RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF13B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000060012

Ensembl transcript IDs: ENSMUST00000100473.5, ENSMUST00000224126.2, ENSMUST00000224503.2

Found 405 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGAACCCCCTCCCCCATCCTCAAGCAGGCAGGGAGGAGCTGGGCTaGCTCCATCCCACGAGTCTCTGGGCTCCTGGAACCTTCCACCCC +
Preference number: 1 (lower is better)
Translates to: GNPLPHPQAGREELG*LHPTSLWAPGTFHP
Trigger: GGGGTGGAAGGTTCCAGGAGCCCAGAGACTCGTGGGATGGAGCCAGCCCAGCTCCTCCCTGCCTGCTTGAGGATGGGGGAGGGGGTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CCA 90 bp TGGCTGGGAACCCCCTCCCCCATCCTCAAGCAGGCAGGGAGGAGCTaGGCTGGCTCCATCCCACGAGTCTCTGGGCTCCTGGAACCTTCC +
Preference number: 1 (lower is better)
Translates to: WLGTPSPILKQAGRS*AGSIPRVSGLLEPS
Trigger: GGAAGGTTCCAGGAGCCCAGAGACTCGTGGGATGGAGCCAGCCCAGCTCCTCCCTGCCTGCTTGAGGATGGGGGAGGGGGTTCCCAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 90 bp TGCAGCAGGATGAGGTGTGGCCCAGGGGAGGCTGATAATCTCCGGTaGACGGAGAGGGTAGTGTGCGTGCTGGGCCCAGGCAGGGGAAGT +
Preference number: 1 (lower is better)
Translates to: CSRMRCGPGEADNLR*TERVVCVLGPGRGS
Trigger: ACTTCCCCTGCCTGGGCCCAGCACGCACACTACCCTCTCCGTGCACCGGAGATTATCAGCCTCCCCTGGGCCACACCTCATCCTGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR TCA 90 bp GGCAGGTCTCTCCTGGCAGATTGTGGTGACAAGTGGAGTGACACTTaGCTCCCAGGCTGGGGTGCAGGCAGAGTCTGCACCTGTGCCAGG +
Preference number: 1 (lower is better)
Translates to: GRSLLADCGDKWSDT*LPGWGAGRVCTCAR
Trigger: CCTGGCACAGGTGCAGACTCTGCCTGCACCCCAGCCTGGGAGTCAAGTGTCACTCCACTTGTCACCACAATCTGCCAGGAGAGACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 90 bp ACCATGACTCCAGCCCAGATCCACAGAAGGAAATGGAGATGGTTCTaGCCTCACTACCTGCCTGGCCAGCTGCTGGCCCCAGGCACAGGC +
Preference number: 1 (lower is better)
Translates to: TMTPAQIHRRKWRWF*PHYLPGQLLAPGTG
Trigger: GCCTGTGCCTGGGGCCAGCAGCTGGCCAGGCAGGTAGTGAGGGCAGAACCATCTCCATTTCCTTCTGTGGATCTGGGCTGGAGTCATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 90 bp GACCAGCAAGCACCTGAGCCCCATCTCTTCGGACCCACCCGAAAGTaGCAGCTTTCCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGG +
Preference number: 1 (lower is better)
Translates to: DQQAPEPHLFGPTRK*QLSQGHLPALKADR
Trigger: CCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGGAAAGCTGGCACTTTCGGGTGGGTCCGAAGAGATGGGGCTCAGGTGCTTGCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 90 bp GGGACACCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTaGAGCAGGATGAGGTGTGGCCCAGGGGAGGCTGATAATCTCCGG +
Preference number: 1 (lower is better)
Translates to: GTPTKMPLRNPVSQP*SRMRCGPGEADNLR
Trigger: CCGGAGATTATCAGCCTCCCCTGGGCCACACCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGGTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CCA 90 bp CAGCATCCCTGCGTCGTGCAAAAAGCATTCATGGCCCTGCTCCCATaGAGGAGCCAGGTCTCCCCCTTCCTGTTCGAGTCCACAAGGGAG +
Preference number: 1 (lower is better)
Translates to: QHPCVVQKAFMALLP*RSQVSPFLFESTRE
Trigger: CTCCCTTGTGGACTCGAACAGGAAGGGGGAGACCTGGCTCCTCCATGGGAGCAGGGCCATGAATGCTTTTTGCACGACGCAGGGATGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CCA 90 bp GGAACCAGATTGTCCAGCATCCCTGCGTCGTGCAAAAAGCATTCATaGCCCTGCTCCCATGGAGGAGCCAGGTCTCCCCCTTCCTGTTCG +
Preference number: 1 (lower is better)
Translates to: GTRLSSIPASCKKHS*PCSHGGARSPPSCS
Trigger: CGAACAGGAAGGGGGAGACCTGGCTCCTCCATGGGAGCAGGGCCATGAATGCTTTTTGCACGACGCAGGGATGCTGGACAATCTGGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 90 bp TCCCAGAGGGAACAGGGAACCAGATTGTCCAGCATCCCTGCGTCGTaGAAAAAGCATTCATGGCCCTGCTCCCATGGAGGAGCCAGGTCT +
Preference number: 1 (lower is better)
Translates to: SQREQGTRLSSIPAS*KKHSWPCSHGGARS
Trigger: AGACCTGGCTCCTCCATGGGAGCAGGGCCATGAATGCTTTTTGCACGACGCAGGGATGCTGGACAATCTGGTTCCCTGTTCCCTCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 90 bp TCCAGCTTCCCAGAGGGAACAGGGAACCAGATTGTCCAGCATCCCTaGGTCGTGCAAAAAGCATTCATGGCCCTGCTCCCATGGAGGAGC +
Preference number: 1 (lower is better)
Translates to: SSFPEGTGNQIVQHP*VVQKAFMALLPWRS
Trigger: GCTCCTCCATGGGAGCAGGGCCATGAATGCTTTTTGCACGACGCAGGGATGCTGGACAATCTGGTTCCCTGTTCCCTCTGGGAAGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 90 bp AGCAGCCATTGCATGGCCATCCTAGAGGATGGGACTCCGGGACACTaGTCTCTAGGGGACACTGTGGATGCTGACAGGAGAAAAGCTCTC +
Preference number: 1 (lower is better)
Translates to: SSHCMAILEDGTPGH*SLGDTVDADRRKAL
Trigger: GAGAGCTTTTCTCCTGTCAGCATCCACAGTGTCCCCTAGAGAGCAGTGTCCCGGAGTCCCATCCTCTAGGATGGCCATGCAATGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CCA 90 bp GCTCTCACTAGAACACAGTCAGAAGCACTGTGGGCTTCCATAGAGTaGCCAGGCAGGACTGGCACTGCTAACTCACCTGGTGCGTATCCC +
Preference number: 1 (lower is better)
Translates to: ALTRTQSEALWASIE*PGRTGTANSPGAYP
Trigger: GGGATACGCACCAGGTGAGTTAGCAGTGCCAGTCCTGCCTGGCCACTCTATGGAAGCCCACAGTGCTTCTGACTGTGTTCTAGTGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CCA 90 bp GGTGGCCTGGGCCTTGAGGCACTAGAAGCTTCAAGTCACCATCCATaGGCAACACGTAGCAAAGGCAGCTTGGACAGACAGGTAAATGCT +
Preference number: 1 (lower is better)
Translates to: GGLGLEALEASSHHP*ATRSKGSLDRQVNA
Trigger: AGCATTTACCTGTCTGTCCAAGCTGCCTTTGCTACGTGTTGCCCATGGATGGTGACTTGAAGCTTCTAGTGCCTCAAGGCCCAGGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR TCA 90 bp CACGTCTCAGCAAACAGGTGGTTGGTAATGCCCTGGGATATACCATaGCTCCAGCCCAGATCCACAGAAGGAAATGGAGATGGTTCTGCC +
Preference number: 1 (lower is better)
Translates to: HVSANRWLVMPWDIP*LQPRSTEGNGDGSA
Trigger: GGCAGAACCATCTCCATTTCCTTCTGTGGATCTGGGCTGGAGTCATGGTATATCCCAGGGCATTACCAACCACCTGTTTGCTGAGACGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 90 bp GCGTATCCCAAGATGCCAGCTGAGGGAGAGGAGTTACTGAATTGGTaGCTGCCTCTAGCTGGCAGCTCCAGAAATCTGTGCTATTCAAGA +
Preference number: 1 (lower is better)
Translates to: AYPKMPAEGEELLNW*LPLAGSSRNLCYSR
Trigger: TCTTGAATAGCACAGATTTCTGGAGCTGCCAGCTAGAGGCAGGCACCAATTCAGTAACTCCTCTCCCTCAGCTGGCATCTTGGGATACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR TCA 90 bp CCATGGTGTCTCCAATCAAGTAACACAAGGGCAGCTGGTTTCATTTaGTGGCTGCCACTTCCAGCAACCACCATCCAAGATAGAGGCTGC +
Preference number: 1 (lower is better)
Translates to: PWCLQSSNTRAAGFI*WLPLPATTIQDRGC
Trigger: GCAGCCTCTATCTTGGATGGTGGTTGCTGGAAGTGGCAGCCATCAAATGAAACCAGCTGCCCTTGTGTTACTTGATTGGAGACACCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 90 bp GTCTCCAATCAAGTAACACAAGGGCAGCTGGTTTCATTTGATGGCTaGCACTTCCAGCAACCACCATCCAAGATAGAGGCTGCAGCTCTG +
Preference number: 1 (lower is better)
Translates to: VSNQVTQGQLVSFDG*HFQQPPSKIEAAAL
Trigger: CAGAGCTGCAGCCTCTATCTTGGATGGTGGTTGCTGGAAGTGGCAGCCATCAAATGAAACCAGCTGCCCTTGTGTTACTTGATTGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CCA 90 bp CAGAAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCTCCTaGCAGATTGTGGTGACAAGTGGAGTGACACTTGACTCCCAGGCT +
Preference number: 1 (lower is better)
Translates to: QKSVLFKNGTEAGLS*QIVVTSGVTLDSQA
Trigger: AGCCTGGGAGTCAAGTGTCACTCCACTTGTCACCACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR TCA 90 bp AACATGTACCAAATCACTGGATTCCTGGAATCAACATCACAGATATaGGCTCATATTTACACAATCCACACAGCCGTGCTTTTCCCAATT +
Preference number: 1 (lower is better)
Translates to: NMYQITGFLESTSQI*AHIYTIHTAVLFPI
Trigger: AATTGGGAAAAGCACGGCTGTGTGGATTGTGTAAATATGAGCTCATATCTGTGATGTTGATTCCAGGAATCCAGTGATTTGGTACATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCCCCTCACTACCTGCCTaGCCAGCTGCTGGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGPSLPA*PAAGPR
Trigger: CCTGGGGCCAGCAGCTGGCCAGGCAGGTAGTGAGGG...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR GCA 90 bp AGGGAGGAGCTGGGCTGGCTCCATCCCACGAGTCTCTGGGCTCCTGGAACCTTCAGGGGCCTCTGCCACTaGCAAGCAGAGGAAGGAAAT +
Preference number: 2 (lower is better)
Translates to: REELGWLHPTSLWAPGTFRGLCH*QAEEGN
Trigger: ATTTCCTTCCTCTGCTTGGCAGTGGCAGAGGCCCCT...GAAGGTTCCAGGAGCCCAGAGACTCGTGGGATGGAGCCAGCCCAGCTCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCTGGGCTTCCATAGAGTaGCCAGGCAGGACTGGCACT +
Preference number: 2 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGWASIE*PGRTGT
Trigger: AGTGCCAGTCCTGCCTGGCCACTCTATGGAAGCCCA...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGGATCCGTGCCAACCCTaGGTCAGCCTTCCCACCAGG +
Preference number: 2 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKDPCQP*VSLPTR
Trigger: CCTGGTGGGAAGGCTGACCCAGGGTTGGCACGGATC...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCGCTCTAAGCAGCCTCTaGTCAGGGTTTGGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGALSSL*SGFGQA
Trigger: TGCTTGCCCAAACCCTGACCAGAGGCTGCTTAGAGC...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR TCA 90 bp ACAGTCAGAAGCACTGTGGGCTTCCATAGAGTGGCCAGGCAGGACTGGCACTGCTGTACTGATACAGCCTaGGGTGGAAGGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: TVRSTVGFHRVARQDWHCCTDTA*GGRQGR
Trigger: CCTGCCCTGCCTTCCACCTCAGGCTGTATCAGTACA...GCAGTGCCAGTCCTGCCTGGCCACTCTATGGAAGCCCACAGTGCTTCTGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR GCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCAGCATCCCTGCGTCGTaGAAAAAGCATTCATGGCCC +
Preference number: 2 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGSIPAS*KKHSWP
Trigger: GGGCCATGAATGCTTTTTGCACGACGCAGGGATGCT...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp AGGGAGGAGCTGGGCTGGCTCCATCCCACGAGTCTCTGGGCTCCTGGAACCTTCTGCAAAAAGCATTCATaGCCCTGCTCCCATGGAGGA +
Preference number: 2 (lower is better)
Translates to: REELGWLHPTSLWAPGTFCKKHS*PCSHGG
Trigger: TCCTCCATGGGAGCAGGGCCATGAATGCTTTTTGCA...GAAGGTTCCAGGAGCCCAGAGACTCGTGGGATGGAGCCAGCCCAGCTCCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR GCA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCCCTGTGAGCCAGCCGTaGAGCAGGATGAGGTGTGGC +
Preference number: 2 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSPVSQP*SRMRCG
Trigger: GCCACACCTCATCCTGCTGCACGGCTGGCTCACAGG...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR GCA 90 bp AGCTGGCAGCTCCAGAAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCACGGAGAGGGTAGTGTaGGTGCTGGGCCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: SWQLQKSVLFKNGTEAGLTERVV*VLGPGR
Trigger: CCTGCCTGGGCCCAGCACGCACACTACCCTCTCCGT...GAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCTGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR GCA 90 bp ACAGTCAGAAGCACTGTGGGCTTCCATAGAGTGGCCAGGCAGGACTGGCACTGCGGGACTCAAAGGCCATaGACGTCTCAGCAAACAGGT +
Preference number: 2 (lower is better)
Translates to: TVRSTVGFHRVARQDWHCGTQRP*TSQQTG
Trigger: ACCTGTTTGCTGAGACGTGCATGGCCTTTGAGTCCC...GCAGTGCCAGTCCTGCCTGGCCACTCTATGGAAGCCCACAGTGCTTCTGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR GCA 90 bp AATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGTGACAAGTGGAGTGACAGGTGCAGGCAGAGTCTaGACCTGTGCCAGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: NGTEAGLSWQIVVTSGVTGAGRV*TCARKA
Trigger: GGCCTTCCTGGCACAGGTGCAGACTCTGCCTGCACC...TGTCACTCCACTTGTCACCACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCGGCCATCCTAGAGGATaGGACTCCGGGACACTGCTC +
Preference number: 2 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSGHPRG*DSGTLL
Trigger: GAGCAGTGTCCCGGAGTCCCATCCTCTAGGATGGCC...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR GCA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGGAGTTACTGAATTGGTaGCTGCCTCTAGCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKELLNW*LPLAGS
Trigger: GCTGCCAGCTAGAGGCAGGCACCAATTCAGTAACTC...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR GCA 90 bp AAGCACCTGAGCCCCATCTCTTCGGACCCACCCGAAAGTGCCAGCTTTCCCAAGATTGTCCAGCATCCCTaGGTCGTGCAAAAAGCATTC +
Preference number: 2 (lower is better)
Translates to: KHLSPISSDPPESASFPKIVQHP*VVQKAF
Trigger: GAATGCTTTTTGCACGACGCAGGGATGCTGGACAAT...CTTGGGAAAGCTGGCACTTTCGGGTGGGTCCGAAGAGATGGGGCTCAGGTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR GCA 90 bp AAGAGTATCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGAACTCCCAGGCTGGGGTaGAGGCAGAGTCTGCACCTG +
Preference number: 2 (lower is better)
Translates to: KSILQGSVEMVLLSEAGGTPRLG*RQSLHL
Trigger: CAGGTGCAGACTCTGCCTGCACCCCAGCCTGGGAGT...TCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGATACTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp AATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGTGACAAGTGGAGTGACAGAGTCTCTGGGCTCCTaGAACCTTCCACCCCTAACC +
Preference number: 2 (lower is better)
Translates to: NGTEAGLSWQIVVTSGVTESLGS*NLPPLT
Trigger: GGTTAGGGGTGGAAGGTTCCAGGAGCCCAGAGACTC...TGTCACTCCACTTGTCACCACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR TCA 90 bp AAGCACCTGAGCCCCATCTCTTCGGACCCACCCGAAAGTGCCAGCTTTCCCAAGTTGCTATGTGTGCCATaGGATCCCAAAAGATCCCAT +
Preference number: 2 (lower is better)
Translates to: KHLSPISSDPPESASFPKLLCVP*DPKRSH
Trigger: ATGGGATCTTTTGGGATCTCATGGCACACATAGCAA...CTTGGGAAAGCTGGCACTTTCGGGTGGGTCCGAAGAGATGGGGCTCAGGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR GCA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCAAAGCATTCATGGCCCTaGTCCCATGGAGGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: KDPIHIEHQVHESRAFCAKHSWP*SHGGAR
Trigger: CCTGGCTCCTCCATGGGAGCAGGGCCATGAATGCTT...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR GCA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGGGGCTAATCAGACAATaGAGACAGTCCAGACTGAGT +
Preference number: 2 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKGLIRQ*RQSRLS
Trigger: ACTCAGTCTGGACTGTCTGCATTGTCTGATTAGCCC...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCACATCCCACGAGTCTCTaGGCTCCTGGAACCTTCCAC +
Preference number: 2 (lower is better)
Translates to: KDPIHIEHQVHESRAFCAHPTSL*APGTFH
Trigger: GTGGAAGGTTCCAGGAGCCCAGAGACTCGTGGGATG...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp TCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATTTCTTACCCAACACATCTGGCTaGGAACCCCCTCCCCCATCC +
Preference number: 2 (lower is better)
Translates to: SCKALWKWYYFQRQGDFLPNTSG*EPPPPS
Trigger: GGATGGGGGAGGGGGTTCCCAGCCAGATGTGTTGGG...TAAGAAATCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp CCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCCACAGGAACAACTCATAAGCACAGGCAGGCATGTTaGGATAGACAGCGATTGTGG +
Preference number: 2 (lower is better)
Translates to: PQSRQEHRVLSATGTTHKHRQAC*DRQRLW
Trigger: CCACAATCGCTGTCTATCCCAACATGCCTGCCTGTG...CTTATGAGTTGTTCCTGTGGCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCAGGACCCATGTGCTTTaGCCAGTTGCCTGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSRTHVL*PVACEA
Trigger: AGCTTCACAGGCAACTGGCCAAAGCACATGGGTCCT...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CAA 90 bp GAAGCTTCAAGTCACCATCCATGGGCAACACGTAGCAAAGGCAGCTaGGACAGACAGGTAAATGCTACATGGGTCACTCACCTGCTTCCC +
Preference number: 2 (lower is better)
Translates to: EASSHHPWATRSKGS*DRQVNATWVTHLLP
Trigger: GGGAAGCAGGTGAGTGACCCATGTAGCATTTACCTGTCTGTCCAAGCTGCCTTTGCTACGTGTTGCCCATGGATGGTGACTTGAAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR TCA 90 bp AATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGTGACAAGTGGAGTGACAGCAGCTGGTTTCATTTaGTGGCTGCCACTTCCAGCA +
Preference number: 2 (lower is better)
Translates to: NGTEAGLSWQIVVTSGVTAAGFI*WLPLPA
Trigger: TGCTGGAAGTGGCAGCCATCAAATGAAACCAGCTGC...TGTCACTCCACTTGTCACCACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCCTGTTAGGAAATGAATaGCCAGCAGAAAAGATTTTG +
Preference number: 2 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGLLGNE*PAEKIL
Trigger: CAAAATCTTTTCTGCTGGCCATTCATTTCCTAACAG...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp AAGCACCTGAGCCCCATCTCTTCGGACCCACCCGAAAGTGCCAGCTTTCCCAAGTCCTGCAAGGCTCTGTaGAAATGGTATTACTTTCAG +
Preference number: 2 (lower is better)
Translates to: KHLSPISSDPPESASFPKSCKAL*KWYYFQ
Trigger: CTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA...CTTGGGAAAGCTGGCACTTTCGGGTGGGTCCGAAGAGATGGGGCTCAGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR GCA 90 bp ACAGTCAGAAGCACTGTGGGCTTCCATAGAGTGGCCAGGCAGGACTGGCACTGCAGCTCCAGAAATCTGTaGTATTCAAGAATGGAACAG +
Preference number: 2 (lower is better)
Translates to: TVRSTVGFHRVARQDWHCSSRNL*YSRMEQ
Trigger: CTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCT...GCAGTGCCAGTCCTGCCTGGCCACTCTATGGAAGCCCACAGTGCTTCTGACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR GCA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCACATTGAGCACCAAGTaGATGAGAGCAGAGCCTTCT +
Preference number: 2 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSTLSTK*MRAEPS
Trigger: AGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGT...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGAAGGCTCTGTGGAAATaGTATTACTTTCAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKKALWK*YYFQRQ
Trigger: CTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTT...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CAA 90 bp ACACTTGCTATGTGTGCCATGAGATCCCAAAAGATCCCATCCACATaGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCAGACAGAC +
Preference number: 2 (lower is better)
Translates to: TLAMCAMRSQKIPST*STKCMRAEPSVQTD
Trigger: GTCTGTCTGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTTTGGGATCTCATGGCACACATAGCAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR TCA 90 bp TCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATTTCTTAGAACCTCAGATCCAATaGGCAGGGAGGGAAGGGAAG +
Preference number: 2 (lower is better)
Translates to: SCKALWKWYYFQRQGDFLEPQIQ*AGREGK
Trigger: CTTCCCTTCCCTCCCTGCTCATTGGATCTGAGGTTC...TAAGAAATCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR TCA 90 bp CCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCCACAGGAACAACTCATAAGCATCCTGTTAGGAAATaGATGGCCAGCAGAAAAGAT +
Preference number: 2 (lower is better)
Translates to: PQSRQEHRVLSATGTTHKHPVRK*MASRKD
Trigger: ATCTTTTCTGCTGGCCATTCATTTCCTAACAGGATG...CTTATGAGTTGTTCCTGTGGCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR GCA 90 bp TCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATTTCTTACTCCCTAGCAGCCATTaGATGGCCATCCTAGAGGAT +
Preference number: 2 (lower is better)
Translates to: SCKALWKWYYFQRQGDFLLPSSH*MAILED
Trigger: ATCCTCTAGGATGGCCATGCAATGGCTGCTAGGGAG...TAAGAAATCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp AAGAGTATCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGAGTCTCAGCAAACAGGTaGTTGGTAATGCCCTGGGAT +
Preference number: 2 (lower is better)
Translates to: KSILQGSVEMVLLSEAGGVSANR*LVMPWD
Trigger: ATCCCAGGGCATTACCAACCACCTGTTTGCTGAGAC...TCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGATACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CCA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGGATAGACAGCGATTGTaGATTGTGAAGTATTTTAAC +
Preference number: 2 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKDRQRL*IVKYFN
Trigger: GTTAAAATACTTCACAATCCACAATCGCTGTCTATC...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CAA 90 bp AGTTCAAGCATCCTGTTAGGAAATGAATGGCCAGCAGAAAAGATTTaGAATGTAAAGACACCGGGACACCCACAAAGATGCCTCTTAGAA +
Preference number: 2 (lower is better)
Translates to: SSSILLGNEWPAEKI*NVKTPGHPQRCLLE
Trigger: TTCTAAGAGGCATCTTTGTGGGTGTCCCGGTGTCTTTACATTCAAAATCTTTTCTGCTGGCCATTCATTTCCTAACAGGATGCTTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 72 bp ATGAGGTGTGGCCCAGGGGAGGCTGATAATCTCCGGTaGACGGAGAGGGTAGTGTGCGTGCTGGGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: MRCGPGEADNLR*TERVVCVLGPG
Trigger: GCCTGGGCCCAGCACGCACACTACCCTCTCCGTGCACCGGAGATTATCAGCCTCCCCTGGGCCACACCTCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 72 bp GAGGCTGATAATCTCCGGTGCACGGAGAGGGTAGTGTaGGTGCTGGGCCCAGGCAGGGGAAGTCCAGTCTGT +
Preference number: 3 (lower is better)
Translates to: EADNLRCTERVV*VLGPGRGSPVC
Trigger: ACAGACTGGACTTCCCCTGCCTGGGCCCAGCACGCACACTACCCTCTCCGTGCACCGGAGATTATCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR TCA 72 bp GGCCCTATGGTCTCTGACCTGAGGTGGCCTGGGCCTTaGGGCACTAGAAGCTTCAAGTCACCATCCATGGGC +
Preference number: 3 (lower is better)
Translates to: GPMVSDLRWPGP*GTRSFKSPSMG
Trigger: GCCCATGGATGGTGACTTGAAGCTTCTAGTGCCTCAAGGCCCAGGCCACCTCAGGTCAGAGACCATAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 72 bp CTGCCACTTCCAGCAACCACCATCCAAGATAGAGGCTaGAGCTCTGGCCAGCCAGAGGCCAGAAAGCACAGG +
Preference number: 3 (lower is better)
Translates to: LPLPATTIQDRG*SSGQPEARKHR
Trigger: CCTGTGCTTTCTGGCCTCTGGCTGGCCAGAGCTGCAGCCTCTATCTTGGATGGTGGTTGCTGGAAGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 72 bp CACCCGAAAGTGCCAGCTTTCCCAAGGTCACCTCCCTaGCCTCAAAGCAGACAGGAACACAGGGTCCTCTCG +
Preference number: 3 (lower is better)
Translates to: HPKVPAFPRSPP*PQSRQEHRVLS
Trigger: CGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGGAAAGCTGGCACTTTCGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CCA 72 bp TGCGTCGTGCAAAAAGCATTCATGGCCCTGCTCCCATaGAGGAGCCAGGTCTCCCCCTTCCTGTTCGAGTCC +
Preference number: 3 (lower is better)
Translates to: CVVQKAFMALLP*RSQVSPFLFES
Trigger: GGACTCGAACAGGAAGGGGGAGACCTGGCTCCTCCATGGGAGCAGGGCCATGAATGCTTTTTGCACGACGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CCA 72 bp TTGTCCAGCATCCCTGCGTCGTGCAAAAAGCATTCATaGCCCTGCTCCCATGGAGGAGCCAGGTCTCCCCCT +
Preference number: 3 (lower is better)
Translates to: LSSIPASCKKHS*PCSHGGARSPP
Trigger: AGGGGGAGACCTGGCTCCTCCATGGGAGCAGGGCCATGAATGCTTTTTGCACGACGCAGGGATGCTGGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 72 bp TGCATGGCCATCCTAGAGGATGGGACTCCGGGACACTaGTCTCTAGGGGACACTGTGGATGCTGACAGGAGA +
Preference number: 3 (lower is better)
Translates to: CMAILEDGTPGH*SLGDTVDADRR
Trigger: TCTCCTGTCAGCATCCACAGTGTCCCCTAGAGAGCAGTGTCCCGGAGTCCCATCCTCTAGGATGGCCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR TCA 72 bp GCAATACTAGCACAGGCCACAATGGCCAGAGGAGGCTaGGGGGTTCTGAGAAGCTACCTGGCAGGAGCTACT +
Preference number: 3 (lower is better)
Translates to: AILAQATMARGG*GVLRSYLAGAT
Trigger: AGTAGCTCCTGCCAGGTAGCTTCTCAGAACCCCTCAGCCTCCTCTGGCCATTGTGGCCTGTGCTAGTATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR TCA 72 bp AGGAAGGCACTAGAGATGGCCCTATGGTCTCTGACCTaGGGTGGCCTGGGCCTTGAGGCACTAGAAGCTTCA +
Preference number: 3 (lower is better)
Translates to: RKALEMALWSLT*GGLGLEALEAS
Trigger: TGAAGCTTCTAGTGCCTCAAGGCCCAGGCCACCTCAGGTCAGAGACCATAGGGCCATCTCTAGTGCCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 72 bp CCAGAGGGAACAGGGAACCAGATTGTCCAGCATCCCTaGGTCGTGCAAAAAGCATTCATGGCCCTGCTCCCA +
Preference number: 3 (lower is better)
Translates to: PEGTGNQIVQHP*VVQKAFMALLP
Trigger: TGGGAGCAGGGCCATGAATGCTTTTTGCACGACGCAGGGATGCTGGACAATCTGGTTCCCTGTTCCCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CCA 72 bp ATGACTCCAGCCCAGATCCACAGAAGGAAATGGAGATaGTTCTGCCCTCACTACCTGCCTGGCCAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: MTPAQIHRRKWR*FCPHYLPGQLL
Trigger: CAGCAGCTGGCCAGGCAGGTAGTGAGGGCAGAACCATCTCCATTTCCTTCTGTGGATCTGGGCTGGAGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CCA 72 bp AAAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTaGCCAGTTGCCTGTGAAGCTGGAGCGCTTCACATG +
Preference number: 3 (lower is better)
Translates to: KTPSSHWRTHVL*PVACEAGALHM
Trigger: CATGTGAAGCGCTCCAGCTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 72 bp GAACAGGGAACCAGATTGTCCAGCATCCCTGCGTCGTaGAAAAAGCATTCATGGCCCTGCTCCCATGGAGGA +
Preference number: 3 (lower is better)
Translates to: EQGTRLSSIPAS*KKHSWPCSHGG
Trigger: TCCTCCATGGGAGCAGGGCCATGAATGCTTTTTGCACGACGCAGGGATGCTGGACAATCTGGTTCCCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CCA 72 bp ACTCTGATCTACCCACTGAGCCCTCCACCAACACTCTaGGACTCAAAGGCCATGCACGTCTCAGCAAACAGG +
Preference number: 3 (lower is better)
Translates to: TLIYPLSPPPTL*DSKAMHVSANR
Trigger: CCTGTTTGCTGAGACGTGCATGGCCTTTGAGTCCCAGAGTGTTGGTGGAGGGCTCAGTGGGTAGATCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CCA 72 bp AGAACACAGTCAGAAGCACTGTGGGCTTCCATAGAGTaGCCAGGCAGGACTGGCACTGCTAACTCACCTGGT +
Preference number: 3 (lower is better)
Translates to: RTQSEALWASIE*PGRTGTANSPG
Trigger: ACCAGGTGAGTTAGCAGTGCCAGTCCTGCCTGGCCACTCTATGGAAGCCCACAGTGCTTCTGACTGTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR TCA 72 bp CACAGGCCACAATGGCCAGAGGAGGCTGAGGGGTTCTaGGAAGCTACCTGGCAGGAGCTACTTCCTTTAAAA +
Preference number: 3 (lower is better)
Translates to: HRPQWPEEAEGF*EATWQELLPLK
Trigger: TTTTAAAGGAAGTAGCTCCTGCCAGGTAGCTTCTCAGAACCCCTCAGCCTCCTCTGGCCATTGTGGCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CCA 72 bp GGCCTTGAGGCACTAGAAGCTTCAAGTCACCATCCATaGGCAACACGTAGCAAAGGCAGCTTGGACAGACAG +
Preference number: 3 (lower is better)
Translates to: GLEALEASSHHP*ATRSKGSLDRQ
Trigger: CTGTCTGTCCAAGCTGCCTTTGCTACGTGTTGCCCATGGATGGTGACTTGAAGCTTCTAGTGCCTCAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CAA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCAGAGGAGTTACTGAATaGGTGCCTGCCTCTAGCTGG +
Preference number: 3 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSRGVTE*VPASSW
Trigger: CCAGCTAGAGGCAGGCACCAATTCAGTAACTCCTCT...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 72 bp TGGTGCCTGCCTCTAGCTGGCAGCTCCAGAAATCTGTaGTATTCAAGAATGGAACAGAGGCAGGTCTCTCCT +
Preference number: 3 (lower is better)
Translates to: WCLPLAGSSRNL*YSRMEQRQVSP
Trigger: AGGAGAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCTGCCAGCTAGAGGCAGGCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CAA 90 bp AAGAGTATCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGAGAACAGGGAACCAGATaGTCCAGCATCCCTGCGTCG +
Preference number: 3 (lower is better)
Translates to: KSILQGSVEMVLLSEAGGEQGTR*SSIPAS
Trigger: CGACGCAGGGATGCTGGACAATCTGGTTCCCTGTTC...TCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGATACTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CAA 90 bp AAGAGTATCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGAGCCTCTGGTCAGGGTTaGGGCAAGCAGATGGTAGTG +
Preference number: 3 (lower is better)
Translates to: KSILQGSVEMVLLSEAGGASGQG*GKQMVV
Trigger: CACTACCATCTGCTTGCCCAAACCCTGACCAGAGGC...TCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGATACTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR TCA 72 bp GCAAACAGGTGGTTGGTAATGCCCTGGGATATACCATaGCTCCAGCCCAGATCCACAGAAGGAAATGGAGAT +
Preference number: 3 (lower is better)
Translates to: ANRWLVMPWDIP*LQPRSTEGNGD
Trigger: ATCTCCATTTCCTTCTGTGGATCTGGGCTGGAGTCATGGTATATCCCAGGGCATTACCAACCACCTGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR TCA 72 bp TTTGGCCAGTTGCCTGTGAAGCTGGAGCGCTTCACATaGAGAGTATCCTGCAAGGCTCTGTGGAAATGGTAT +
Preference number: 3 (lower is better)
Translates to: FGQLPVKLERFT*RVSCKALWKWY
Trigger: ATACCATTTCCACAGAGCCTTGCAGGATACTCTTCATGTGAAGCGCTCCAGCTTCACAGGCAACTGGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 72 bp CAAGTAACACAAGGGCAGCTGGTTTCATTTGATGGCTaGCACTTCCAGCAACCACCATCCAAGATAGAGGCT +
Preference number: 3 (lower is better)
Translates to: QVTQGQLVSFDG*HFQQPPSKIEA
Trigger: AGCCTCTATCTTGGATGGTGGTTGCTGGAAGTGGCAGCCATCAAATGAAACCAGCTGCCCTTGTGTTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 72 bp AGATCCCAAAAGATCCCATCCACATTGAGCACCAAGTaGATGAGAGCAGAGCCTTCTGTGCAGACAGACAGA +
Preference number: 3 (lower is better)
Translates to: RSQKIPSTLSTK*MRAEPSVQTDR
Trigger: TCTGTCTGTCTGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTTTGGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CCA 72 bp GTGCTATTCAAGAATGGAACAGAGGCAGGTCTCTCCTaGCAGATTGTGGTGACAAGTGGAGTGACACTTGAC +
Preference number: 3 (lower is better)
Translates to: VLFKNGTEAGLS*QIVVTSGVTLD
Trigger: GTCAAGTGTCACTCCACTTGTCACCACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATTCTTGAATAGCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CAA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCATCAGCAAACAGGTGGTaGGTAATGCCCTGGGATATA +
Preference number: 3 (lower is better)
Translates to: KDPIHIEHQVHESRAFCASANRW*VMPWDI
Trigger: TATATCCCAGGGCATTACCAACCACCTGTTTGCTGA...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR TCA 72 bp CTCCAATCAAGTAACACAAGGGCAGCTGGTTTCATTTaGTGGCTGCCACTTCCAGCAACCACCATCCAAGAT +
Preference number: 3 (lower is better)
Translates to: LQSSNTRAAGFI*WLPLPATTIQD
Trigger: ATCTTGGATGGTGGTTGCTGGAAGTGGCAGCCATCAAATGAAACCAGCTGCCCTTGTGTTACTTGATTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR-3UTR CAA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCACCAGCAGAAAAGATTTaGAATGTAAAGACACCGGGA +
Preference number: 3 (lower is better)
Translates to: KDPIHIEHQVHESRAFCAPAEKI*NVKTPG
Trigger: TCCCGGTGTCTTTACATTCAAAATCTTTTCTGCTGG...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 72 bp TTAACAACCACAGCCCCTATACATCACGTTTCCAGCTaGAAGTTAGTGTTAGTCTGCTCCAAAAGGCAGTCA +
Preference number: 3 (lower is better)
Translates to: LTTTAPIHHVSS*KLVLVCSKRQS
Trigger: TGACTGCCTTTTGGAGCAGACTAACACTAACTTGCAGCTGGAAACGTGATGTATAGGGGCTGTGGTTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR GCA 72 bp GATGGTAGTGAAGTTTATACTGGGCTAATCAGACAATaGAGACAGTCCAGACTGAGTGTCAGCAATACTAGC +
Preference number: 3 (lower is better)
Translates to: DGSEVYTGLIRQ*RQSRLSVSNTS
Trigger: GCTAGTATTGCTGACACTCAGTCTGGACTGTCTGCATTGTCTGATTAGCCCAGTATAAACTTCACTACCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR TCA 72 bp CTACAGACACCTGTTAGCTGTGGTTCTTCGAGAATCTaGGAGTCAAACTTCAAACAAACTGCCAAGGATAAC +
Preference number: 3 (lower is better)
Translates to: LQTPVSCGSSRI*ESNFKQTAKDN
Trigger: GTTATCCTTGGCAGTTTGTTTGAAGTTTGACTCTCAGATTCTCGAAGAACCACAGCTAACAGGTGTCTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR TCA 72 bp CAAATCACTGGATTCCTGGAATCAACATCACAGATATaGGCTCATATTTACACAATCCACACAGCCGTGCTT +
Preference number: 3 (lower is better)
Translates to: QITGFLESTSQI*AHIYTIHTAVL
Trigger: AAGCACGGCTGTGTGGATTGTGTAAATATGAGCTCATATCTGTGATGTTGATTCCAGGAATCCAGTGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AGGGAGGAGCTGGGCTGGCTCCATCCCACGAGTCTCTGGGCTCCTGGAACCTTCCCCTGCGGACCCGGCTaGGCCTCACCAGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: REELGWLHPTSLWAPGTFPCGPG*ASPAAH
Trigger: ATGGGCTGCTGGTGAGGCCCAGCCGGGTCCGCAGGG...GAAGGTTCCAGGAGCCCAGAGACTCGTGGGATGGAGCCAGCCCAGCTCCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCGCTCAGGCTCTGGGGTaGCCTGACACAGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGAQALG*PDTGQG
Trigger: CCCCTGCCCTGTGTCAGGTCACCCCAGAGCCTGAGC...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp CACCCGAAAGTGCCAGCTTTCCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGCAGTGCCCACAGCCCTaGGGACCCGGCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: HPKVPAFPRSPPCPQSRQQCPQP*GPGWAS
Trigger: TGAGGCCCAGCCGGGTCCGCAGGGCTGTGGGCACTG...CTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGGAAAGCTGGCACTTTCGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCAGCGCTGCTGGGCACTaGGCGAGTGGAAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGSAAGH*ASGRRA
Trigger: GGCTCTCCTTCCACTCGCCCAGTGCCCAGCAGCGCT...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AGGGAGGAGCTGGGCTGGCTCCATCCCACGAGTCTCTGGGCTCCTGGAACCTTCAGGACAGCTGTGCACTaGAGAGTCCCAGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: REELGWLHPTSLWAPGTFRTAVH*RVPGGL
Trigger: GAGGCCTCCTGGGACTCTGCAGTGCACAGCTGTCCT...GAAGGTTCCAGGAGCCCAGAGACTCGTGGGATGGAGCCAGCCCAGCTCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp TGTGCCAGGAAGGCCACCCATCCTCCTAGCGCTCTAAGCAGCCTCTGGTCAGGGCAGCGGGGCTCACAGTaGCCACCATGGCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: CARKATHPPSALSSLWSGQRGSQ*PPWQSC
Trigger: GCAAGACTGCCATGGTGGCCACTGTGAGCCCCGCTG...CCCTGACCAGAGGCTGCTTAGAGCGCTAGGAGGATGGGTGGCCTTCCTGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCGTCCCAGGAGGCCTCTaGCTTCACCTCTCCATCGTG +
Preference number: 4 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGVPGGL*LHLSIV
Trigger: CACGATGGAGAGGTGAAGGCAGAGGCCTCCTGGGAC...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp ATAGAGGCTGCAGCTCTGGCCAGCCAGAGGCCAGAAAGCACAGGCAGGCATGTTGGAGCTGCAGGTACGTaGGCCTCCTCTGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: IEAAALASQRPESTGRHVGAAGT*ASSGAG
Trigger: TCCTGCCCCAGAGGAGGCCCACGTACCTGCAGCTCC...AACATGCCTGCCTGTGCTTTCTGGCCTCTGGCTGGCCAGAGCTGCAGCCTCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AGGGAGGAGCTGGGCTGGCTCCATCCCACGAGTCTCTGGGCTCCTGGAACCTTCCGCTTCTCCTCCTCATaGTGCTGTTCTAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: REELGWLHPTSLWAPGTFRFSSS*CCSRLL
Trigger: GAGCAGCCTAGAACAGCAGCATGAGGAGGAGAAGCG...GAAGGTTCCAGGAGCCCAGAGACTCGTGGGATGGAGCCAGCCCAGCTCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCACACCGCGGCAGTTCTaGCTCTCAGGAGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGTPRQF*LSGDSL
Trigger: AAGGCTGTCTCCTGAGAGGCAGAACTGCCGCGGTGT...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGCGCATCACCTCCACGTaGAGCCGGCCTGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRRITST*SRPATS
Trigger: AGAGGTGGCAGGCCGGCTGCACGTGGAGGTGATGCG...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp TGTGCCAGGAAGGCCACCCATCCTCCTAGCGCTCTAAGCAGCCTCTGGTCAGGGTCCCCATGGTGCAGCTaGATGGGGCTGGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: CARKATHPPSALSSLWSGSPWCS*MGLETE
Trigger: TTCTGTCTCCAGCCCCATCCAGCTGCACCATGGGGA...CCCTGACCAGAGGCTGCTTAGAGCGCTAGGAGGATGGGTGGCCTTCCTGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp ATAGAGGCTGCAGCTCTGGCCAGCCAGAGGCCAGAAAGCACAGGCAGGCATGTTTTCTCGTCGGTTCATTaGCCGGACCCGTACCGCCAC +
Preference number: 4 (lower is better)
Translates to: IEAAALASQRPESTGRHVFSSVH*PDPYRH
Trigger: GTGGCGGTACGGGTCCGGCCAATGAACCGACGAGAA...AACATGCCTGCCTGTGCTTTCTGGCCTCTGGCTGGCCAGAGCTGCAGCCTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp ACAGTCAGAAGCACTGTGGGCTTCCATAGAGTGGCCAGGCAGGACTGGCACTGCGGAGTCAGCACAACCTaGCCCTCGGGCGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: TVRSTVGFHRVARQDWHCGVSTT*PSGVMS
Trigger: AGACATCACGCCCGAGGGCCAGGTTGTGCTGACTCC...GCAGTGCCAGTCCTGCCTGGCCACTCTATGGAAGCCCACAGTGCTTCTGACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AGGGAGGAGCTGGGCTGGCTCCATCCCACGAGTCTCTGGGCTCCTGGAACCTTCGGAGTCAGCAGATGCTaGGTTTTCCACGTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: REELGWLHPTSLWAPGTFGVSRC*VFHVSC
Trigger: GCAGCTAACGTGGAAAACCCAGCATCTGCTGACTCC...GAAGGTTCCAGGAGCCCAGAGACTCGTGGGATGGAGCCAGCCCAGCTCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGACTTCTGCGGACCTCTaGGGCTCCCTGAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRTSADL*GSLRLE
Trigger: CTCCAGCCTCAGGGAGCCCCAGAGGTCCGCAGAAGT...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp TGTGCCAGGAAGGCCACCCATCCTCCTAGCGCTCTAAGCAGCCTCTGGTCAGGGTGTTGCCCAGGTATCTaGGAAGGTAGGCTGCACCAA +
Preference number: 4 (lower is better)
Translates to: CARKATHPPSALSSLWSGCCPGI*EGRLHQ
Trigger: TTGGTGCAGCCTACCTTCTCAGATACCTGGGCAACA...CCCTGACCAGAGGCTGCTTAGAGCGCTAGGAGGATGGGTGGCCTTCCTGGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp CACCCGAAAGTGCCAGCTTTCCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGCATACTCTCCCTCTCTaGGCCACTCAGGGACTTCGC +
Preference number: 4 (lower is better)
Translates to: HPKVPAFPRSPPCPQSRQHTLPL*ATQGLR
Trigger: GCGAAGTCCCTGAGTGGCTCAGAGAGGGAGAGTATG...CTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGGAAAGCTGGCACTTTCGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCGAGGATGGCTTTGTGTaGAGGAGAGGAAAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGEDGFV*RRGKPA
Trigger: AGCTGGCTTTCCTCTCCTGCACACAAAGCCATCCTC...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCAAAGAAGAGGTGCTCTaGGAACCTCCAGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGKEEVL*EPPALC
Trigger: GCACAGAGCTGGAGGTTCCCAGAGCACCTCTTCTTT...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp ACAGTCAGAAGCACTGTGGGCTTCCATAGAGTGGCCAGGCAGGACTGGCACTGCTCAGTGAAGCCAGGTTaGTGGCAGAGCCCGAGATGG +
Preference number: 4 (lower is better)
Translates to: TVRSTVGFHRVARQDWHCSVKPG*WQSPRW
Trigger: CCATCTCGGGCTCTGCCACCAACCTGGCTTCACTGA...GCAGTGCCAGTCCTGCCTGGCCACTCTATGGAAGCCCACAGTGCTTCTGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp TGTGCCAGGAAGGCCACCCATCCTCCTAGCGCTCTAAGCAGCCTCTGGTCAGGGATTCCAACTTTCTGGTaGCTTCACTCCACCTGTCCC +
Preference number: 4 (lower is better)
Translates to: CARKATHPPSALSSLWSGIPTFW*LHSTCP
Trigger: GGGACAGGTGGAGTGAAGTCACCAGAAAGTTGGAAT...CCCTGACCAGAGGCTGCTTAGAGCGCTAGGAGGATGGGTGGCCTTCCTGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGTGGGACACATCCTGTTaGCTTTCCCACCGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKWDTSC*LSHRPL
Trigger: CAAGGGCCGGTGGGAAAGTCAACAGGATGTGTCCCA...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCAGCCAGGGTTGCACCTaGAATACTGTTTCCCACCAA +
Preference number: 4 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGSQGCT*NTVSHQ
Trigger: TTGGTGGGAAACAGTATTTCAGGTGCAACCCTGGCT...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp TGTGCCAGGAAGGCCACCCATCCTCCTAGCGCTCTAAGCAGCCTCTGGTCAGGGGGTCCCAACACACTGTaGTCTCTCACTTTCAACGTC +
Preference number: 4 (lower is better)
Translates to: CARKATHPPSALSSLWSGGPNTL*SLTFNV
Trigger: GACGTTGAAAGTGAGAGAGCACAGTGTGTTGGGACC...CCCTGACCAGAGGCTGCTTAGAGCGCTAGGAGGATGGGTGGCCTTCCTGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCCAGGGGCCCCTGGAATaGCACTCCCAGCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSQGPLE*HSQQKA
Trigger: TGCCTTCTGCTGGGAGTGGCATTCCAGGGGCCCCTG...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp TGTGCCAGGAAGGCCACCCATCCTCCTAGCGCTCTAAGCAGCCTCTGGTCAGGGGGACACAAATCCTCTTaGGTAGGACCAGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: CARKATHPPSALSSLWSGGHKSS*VGPAAC
Trigger: ACATGCAGCTGGTCCTACGCAAGAGGATTTGTGTCC...CCCTGACCAGAGGCTGCTTAGAGCGCTAGGAGGATGGGTGGCCTTCCTGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCTTCAGAAAGAAGAGGTaGTCTGGGAACCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGFRKKR*SGNLQL
Trigger: GAGCTGGAGGTTCCCAGAGCACCTCTTCTTTCTGAA...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGAGTATCCTGTCCCCATaGTGCAGCTGGATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRSILSP*CSWMGL
Trigger: CAGCCCCATCCAGCTGCACCATGGGGACAGGATACT...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGTGTTTCAAGCGCTGCTaGGCACTGGGCGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRCFKRC*ALGEWK
Trigger: CTTCCACTCGCCCAGTGCCCAGCAGCGCTTGAAACA...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp ACAGTCAGAAGCACTGTGGGCTTCCATAGAGTGGCCAGGCAGGACTGGCACTGCCGAAACAGAGAGAGCTaGAGGGCCTGGAGCTATTCC +
Preference number: 4 (lower is better)
Translates to: TVRSTVGFHRVARQDWHCRNRES*RAWSYS
Trigger: GGAATAGCTCCAGGCCCTCCAGCTCTCTCTGTTTCG...GCAGTGCCAGTCCTGCCTGGCCACTCTATGGAAGCCCACAGTGCTTCTGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCAGCCAGCTCAGGCTCTaGGGTGACCTGACACAGGGC +
Preference number: 4 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSSQLRL*GDLTQG
Trigger: GCCCTGTGTCAGGTCACCCCAGAGCCTGAGCTGGCT...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AAGCACCTGAGCCCCATCTCTTCGGACCCACCCGAAAGTGCCAGCTTTCCCAAGTTTTTGAGGAGACTTTaGGCAAAGCCCTGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: KHLSPISSDPPESASFPKFLRRL*AKPWRP
Trigger: TGGGCGCCAGGGCTTTGCTCAAAGTCTCCTCAAAAA...CTTGGGAAAGCTGGCACTTTCGGGTGGGTCCGAAGAGATGGGGCTCAGGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGCTCTCAAGCTGCTTTTaGCGCTCCTGCGCAATCTCC +
Preference number: 4 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKLSSCF*RSCAIS
Trigger: GGAGATTGCGCAGGAGCGGCAAAAGCAGCTTGAGAG...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCTGTGGGGACATCTTTTaGAGCAATTACTTCCACCGG +
Preference number: 4 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGCGDIF*SNYFHR
Trigger: CCGGTGGAAGTAATTGCTGCAAAAGATGTCCCCACA...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AGGGAGGAGCTGGGCTGGCTCCATCCCACGAGTCTCTGGGCTCCTGGAACCTTCTCATTCACCACAGCATaGTTGACGATGTGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: REELGWLHPTSLWAPGTFSFTTA*LTMCFA
Trigger: AGCAAAGCACATCGTCAACCATGCTGTGGTGAATGA...GAAGGTTCCAGGAGCCCAGAGACTCGTGGGATGGAGCCAGCCCAGCTCCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGTGACAAGTGGAGTGACACGCTGGACACCTCACTaGAGGAGTCGCCGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: NGTEAGLSWQIVVTSGVTRWTPH*RSRRRH
Trigger: ATGCCGACGGCGACTCCTCCAGTGAGGTGTCCAGCG...TGTCACTCCACTTGTCACCACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp ATAGAGGCTGCAGCTCTGGCCAGCCAGAGGCCAGAAAGCACAGGCAGGCATGTTTGCCCAGAGCCTTCATaGTCACCTCCATCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: IEAAALASQRPESTGRHVCPEPS*SPPSVH
Trigger: ATGCACAGATGGAGGTGACCATGAAGGCTCTGGGCA...AACATGCCTGCCTGTGCTTTCTGGCCTCTGGCTGGCCAGAGCTGCAGCCTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp TGTGCCAGGAAGGCCACCCATCCTCCTAGCGCTCTAAGCAGCCTCTGGTCAGGGCTCCTTGTTTTTGCTTaGATGATCCCCAAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: CARKATHPPSALSSLWSGLLVFA*MIPKSH
Trigger: GTGGGACTTGGGGATCATCCAAGCAAAAACAAGGAG...CCCTGACCAGAGGCTGCTTAGAGCGCTAGGAGGATGGGTGGCCTTCCTGGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGTTGCTGCCTAGACTGTaGGATGGGCTAAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRLLPRL*DGLSSC
Trigger: GCAGGAGCTTAGCCCATCCCACAGTCTAGGCAGCAA...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGGAGAGCTGGAGGGCCTaGAGCTATTCCTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRESWRA*SYSSGN
Trigger: GTTTCCAGAGGAATAGCTCCAGGCCCTCCAGCTCTC...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCCCAGGATCAGGAGACTaGTTATTTTGGGGCGAAACA +
Preference number: 4 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGPGSGD*LFWGET
Trigger: TGTTTCGCCCCAAAATAACCAGTCTCCTGATCCTGG...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCCACAGGAACAACTCATAAGATTCGGGGCACGGGCTaGTGTGCAAGGGGAGATGAG +
Preference number: 4 (lower is better)
Translates to: PQSRQEHRVLSATGTTHKIRGTG*CARGDE
Trigger: CTCATCTCCCCTTGCACACCAGCCCGTGCCCCGAAT...CTTATGAGTTGTTCCTGTGGCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGACTCAAAGGGCTGGGTaGTCCATCCTGTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRTQRAG*SILSFW
Trigger: CCAGAAGGACAGGATGGACCACCCAGCCCTTTGAGT...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AGGGAGGAGCTGGGCTGGCTCCATCCCACGAGTCTCTGGGCTCCTGGAACCTTCTTGAAAACATCTTCTTaGCCTGCATACTTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: REELGWLHPTSLWAPGTFLKTSS*PAYFSR
Trigger: CCGAGAGAAGTATGCAGGTCAAGAAGATGTTTTCAA...GAAGGTTCCAGGAGCCCAGAGACTCGTGGGATGGAGCCAGCCCAGCTCCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp ATAGAGGCTGCAGCTCTGGCCAGCCAGAGGCCAGAAAGCACAGGCAGGCATGTTTTTTTGCCAGCACCCTaGTCAGCTAGGGCAGAGATA +
Preference number: 4 (lower is better)
Translates to: IEAAALASQRPESTGRHVFLPAP*SARAEI
Trigger: TATCTCTGCCCTAGCTGATCAGGGTGCTGGCAAAAA...AACATGCCTGCCTGTGCTTTCTGGCCTCTGGCTGGCCAGAGCTGCAGCCTCTAT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp TGTGCCAGGAAGGCCACCCATCCTCCTAGCGCTCTAAGCAGCCTCTGGTCAGGGTTGATTCCAGAAGTCTaGAGAGATATGCCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: CARKATHPPSALSSLWSGLIPEV*RDMPRL
Trigger: GAGCCTTGGCATATCTCTTCAGACTTCTGGAATCAA...CCCTGACCAGAGGCTGCTTAGAGCGCTAGGAGGATGGGTGGCCTTCCTGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp CCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCCACAGGAACAACTCATAAGCTCCTGCCGGCTTCCTaGCAATCTGTTCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: PQSRQEHRVLSATGTTHKLLPAS*QSVHAG
Trigger: CCCAGCATGAACAGATTGTCAGGAAGCCGGCAGGAG...CTTATGAGTTGTTCCTGTGGCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCGGTGATTTTGAAGACTaGATGGGAACGGCTACTTTC +
Preference number: 4 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGGDFED*MGTATF
Trigger: GAAAGTAGCCGTTCCCATGCAGTCTTCAAAATCACC...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AAGCACCTGAGCCCCATCTCTTCGGACCCACCCGAAAGTGCCAGCTTTCCCAAGTCGTGGCTCGTTCACTaGCAGCTAAATCCACTAAGC +
Preference number: 4 (lower is better)
Translates to: KHLSPISSDPPESASFPKSWLVH*QLNPLS
Trigger: GCTTAGTGGATTTAGCTGGCAGTGAACGAGCCACGA...CTTGGGAAAGCTGGCACTTTCGGGTGGGTCCGAAGAGATGGGGCTCAGGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGTGACAAGTGGAGTGACAATCCTGTCCCCATGGTaGAGCTGGATGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: NGTEAGLSWQIVVTSGVTILSPW*SWMGLE
Trigger: CTCCAGCCCCATCCAGCTGCACCATGGGGACAGGAT...TGTCACTCCACTTGTCACCACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp TCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATTTCTTAGCTGGAGCCCTGAACTaGGCCTGCGCCCAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SCKALWKWYYFQRQGDFLAGALN*ACAQCP
Trigger: TGGGCACTGGGCGCAGGCGCAGTTCAGGGCTCCAGC...TAAGAAATCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp TGTGCCAGGAAGGCCACCCATCCTCCTAGCGCTCTAAGCAGCCTCTGGTCAGGGACGATCTTTCAGCTCTaGAGATTTCATTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CARKATHPPSALSSLWSGTIFQL*RFHCLC
Trigger: GCAGAGGCAATGAAATCTCCAGAGCTGAAAGATCGT...CCCTGACCAGAGGCTGCTTAGAGCGCTAGGAGGATGGGTGGCCTTCCTGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGCAGTATGGACTGCATTaGGTCATTGCTGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRQYGLH*VIAAQS
Trigger: GCTCTGGGCAGCAATGACCCAATGCAGTCCATACTG...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCCACAGGAACAACTCATAAGAGGGGCAACGGTCACTaGCTCCTGCTGATCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PQSRQEHRVLSATGTTHKRGNGH*LLLIPE
Trigger: TTCTGGGATCAGCAGGAGCCAGTGACCGTTGCCCCT...CTTATGAGTTGTTCCTGTGGCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AGCTGGCAGCTCCAGAAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCCTCCATCCCAGGCACTaGGGTCCATTCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SWQLQKSVLFKNGTEAGLLHPRH*GPFCRG
Trigger: GCCCCTGCAGAATGGACCCCAGTGCCTGGGATGGAG...GAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCTGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp TGTGCCAGGAAGGCCACCCATCCTCCTAGCGCTCTAAGCAGCCTCTGGTCAGGGAATATAACAGGAATGTaGGTCTCCATCCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: CARKATHPPSALSSLWSGNITGM*VSIPGT
Trigger: AGTGCCTGGGATGGAGACCCACATTCCTGTTATATT...CCCTGACCAGAGGCTGCTTAGAGCGCTAGGAGGATGGGTGGCCTTCCTGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGCTTCACTCAAAGGGCTaGGTGGTCCATCCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRLHSKG*VVHPVL
Trigger: AAGGACAGGATGGACCACCCAGCCCTTTGAGTGAAG...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGTGACAAGTGGAGTGACATACGTGGGCCTCCTCTaGGGCAGGAGGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: NGTEAGLSWQIVVTSGVTYVGLL*GRRMAL
Trigger: CAAAGCCATCCTCCTGCCCCAGAGGAGGCCCACGTA...TGTCACTCCACTTGTCACCACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCAGGATGGCAGGTTCACTaGGGAGAGAGCCTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: KDPIHIEHQVHESRAFCAGWQVH*GESLAS
Trigger: GGAAGCGAGGCTCTCTCCTCAGTGAACCTGCCATCC...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCGACTTCACTTCAACTTaGACTCGCCGAGACTGCCCC +
Preference number: 4 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSDFTST*TRRDCP
Trigger: GGGGCAGTCTCGGCGAGTTCAAGTTGAAGTGAAGTC...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp TCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATTTCTTAACCTCTGGGGCTCCCTaGGGCTGGAGCCCTGAACTG +
Preference number: 4 (lower is better)
Translates to: SCKALWKWYYFQRQGDFLTSGAP*GWSPEL
Trigger: CAGTTCAGGGCTCCAGCCTCAGGGAGCCCCAGAGGT...TAAGAAATCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGCAGGTTGGTCAGCAGTaGCCATCATGGTGTAAGACT +
Preference number: 4 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKQVGQQ*PSWCKT
Trigger: AGTCTTACACCATGATGGGCACTGCTGACCAACCTG...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp TGTGCCAGGAAGGCCACCCATCCTCCTAGCGCTCTAAGCAGCCTCTGGTCAGGGGGTCACCTCCATCTGTaGATACTCAAAGTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: CARKATHPPSALSSLWSGGHLHL*ILKVEV
Trigger: AACTTCAACTTTGAGTATGCACAGATGGAGGTGACC...CCCTGACCAGAGGCTGCTTAGAGCGCTAGGAGGATGGGTGGCCTTCCTGGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGTTCTCCTCCTCATGCTaGTGTTCTAGGCTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKFSSSC*CSRLLS
Trigger: ACTGAGCAGCCTAGAACAGCAGCATGAGGAGGAGAA...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AAGAGTATCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGACACGTGCAGCCGGCCTaGCACCTCTCCCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: KSILQGSVEMVLLSEAGGHVQPA*HLSLLV
Trigger: AACCAGAAGGGAGAGGTGGCAGGCCGGCTGCACGTG...TCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGATACTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp CCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCCACAGGAACAACTCATAAGCATCTCCAGGAGCTGTaGCTCTCGGTCAGCATCATC +
Preference number: 4 (lower is better)
Translates to: PQSRQEHRVLSATGTTHKHLQEL*LSVSII
Trigger: GATGATGCTGACCGAGAGGCACAGCTCCTGGAGATG...CTTATGAGTTGTTCCTGTGGCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGTGCCCGTCTTGTTGGTaGCCACAACAACATACTCTC +
Preference number: 4 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKCPSCW*PQQHTL
Trigger: GAGAGTATGTTGTTGTGGGCACCAACAAGACGGGCA...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGTCACAGTGGCCACCATaGCAGTCTTGCTATTACCTC +
Preference number: 4 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKSQWPP*QSCYYL
Trigger: GAGGTAATAGCAAGACTGCCATGGTGGCCACTGTGA...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGTATTGGCATCCAGACTaGAGGTTGGAATCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRYWHPD*RLESGG
Trigger: CCCTCCAGATTCCAACCTCCAGTCTGGATGCCAATA...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCATTCTGCAGGGGCCCCTaGAATGCCACTCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: KDPIHIEHQVHESRAFCAFCRGP*NATPSR
Trigger: TCTGCTGGGAGTGGCATTCCAGGGGCCCCTGCAGAA...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CACCCGAAAGTGCCAGCTTTCCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGTCCCTGGGCATCCTCTaGAATATTGGAGACGATTTC +
Preference number: 4 (lower is better)
Translates to: HPKVPAFPRSPPCPQSRQSLGIL*NIGDDF
Trigger: GAAATCGTCTCCAATATTCCAGAGGATGCCCAGGGA...CTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGGAAAGCTGGCACTTTCGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGAACCACCATGGGAGATaGAGGGGAAGACACTTTGAC +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRNHHGR*RGRHFD
Trigger: GTCAAAGTGTCTTCCCCTCCATCTCCCATGGTGGTT...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGTGTCATCCCCAACCTTaGTTCCAGAAGTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKCHPQP*FQKSEE
Trigger: CTCTTCAGACTTCTGGAATCAAGGTTGGGGATGACA...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp TGTGCCAGGAAGGCCACCCATCCTCCTAGCGCTCTAAGCAGCCTCTGGTCAGGGGATTATCCTGAGAGCTaGAATCATCCGCATTTAAGT +
Preference number: 4 (lower is better)
Translates to: CARKATHPPSALSSLWSGDYPES*NHPHLS
Trigger: ACTTAAATGCGGATGATTTCAGCTCTCAGGATAATC...CCCTGACCAGAGGCTGCTTAGAGCGCTAGGAGGATGGGTGGCCTTCCTGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp CCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCCACAGGAACAACTCATAAGTTCGTCATAGTTATCTaGAGCGGGGCTCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: PQSRQEHRVLSATGTTHKFVIVI*SGAHSG
Trigger: GCCACTGTGAGCCCCGCTGCAGATAACTATGACGAA...CTTATGAGTTGTTCCTGTGGCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGTGACAAGTGGAGTGACAGTCGTTTTTCAGGGATaGCTCACGGTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: NGTEAGLSWQIVVTSGVTVVFQG*LTVLVL
Trigger: GAGGACGAGGACCGTGAGGCATCCCTGAAAAACGAC...TGTCACTCCACTTGTCACCACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGTGGGCACTGGGCGAGTaGAAGGAGAGCCGGTCCACA +
Preference number: 4 (lower is better)
Translates to: KSVLFKNGTEAGLSWQIVWALGE*KESRST
Trigger: TGTGGACCGGCTCTCCTTCCACTCGCCCAGTGCCCA...CACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp ATAGAGGCTGCAGCTCTGGCCAGCCAGAGGCCAGAAAGCACAGGCAGGCATGTTATCCAGACTGGAGGTTaGAATCTGGAGGGTAACTTT +
Preference number: 4 (lower is better)
Translates to: IEAAALASQRPESTGRHVIQTGG*NLEGNF
Trigger: AAAGTTACCCTCCAGATTCCAACCTCCAGTCTGGAT...AACATGCCTGCCTGTGCTTTCTGGCCTCTGGCTGGCCAGAGCTGCAGCCTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGGTCCATATACTTCAATaGCTAGGGCCCCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRVHILQ*LGPLLR
Trigger: TCTCAGAAGGGGCCCTAGCCATTGAAGTATATGGAC...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp TCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATTTCTTATGCCCCTGTCGGAGCTaGAAGATCCCTCCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SCKALWKWYYFQRQGDFLCPCRS*KIPPVG
Trigger: CCCCACAGGAGGGATCTTCCAGCTCCGACAGGGGCA...TAAGAAATCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGCAGTCATTTCCTGGATaGGTTTCTCCGATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKQSFPG*VSPILP
Trigger: TGGAAGAATCGGAGAAACTCATCCAGGAAATGACTG...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AAGAGTATCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGAGTTCGTGTTCGTACATaGGCCTCTGGCGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: KSILQGSVEMVLLSEAGGVRVRT*ASGAPE
Trigger: CTCTGGAGCGCCAGAGGCTCATGTACGAACACGAAC...TCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGATACTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp CCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCCACAGGAACAACTCATAAGTTGTTTTTGCTTGGATaGTCCCCAAGTCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: PQSRQEHRVLSATGTTHKLFLLG*SPSPTG
Trigger: CCCTGTGGGACTTGGGGATCATCCAAGCAAAAACAA...CTTATGAGTTGTTCCTGTGGCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGACACCCAATGCCAACTaGCAATATGCACTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRTPNAN*QYALFH
Trigger: ATGGAAGAGTGCATATTGTCAGTTGGCATTGGGTGT...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGTCATCGAGATTATCCTaGGAGCTGAAATCATCCGCA +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRSSRLS*ELKSSA
Trigger: TGCGGATGATTTCAGCTCTCAGGATAATCTCGATGA...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCAGTGCCCTTACTGAGTTaGGGACAGCTGTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: KDPIHIEHQVHESRAFCAVPLLS*GQLCTA
Trigger: TGCAGTGCACAGCTGTCCTCAACTCAGTAAGGGCAC...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCACAGGTGTGCCCTTACTaGGTTGAGGACAGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: KDPIHIEHQVHESRAFCAQVCPY*VEDSCA
Trigger: TGCACAGCTGTCCTCAACTCAGTAAGGGCACACCTG...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGAAGTCTGAAGAGATATaGCAAGGCTCTCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKKSEEI*QGSQAA
Trigger: AGCAGCTTGAGAGCCTTGGCATATCTCTTCAGACTT...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCGCTGCTGTTCTAGGCTaGTCAGTATGGACTGCATTG +
Preference number: 4 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSAAVLG*SVWTAL
Trigger: CAATGCAGTCCATACTGAGCAGCCTAGAACAGCAGC...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGTGACAAGTGGAGTGACAAGGATCGTCTCCTCCTaGAATCCTCTCCCCAATAGC +
Preference number: 4 (lower is better)
Translates to: NGTEAGLSWQIVVTSGVTRIVSS*NPLPNS
Trigger: GCTATTGGGGAGAGGATTGCAGGAGGAGACGATCCT...TGTCACTCCACTTGTCACCACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AAGCACCTGAGCCCCATCTCTTCGGACCCACCCGAAAGTGCCAGCTTTCCCAAGCTTTCACACACCCAATaGCAACTGACAATATGCACT +
Preference number: 4 (lower is better)
Translates to: KHLSPISSDPPESASFPKLSHTQ*QLTICT
Trigger: AGTGCATATTGTCAGTTGGCATTGGGTGTGTGAAAG...CTTGGGAAAGCTGGCACTTTCGGGTGGGTCCGAAGAGATGGGGCTCAGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGTGACAAGTGGAGTGACAGTTTTCCACGTTAGCTaGCATCCTTGCCAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: NGTEAGLSWQIVVTSGVTVFHVS*HPCQCL
Trigger: GAGGCACTGGCAAGGATGGCAGCTAACGTGGAAAAC...TGTCACTCCACTTGTCACCACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCGGAAGATCCCTCCTGTaGGGACATCTTTTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSGRSLL*GHLLQQ
Trigger: TTGCTGCAAAAGATGTCCCCACAGGAGGGATCTTCC...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGTCCTCCTCTTCCTCATaGACATTCTCGTGGATCTTA +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRSSSSS*TFSWIL
Trigger: TAAGATCCACGAGAATGTCCATGAGGAAGAGGAGGA...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AGCTGGCAGCTCCAGAAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCCGCTCCTCCACTCCCTaGGCATCCTCTGGAATATTG +
Preference number: 4 (lower is better)
Translates to: SWQLQKSVLFKNGTEAGLRSSTP*ASSGIL
Trigger: CAATATTCCAGAGGATGCCCAGGGAGTGGAGGAGCG...GAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCTGCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGTGACAAGTGGAGTGACATCCATCCTGTCCTTCTaGGGGCTGAGTAACCACCAT +
Preference number: 4 (lower is better)
Translates to: NGTEAGLSWQIVVTSGVTSILSF*GLSNHH
Trigger: ATGGTGGTTACTCAGCCCCCAGAAGGACAGGATGGA...TGTCACTCCACTTGTCACCACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCTTTCCGGATTCTGAATaGGGACGTGGGTACAGCAGA +
Preference number: 4 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSFPDSE*GRGYSR
Trigger: TCTGCTGTACCCACGTCCCCATTCAGAATCCGGAAA...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CACCCGAAAGTGCCAGCTTTCCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGATCCATGTTCCCTCCTaGAAATCAGTTGGTCCAATA +
Preference number: 4 (lower is better)
Translates to: HPKVPAFPRSPPCPQSRQIHVPS*KSVGPI
Trigger: TATTGGACCAACTGATTTCCAGGAGGGAACATGGAT...CTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGGAAAGCTGGCACTTTCGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AGCTGGCAGCTCCAGAAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCAACTCCTGTCTCCCTTaGCCAGTGCAGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SWQLQKSVLFKNGTEAGLNSCLP*PVQLSV
Trigger: CACTGACAGCTGCACTGGCCAAGGGAGACAGGAGTT...GAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCTGCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AGCTGGCAGCTCCAGAAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCGTTCTGGTGTTCTTCTaGGGAGTCAGCACAACCTGG +
Preference number: 4 (lower is better)
Translates to: SWQLQKSVLFKNGTEAGLVLVFF*GVSTTW
Trigger: CCAGGTTGTGCTGACTCCTCAGAAGAACACCAGAAC...GAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCTGCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp CACCCGAAAGTGCCAGCTTTCCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGTTCTGTTCCAAGATCTaGACCCAGAATTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: HPKVPAFPRSPPCPQSRQFCSKI*TQNSNF
Trigger: AAAGTTGGAATTCTGGGTTCAGATCTTGGAACAGAA...CTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGGAAAGCTGGCACTTTCGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCAGAGAAGTAGCCACTTaGAGCTTCACTCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSREVAT*SFTQRA
Trigger: AGCCCTTTGAGTGAAGCTTCAAGTGGCTACTTCTCT...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGCAGTGCAGCTGTCAGTaGAGCCAGGTTGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KSVLFKNGTEAGLSWQIVQCSCQ*SQVGGR
Trigger: TCTGCCACCAACCTGGCTTCACTGACAGCTGCACTG...CACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp TCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATTTCTTACCAGGGCTGCCTTGTTaGGCCTCCTCTGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: SCKALWKWYYFQRQGDFLPGLPC*ASSVLV
Trigger: AACAAGGACAGAGGAGGCTCAACAAGGCAGCCCTGG...TAAGAAATCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGGCTGTTATTCAATGTTaGTTCTCTCTCTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRAVIQC*FSLFSP
Trigger: TGGGCTGAAGAGAGAGAAGCAACATTGAATAACAGC...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp CACCCGAAAGTGCCAGCTTTCCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGTCCAAAGACCAAATCTaGTTTCCTTTGCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: HPKVPAFPRSPPCPQSRQSKDQI*FPLPFL
Trigger: AAGAAAGGGCAAAGGAAAGCAGATTTGGTCTTTGGA...CTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGGAAAGCTGGCACTTTCGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGTGCCAACTGACAATATaGACTCTTCCATCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKCQLTI*TLPSVV
Trigger: TACCACTGATGGAAGAGTGCATATTGTCAGTTGGCA...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGTGTTGTTTCACAATCTaGAGCTCAAAGAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRCCFTI*SSKNSS
Trigger: GGAGGAGTTCTTTGAGCTGCAGATTGTGAAACAACA...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGTTAGCTGCCATCCTTaGCAGTGCCTCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KSVLFKNGTEAGLSWQIVVSCHP*QCLSLL
Trigger: GAGGAGCGAGAGGCACTGGCAAGGATGGCAGCTAAC...CACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGCTTTGAGTAGGAGCTaGAGGTACGTGGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KSVLFKNGTEAGLSWQIVALSRS*RYVGLL
Trigger: GAGGAGGCCCACGTACCTGCAGCTCCTACTCAAAGC...CACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp ATAGAGGCTGCAGCTCTGGCCAGCCAGAGGCCAGAAAGCACAGGCAGGCATGTTTTGAGTCTGAAGAAATaGTTGTTTCCCCACAGTATC +
Preference number: 4 (lower is better)
Translates to: IEAAALASQRPESTGRHVLSLKK*LFPHSI
Trigger: GATACTGTGGGGAAACAACCATTTCTTCAGACTCAA...AACATGCCTGCCTGTGCTTTCTGGCCTCTGGCTGGCCAGAGCTGCAGCCTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCAAGCCTCGCTTCCTATTaGCATCCAGACTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: KDPIHIEHQVHESRAFCASLASY*HPDWRL
Trigger: CAACCTCCAGTCTGGATGCCAATAGGAAGCGAGGCT...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AGCTGGCAGCTCCAGAAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCACCAGCCTGTTCTCCTaGGCTTCCTTTTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SWQLQKSVLFKNGTEAGLTSLFS*ASFSEL
Trigger: CAGCTCTGAAAAGGAAGCCCAGGAGAACAGGCTGGT...GAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCTGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AGCTGGCAGCTCCAGAAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCCACAACCATACACTGTaGCTGCTTGCTGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SWQLQKSVLFKNGTEAGLHNHTL*LLAGGR
Trigger: TCTCCCACCAGCAAGCAGCCACAGTGTATGGTTGTG...GAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCTGCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AAGAGTATCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATGCATGTCGGCAGGATaGCTGAGCTGGACAGTCACT +
Preference number: 4 (lower is better)
Translates to: KSILQGSVEMVLLSEAGGCMSAG*LSWTVT
Trigger: AGTGACTGTCCAGCTCAGCCATCCTGCCGACATGCA...TCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGATACTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AGCTGGCAGCTCCAGAAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCCACCAGGGACTTCACTaGGTTCAAGTAAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SWQLQKSVLFKNGTEAGLHQGLH*VQVRGC
Trigger: GCAGCCTCTTACTTGAACCCAGTGAAGTCCCTGGTG...GAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCTGCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCAAGACTTCAGCAGCTTTaGCATCTGTGGCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: KDPIHIEHQVHESRAFCARLQQL*HLWHQG
Trigger: TCCCTGGTGCCACAGATGCCAAAGCTGCTGAAGTCT...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CAA 72 bp AGTCACCATCCATGGGCAACACGTAGCAAAGGCAGCTaGGACAGACAGGTAAATGCTACATGGGTCACTCAC +
Preference number: 4 (lower is better)
Translates to: SHHPWATRSKGS*DRQVNATWVTH
Trigger: GTGAGTGACCCATGTAGCATTTACCTGTCTGTCCAAGCTGCCTTTGCTACGTGTTGCCCATGGATGGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCAGTCACTGGCTCCTGCTaGTCCCAGAAGTCATATTTG +
Preference number: 4 (lower is better)
Translates to: KDPIHIEHQVHESRAFCAVTGSC*SQKSYL
Trigger: CAAATATGACTTCTGGGATCAGCAGGAGCCAGTGAC...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGTCCAGCTCTGTGCTTTaGGTAGGAGCTGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: KSVLFKNGTEAGLSWQIVSSSVL*VGAAGT
Trigger: CGTACCTGCAGCTCCTACTCAAAGCACAGAGCTGGA...CACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCAGGGATTAATCCAGGTTaGTCAGCAGTGCCCATCATG +
Preference number: 4 (lower is better)
Translates to: KDPIHIEHQVHESRAFCAGINPG*SAVPIM
Trigger: CATGATGGGCACTGCTGACCAACCTGGATTAATCCC...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGCAGCTCCGGTTTTCGTaGCTCGTTCACTGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: KSVLFKNGTEAGLSWQIVQLRFS*LVHCQL
Trigger: TAGCTGGCAGTGAACGAGCCACGAAAACCGGAGCTG...CACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCACTAGGCTGCTCAGTATaGACTGCATTGGGTCATTGC +
Preference number: 4 (lower is better)
Translates to: KDPIHIEHQVHESRAFCALGCSV*TALGHC
Trigger: GCAATGACCCAATGCAGTCCATACTGAGCAGCCTAG...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCCTGCTCATCATAGAATaGGTCAGCACGCTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSLLIIE*VSTLEV
Trigger: TACTTCAAGCGTGCTGACCCATTCTATGATGAGCAG...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGCATCCTCTGGAATATTaGAGACGATTTCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRHPLEY*RRFQRS
Trigger: TGACCTTTGAAATCGTCTCCAATATTCCAGAGGATG...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
3UTR CAA 72 bp ATGTGTGCCATGAGATCCCAAAAGATCCCATCCACATaGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: MCAMRSQKIPST*STKCMRAEPSV
Trigger: CACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTTTGGGATCTCATGGCACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AGCTGGCAGCTCCAGAAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCGAGGGGAAGACACTTTaGCAGGTTTGTCACAGATCT +
Preference number: 4 (lower is better)
Translates to: SWQLQKSVLFKNGTEAGLEGKTL*QVCHRS
Trigger: AGATCTGTGACAAACCTGTCAAAGTGTCTTCCCCTC...GAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCTGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp CACCCGAAAGTGCCAGCTTTCCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGATTTATTTTTGTTTTTaGCAGCACCCTGATCAGCTA +
Preference number: 4 (lower is better)
Translates to: HPKVPAFPRSPPCPQSRQIYFCF*QHPDQL
Trigger: TAGCTGATCAGGGTGCTGGCAAAAACAAAAATAAAT...CTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGGAAAGCTGGCACTTTCGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCAAGACTCCTTGTTTTTaGTTGGATGATCCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSKTPCF*LDDPQV
Trigger: GACTTGGGGATCATCCAAGCAAAAACAAGGAGTCTT...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp TCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATTTCTTACAAGTCCCACAGGGCTaGGTTTTTCCGGGGATCATT +
Preference number: 4 (lower is better)
Translates to: SCKALWKWYYFQRQGDFLQVPQG*VFPGII
Trigger: AATGATCCCCGGAAAAACCCAGCCCTGTGGGACTTG...TAAGAAATCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCAATCCCATCCTGCTTCTaGGTCATCGAGATTATCCTG +
Preference number: 4 (lower is better)
Translates to: KDPIHIEHQVHESRAFCAIPSCF*VIEIIL
Trigger: CAGGATAATCTCGATGACCCAGAAGCAGGATGGGAT...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCAGGTGAGACATCTTTTTaGGGAGACTTTGAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: KDPIHIEHQVHESRAFCAGETSF*GDFEQS
Trigger: GCTTTGCTCAAAGTCTCCTCAAAAAGATGTCTCACC...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp TCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATTTCTTACCACTAAGCTCAGCTTaGCCACTTTCTCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: SCKALWKWYYFQRQGDFLPLSSA*PLSLQM
Trigger: CATCTGGAGAGAAAGTGGGCAAGCTGAGCTTAGTGG...TAAGAAATCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp AAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGCCACCATGGCAGTCTTaGTATTACCTCCCAGACTGT +
Preference number: 4 (lower is better)
Translates to: KSVLFKNGTEAGLSWQIVPPWQS*YYLPDC
Trigger: ACAGTCTGGGAGGTAATAGCAAGACTGCCATGGTGG...CACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp TCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATTTCTTAGGTAGCATCCCATCCTaGTTCTGGGTCATCGAGATT +
Preference number: 4 (lower is better)
Translates to: SCKALWKWYYFQRQGDFLGSIPS*FWVIEI
Trigger: AATCTCGATGACCCAGAAGCAGGATGGGATGCTACC...TAAGAAATCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGTGTTTCTGACAGGGTaGCAGAAGAGACACTGTGAG +
Preference number: 4 (lower is better)
Translates to: KSVLFKNGTEAGLSWQIVVFLTG*QKRHCE
Trigger: CTCACAGTGTCTCTTCTGCCACCCTGTCAGAAACAC...CACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCTTTTGTCATGTTTACTaGCAAGCTTCTGCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSFCHVY*QASAVV
Trigger: AACAACTGCAGAAGCTTGTCAGTAAACATGACAAAA...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGGAATAGAGCTCCGGTaGGACATCTTTTTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: KSVLFKNGTEAGLSWQIVGIELR*DIFLRR
Trigger: TCTCCTCAAAAAGATGTCTCACCGGAGCTCTATTCC...CACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AGCTGGCAGCTCCAGAAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCGGACAGATTCATCCATaGACCAGAAACAGTGATCAT +
Preference number: 4 (lower is better)
Translates to: SWQLQKSVLFKNGTEAGLGQIHP*TRNSDH
Trigger: ATGATCACTGTTTCTGGTCCATGGATGAATCTGTCC...GAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCTGCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AAGAGTATCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGAGAGTTCATTCAGAGCTaGGTCAGCATTCAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: KSILQGSVEMVLLSEAGGEFIQS*VSIQVN
Trigger: GTTAACCTGAATGCTGACCCAGCTCTGAATGAACTC...TCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGATACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AAGAGTATCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGACTGGAGGTTGGAATCTaGAGGGTAACTTTATACTCG +
Preference number: 4 (lower is better)
Translates to: KSILQGSVEMVLLSEAGGLEVGI*RVTLYS
Trigger: CGAGTATAAAGTTACCCTCCAGATTCCAACCTCCAG...TCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGATACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp TCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATTTCTTACCATCAAATGCATTCTaGAGAATGTTCTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SCKALWKWYYFQRQGDFLPSNAF*RMFSPR
Trigger: CCTTGGGGAGAACATTCTTCAGAATGCATTTGATGG...TAAGAAATCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR TCA 90 bp AAGAGTATCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGAGTTTGGTTAATGCATTaGGCCATTTTCTACGAAGCC +
Preference number: 4 (lower is better)
Translates to: KSILQGSVEMVLLSEAGGVWLMH*AIFYEA
Trigger: GGCTTCGTAGAAAATGGCTCAATGCATTAACCAAAC...TCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGATACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp TCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATTTCTTAAGAAGGCACCATCACTaGATTTCTTTCCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SCKALWKWYYFQRQGDFLRRHHH*ISFLCE
Trigger: CTCACAGAGGAAAGAAATGCAGTGATGGTGCCTTCT...TAAGAAATCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CCA 90 bp AAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGACTGTTTCCCACCAATaGAGCCATCATTCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: KSVLFKNGTEAGLSWQIVTVSHQ*SHHSFL
Trigger: CAGGAAAGAATGATGGCTCCATTGGTGGGAAACAGT...CACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp TCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATTTCTTATTTATCCAACTCTTCTaGGATGTAACTAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: SCKALWKWYYFQRQGDFLFIQLF*DVTSFP
Trigger: CGGGAAGCTAGTTACATCGCAGAAGAGTTGGATAAA...TAAGAAATCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR GCA 90 bp TCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATTTCTTACCCAGAAGTCATATTTaGAGAAGACAAAGTGACACA +
Preference number: 4 (lower is better)
Translates to: SCKALWKWYYFQRQGDFLPRSHI*RRQSDT
Trigger: TGTGTCACTTTGTCTTCTGCAAATATGACTTCTGGG...TAAGAAATCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS GCA 90 bp GAGGCTGGAGCCCTGAACTGCGCCTGCGCCCAGTGCCCACAGCCCTaGGGACCCGGCTGGGCCTCACCAGCAGCCCATAGCCAGGGTTGC +
Preference number: 5 (lower is better)
Translates to: EAGALNCACAQCPQP*GPGWASPAAHSQGC
Trigger: GCAACCCTGGCTATGGGCTGCTGGTGAGGCCCAGCCGGGTCCGCAGGGCTGTGGGCACTGGGCGCAGGCGCAGTTCAGGGCTCCAGCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 90 bp CTCTCTTCAGCCCACTGTTTCAAGCGCTGCTGGGCACTGGGCGAGTaGAAGGAGAGCCGGTCCACACCGCGGCAGTTCTGCCTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: LSSAHCFKRCWALGE*KESRSTPRQFCLSG
Trigger: TCCTGAGAGGCAGAACTGCCGCGGTGTGGACCGGCTCTCCTTCCACTCGCCCAGTGCCCAGCAGCGCTTGAAACAGTGGGCTGAAGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 90 bp GCACTGGGCGAGTGGAAGGAGAGCCGGTCCACACCGCGGCAGTTCTaGCTCTCAGGAGACAGCCTTCTTCGAAGCTGTTCCAGTTCGTGT +
Preference number: 5 (lower is better)
Translates to: ALGEWKESRSTPRQF*LSGDSLLRSCSSSC
Trigger: ACACGAACTGGAACAGCTTCGAAGAAGGCTGTCTCCTGAGAGGCAGAACTGCCGCGGTGTGGACCGGCTCTCCTTCCACTCGCCCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AGGGAGGAGCTGGGCTGGCTCCATCCCACGAGTCTCTGGGCTCCTGGAACCTTCGCCACCATGGCAGTCTaGCTATTACCTCCCAGACTG +
Preference number: 5 (lower is better)
Translates to: REELGWLHPTSLWAPGTFATMAV*LLPPRL
Trigger: CAGTCTGGGAGGTAATAGCAAGACTGCCATGGTGGC...GAAGGTTCCAGGAGCCCAGAGACTCGTGGGATGGAGCCAGCCCAGCTCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS TCA 90 bp AGGGCTGCCTTGTTGAGCCTCCTCTGTCCTTGTTGCCCAGGTATCTaGGAAGGTAGGCTGCACCAAGATTCGGGGCACGGGCTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: RAALLSLLCPCCPGI*EGRLHQDSGHGLVC
Trigger: GCACACCAGCCCGTGCCCCGAATCTTGGTGCAGCCTACCTTCTCAGATACCTGGGCAACAAGGACAGAGGAGGCTCAACAAGGCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS CCA 90 bp CAGCTCTGTGCTTTGAGTAGGAGCTGCAGGTACGTGGGCCTCCTCTaGGGCAGGAGGATGGCTTTGTGTGCAGGAGAGGAAAGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: QLCALSRSCRYVGLL*GRRMALCAGEESQL
Trigger: GAGCTGGCTTTCCTCTCCTGCACACAAAGCCATCCTCCTGCCCCAGAGGAGGCCCACGTACCTGCAGCTCCTACTCAAAGCACAGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AGGGAGGAGCTGGGCTGGCTCCATCCCACGAGTCTCTGGGCTCCTGGAACCTTCGTTGTGAGGGACTTGTaGATGTTGCTGCCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: REELGWLHPTSLWAPGTFVVRDL*MLLPSF
Trigger: GAAGGAGGGCAGCAACATCAACAAGTCCCTCACAAC...GAAGGTTCCAGGAGCCCAGAGACTCGTGGGATGGAGCCAGCCCAGCTCCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp ACAGTCAGAAGCACTGTGGGCTTCCATAGAGTGGCCAGGCAGGACTGGCACTGCCTTTCCCACCGGCCCTaGTTGCTGCCTAGACTGTGG +
Preference number: 5 (lower is better)
Translates to: TVRSTVGFHRVARQDWHCLSHRP*LLPRLW
Trigger: CCACAGTCTAGGCAGCAACAAGGGCCGGTGGGAAAG...GCAGTGCCAGTCCTGCCTGGCCACTCTATGGAAGCCCACAGTGCTTCTGACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS TCA 90 bp ACCCAGGCGTCTGGCTGCCGAGGCCTGTGGTGTCCAGGCCTAAGGTaGGTGTTTCTGACAGGGTGGCAGAAGAGACACTGTGAGAGAAGT +
Preference number: 5 (lower is better)
Translates to: TQASGCRGLWCPGLR*VFLTGWQKRHCERS
Trigger: ACTTCTCTCACAGTGTCTCTTCTGCCACCCTGTCAGAAACACTCACCTTAGGCCTGGACACCACAGGCCTCGGCAGCCAGACGCCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 90 bp ATCTCGCTGGACACCTCACTGGAGGAGTCGCCGTCGGCATCCAGCTaGTCAGAACTACTGTCGTTTTTCAGGGATGCCTCACGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: ISLDTSLEESPSASS*SELLSFFRDASRSS
Trigger: CGAGGACCGTGAGGCATCCCTGAAAAACGACAGTAGTTCTGAGCAGCTGGATGCCGACGGCGACTCCTCCAGTGAGGTGTCCAGCGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 90 bp CTCGTCAGCAGGTGTGCCCTTACTGAGTTGAGGACAGCTGTGCACTaGAGAGTCCCAGGAGGCCTCTGCCTTCACCTCTCCATCGTGTTG +
Preference number: 5 (lower is better)
Translates to: LVSRCALTELRTAVH*RVPGGLCLHLSIVL
Trigger: CAACACGATGGAGAGGTGAAGGCAGAGGCCTCCTGGGACTCTGCAGTGCACAGCTGTCCTCAACTCAGTAAGGGCACACCTGCTGACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 90 bp CTCGGAGTCAGCAGATGCTGGGTTTTCCACGTTAGCTGCCATCCTTaGCAGTGCCTCTCGCTCCTCCACTCCCTGGGCATCCTCTGGAAT +
Preference number: 5 (lower is better)
Translates to: LGVSRCWVFHVSCHP*QCLSLLHSLGILWN
Trigger: ATTCCAGAGGATGCCCAGGGAGTGGAGGAGCGAGAGGCACTGGCAAGGATGGCAGCTAACGTGGAAAACCCAGCATCTGCTGACTCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 90 bp CACCGGCCCTTGTTGCTGCCTAGACTGTGGGATGGGCTAAGCTCCTaGCGGCTTCCTGACAATCTGTTCATGCTGGGGGAGCTGATACTC +
Preference number: 5 (lower is better)
Translates to: HRPLLLPRLWDGLSS*RLPDNLFMLGELIL
Trigger: GAGTATCAGCTCCCCCAGCATGAACAGATTGTCAGGAAGCCGGCAGGAGCTTAGCCCATCCCACAGTCTAGGCAGCAACAAGGGCCGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 90 bp CTCACCTCCTCTGTCCTTGTTGCCCAGGTATCTGAGAAGGTAGGCTaGACCAAGATTCGGGGCACGGGCTGGTGTGCAAGGGGAGATGAG +
Preference number: 5 (lower is better)
Translates to: LTSSVLVAQVSEKVG*TKIRGTGWCARGDE
Trigger: CTCATCTCCCCTTGCACACCAGCCCGTGCCCCGAATCTTGGTGCAGCCTACCTTCTCAGATACCTGGGCAACAAGGACAGAGGAGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100473.5
CDS CCA 90 bp GAGGCTGCCACGCCTCCCAGTCCAGGATCAGGAGACTGGTTATTTTaGGGCGAAACAGAGAGAGCTGGAGGGCCTGGAGCTATTCCTCTG +
Preference number: 5 (lower is better)
Translates to: EAATPPSPGSGDWLF*GETERAGGPGAIPL
Trigger: CAGAGGAATAGCTCCAGGCCCTCCAGCTCTCTCTGTTTCGCCCCAAAATAACCAGTCTCCTGATCCTGGACTGGGAGGCGTGGCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 90 bp CCCAGGACTTCCGGTTCTCAGGATTCTTGTAACTCCTGTCTCCCTTaGCCAGTGCAGCTGTCAGTGAAGCCAGGTTGGTGGCAGAGCCCG +
Preference number: 5 (lower is better)
Translates to: PRTSGSQDSCNSCLP*PVQLSVKPGWWQSP
Trigger: CGGGCTCTGCCACCAACCTGGCTTCACTGACAGCTGCACTGGCCAAGGGAGACAGGAGTTACAAGAATCCTGAGAACCGGAAGTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp ACAGTCAGAAGCACTGTGGGCTTCCATAGAGTGGCCAGGCAGGACTGGCACTGCGAGACTTCAGCAGCTTaGGCATCTGTGGCACCAGGG +
Preference number: 5 (lower is better)
Translates to: TVRSTVGFHRVARQDWHCETSAA*ASVAPG
Trigger: CCCTGGTGCCACAGATGCCAAAGCTGCTGAAGTCTC...GCAGTGCCAGTCCTGCCTGGCCACTCTATGGAAGCCCACAGTGCTTCTGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp CCCACAAAGATGCCTCTTAGAAACCCTGTGAGCCAGCCGTGCAGCAGGATGAGGGTCAGTGAAGCCAGGTaGGTGGCAGAGCCCGAGATG +
Preference number: 5 (lower is better)
Translates to: PTKMPLRNPVSQPCSRMRVSEAR*VAEPEM
Trigger: CATCTCGGGCTCTGCCACCAACCTGGCTTCACTGAC...CCTCATCCTGCTGCACGGCTGGCTCACAGGGTTTCTAAGAGGCATCTTTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS TCA 90 bp TGCCACTCCCAGCAGAAGGCACCATCACTGCATTTCTTTCCTCTGTaGGCGTCAGCCGCATCTCCAGGAGCTGTGCCTCTCGGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: CHSQQKAPSLHFFPL*ASAASPGAVPLGQH
Trigger: ATGCTGACCGAGAGGCACAGCTCCTGGAGATGCGGCTGACGCTCACAGAGGAAAGAAATGCAGTGATGGTGCCTTCTGCTGGGAGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 90 bp GGACCCGGCTGGGCCTCACCAGCAGCCCATAGCCAGGGTTGCACCTaGAATACTGTTTCCCACCAATGGAGCCATCATTCTTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: GPGWASPAAHSQGCT*NTVSHQWSHHSFLQ
Trigger: CTGCAGGAAAGAATGATGGCTCCATTGGTGGGAAACAGTATTTCAGGTGCAACCCTGGCTATGGGCTGCTGGTGAGGCCCAGCCGGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 90 bp CCTTCAGCCTGTCGCCCGCAGCTCCGGTTTTCGTGGCTCGTTCACTaGCAGCTAAATCCACTAAGCTCAGCTTGCCCACTTTCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: PSACRPQLRFSWLVH*QLNPLSSACPLSLQ
Trigger: CTGGAGAGAAAGTGGGCAAGCTGAGCTTAGTGGATTTAGCTGGCAGTGAACGAGCCACGAAAACCGGAGCTGCGGGCGACAGGCTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 90 bp AATATAGGCCTCGGAGTCAGCAGATGCTGGGTTTTCCACGTTAGCTaGCATCCTTGCCAGTGCCTCTCGCTCCTCCACTCCCTGGGCATC +
Preference number: 5 (lower is better)
Translates to: NIGLGVSRCWVFHVS*HPCQCLSLLHSLGI
Trigger: GATGCCCAGGGAGTGGAGGAGCGAGAGGCACTGGCAAGGATGGCAGCTAACGTGGAAAACCCAGCATCTGCTGACTCCGAGGCCTATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 90 bp TGGACACAAATCCTCTTGCGTAGGACCAGCTGCATGTCGGCAGGATaGCTGAGCTGGACAGTCACTCGCAGGATGAGGAACACTCGCTCG +
Preference number: 5 (lower is better)
Translates to: WTQILLRRTSCMSAG*LSWTVTRRMRNTRS
Trigger: CGAGCGAGTGTTCCTCATCCTGCGAGTGACTGTCCAGCTCAGCCATCCTGCCGACATGCAGCTGGTCCTACGCAAGAGGATTTGTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp TGTGCCAGGAAGGCCACCCATCCTCCTAGCGCTCTAAGCAGCCTCTGGTCAGGGGTCCACTACAGAGCCTaGGGATTAATCCAGGTTGGT +
Preference number: 5 (lower is better)
Translates to: CARKATHPPSALSSLWSGVHYRA*GLIQVG
Trigger: ACCAACCTGGATTAATCCCAAGGCTCTGTAGTGGAC...CCCTGACCAGAGGCTGCTTAGAGCGCTAGGAGGATGGGTGGCCTTCCTGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGGCTCTCAAGCTGCTTTaGCCGCTCCTGCGCAATCTC +
Preference number: 5 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKALKLL*PLLRNL
Trigger: GAGATTGCGCAGGAGCGGCAAAAGCAGCTTGAGAGC...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp ACAGTCAGAAGCACTGTGGGCTTCCATAGAGTGGCCAGGCAGGACTGGCACTGCGAGCCTCCTCTGTCCTaGTTGCCCAGGTATCTGAGA +
Preference number: 5 (lower is better)
Translates to: TVRSTVGFHRVARQDWHCEPPLS*LPRYLR
Trigger: TCTCAGATACCTGGGCAACAAGGACAGAGGAGGCTC...GCAGTGCCAGTCCTGCCTGGCCACTCTATGGAAGCCCACAGTGCTTCTGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS TCA 90 bp CAGGAGACAGCCTTCTTCGAAGCTGTTCCAGTTCGTGTTCGTACATaGGCCTCTGGCGCTCCAGAGCAGACCGCTTCTCCTCCTCATGCT +
Preference number: 5 (lower is better)
Translates to: QETAFFEAVPVRVRT*ASGAPEQTASPPHA
Trigger: AGCATGAGGAGGAGAAGCGGTCTGCTCTGGAGCGCCAGAGGCTCATGTACGAACACGAACTGGAACAGCTTCGAAGAAGGCTGTCTCCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 90 bp ATGAGCCTCTGGCGCTCCAGAGCAGACCGCTTCTCCTCCTCATGCTaGTGTTCTAGGCTGCTCAGTATGGACTGCATTGGGTCATTGCTG +
Preference number: 5 (lower is better)
Translates to: MSLWRSRADRFSSSC*CSRLLSMDCIGSLL
Trigger: CAGCAATGACCCAATGCAGTCCATACTGAGCAGCCTAGAACAGCAGCATGAGGAGGAGAAGCGGTCTGCTCTGGAGCGCCAGAGGCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 90 bp GTCAGCAGATGCTGGGTTTTCCACGTTAGCTGCCATCCTTGCCAGTaGCTCTCGCTCCTCCACTCCCTGGGCATCCTCTGGAATATTGGA +
Preference number: 5 (lower is better)
Translates to: VSRCWVFHVSCHPCQ*LSLLHSLGILWNIG
Trigger: TCCAATATTCCAGAGGATGCCCAGGGAGTGGAGGAGCGAGAGGCACTGGCAAGGATGGCAGCTAACGTGGAAAACCCAGCATCTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 90 bp TGGCATCTGTGGCACCAGGGACTTCACTGGGTTCAAGTAAGAGGCTaGCACGCCTCCCAGTCCAGGATCAGGAGACTGGTTATTTTGGGG +
Preference number: 5 (lower is better)
Translates to: WHLWHQGLHWVQVRG*HASQSRIRRLVILG
Trigger: CCCCAAAATAACCAGTCTCCTGATCCTGGACTGGGAGGCGTGGCAGCCTCTTACTTGAACCCAGTGAAGTCCCTGGTGCCACAGATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 90 bp GTCATCCCGAACAGGGAAGAGAGACTTCAGCAGCTTTGGCATCTGTaGCACCAGGGACTTCACTGGGTTCAAGTAAGAGGCTGCCACGCC +
Preference number: 5 (lower is better)
Translates to: VIPNREERLQQLWHL*HQGLHWVQVRGCHA
Trigger: GGCGTGGCAGCCTCTTACTTGAACCCAGTGAAGTCCCTGGTGCCACAGATGCCAAAGCTGCTGAAGTCTCTCTTCCCTGTTCGGGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGCATAAGCAAAGATCTTaGGCTGGCCCCGGGCATCTC +
Preference number: 5 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKHKQRS*AGPGHL
Trigger: GAGATGCCCGGGGCCAGCCAAAGATCTTTGCTTATG...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCACTCCTTGTTTTTGCTaGGATGATCCCCAAGTCCCA +
Preference number: 5 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGTPCFC*DDPQVP
Trigger: TGGGACTTGGGGATCATCCAAGCAAAAACAAGGAGT...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCCCCAGGGCTGCCTTGTaGAGCCTCCTCTGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSPRAAL*SLLCPC
Trigger: ACAAGGACAGAGGAGGCTCAACAAGGCAGCCCTGGG...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS GCA 90 bp CGCTTCTCCTCCTCATGCTGCTGTTCTAGGCTGCTCAGTATGGACTaGATTGGGTCATTGCTGCCCAGAGCCTTCATGGTCACCTCCATC +
Preference number: 5 (lower is better)
Translates to: RFSSSCCCSRLLSMD*IGSLLPRAFMVTSI
Trigger: GATGGAGGTGACCATGAAGGCTCTGGGCAGCAATGACCCAATGCAGTCCATACTGAGCAGCCTAGAACAGCAGCATGAGGAGGAGAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 90 bp TACATGAGCCTCTGGCGCTCCAGAGCAGACCGCTTCTCCTCCTCATaGTGCTGTTCTAGGCTGCTCAGTATGGACTGCATTGGGTCATTG +
Preference number: 5 (lower is better)
Translates to: YMSLWRSRADRFSSS*CCSRLLSMDCIGSL
Trigger: CAATGACCCAATGCAGTCCATACTGAGCAGCCTAGAACAGCAGCATGAGGAGGAGAAGCGGTCTGCTCTGGAGCGCCAGAGGCTCATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 90 bp AGCCTTCTTCGAAGCTGTTCCAGTTCGTGTTCGTACATGAGCCTCTaGCGCTCCAGAGCAGACCGCTTCTCCTCCTCATGCTGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: SLLRSCSSSCSYMSL*RSRADRFSSSCCCS
Trigger: AGAACAGCAGCATGAGGAGGAGAAGCGGTCTGCTCTGGAGCGCCAGAGGCTCATGTACGAACACGAACTGGAACAGCTTCGAAGAAGGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 90 bp CACTGCAGTGATCGAACACAACCATACACTGTGGCTGCTTGCTGGTaGGAGACGAAGACGTATCCACTTCAGGGGCAACGGTCACTGGCT +
Preference number: 5 (lower is better)
Translates to: HCSDRTQPYTVAACW*ETKTYPLQGQRSLA
Trigger: AGCCAGTGACCGTTGCCCCTGAAGTGGATACGTCTTCGTCTCCCACCAGCAAGCAGCCACAGTGTATGGTTGTGTTCGATCACTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGTGACAAGTGGAGTGACATTCATTGCCTCTGCCTaGGTCAGCTGCTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: NGTEAGLSWQIVVTSGVTFIASA*VSCSRS
Trigger: GCTCCGGGAGCAGCTGACCAAGGCAGAGGCAATGAA...TGTCACTCCACTTGTCACCACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp CCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCTTAACCAGGAAGCACTaGTCATCCCCAACCTTGATT +
Preference number: 5 (lower is better)
Translates to: PKVTSLPSKQTGTQGPLGLTRKH*SSPTLI
Trigger: AATCAAGGTTGGGGATGACAAGTGCTTCCTGGTTAA...GCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS TCA 90 bp AGCATGGTTGACGATGTGCTTTGCTCGATCTGCGTACCTCAGGGTTaGGAGGGTTTCGTCATAGTTATCTGCAGCGGGGCTCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: SMVDDVLCSICVPQG*EGFVIVICSGAHSG
Trigger: GCCACTGTGAGCCCCGCTGCAGATAACTATGACGAAACCCTCTCAACCCTGAGGTACGCAGATCGAGCAAAGCACATCGTCAACCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 90 bp CAGGGGCAACGGTCACTGGCTCCTGCTGATCCCAGAAGTCATATTTaGAGAAGACAAAGTGACACAGATGCTGCGGCAACCCTGTGGCTT +
Preference number: 5 (lower is better)
Translates to: QGQRSLAPADPRSHI*RRQSDTDAAATLWL
Trigger: AAGCCACAGGGTTGCCGCAGCATCTGTGTCACTTTGTCTTCTGCAAATATGACTTCTGGGATCAGCAGGAGCCAGTGACCGTTGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 90 bp ACTCACTGCAGTGATCGAACACAACCATACACTGTGGCTGCTTGCTaGTGGGAGACGAAGACGTATCCACTTCAGGGGCAACGGTCACTG +
Preference number: 5 (lower is better)
Translates to: THCSDRTQPYTVAAC*WETKTYPLQGQRSL
Trigger: CAGTGACCGTTGCCCCTGAAGTGGATACGTCTTCGTCTCCCACCAGCAAGCAGCCACAGTGTATGGTTGTGTTCGATCACTGCAGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 90 bp ACGTTAGCTGCCATCCTTGCCAGTGCCTCTCGCTCCTCCACTCCCTaGGCATCCTCTGGAATATTGGAGACGATTTCAAAGGTCACTCCA +
Preference number: 5 (lower is better)
Translates to: TLAAILASASRSSTP*ASSGILETISKVTP
Trigger: TGGAGTGACCTTTGAAATCGTCTCCAATATTCCAGAGGATGCCCAGGGAGTGGAGGAGCGAGAGGCACTGGCAAGGATGGCAGCTAACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AGCTGGCAGCTCCAGAAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCTTTCTCGTCGGTTCATaGGCCGGACCCGTACCGCCA +
Preference number: 5 (lower is better)
Translates to: SWQLQKSVLFKNGTEAGLFLVGS*AGPVPP
Trigger: TGGCGGTACGGGTCCGGCCAATGAACCGACGAGAAA...GAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCTGCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAGCACCTGAGCCCCATCTCTTCGGACCCACCCGAAAGTGCCAGCTTTCCCAAGCAAATCTGCTTTCCTTaGCCCTTTCTTCTCACCTGG +
Preference number: 5 (lower is better)
Translates to: KHLSPISSDPPESASFPKQICFP*PFLLTW
Trigger: CCAGGTGAGAAGAAAGGGCAAAGGAAAGCAGATTTG...CTTGGGAAAGCTGGCACTTTCGGGTGGGTCCGAAGAGATGGGGCTCAGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp CCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCCACAGGAACAACTCATAAGCTCCAGCTCTGTGCTTaGAGTAGGAGCTGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: PQSRQEHRVLSATGTTHKLQLCA*SRSCRY
Trigger: GTACCTGCAGCTCCTACTCAAAGCACAGAGCTGGAG...CTTATGAGTTGTTCCTGTGGCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS TCA 90 bp ATCAGTGGTAAAGTTCCTGACTCCTGCACAGACTTCACTTCAACTTaGACTCGCCGAGACTGCCCCTGTCGGAGCTGGAAGATCCCTCCT +
Preference number: 5 (lower is better)
Translates to: ISGKVPDSCTDFTST*TRRDCPCRSWKIPP
Trigger: AGGAGGGATCTTCCAGCTCCGACAGGGGCAGTCTCGGCGAGTTCAAGTTGAAGTGAAGTCTGTGCAGGAGTCAGGAACTTTACCACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 90 bp CACACTCCTCAAGTACTTCTCAATATAGGCCTCGGAGTCAGCAGATaGTGGGTTTTCCACGTTAGCTGCCATCCTTGCCAGTGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: HTPQVLLNIGLGVSR*WVFHVSCHPCQCLS
Trigger: CGAGAGGCACTGGCAAGGATGGCAGCTAACGTGGAAAACCCAGCATCTGCTGACTCCGAGGCCTATATTGAGAAGTACTTGAGGAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 90 bp ACTCCTCAAGTACTTCTCAATATAGGCCTCGGAGTCAGCAGATGCTaGGTTTTCCACGTTAGCTGCCATCCTTGCCAGTGCCTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: TPQVLLNIGLGVSRC*VFHVSCHPCQCLSL
Trigger: GAGCGAGAGGCACTGGCAAGGATGGCAGCTAACGTGGAAAACCCAGCATCTGCTGACTCCGAGGCCTATATTGAGAAGTACTTGAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp CACCCGAAAGTGCCAGCTTTCCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGCCCCGGGCATCTCCTTaGGAAAGATTTGTATTTACA +
Preference number: 5 (lower is better)
Translates to: HPKVPAFPRSPPCPQSRQPRASP*ERFVFT
Trigger: TGTAAATACAAATCTTTCCAAAGGAGATGCCCGGGG...CTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGGAAAGCTGGCACTTTCGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp CACCCGAAAGTGCCAGCTTTCCCAAGGTCACCTCCCTGCCCTCAAAGCAGACAGAGTCTGAAGAAATGGTaGTTTCCCCACAGTATCCTG +
Preference number: 5 (lower is better)
Translates to: HPKVPAFPRSPPCPQSRQSLKKW*FPHSIL
Trigger: CAGGATACTGTGGGGAAACAACCATTTCTTCAGACT...CTGTCTGCTTTGAGGGCAGGGAGGTGACCTTGGGAAAGCTGGCACTTTCGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp ATAGAGGCTGCAGCTCTGGCCAGCCAGAGGCCAGAAAGCACAGGCAGGCATGTTTACTCAAAGTTGAAGTaGATCTCGCTGGACACCTCA +
Preference number: 5 (lower is better)
Translates to: IEAAALASQRPESTGRHVYSKLK*ISLDTS
Trigger: TGAGGTGTCCAGCGAGATCAACTTCAACTTTGAGTA...AACATGCCTGCCTGTGCTTTCTGGCCTCTGGCTGGCCAGAGCTGCAGCCTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCAGGCAGGAGGATGGCTTaGTGTGCAGGAGAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: KDPIHIEHQVHESRAFCAGRRMA*CAGEES
Trigger: GCTTTCCTCTCCTGCACACAAAGCCATCCTCCTGCC...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS CCA 90 bp ATTGGCCACACCGATGAGACTATGGTTTTCCTGCTCATCATAGAATaGGTCAGCACGCTTGAAGTAGGACCGGCTAACCGGGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: IGHTDETMVFLLIIE*VSTLEVGPANRAVF
Trigger: GAAGACAGCCCGGTTAGCCGGTCCTACTTCAAGCGTGCTGACCCATTCTATGATGAGCAGGAAAACCATAGTCTCATCGGTGTGGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 90 bp CCTGTGGCTTGGAGTATTTTAACCATGCAGACCAGCCTGTTCTCCTaGGCTTCCTTTTCAGAGCTGACCTCTGTAGGATCGTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PVAWSILTMQTSLFS*ASFSELTSVGSSPP
Trigger: AGGAGGAGACGATCCTACAGAGGTCAGCTCTGAAAAGGAAGCCCAGGAGAACAGGCTGGTCTGCATGGTTAAAATACTCCAAGCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 90 bp GTTAACACTGAACTCACTGCAGTGATCGAACACAACCATACACTGTaGCTGCTTGCTGGTGGGAGACGAAGACGTATCCACTTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: VNTELTAVIEHNHTL*LLAGGRRRRIHFRG
Trigger: GCCCCTGAAGTGGATACGTCTTCGTCTCCCACCAGCAAGCAGCCACAGTGTATGGTTGTGTTCGATCACTGCAGTGAGTTCAGTGTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp TGTGCCAGGAAGGCCACCCATCCTCCTAGCGCTCTAAGCAGCCTCTGGTCAGGGACATCCACCACACATTaGGTATGTAAGTCAATTTCT +
Preference number: 5 (lower is better)
Translates to: CARKATHPPSALSSLWSGTSTTH*VCKSIS
Trigger: AGAAATTGACTTACATACCAAATGTGTGGTGGATGT...CCCTGACCAGAGGCTGCTTAGAGCGCTAGGAGGATGGGTGGCCTTCCTGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCCTTTCCTCGTTCATGTaGGTTGCAGCAACTGTCCGA +
Preference number: 5 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSLSSFM*VAATVR
Trigger: TCGGACAGTTGCTGCAACCAACATGAACGAGGAAAG...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAACACCCTCCAGCCACTGGAGGACCCATGTGCTTTGGCCAGTTGCCTGTGAAGGAGACAGAAGACCCATaGACAAATGTTCTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: KHPPATGGPMCFGQLPVKETEDP*TNVLVF
Trigger: GAACACCAGAACATTTGTCAATGGGTCTTCTGTCTC...CTTCACAGGCAACTGGCCAAAGCACATGGGTCCTCCAGTGGCTGGAGGGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCATCCCGAACCAGCAGGTaGGCCTTTACAATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: KDPIHIEHQVHESRAFCASRTSR*AFTICS
Trigger: GGAGCAGATTGTAAAGGCCAACCTGCTGGTTCGGGA...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AGCTGGCAGCTCCAGAAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCCTTTTTGAGGAGACTTaGAGCAAAGCCCTGGCGCCC +
Preference number: 5 (lower is better)
Translates to: SWQLQKSVLFKNGTEAGLLFEET*SKALAP
Trigger: GGGCGCCAGGGCTTTGCTCAAAGTCTCCTCAAAAAG...GAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCTGCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp TCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATTTCTTATCCCACCGGCCCTTGTaGCTGCCTAGACTGTGGGAT +
Preference number: 5 (lower is better)
Translates to: SCKALWKWYYFQRQGDFLSHRPL*LPRLWD
Trigger: ATCCCACAGTCTAGGCAGCAACAAGGGCCGGTGGGA...TAAGAAATCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCATTGGGACACATCCTGTaGACTTTCCCACCGGCCCTT +
Preference number: 5 (lower is better)
Translates to: KDPIHIEHQVHESRAFCALGHIL*TFPPAL
Trigger: AAGGGCCGGTGGGAAAGTCAACAGGATGTGTCCCAA...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCACCTCCTCTGTCCTTGTaGCCCAGGTATCTGAGAAGG +
Preference number: 5 (lower is better)
Translates to: KDPIHIEHQVHESRAFCAPPLSL*PRYLRR
Trigger: CCTTCTCAGATACCTGGGCAACAAGGACAGAGGAGG...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS GCA 90 bp CATTGGGTCATTGCTGCCCAGAGCCTTCATGGTCACCTCCATCTGTaGATACTCAAAGTTGAAGTTGATCTCGCTGGACACCTCACTGGA +
Preference number: 5 (lower is better)
Translates to: HWVIAAQSLHGHLHL*ILKVEVDLAGHLTG
Trigger: TCCAGTGAGGTGTCCAGCGAGATCAACTTCAACTTTGAGTATGCACAGATGGAGGTGACCATGAAGGCTCTGGGCAGCAATGACCCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCAACTGTCCGAGACTTGTaGCCCTCAGACATCAGAGAC +
Preference number: 5 (lower is better)
Translates to: KDPIHIEHQVHESRAFCATVRDL*PSDIRD
Trigger: GTCTCTGATGTCTGAGGGCAACAAGTCTCGGACAGT...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCACTGCGTACCTCAGGGTaGAGAGGGTTTCGTCATAGT +
Preference number: 5 (lower is better)
Translates to: KDPIHIEHQVHESRAFCALRTSG*RGFRHS
Trigger: ACTATGACGAAACCCTCTCAACCCTGAGGTACGCAG...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AGCTGGCAGCTCCAGAAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCTCAGTATGGACTGCATaGGGTCATTGCTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: SWQLQKSVLFKNGTEAGLSVWTA*GHCCPE
Trigger: CTCTGGGCAGCAATGACCCAATGCAGTCCATACTGA...GAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCTGCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGGTGACAAGTGGAGTGACACGGCAACCCTGTGGCTaGGAGTATTTTAACCATGCA +
Preference number: 5 (lower is better)
Translates to: NGTEAGLSWQIVVTSGVTRQPCG*EYFNHA
Trigger: TGCATGGTTAAAATACTCCAAGCCACAGGGTTGCCG...TGTCACTCCACTTGTCACCACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS CCA 90 bp TTTCCTGCAGGCAGATCCAGCTCCACACCAATCCATGTTCCCTCCTaGAAATCAGTTGGTCCAATATACCGTACAATGCCCGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: FPAGRSSSTPIHVPS*KSVGPIYRTMPVLL
Trigger: CAACAAGACGGGCATTGTACGGTATATTGGACCAACTGATTTCCAGGAGGGAACATGGATTGGTGTGGAGCTGGATCTGCCTGCAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp CCTCAAAGCAGACAGGAACACAGGGTCCTCTCGGCCACAGGAACAACTCATAAGAGCTGTTATTCAATGTaGCTTCTCTCTCTTCAGCCC +
Preference number: 5 (lower is better)
Translates to: PQSRQEHRVLSATGTTHKSCYSM*LLSLQP
Trigger: GGGCTGAAGAGAGAGAAGCAACATTGAATAACAGCT...CTTATGAGTTGTTCCTGTGGCCGAGAGGACCCTGTGTTCCTGTCTGCTTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAGAGTATCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGAAGACTTCACTTCAACTaGAACTCGCCGAGACTGCCC +
Preference number: 5 (lower is better)
Translates to: KSILQGSVEMVLLSEAGGRLHFN*NSPRLP
Trigger: GGGCAGTCTCGGCGAGTTCAAGTTGAAGTGAAGTCT...TCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGATACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS TCA 90 bp TCACGTCATAAAACAGGGTCTCCAGGAAGACATTGGCCACACCGATaGGACTATGGTTTTCCTGCTCATCATAGAATGGGTCAGCACGCT +
Preference number: 5 (lower is better)
Translates to: SRHKTGSPGRHWPHR*DYGFPAHHRMGQHA
Trigger: AGCGTGCTGACCCATTCTATGATGAGCAGGAAAACCATAGTCTCATCGGTGTGGCCAATGTCTTCCTGGAGACCCTGTTTTATGACGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 90 bp TTTTCCAAAGACCAAATCTGCTTTCCTTTGCCCTTTCTTCTCACCTaGATGGCAGGTTCACTGAGGAGAGAGCCTCGCTTCCTATTGGCA +
Preference number: 5 (lower is better)
Translates to: FSKDQICFPLPFLLT*MAGSLRREPRFLLA
Trigger: TGCCAATAGGAAGCGAGGCTCTCTCCTCAGTGAACCTGCCATCCAGGTGAGAAGAAAGGGCAAAGGAAAGCAGATTTGGTCTTTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAGAGTATCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGATCCACTAAGCTCAGCTaGCCCACTTTCTCTCCAGAT +
Preference number: 5 (lower is better)
Translates to: KSILQGSVEMVLLSEAGGSTKLS*PTFSPD
Trigger: ATCTGGAGAGAAAGTGGGCAAGCTGAGCTTAGTGGA...TCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGATACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp GGTCAGAGTGCAATATGTGCTCAGCAAACCCAGAAGACCAGCAAGCACCTGAGCGACACTTTGACAGGTTaGTCACAGATCTTTACTGCA +
Preference number: 5 (lower is better)
Translates to: GQSAICAQQTQKTSKHLSDTLTG*SQIFTA
Trigger: TGCAGTAAAGATCTGTGACAAACCTGTCAAAGTGTC...GCTCAGGTGCTTGCTGGTCTTCTGGGTTTGCTGAGCACATATTGCACTCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AGCTGGCAGCTCCAGAAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCGCATCCTCTGGAATATaGGAGACGATTTCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: SWQLQKSVLFKNGTEAGLASSGI*ETISKV
Trigger: GACCTTTGAAATCGTCTCCAATATTCCAGAGGATGC...GAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTTCTGGAGCTGCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAATCTGTGCTATTCAAGAATGGAACAGAGGCAGGTCTCTCCTGGCAGATTGTGAGGAGACTGGTTATTTaGGGGCGAAACAGAGAGAGC +
Preference number: 5 (lower is better)
Translates to: KSVLFKNGTEAGLSWQIVRRLVI*GRNRES
Trigger: GCTCTCTCTGTTTCGCCCCAAAATAACCAGTCTCCT...CACAATCTGCCAGGAGAGACCTGCCTCTGTTCCATTCTTGAATAGCACAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS CCA 90 bp TCCTCAGTTTTCCTTAGTTTCTCCTCCCAGGTCACAGTCATTTCCTaGATGAGTTTCTCCGATTCTTCCAGACGATCTTTCAGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: SSVFLSFSSQVTVIS*MSFSDSSRRSFSSG
Trigger: TCCAGAGCTGAAAGATCGTCTGGAAGAATCGGAGAAACTCATCCAGGAAATGACTGTGACCTGGGAGGAGAAACTAAGGAAAACTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCACGTTTGGTTAATGCATaGAGCCATTTTCTACGAAGC +
Preference number: 5 (lower is better)
Translates to: KDPIHIEHQVHESRAFCARLVNA*SHFLRS
Trigger: GCTTCGTAGAAAATGGCTCAATGCATTAACCAAACG...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAAGATCCCATCCACATTGAGCACCAAGTGCATGAGAGCAGAGCCTTCTGTGCAGCATCATCCTCAGTTTaGTCATGTTTACTGACAAGC +
Preference number: 5 (lower is better)
Translates to: KDPIHIEHQVHESRAFCAASSSV*SCLLTS
Trigger: GCTTGTCAGTAAACATGACAAAACTGAGGATGATGC...TGCACAGAAGGCTCTGCTCTCATGCACTTGGTGCTCAATGTGGATGGGATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS TCA 90 bp CAGTTTTCCTTAGTTTCTCCTCCCAGGTCACAGTCATTTCCTGGATaGGTTTCTCCGATTCTTCCAGACGATCTTTCAGCTCTGGAGATT +
Preference number: 5 (lower is better)
Translates to: QFSLVSPPRSQSFPG*VSPILPDDLSALEI
Trigger: AATCTCCAGAGCTGAAAGATCGTCTGGAAGAATCGGAGAAACTCATCCAGGAAATGACTGTGACCTGGGAGGAGAAACTAAGGAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS-3UTR CAA 90 bp AAGAGTATCCTGCAAGGCTCTGTGGAAATGGTATTACTTTCAGAGGCAGGGGGAGACAAGCTTCTGCAGTaGTTGATCCAAGTATTCTTG +
Preference number: 5 (lower is better)
Translates to: KSILQGSVEMVLLSEAGGDKLLQ*LIQVFL
Trigger: CAAGAATACTTGGATCAACAACTGCAGAAGCTTGTC...TCCCCCTGCCTCTGAAAGTAATACCATTTCCACAGAGCCTTGCAGGATACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS TCA 90 bp GTCAGGGTAGCATCCCATCCTGCTTCTGGGTCATCGAGATTATCCTaGGAGCTGAAATCATCCGCATTTAAGTCAAGAAATATAACAGGA +
Preference number: 5 (lower is better)
Translates to: VRVASHPASGSSRLS*ELKSSAFKSRNITG
Trigger: TCCTGTTATATTTCTTGACTTAAATGCGGATGATTTCAGCTCTCAGGATAATCTCGATGACCCAGAAGCAGGATGGGATGCTACCCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 90 bp TCTGCAGTTGTTGATCCAAGTATTCTTGACGTTTGGTTAATGCATTaGGCCATTTTCTACGAAGCCGCTCTAAATCCCTATCCTGGTAGC +
Preference number: 5 (lower is better)
Translates to: SAVVDPSILDVWLMH*AIFYEAALNPYPGS
Trigger: GCTACCAGGATAGGGATTTAGAGCGGCTTCGTAGAAAATGGCTCAATGCATTAACCAAACGTCAAGAATACTTGGATCAACAACTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 90 bp AATCTGGAGGGTAACTTTATACTCGGTTCTTTTATCCAACTCTTCTaGGATGTAACTAGCTTCCCGAACCAGCAGGTTGGCCTTTACAAT +
Preference number: 5 (lower is better)
Translates to: NLEGNFILGSFIQLF*DVTSFPNQQVGLYN
Trigger: ATTGTAAAGGCCAACCTGCTGGTTCGGGAAGCTAGTTACATCGCAGAAGAGTTGGATAAAAGAACCGAGTATAAAGTTACCCTCCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp CTGGGGCTCCCTGAGGCTGGAGCCCTGAACTGCGCCTaGGCCCAGTGCCCACAGCCCTGCGGACCCGGCTGG +
Preference number: 6 (lower is better)
Translates to: LGLPEAGALNCA*AQCPQPCGPGW
Trigger: CCAGCCGGGTCCGCAGGGCTGTGGGCACTGGGCGCAGGCGCAGTTCAGGGCTCCAGCCTCAGGGAGCCCCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 72 bp GAGATGGTAGCACTTCTGCGGACCTCTGGGGCTCCCTaGGGCTGGAGCCCTGAACTGCGCCTGCGCCCAGTG +
Preference number: 6 (lower is better)
Translates to: EMVALLRTSGAP*GWSPELRLRPV
Trigger: CACTGGGCGCAGGCGCAGTTCAGGGCTCCAGCCTCAGGGAGCCCCAGAGGTCCGCAGAAGTGCTACCATCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp GCCCACTGTTTCAAGCGCTGCTGGGCACTGGGCGAGTaGAAGGAGAGCCGGTCCACACCGCGGCAGTTCTGC +
Preference number: 6 (lower is better)
Translates to: AHCFKRCWALGE*KESRSTPRQFC
Trigger: GCAGAACTGCCGCGGTGTGGACCGGCTCTCCTTCCACTCGCCCAGTGCCCAGCAGCGCTTGAAACAGTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp GCTGCAGGTACGTGGGCCTCCTCTGGGGCAGGAGGATaGCTTTGTGTGCAGGAGAGGAAAGCCAGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: AAGTWASSGAGG*LCVQERKASSG
Trigger: GCCTGAGCTGGCTTTCCTCTCCTGCACACAAAGCCATCCTCCTGCCCCAGAGGAGGCCCACGTACCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp ACAACCTGGCCCTCGGGCGTGATGTCTATGATGCCGTaGTCAGGGAGGATGCCCATCCCGCAGAGCTGGATG +
Preference number: 6 (lower is better)
Translates to: TTWPSGVMSMMP*SGRMPIPQSWM
Trigger: CATCCAGCTCTGCGGGATGGGCATCCTCCCTGAGCACGGCATCATAGACATCACGCCCGAGGGCCAGGTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp TCCCCAATAGCCCCACTGAGTCGCATCACCTCCACGTaGAGCCGGCCTGCCACCTCTCCCTTCTGGTTGATG +
Preference number: 6 (lower is better)
Translates to: SPIAPLSRITST*SRPATSPFWLM
Trigger: CATCAACCAGAAGGGAGAGGTGGCAGGCCGGCTGCACGTGGAGGTGATGCGACTCAGTGGGGCTATTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp GAGTGGAAGGAGAGCCGGTCCACACCGCGGCAGTTCTaGCTCTCAGGAGACAGCCTTCTTCGAAGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: EWKESRSTPRQF*LSGDSLLRSCS
Trigger: GGAACAGCTTCGAAGAAGGCTGTCTCCTGAGAGGCAGAACTGCCGCGGTGTGGACCGGCTCTCCTTCCACTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp TGCTGGGTTTTCCACGTTAGCTGCCATCCTTGCCAGTaGCTCTCGCTCCTCCACTCCCTGGGCATCCTCTGG +
Preference number: 6 (lower is better)
Translates to: CWVFHVSCHPCQ*LSLLHSLGILW
Trigger: CCAGAGGATGCCCAGGGAGTGGAGGAGCGAGAGGCACTGGCAAGGATGGCAGCTAACGTGGAAAACCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp GATCTTTACTGCAGGGGCCGCCATCACCTCTGCAAGTaGGGCAGCCCCAACCTGGTGACTCACCTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: DLYCRGRHHLCK*GSPNLVTHLLC
Trigger: ACAGAGGAGGTGAGTCACCAGGTTGGGGCTGCCCCACTTGCAGAGGTGATGGCGGCCCCTGCAGTAAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100473.5
CDS GCA 72 bp AGGTGTGCCCTTACTGAGTTGAGGACAGCTGTGCACTaGAGAGTCCCAGGAGGCCTCTGCCTTCACCTCTCC +
Preference number: 6 (lower is better)
Translates to: RCALTELRTAVH*RVPGGLCLHLS
Trigger: GGAGAGGTGAAGGCAGAGGCCTCCTGGGACTCTGCAGTGCACAGCTGTCCTCAACTCAGTAAGGGCACACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp CTCGGAGTCAGCAGATGCTGGGTTTTCCACGTTAGCTaGCATCCTTGCCAGTGCCTCTCGCTCCTCCACTCC +
Preference number: 6 (lower is better)
Translates to: LGVSRCWVFHVS*HPCQCLSLLHS
Trigger: GGAGTGGAGGAGCGAGAGGCACTGGCAAGGATGGCAGCTAACGTGGAAAACCCAGCATCTGCTGACTCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp GAGGCTGCCACGCCTCCCAGTCCAGGATCAGGAGACTaGTTATTTTGGGGCGAAACAGAGAGAGCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: EAATPPSPGSGD*LFWGETERAGG
Trigger: CCCTCCAGCTCTCTCTGTTTCGCCCCAAAATAACCAGTCTCCTGATCCTGGACTGGGAGGCGTGGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp CAGCAGCTTTGGCATCTGTGGCACCAGGGACTTCACTaGGTTCAAGTAAGAGGCTGCCACGCCTCCCAGTCC +
Preference number: 6 (lower is better)
Translates to: QQLWHLWHQGLH*VQVRGCHASQS
Trigger: GGACTGGGAGGCGTGGCAGCCTCTTACTTGAACCCAGTGAAGTCCCTGGTGCCACAGATGCCAAAGCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp GCTTTGAGTAGGAGCTGCAGGTACGTGGGCCTCCTCTaGGGCAGGAGGATGGCTTTGTGTGCAGGAGAGGAA +
Preference number: 6 (lower is better)
Translates to: ALSRSCRYVGLL*GRRMALCAGEE
Trigger: TTCCTCTCCTGCACACAAAGCCATCCTCCTGCCCCAGAGGAGGCCCACGTACCTGCAGCTCCTACTCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 90 bp AGAGGCTGCCACGCCTCCCAGTCCAGGATCAGGAGACTGGTTATTTaGGGGCGAAACAGAGAGAGCTGGAGGGCCTGGAGCTATTCCTCT +
Preference number: 6 (lower is better)
Translates to: RGCHASQSRIRRLVI*GRNRESWRAWSYSS
Trigger: AGAGGAATAGCTCCAGGCCCTCCAGCTCTCTCTGTTTCGCCCCAAAATAACCAGTCTCCTGATCCTGGACTGGGAGGCGTGGCAGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 72 bp TCAGGGAGGATGCCCATCCCGCAGAGCTGGATGTCCTaGGAATTGGCCGACCCTATCAGCGTGTGCTCCTTT +
Preference number: 6 (lower is better)
Translates to: SGRMPIPQSWMS*ELADPISVCSF
Trigger: AAAGGAGCACACGCTGATAGGGTCGGCCAATTCTCAGGACATCCAGCTCTGCGGGATGGGCATCCTCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 72 bp AAAGGGCTGGGTGGTCCATCCTGTCCTTCTGGGGGCTaGGTAACCACCATGGGAGATGGAGGGGAAGACACT +
Preference number: 6 (lower is better)
Translates to: KGLGGPSCPSGG*VTTMGDGGEDT
Trigger: AGTGTCTTCCCCTCCATCTCCCATGGTGGTTACTCAGCCCCCAGAAGGACAGGATGGACCACCCAGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 72 bp GATTCCAAAGCCCCACTAGGCCCAGGGCTGCCTTGTTaGGCCTCCTCTGTCCTTGTTGCCCAGGTATCTGAG +
Preference number: 6 (lower is better)
Translates to: DSKAPLGPGLPC*ASSVLVAQVSE
Trigger: CTCAGATACCTGGGCAACAAGGACAGAGGAGGCTCAACAAGGCAGCCCTGGGCCTAGTGGGGCTTTGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS GCA 72 bp TGGCACCAGGGACTTCACTGGGTTCAAGTAAGAGGCTaGCACGCCTCCCAGTCCAGGATCAGGAGACTGGTT +
Preference number: 6 (lower is better)
Translates to: WHQGLHWVQVRG*HASQSRIRRLV
Trigger: AACCAGTCTCCTGATCCTGGACTGGGAGGCGTGGCAGCCTCTTACTTGAACCCAGTGAAGTCCCTGGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp ATCCTCTTGCGTAGGACCAGCTGCATGTCGGCAGGATaGCTGAGCTGGACAGTCACTCGCAGGATGAGGAAC +
Preference number: 6 (lower is better)
Translates to: ILLRRTSCMSAG*LSWTVTRRMRN
Trigger: GTTCCTCATCCTGCGAGTGACTGTCCAGCTCAGCCATCCTGCCGACATGCAGCTGGTCCTACGCAAGAGGAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 72 bp CAGCAGAAGGCACCATCACTGCATTTCTTTCCTCTGTaGGCGTCAGCCGCATCTCCAGGAGCTGTGCCTCTC +
Preference number: 6 (lower is better)
Translates to: QQKAPSLHFFPL*ASAASPGAVPL
Trigger: GAGAGGCACAGCTCCTGGAGATGCGGCTGACGCTCACAGAGGAAAGAAATGCAGTGATGGTGCCTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 72 bp TTGTTGAGCCTCCTCTGTCCTTGTTGCCCAGGTATCTaGGAAGGTAGGCTGCACCAAGATTCGGGGCACGGG +
Preference number: 6 (lower is better)
Translates to: LLSLLCPCCPGI*EGRLHQDSGHG
Trigger: CCCGTGCCCCGAATCTTGGTGCAGCCTACCTTCTCAGATACCTGGGCAACAAGGACAGAGGAGGCTCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS GCA 72 bp TGTCGCCCGCAGCTCCGGTTTTCGTGGCTCGTTCACTaGCAGCTAAATCCACTAAGCTCAGCTTGCCCACTT +
Preference number: 6 (lower is better)
Translates to: CRPQLRFSWLVH*QLNPLSSACPL
Trigger: AAGTGGGCAAGCTGAGCTTAGTGGATTTAGCTGGCAGTGAACGAGCCACGAAAACCGGAGCTGCGGGCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp GACACCTCACTGGAGGAGTCGCCGTCGGCATCCAGCTaGTCAGAACTACTGTCGTTTTTCAGGGATGCCTCA +
Preference number: 6 (lower is better)
Translates to: DTSLEESPSASS*SELLSFFRDAS
Trigger: TGAGGCATCCCTGAAAAACGACAGTAGTTCTGAGCAGCTGGATGCCGACGGCGACTCCTCCAGTGAGGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp CCCTGGAATGCCACTCCCAGCAGAAGGCACCATCACTaGATTTCTTTCCTCTGTGAGCGTCAGCCGCATCTC +
Preference number: 6 (lower is better)
Translates to: PWNATPSRRHHH*ISFLCERQPHL
Trigger: GAGATGCGGCTGACGCTCACAGAGGAAAGAAATGCAGTGATGGTGCCTTCTGCTGGGAGTGGCATTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp TTGTTGCTGCCTAGACTGTGGGATGGGCTAAGCTCCTaGCGGCTTCCTGACAATCTGTTCATGCTGGGGGAG +
Preference number: 6 (lower is better)
Translates to: LLLPRLWDGLSS*RLPDNLFMLGE
Trigger: CTCCCCCAGCATGAACAGATTGTCAGGAAGCCGGCAGGAGCTTAGCCCATCCCACAGTCTAGGCAGCAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp CGTGGGTACAGCAGACGCGGGTTCAGAAAGAAGAGGTaGTCTGGGAACCTCCAGCTCTGTGCTTTGAGTAGG +
Preference number: 6 (lower is better)
Translates to: RGYSRRGFRKKR*SGNLQLCALSR
Trigger: CCTACTCAAAGCACAGAGCTGGAGGTTCCCAGAGCACCTCTTCTTTCTGAACCCGCGTCTGCTGTACCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 90 bp CTGCCCAGAGCCTTCATGGTCACCTCCATCTGTGCATACTCAAAGTaGAAGTTGATCTCGCTGGACACCTCACTGGAGGAGTCGCCGTCG +
Preference number: 6 (lower is better)
Translates to: LPRAFMVTSICAYSK*KLISLDTSLEESPS
Trigger: CGACGGCGACTCCTCCAGTGAGGTGTCCAGCGAGATCAACTTCAACTTTGAGTATGCACAGATGGAGGTGACCATGAAGGCTCTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp GGGTTTCGTCATAGTTATCTGCAGCGGGGCTCACAGTaGCCACCATGGCAGTCTTGCTATTACCTCCCAGAC +
Preference number: 6 (lower is better)
Translates to: GFRHSYLQRGSQ*PPWQSCYYLPD
Trigger: GTCTGGGAGGTAATAGCAAGACTGCCATGGTGGCCACTGTGAGCCCCGCTGCAGATAACTATGACGAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp GATCGAACACAACCATACACTGTGGCTGCTTGCTGGTaGGAGACGAAGACGTATCCACTTCAGGGGCAACGG +
Preference number: 6 (lower is better)
Translates to: DRTQPYTVAACW*ETKTYPLQGQR
Trigger: CCGTTGCCCCTGAAGTGGATACGTCTTCGTCTCCCACCAGCAAGCAGCCACAGTGTATGGTTGTGTTCGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 90 bp AGAGCCTTCATGGTCACCTCCATCTGTGCATACTCAAAGTTGAAGTaGATCTCGCTGGACACCTCACTGGAGGAGTCGCCGTCGGCATCC +
Preference number: 6 (lower is better)
Translates to: RAFMVTSICAYSKLK*ISLDTSLEESPSAS
Trigger: GGATGCCGACGGCGACTCCTCCAGTGAGGTGTCCAGCGAGATCAACTTCAACTTTGAGTATGCACAGATGGAGGTGACCATGAAGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 72 bp GACGATGTGCTTTGCTCGATCTGCGTACCTCAGGGTTaGGAGGGTTTCGTCATAGTTATCTGCAGCGGGGCT +
Preference number: 6 (lower is better)
Translates to: DDVLCSICVPQG*EGFVIVICSGA
Trigger: AGCCCCGCTGCAGATAACTATGACGAAACCCTCTCAACCCTGAGGTACGCAGATCGAGCAAAGCACATCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 72 bp CTTTGCCCTTTCTTCTCACCTGGATGGCAGGTTCACTaGGGAGAGAGCCTCGCTTCCTATTGGCATCCAGAC +
Preference number: 6 (lower is better)
Translates to: LCPFFSPGWQVH*GESLASYWHPD
Trigger: GTCTGGATGCCAATAGGAAGCGAGGCTCTCTCCTCAGTGAACCTGCCATCCAGGTGAGAAGAAAGGGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 72 bp AAAGTTCCTGACTCCTGCACAGACTTCACTTCAACTTaGACTCGCCGAGACTGCCCCTGTCGGAGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: KVPDSCTDFTST*TRRDCPCRSWK
Trigger: CTTCCAGCTCCGACAGGGGCAGTCTCGGCGAGTTCAAGTTGAAGTGAAGTCTGTGCAGGAGTCAGGAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 72 bp TGGGCCTCACCAGCAGCCCATAGCCAGGGTTGCACCTaGAATACTGTTTCCCACCAATGGAGCCATCATTCT +
Preference number: 6 (lower is better)
Translates to: WASPAAHSQGCT*NTVSHQWSHHS
Trigger: AGAATGATGGCTCCATTGGTGGGAAACAGTATTTCAGGTGCAACCCTGGCTATGGGCTGCTGGTGAGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp CTAGGCTGCTCAGTATGGACTGCATTGGGTCATTGCTaGCCAGAGCCTTCATGGTCACCTCCATCTGTGCAT +
Preference number: 6 (lower is better)
Translates to: LGCSVWTALGHC*PEPSWSPPSVH
Trigger: ATGCACAGATGGAGGTGACCATGAAGGCTCTGGGCAGCAATGACCCAATGCAGTCCATACTGAGCAGCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp GTTCTAGGCTGCTCAGTATGGACTGCATTGGGTCATTaGTGCCCAGAGCCTTCATGGTCACCTCCATCTGTG +
Preference number: 6 (lower is better)
Translates to: VLGCSVWTALGH*CPEPSWSPPSV
Trigger: CACAGATGGAGGTGACCATGAAGGCTCTGGGCAGCAATGACCCAATGCAGTCCATACTGAGCAGCCTAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp TCCTCATGCTGCTGTTCTAGGCTGCTCAGTATGGACTaGATTGGGTCATTGCTGCCCAGAGCCTTCATGGTC +
Preference number: 6 (lower is better)
Translates to: SSCCCSRLLSMD*IGSLLPRAFMV
Trigger: GACCATGAAGGCTCTGGGCAGCAATGACCCAATGCAGTCCATACTGAGCAGCCTAGAACAGCAGCATGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp TGCAGTGATCGAACACAACCATACACTGTGGCTGCTTaGTGGTGGGAGACGAAGACGTATCCACTTCAGGGG +
Preference number: 6 (lower is better)
Translates to: CSDRTQPYTVAA*WWETKTYPLQG
Trigger: CCCCTGAAGTGGATACGTCTTCGTCTCCCACCAGCAAGCAGCCACAGTGTATGGTTGTGTTCGATCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp GACTTCACTCCACCTGTCCCGAAGACTCCTTGTTTTTaGTTGGATGATCCCCAAGTCCCACAGGGCTGGGTT +
Preference number: 6 (lower is better)
Translates to: DFTPPVPKTPCF*LDDPQVPQGWV
Trigger: AACCCAGCCCTGTGGGACTTGGGGATCATCCAAGCAAAAACAAGGAGTCTTCGGGACAGGTGGAGTGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp CTCCTCCTCTTCCCCAGTCAGGGTAGCATCCCATCCTaGTTCTGGGTCATCGAGATTATCCTGAGAGCTGAA +
Preference number: 6 (lower is better)
Translates to: LLLFPSQGSIPS*FWVIEIILRAE
Trigger: TTCAGCTCTCAGGATAATCTCGATGACCCAGAAGCAGGATGGGATGCTACCCTGACTGGGGAAGAGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp TCTCCTCCTCATGCTGCTGTTCTAGGCTGCTCAGTATaGACTGCATTGGGTCATTGCTGCCCAGAGCCTTCA +
Preference number: 6 (lower is better)
Translates to: SPPHAAVLGCSV*TALGHCCPEPS
Trigger: TGAAGGCTCTGGGCAGCAATGACCCAATGCAGTCCATACTGAGCAGCCTAGAACAGCAGCATGAGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp GTCATCCCGAACAGGGAAGAGAGACTTCAGCAGCTTTaGCATCTGTGGCACCAGGGACTTCACTGGGTTCAA +
Preference number: 6 (lower is better)
Translates to: VIPNREERLQQL*HLWHQGLHWVQ
Trigger: TTGAACCCAGTGAAGTCCCTGGTGCCACAGATGCCAAAGCTGCTGAAGTCTCTCTTCCCTGTTCGGGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 72 bp ACCATGGGAGATGGAGGGGAAGACACTTTGACAGGTTaGTCACAGATCTTTACTGCAGGGGCCGCCATCACC +
Preference number: 6 (lower is better)
Translates to: TMGDGGEDTLTG*SQIFTAGAAIT
Trigger: GGTGATGGCGGCCCCTGCAGTAAAGATCTGTGACAAACCTGTCAAAGTGTCTTCCCCTCCATCTCCCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100473.5
CDS CAA 72 bp GGGTGGCAGAAGAGACACTGTGAGAGAAGTAGCCACTaGAAGCTTCACTCAAAGGGCTGGGTGGTCCATCCT +
Preference number: 6 (lower is better)
Translates to: GWQKRHCERSSH*KLHSKGWVVHP
Trigger: AGGATGGACCACCCAGCCCTTTGAGTGAAGCTTCAAGTGGCTACTTCTCTCACAGTGTCTCTTCTGCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp AGTGATCGAACACAACCATACACTGTGGCTGCTTGCTaGTGGGAGACGAAGACGTATCCACTTCAGGGGCAA +
Preference number: 6 (lower is better)
Translates to: SDRTQPYTVAAC*WETKTYPLQGQ
Trigger: TTGCCCCTGAAGTGGATACGTCTTCGTCTCCCACCAGCAAGCAGCCACAGTGTATGGTTGTGTTCGATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp GTACTTCTCAATATAGGCCTCGGAGTCAGCAGATGCTaGGTTTTCCACGTTAGCTGCCATCCTTGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: VLLNIGLGVSRC*VFHVSCHPCQC
Trigger: GCACTGGCAAGGATGGCAGCTAACGTGGAAAACCCAGCATCTGCTGACTCCGAGGCCTATATTGAGAAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp CTGTCCTTCTGGGGGCTGAGTAACCACCATGGGAGATaGAGGGGAAGACACTTTGACAGGTTTGTCACAGAT +
Preference number: 6 (lower is better)
Translates to: LSFWGLSNHHGR*RGRHFDRFVTD
Trigger: ATCTGTGACAAACCTGTCAAAGTGTCTTCCCCTCCATCTCCCATGGTGGTTACTCAGCCCCCAGAAGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 72 bp ATGGTCACCTCCATCTGTGCATACTCAAAGTTGAAGTaGATCTCGCTGGACACCTCACTGGAGGAGTCGCCG +
Preference number: 6 (lower is better)
Translates to: MVTSICAYSKLK*ISLDTSLEESP
Trigger: CGGCGACTCCTCCAGTGAGGTGTCCAGCGAGATCAACTTCAACTTTGAGTATGCACAGATGGAGGTGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 72 bp ACCATGGGAGATGGAGGGGAAGACACTTTGACAGGTTaGTCACAGATCTTTACTGCAGGGGCCGCCATCTTC +
Preference number: 6 (lower is better)
Translates to: TMGDGGEDTLTG*SQIFTAGAAIF
Trigger: GAAGATGGCGGCCCCTGCAGTAAAGATCTGTGACAAACCTGTCAAAGTGTCTTCCCCTCCATCTCCCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224503.2
CDS CAA 90 bp TTTCTGACAGGGTGGCAGAAGAGACACTGTGAGAGAAGTAGCCACTaGAAGCTTCACTCAAAGGGCTGGGTGGTCCATCCTGTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: FLTGWQKRHCERSSH*KLHSKGWVVHPVLL
Trigger: CAGAAGGACAGGATGGACCACCCAGCCCTTTGAGTGAAGCTTCAAGTGGCTACTTCTCTCACAGTGTCTCTTCTGCCACCCTGTCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 90 bp ACTGCCCCTGTCGGAGCTGGAAGATCCCTCCTGTGGGGACATCTTTaGCAGCAATTACTTCCACCGGACAGTAATCACCATTCTCATTCT +
Preference number: 6 (lower is better)
Translates to: TAPVGAGRSLLWGHL*QQLLPPDSNHHSHS
Trigger: AGAATGAGAATGGTGATTACTGTCCGGTGGAAGTAATTGCTGCAAAAGATGTCCCCACAGGAGGGATCTTCCAGCTCCGACAGGGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 90 bp TCCTGGAAATCAGTTGGTCCAATATACCGTACAATGCCCGTCTTGTaGGTGCCCACAACAACATACTCTCCCTCTCTGAGCCACTCAGGG +
Preference number: 6 (lower is better)
Translates to: SWKSVGPIYRTMPVL*VPTTTYSPSLSHSG
Trigger: CCCTGAGTGGCTCAGAGAGGGAGAGTATGTTGTTGTGGGCACCAACAAGACGGGCATTGTACGGTATATTGGACCAACTGATTTCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 90 bp CCCTCCTGGAAATCAGTTGGTCCAATATACCGTACAATGCCCGTCTaGTTGGTGCCCACAACAACATACTCTCCCTCTCTGAGCCACTCA +
Preference number: 6 (lower is better)
Translates to: PSWKSVGPIYRTMPV*LVPTTTYSPSLSHS
Trigger: TGAGTGGCTCAGAGAGGGAGAGTATGTTGTTGTGGGCACCAACAAGACGGGCATTGTACGGTATATTGGACCAACTGATTTCCAGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp CAAGTACTTCTCAATATAGGCCTCGGAGTCAGCAGATaGTGGGTTTTCCACGTTAGCTGCCATCCTTGCCAG +
Preference number: 6 (lower is better)
Translates to: QVLLNIGLGVSR*WVFHVSCHPCQ
Trigger: CTGGCAAGGATGGCAGCTAACGTGGAAAACCCAGCATCTGCTGACTCCGAGGCCTATATTGAGAAGTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp ACCGATGAGACTATGGTTTTCCTGCTCATCATAGAATaGGTCAGCACGCTTGAAGTAGGACCGGCTAACCGG +
Preference number: 6 (lower is better)
Translates to: TDETMVFLLIIE*VSTLEVGPANR
Trigger: CCGGTTAGCCGGTCCTACTTCAAGCGTGCTGACCCATTCTATGATGAGCAGGAAAACCATAGTCTCATCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp CTCTTCCCCAGTCAGGGTAGCATCCCATCCTGCTTCTaGGTCATCGAGATTATCCTGAGAGCTGAAATCATC +
Preference number: 6 (lower is better)
Translates to: LFPSQGSIPSCF*VIEIILRAEII
Trigger: GATGATTTCAGCTCTCAGGATAATCTCGATGACCCAGAAGCAGGATGGGATGCTACCCTGACTGGGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp GGCAGATCCAGCTCCACACCAATCCATGTTCCCTCCTaGAAATCAGTTGGTCCAATATACCGTACAATGCCC +
Preference number: 6 (lower is better)
Translates to: GRSSSTPIHVPS*KSVGPIYRTMP
Trigger: GGGCATTGTACGGTATATTGGACCAACTGATTTCCAGGAGGGAACATGGATTGGTGTGGAGCTGGATCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 72 bp GACAAAGTGACACAGATGCTGCGGCAACCCTGTGGCTaGGAGTATTTTAACCATGCAGACCAGCCTGTTCTC +
Preference number: 6 (lower is better)
Translates to: DKVTQMLRQPCG*EYFNHADQPVL
Trigger: GAGAACAGGCTGGTCTGCATGGTTAAAATACTCCAAGCCACAGGGTTGCCGCAGCATCTGTGTCACTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 72 bp TTCACTCCACCTGTCCCGAAGACTCCTTGTTTTTGCTaGGATGATCCCCAAGTCCCACAGGGCTGGGTTTTT +
Preference number: 6 (lower is better)
Translates to: FTPPVPKTPCFC*DDPQVPQGWVF
Trigger: AAAAACCCAGCCCTGTGGGACTTGGGGATCATCCAAGCAAAAACAAGGAGTCTTCGGGACAGGTGGAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 72 bp GTCGGAGCTGGAAGATCCCTCCTGTGGGGACATCTTTaGCAGCAATTACTTCCACCGGACAGTAATCACCAT +
Preference number: 6 (lower is better)
Translates to: VGAGRSLLWGHL*QQLLPPDSNHH
Trigger: ATGGTGATTACTGTCCGGTGGAAGTAATTGCTGCAAAAGATGTCCCCACAGGAGGGATCTTCCAGCTCCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 90 bp ACAGCCAGGAATAGAGCTCCGGTGAGACATCTTTTTGAGGAGACTTaGAGCAAAGCCCTGGCGCCCATGAACATGGACACAAATCCTCTT +
Preference number: 6 (lower is better)
Translates to: TARNRAPVRHLFEET*SKALAPMNMDTNPL
Trigger: AAGAGGATTTGTGTCCATGTTCATGGGCGCCAGGGCTTTGCTCAAAGTCTCCTCAAAAAGATGTCTCACCGGAGCTCTATTCCTGGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp ATTGCTGCCCAGAGCCTTCATGGTCACCTCCATCTGTaGATACTCAAAGTTGAAGTTGATCTCGCTGGACAC +
Preference number: 6 (lower is better)
Translates to: IAAQSLHGHLHL*ILKVEVDLAGH
Trigger: GTGTCCAGCGAGATCAACTTCAACTTTGAGTATGCACAGATGGAGGTGACCATGAAGGCTCTGGGCAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp GAGTTTCTCCGATTCTTCCAGACGATCTTTCAGCTCTaGAGATTTCATTGCCTCTGCCTTGGTCAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: EFLRFFQTIFQL*RFHCLCLGQLL
Trigger: GAGCAGCTGACCAAGGCAGAGGCAATGAAATCTCCAGAGCTGAAAGATCGTCTGGAAGAATCGGAGAAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CCA 72 bp TGGAGTATTTTAACCATGCAGACCAGCCTGTTCTCCTaGGCTTCCTTTTCAGAGCTGACCTCTGTAGGATCG +
Preference number: 6 (lower is better)
Translates to: WSILTMQTSLFS*ASFSELTSVGS
Trigger: CGATCCTACAGAGGTCAGCTCTGAAAAGGAAGCCCAGGAGAACAGGCTGGTCTGCATGGTTAAAATACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 72 bp CTTTCTGGGTTCGTTCAAAGAGTCCACTACAGAGCCTaGGGATTAATCCAGGTTGGTCAGCAGTGCCCATCA +
Preference number: 6 (lower is better)
Translates to: LSGFVQRVHYRA*GLIQVGQQCPS
Trigger: TGATGGGCACTGCTGACCAACCTGGATTAATCCCAAGGCTCTGTAGTGGACTCTTTGAACGAACCCAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100473.5
ENSMUST00000224126.2
ENSMUST00000224503.2
CDS CAA 72 bp AATAGAGCTCCGGTGAGACATCTTTTTGAGGAGACTTaGAGCAAAGCCCTGGCGCCCATGAACATGGACACA +
Preference number: 6 (lower is better)
Translates to: NRAPVRHLFEET*SKALAPMNMDT
Trigger: TGTGTCCATGTTCATGGGCGCCAGGGCTTTGCTCAAAGTCTCCTCAAAAAGATGTCTCACCGGAGCTCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 90 bp CATTTTCCTCTTTCTGGGTTCGTTCAAAGAGTCCACTACAGAGCCTaGGGATTAATCCAGGTTGGTCAGCAGTGCCCATCATGGTGTAAG +
Preference number: 6 (lower is better)
Translates to: HFPLSGFVQRVHYRA*GLIQVGQQCPSWCK
Trigger: CTTACACCATGATGGGCACTGCTGACCAACCTGGATTAATCCCAAGGCTCTGTAGTGGACTCTTTGAACGAACCCAGAAAGAGGAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100473.5
ENSMUST00000224126.2
ENSMUST00000224503.2
CDS TCA 72 bp AAAACAGGGTCTCCAGGAAGACATTGGCCACACCGATaGGACTATGGTTTTCCTGCTCATCATAGAATGGGT +
Preference number: 6 (lower is better)
Translates to: KTGSPGRHWPHR*DYGFPAHHRMG
Trigger: ACCCATTCTATGATGAGCAGGAAAACCATAGTCTCATCGGTGTGGCCAATGTCTTCCTGGAGACCCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 72 bp GTTCCAAGATCTGAACCCAGAATTCCAACTTTCTGGTaGCTTCACTCCACCTGTCCCGAAGACTCCTTGTTT +
Preference number: 6 (lower is better)
Translates to: VPRSEPRIPTFW*LHSTCPEDSLF
Trigger: AAACAAGGAGTCTTCGGGACAGGTGGAGTGAAGTCACCAGAAAGTTGGAATTCTGGGTTCAGATCTTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 72 bp TTAGTTTCTCCTCCCAGGTCACAGTCATTTCCTGGATaGGTTTCTCCGATTCTTCCAGACGATCTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: LVSPPRSQSFPG*VSPILPDDLSA
Trigger: AGCTGAAAGATCGTCTGGAAGAATCGGAGAAACTCATCCAGGAAATGACTGTGACCTGGGAGGAGAAACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS GCA 72 bp GGTAACTTTATACTCGGTTCTTTTATCCAACTCTTCTaGGATGTAACTAGCTTCCCGAACCAGCAGGTTGGC +
Preference number: 6 (lower is better)
Translates to: GNFILGSFIQLF*DVTSFPNQQVG
Trigger: GCCAACCTGCTGGTTCGGGAAGCTAGTTACATCGCAGAAGAGTTGGATAAAAGAACCGAGTATAAAGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 72 bp GACTTCACATCATACAGAGTATGTGTCAGGGTGATTTaGAAGACTGCATGGGAACGGCTACTTTCCTCGTTC +
Preference number: 6 (lower is better)
Translates to: DFTSYRVCVRVI*KTAWERLLSSF
Trigger: GAACGAGGAAAGTAGCCGTTCCCATGCAGTCTTCAAAATCACCCTGACACATACTCTGTATGATGTGAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 72 bp TTTTCCAGCTTTTCCAAAGACCAAATCTGCTTTCCTTaGCCCTTTCTTCTCACCTGGATGGCAGGTTCACTG +
Preference number: 6 (lower is better)
Translates to: FSSFSKDQICFP*PFLLTWMAGSL
Trigger: CAGTGAACCTGCCATCCAGGTGAGAAGAAAGGGCAAAGGAAAGCAGATTTGGTCTTTGGAAAAGCTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 90 bp ACAGGATTCAGAATAACTTTGTTCGCTTCAACATCCACCACACATTaGGTATGTAAGTCAATTTCTCGTCGGTTCATTGGCCGGACCCGT +
Preference number: 6 (lower is better)
Translates to: TGFRITLFASTSTTH*VCKSISRRFIGRTR
Trigger: ACGGGTCCGGCCAATGAACCGACGAGAAATTGACTTACATACCAAATGTGTGGTGGATGTTGAAGCGAACAAAGTTATTCTGAATCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 72 bp GCATCCCATCCTGCTTCTGGGTCATCGAGATTATCCTaGGAGCTGAAATCATCCGCATTTAAGTCAAGAAAT +
Preference number: 6 (lower is better)
Translates to: ASHPASGSSRLS*ELKSSAFKSRN
Trigger: ATTTCTTGACTTAAATGCGGATGATTTCAGCTCTCAGGATAATCTCGATGACCCAGAAGCAGGATGGGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS TCA 72 bp GTTGATCCAAGTATTCTTGACGTTTGGTTAATGCATTaGGCCATTTTCTACGAAGCCGCTCTAAATCCCTAT +
Preference number: 6 (lower is better)
Translates to: VDPSILDVWLMH*AIFYEAALNPY
Trigger: ATAGGGATTTAGAGCGGCTTCGTAGAAAATGGCTCAATGCATTAACCAAACGTCAAGAATACTTGGATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2
CDS CAA 72 bp AGAATAACTTTGTTCGCTTCAACATCCACCACACATTaGGTATGTAAGTCAATTTCTCGTCGGTTCATTGGC +
Preference number: 6 (lower is better)
Translates to: RITLFASTSTTH*VCKSISRRFIG
Trigger: GCCAATGAACCGACGAGAAATTGACTTACATACCAAATGTGTGGTGGATGTTGAAGCGAACAAAGTTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100473.5
ENSMUST00000224503.2