGAAACTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS TCA 72 bp | TATCGGGATGCTCCACAGTTATCTCTTCCCCATTGGTaGAGACAACCTGGGATGCTTTCTCAGTCTTCTCTC | + |
Preference number: 6 (lower is better) Translates to: YRDAPQLSLPHW*RQPGMLSQSSL Trigger: GAGAGAAGACTGAGAAAGCATCCCAGGTTGTCTTCACCAATGGGGAAGAGATAACTGTGGAGCATCCCGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS CAA 90 bp | CAAAAGCTCTGTCCAGGAGTGGTGCAGCTAGTGTCTCATATACAGTaGTCTGGCTGGCATAGCCAGGGTGACATTCATCAAAAGACCAAA | + |
Preference number: 6 (lower is better) Translates to: QKLCPGVVQLVSHIQ*SGWHSQGDIHQKTK Trigger: TTTGGTCTTTTGATGAATGTCACCCTGGCTATGCCAGCCAGACAACTGTATATGAGACACTAGCTGCACCACTCCTGGACAGAGCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS CCA 72 bp | GTGGTGCAGCTAGTGTCTCATATACAGTTGTCTGGCTaGCATAGCCAGGGTGACATTCATCAAAAGACCAAA | + |
Preference number: 6 (lower is better) Translates to: VVQLVSHIQLSG*HSQGDIHQKTK Trigger: TTTGGTCTTTTGATGAATGTCACCCTGGCTATGCCAGCCAGACAACTGTATATGAGACACTAGCTGCACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS CAA 72 bp | CTGAATGTACTGCCATGTTTCGGGATGTCCTTCCCATaGTTTTTCGGTGTGGATAAAGCTGGGCTTTTCGGT | + |
Preference number: 6 (lower is better) Translates to: LNVLPCFGMSFP*FFGVDKAGLFG Trigger: ACCGAAAAGCCCAGCTTTATCCACACCGAAAAACAATGGGAAGGACATCCCGAAACATGGCAGTACATTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS TCA 72 bp | TCGATGGTTTTACTTCCAGCATTCACGAATGGATCATaGTTCTCACACTCTGACATATCTGCCTTCAAGTGC | + |
Preference number: 6 (lower is better) Translates to: SMVLLPAFTNGS*FSHSDISAFKC Trigger: GCACTTGAAGGCAGATATGTCAGAGTGTGAGAATCATGATCCATTCGTGAATGCTGGAAGTAAAACCATCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 ENSMUST00000201676.4 |
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CDS CCA 72 bp | AGCAAAGAGATCTTCACAGAATCTAGGAATTATTCCTaGTTCTTCATTAAGCCCCATCATCGTATAGGACTT | + |
Preference number: 6 (lower is better) Translates to: SKEIFTESRNYS*FFIKPHHRIGL Trigger: AAGTCCTATACGATGATGGGGCTTAATGAAGAACCAGGAATAATTCCTAGATTCTGTGAAGATCTCTTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047817.12 ENSMUST00000189413.7 |