RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIDINS220 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036333

Ensembl transcript IDs: ENSMUST00000066652.7, ENSMUST00000220459.2, ENSMUST00000222013.2, ENSMUST00000222481.2, ENSMUST00000222941.2

Found 617 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGAATACACTGCCCTCCTCCAACTCCTCTGCTAACGACTCACCATaGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATC +
Preference number: 1 (lower is better)
Translates to: RNTLPSSNSSANDSP*PRPLLWALLTHLII
Trigger: GATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGTGAGTCGTTAGCAGAGGAGTTGGAGGAGGGCAGTGTATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR TCA 90 bp CTTTCCCGTCTGCTTCCCCAGTGCCTGCCACCTATCAGGTGTCTGTaGTGCATAAACACGATGAGTAATGAGGATGGGTCAACTCAAAGC +
Preference number: 1 (lower is better)
Translates to: LSRLLPQCLPPIRCL*CINTMSNEDGSTQS
Trigger: GCTTTGAGTTGACCCATCCTCATTACTCATCGTGTTTATGCATCACAGACACCTGATAGGTGGCAGGCACTGGGGAAGCAGACGGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
3UTR CCA 90 bp TCCAACTCCTCTGCTAACGACTCACCATGGCCCAGGCCACTGCTTTaGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCCCTCTTT +
Preference number: 1 (lower is better)
Translates to: SNSSANDSPWPRPLL*ALLTHLIINFYALF
Trigger: AAAGAGGGCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGTGAGTCGTTAGCAGAGGAGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR TCA 90 bp CCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTaGTCTCATCTCTGCAGAGCTGTGCGTCAGGAAAGGGCACAGCAG +
Preference number: 1 (lower is better)
Translates to: PFQFKYISDLSLYSA*SHLCRAVRQERAQQ
Trigger: CTGCTGTGCCCTTTCCTGACGCACAGCTCTGCAGAGATGAGATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR CCA 90 bp AGAATGGCATGCAACTCTTTATTGTTCCTAGTCCCCGTGTGCACTTaGCACTCCAGCATTAACTTCACAGACAGTGTGAATAAAGGGCTC +
Preference number: 1 (lower is better)
Translates to: RMACNSLLFLVPVCT*HSSINFTDSVNKGL
Trigger: GAGCCCTTTATTCACACTGTCTGTGAAGTTAATGCTGGAGTGCCAAGTGCACACGGGGACTAGGAACAATAAAGAGTTGCATGCCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR TCA 90 bp GAGCCAACCTCTCTCAGAAAGACAATAAGGGCTGCCTGGAAATTCTaGAAATTTCATGACCTACATGTAAGTCTTTACATACTCCAGTCA +
Preference number: 1 (lower is better)
Translates to: EPTSLRKTIRAAWKF*KFHDLHVSLYILQS
Trigger: TGACTGGAGTATGTAAAGACTTACATGTAGGTCATGAAATTTTCAGAATTTCCAGGCAGCCCTTATTGTCTTTCTGAGAGAGGTTGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR TCA 90 bp TCTCAGAAAGACAATAAGGGCTGCCTGGAAATTCTGAAAATTTCATaGCCTACATGTAAGTCTTTACATACTCCAGTCATAGGACAAAAC +
Preference number: 1 (lower is better)
Translates to: SQKDNKGCLEILKIS*PTCKSLHTPVIGQN
Trigger: GTTTTGTCCTATGACTGGAGTATGTAAAGACTTACATGTAGGTCATGAAATTTTCAGAATTTCCAGGCAGCCCTTATTGTCTTTCTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR-3UTR CCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACCCCAGGCCACTGCTTTaGGCTCTGCTAACTCACTTA +
Preference number: 2 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHPRPLL*ALLTHL
Trigger: TAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGG...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR-3UTR GCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCTGCTTCCCCAGTGCCTaGCACCTATCAGGTGTCTGT +
Preference number: 2 (lower is better)
Translates to: AQATALGSANSLNHQLLRCFPSA*HLSGVC
Trigger: ACAGACACCTGATAGGTGGCAGGCACTGGGGAAGCA...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR-3UTR GCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCATCTCTGCAGAGCTGTaGGTCAGGAAAGGGCACAGC +
Preference number: 2 (lower is better)
Translates to: AQATALGSANSLNHQLLRISAEL*VRKGHS
Trigger: GCTGTGCCCTTTCCTGACGCACAGCTCTGCAGAGAT...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR-3UTR GCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTATCTCTGCAGAGCTGTaGGTCAGGAAAGGGCACAGC +
Preference number: 2 (lower is better)
Translates to: TMAQATALGSANSLNHQLISAEL*VRKGHS
Trigger: GCTGTGCCCTTTCCTGACGCACAGCTCTGCAGAGAT...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR-3UTR GCA 90 bp TCTAGTACCACCGTCACTAACTCCTTTAATGTCTTCCCAAATCTCTGGAGGAAGTGCTTCCCCAGTGCCTaGCACCTATCAGGTGTCTGT +
Preference number: 2 (lower is better)
Translates to: SSTTVTNSFNVFPNLWRKCFPSA*HLSGVC
Trigger: ACAGACACCTGATAGGTGGCAGGCACTGGGGAAGCA...CTTCCTCCAGAGATTTGGGAAGACATTAAAGGAGTTAGTGACGGTGGTACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR-3UTR CCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCCCCAGGCCACTGCTTTaGGCTCTGCTAACTCACTTA +
Preference number: 2 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSPRPLL*ALLTHL
Trigger: TAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGG...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR-3UTR TCA 90 bp CATTCTCCTAGCTCTGCTAAGAATAATAAAAGTGTCAAGGTCACACCAGCTCCGAGACTAAGATGGTTTTaGGGGCACAGGTGGGTGGTG +
Preference number: 2 (lower is better)
Translates to: HSPSSAKNNKSVKVTPAPRLRWF*GHRWVV
Trigger: CACCACCCACCTGTGCCCTCAAAACCATCTTAGTCT...CGGAGCTGGTGTGACCTTGACACTTTTATTATTCTTAGCAGAGCTAGGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR-3UTR CCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACTATAAAGGAGATCTCTaGGTTTATTTCCTTGTGACT +
Preference number: 2 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHYKGDL*VYFLVT
Trigger: AGTCACAAGGAAATAAACCCAGAGATCTCCTTTATA...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR-3UTR GCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATTCAGGCTTTCCCGTCTaGTTCCCCAGTGCCTGCCAC +
Preference number: 2 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDSGFPV*FPSACH
Trigger: GTGGCAGGCACTGGGGAAGCAGACGGGAAAGCCTGA...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR-3UTR CCA 90 bp CATTCTCCTAGCTCTGCTAAGAATAATAAAAGTGTCAAGGTCACACCAGCTCCGAAGCCAGGGCTGGGTTaGAAAGAGTATCCCAGGAAT +
Preference number: 2 (lower is better)
Translates to: HSPSSAKNNKSVKVTPAPKPGLG*KEYPRN
Trigger: ATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTT...CGGAGCTGGTGTGACCTTGACACTTTTATTATTCTTAGCAGAGCTAGGAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR-3UTR GCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATCGTCTGCTTCCCCAGTaGCTGCCACCTATCAGGTGT +
Preference number: 2 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDRLLPQ*LPPIRC
Trigger: ACACCTGATAGGTGGCAGGCACTGGGGAAGCAGACG...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR-3UTR GCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGCGTCTGCTTCCCCAGTaGCTGCCACCTATCAGGTGT +
Preference number: 2 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPRLLPQ*LPPIRC
Trigger: ACACCTGATAGGTGGCAGGCACTGGGGAAGCAGACG...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR-3UTR TCA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCTCTCTGTATTCAGCCTaGTCTCATCTCTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCSLYSA*SHLCRA
Trigger: AGCTCTGCAGAGATGAGATCAGGCTGAATACAGAGA...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR-3UTR TCA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCGAATTGTCAGGAGAATaGGAAAGAAGCGCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFELSGE*ERSAAW
Trigger: CCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATTC...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000222013.2
ENSMUST00000222481.2
3UTR CAA 90 bp CCTGGAAAGAAACCAAACTGCCTCTCAAGTACCCATCACATGATATaGCATAATGTCAGTAACATCGTGCTGTTTTTAATGTTTAAAAAT +
Preference number: 2 (lower is better)
Translates to: PGKKPNCLSSTHHMI*HNVSNIVLFLMFKN
Trigger: ATTTTTAAACATTAAAAACAGCACGATGTTACTGACATTATGCAATATCATGTGATGGGTACTTGAGAGGCAGTTTGGTTTCTTTCCAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR-3UTR TCA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTGGGTTTATTTCCTTGTaGCTTAAGCCCTTTCAATTT +
Preference number: 2 (lower is better)
Translates to: KAMILIQNTGYPFARYSLGFISL*LKPFQF
Trigger: AAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCC...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR-3UTR CCA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCTATAAAGGAGATCTCTaGGTTTATTTCCTTGTGACT +
Preference number: 2 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCYKGDL*VYFLVT
Trigger: AGTCACAAGGAAATAAACCCAGAGATCTCCTTTATA...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR CCA 72 bp CTGCCCTCCTCCAACTCCTCTGCTAACGACTCACCATaGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCAC +
Preference number: 3 (lower is better)
Translates to: LPSSNSSANDSP*PRPLLWALLTH
Trigger: GTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGTGAGTCGTTAGCAGAGGAGTTGGAGGAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR TCA 72 bp AGTGCCTGTGGTGACGGTGACAATGGAGATGACTGGTaGCCGTCCTGTCAGGCTTTCCCGTCTGCTTCCCCA +
Preference number: 3 (lower is better)
Translates to: SACGDGDNGDDW*PSCQAFPSASP
Trigger: TGGGGAAGCAGACGGGAAAGCCTGACAGGACGGTCACCAGTCATCTCCATTGTCACCGTCACCACAGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR CCA 72 bp TTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTaGGTTGGAAAGAGTATCCCAGGAATACACTGCCCT +
Preference number: 3 (lower is better)
Translates to: LRAQVGGVGSQG*VGKSIPGIHCP
Trigger: AGGGCAGTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR TCA 72 bp ACTCAAACAGCAAGGCAGTGGGACACGGAGCAGCTATaGGCACAGTGTCAAGTGAACCACACAGGTCCAGTC +
Preference number: 3 (lower is better)
Translates to: TQTARQWDTEQL*AQCQVNHTGPV
Trigger: GACTGGACCTGTGTGGTTCACTTGACACTGTGCTCATAGCTGCTCCGTGTCCCACTGCCTTGCTGTTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR GCA 72 bp CAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACTaGCCTCCTCCAACTCCTCTGCTAACGACTCACCAT +
Preference number: 3 (lower is better)
Translates to: QGWVGKSIPGIH*PPPTPLLTTHH
Trigger: ATGGTGAGTCGTTAGCAGAGGAGTTGGAGGAGGGCAGTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR TCA 72 bp AGTGGGACACGGAGCAGCTATGAGCACAGTGTCAAGTaGACCACACAGGTCCAGTCAGTGATGGACATCTCA +
Preference number: 3 (lower is better)
Translates to: SGTRSSYEHSVK*TTQVQSVMDIS
Trigger: TGAGATGTCCATCACTGACTGGACCTGTGTGGTTCACTTGACACTGTGCTCATAGCTGCTCCGTGTCCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR TCA 72 bp CTGCTTCCCCAGTGCCTGCCACCTATCAGGTGTCTGTaGTGCATAAACACGATGAGTAATGAGGATGGGTCA +
Preference number: 3 (lower is better)
Translates to: LLPQCLPPIRCL*CINTMSNEDGS
Trigger: TGACCCATCCTCATTACTCATCGTGTTTATGCATCACAGACACCTGATAGGTGGCAGGCACTGGGGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
3UTR CCA 72 bp ACCGTCACTAACTCCTTTAATGTCTTCCCAAATCTCTaGAGGAAGGAAAGGCCTAGCACTTGGGGCTGGGGA +
Preference number: 3 (lower is better)
Translates to: TVTNSFNVFPNL*RKERPSTWGWG
Trigger: TCCCCAGCCCCAAGTGCTAGGCCTTTCCTTCCTCCAGAGATTTGGGAAGACATTAAAGGAGTTAGTGACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR TCA 72 bp GTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGTaGGGAAGCCAGCTGGGAAAATTAACCGAATTGTCA +
Preference number: 3 (lower is better)
Translates to: VMAVSSSPPYTW*GSQLGKLTELS
Trigger: TGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCACCACGTATAAGGGGGTGAAGAAGACACGGCCATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000222013.2
ENSMUST00000222481.2
3UTR TCA 72 bp TTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTaGTCTCATCTCTGCAGAGCTGTGCGTCAGGAAAGG +
Preference number: 3 (lower is better)
Translates to: FKYISDLSLYSA*SHLCRAVRQER
Trigger: CCTTTCCTGACGCACAGCTCTGCAGAGATGAGATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR CCA 72 bp TGCAACTCTTTATTGTTCCTAGTCCCCGTGTGCACTTaGCACTCCAGCATTAACTTCACAGACAGTGTGAAT +
Preference number: 3 (lower is better)
Translates to: CNSLLFLVPVCT*HSSINFTDSVN
Trigger: ATTCACACTGTCTGTGAAGTTAATGCTGGAGTGCCAAGTGCACACGGGGACTAGGAACAATAAAGAGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR TCA 72 bp CCTACAATTACAGAGAACAGATACATCTGGTTAAGGTaGCACATTTCTTCTCTGGCTAGAGTGATGGCCGTG +
Preference number: 3 (lower is better)
Translates to: PTITENRYIWLR*HISSLARVMAV
Trigger: CACGGCCATCACTCTAGCCAGAGAAGAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000222013.2
ENSMUST00000222481.2
3UTR-3UTR CAA 90 bp CATTCTCCTAGCTCTGCTAAGAATAATAAAAGTGTCAAGGTCACACCAGCTCCGACACTACCAGTGAAATaGGTTTCTGCTTCATCTAAT +
Preference number: 3 (lower is better)
Translates to: HSPSSAKNNKSVKVTPAPTLPVK*VSASSN
Trigger: ATTAGATGAAGCAGAAACCAATTTCACTGGTAGTGT...CGGAGCTGGTGTGACCTTGACACTTTTATTATTCTTAGCAGAGCTAGGAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR TCA 72 bp ACTAGAGCTGATCTACGTAAACACACTATGATCAAATaGCAAACAGTTTCAATGCAGGATGAAGACAGGCAC +
Preference number: 3 (lower is better)
Translates to: TRADLRKHTMIK*QTVSMQDEDRH
Trigger: GTGCCTGTCTTCATCCTGCATTGAAACTGTTTGTCATTTGATCATAGTGTGTTTACGTAGATCAGCTCTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR TCA 72 bp GAAAGAAACCAAACTGCCTCTCAAGTACCCATCACATaGTATTGCATAATGTCAGTAACATCGTGCTGTTTT +
Preference number: 3 (lower is better)
Translates to: ERNQTASQVPIT*YCIMSVTSCCF
Trigger: AAAACAGCACGATGTTACTGACATTATGCAATATCATGTGATGGGTACTTGAGAGGCAGTTTGGTTTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR TCA 72 bp GACAATAAGGGCTGCCTGGAAATTCTGAAAATTTCATaGCCTACATGTAAGTCTTTACATACTCCAGTCATA +
Preference number: 3 (lower is better)
Translates to: DNKGCLEILKIS*PTCKSLHTPVI
Trigger: TATGACTGGAGTATGTAAAGACTTACATGTAGGTCATGAAATTTTCAGAATTTCCAGGCAGCCCTTATTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR TCA 72 bp TCTCTCAGAAAGACAATAAGGGCTGCCTGGAAATTCTaGAAATTTCATGACCTACATGTAAGTCTTTACATA +
Preference number: 3 (lower is better)
Translates to: SLRKTIRAAWKF*KFHDLHVSLYI
Trigger: TATGTAAAGACTTACATGTAGGTCATGAAATTTTCAGAATTTCCAGGCAGCCCTTATTGTCTTTCTGAGAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR TCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACGCATGGTGGGCTCACTaGGAATATCTGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHAWWAH*EYLPGR
Trigger: GCGCCCTGGCAGATATTCTCAGTGAGCCCACCATGC...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTCTGGGAACGGCCCATTaGAAGATGCTGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSLGTAH*KMLRRS
Trigger: GCTCCTCCTCAGCATCTTTCAATGGGCCGTTCCCAG...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACACAGAGAGGTGCCTGTaGCAGGGACGGATGCCTGTC +
Preference number: 4 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHTERCL*QGRMPV
Trigger: GACAGGCATCCGTCCCTGCCACAGGCACCTCTCTGT...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATTCTGCACAGCAGTTaGGTTGGGACTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSILHSS*VGTGPR
Trigger: CCTGGGCCCAGTCCCAACCCAACTGCTGTGCAGAAT...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTAGGACATCTGCCTCGTaGTGGTTCTCTGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSRTSAS*WFSASA
Trigger: GGCAGATGCAGAGAACCATCACGAGGCAGATGTCCT...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTTCAGTAACAGAGAGGTaGCTGTGGCAGGGACGGATG +
Preference number: 4 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSSVTER*LWQGRM
Trigger: CATCCGTCCCTGCCACAGGCACCTCTCTGTTACTGA...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTCTTCCCCAAAGCCCGTaGTATCTGAGGAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSLPQSP*YLRRLH
Trigger: ATGCAGCCTCCTCAGATAGCACGGGCTTTGGGGAAG...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTAGAGCCTGGTGTAACTaGAGCGCTGGCTTCGCTTGT +
Preference number: 4 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSRAWCN*SAGFAC
Trigger: ACAAGCGAAGCCAGCGCTCCAGTTACACCAGGCTCT...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTCTGATGAACGTGAGATaGGATGTTGGGAACCGCCAG +
Preference number: 4 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSLMNVR*DVGNRQ
Trigger: CTGGCGGTTCCCAACATCTCATCTCACGTTCATCAG...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTCTGTCAGCATCCTCCTaGACTCCTGTTGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSLSASS*TPVASE
Trigger: CTCAGAAGCAACAGGAGTGCAGGAGGATGCTGACAG...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTGTCCGGTATGGCCACTaGTCAGTAAGGTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSVRYGH*SVRLIQ
Trigger: CTGGATCAACCTTACTGAGCAGTGGCCATACCGGAC...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACCAACTCAGATTACTGTaGCGTGGGGCTCCCTCGTCT +
Preference number: 4 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHQLRLL*RGAPSS
Trigger: AGACGAGGGAGCCCCACGGCACAGTAATCTGAGTTG...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCATCAGTGGCGTCTaGCCACACTCGTTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSIISGV*PHSFLS
Trigger: TGAGAGGAACGAGTGTGGCCAGACGCCACTGATGAT...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTGCACTATGTCGGCGTaGCCTCTGCCCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLCTMSA*PLPAAQ
Trigger: CTGGGCAGCGGGCAGAGGCCACGCCGACATAGTGCA...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTTGGGAGAACTCTCATTaGACCTCACTCCCGAATCGG +
Preference number: 4 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSWENSH*TSLPNR
Trigger: CCGATTCGGGAGTGAGGTCCAATGAGAGTTCTCCCA...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp CACATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTTGCCAGTCTGGTGCTaGGAGCCCAGGCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: HISSLARVMAVSSSPPYTLPVWC*EPRPSS
Trigger: GGAACTGGGCCTGGGCTCTCAGCACCAGACTGGCAA...CGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTGCCAGTCTGGTGCTaGGAGCCCAGGCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLLPVWC*EPRPSS
Trigger: GGAACTGGGCCTGGGCTCTCAGCACCAGACTGGCAA...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTGGCCGCTGTAGTAGCTaGTGTGGGGCTGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFGRCSS*CGAVGT
Trigger: TGTCCCCACAGCCCCACAGCAGCTACTACAGCGGCC...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACAATACTGAGGCAGCATaGCCTGGTCCAGCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHNTEAA*PGPALL
Trigger: TAGAAGGGCTGGACCAGGGCATGCTGCCTCAGTATT...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACTTGTTGACGACCCTGTaGCCCCTTCTAACTGGGACA +
Preference number: 4 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHLLTTL*PLLTGT
Trigger: TGTCCCAGTTAGAAGGGGGCACAGGGTCGTCAACAA...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp AAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCGCTGCTGTGGGGCTGTaGGGACACAACGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: KPAGKINRIVRRMRKKRCAAVGL*GHNAAW
Trigger: CCAGGCGGCGTTGTGTCCCCACAGCCCCACAGCAGC...GCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACGCCAGGGTAATACCTTaGCGTGTAAAGGTATGGGGC +
Preference number: 4 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHARVIP*RVKVWG
Trigger: GCCCCATACCTTTACACGCCAAGGTATTACCCTGGC...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGGCATGGTGGGCTCACTaGGAATATCTGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWAWWAH*EYLPGR
Trigger: GCGCCCTGGCAGATATTCTCAGTGAGCCCACCATGC...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTGCATGGTGGGCTCACTaGGAATATCTGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLAWWAH*EYLPGR
Trigger: GCGCCCTGGCAGATATTCTCAGTGAGCCCACCATGC...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACTCACAAACATCAGCTTaGAGAGGAGCTCCAGGTACC +
Preference number: 4 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHSQTSA*RGAPGT
Trigger: GGTACCTGGAGCTCCTCTTCAAGCTGATGTTTGTGA...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTGCCCACACAGATGGGTaGCTGCATGGTGGGCTCACT +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFAHTDG*LHGGLT
Trigger: AGTGAGCCCACCATGCAGCCACCCATCTGTGTGGGC...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTACAGAGAGGTGCCTGTaGCAGGGACGGATGCCTGTC +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLTERCL*QGRMPV
Trigger: GACAGGCATCCGTCCCTGCCACAGGCACCTCTCTGT...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACCATCAAAGTTCTGATTaGCTCTGTTGGTGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHHQSSD*LCWWAQ
Trigger: CTGCGCCCACCAACAGAGCCAATCAGAACTTTGATG...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACGGTTTGTATCAACTGTaGAAGCAAACACCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHGLYQL*KQTPGR
Trigger: TCGGCCTGGTGTTTGCTTTCACAGTTGATACAAACC...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTACCACCAGCCTCGTCTaGTTCTGCGTGAAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLTTSLV*FCVKLS
Trigger: CGACAGCTTCACGCAGAATCAGACGAGGCTGGTGGT...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTCTGGGAACGGCCCATTaGAAGATGCTGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFLGTAH*KMLRRS
Trigger: GCTCCTCCTCAGCATCTTTCAATGGGCCGTTCCCAG...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGCTGGGAACGGCCCATTaGAAGATGCTGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWLGTAH*KMLRRS
Trigger: GCTCCTCCTCAGCATCTTTCAATGGGCCGTTCCCAG...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTTCACCATTGTCGCATTaGCTTTCTCAACAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSSPLSH*LSQQPN
Trigger: ATTGGGCTGTTGAGAAAGGCAATGCGACAATGGTGA...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GTGGTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGGGCCGCTGTAGTAGCTaGTGTGGGGCTGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: VVRKPAGKINRIVRRMRKGRCSS*CGAVGT
Trigger: TGTCCCCACAGCCCCACAGCAGCTACTACAGCGGCC...CTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACCCGTCTCATGGTTTGTaGACTGATGTCACTGAACCA +
Preference number: 4 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHPSHGL*TDVTEP
Trigger: TGGTTCAGTGACATCAGTCCACAAACCATGAGACGG...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTGGAGTCCTGGGAATTaGGACTCGAGAGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLWSPGN*DSRDLG
Trigger: CCCCAAGTCTCTCGAGTCTCAATTCCCAGGACTCCA...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp CACATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGAGTCCTGGGAATTaGGACTCGAGAGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: HISSLARVMAVSSSPPYTWSPGN*DSRDLG
Trigger: CCCCAAGTCTCTCGAGTCTCAATTCCCAGGACTCCA...CGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222481.2
CDS-3UTR TCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCTGGACATCCGAGCTATaGCAGGATCTTGCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRWTSEL*QDLAGH
Trigger: GTGGCCTGCAAGATCCTGTCATAGCTCGGATGTCCA...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CACATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGACACAGATGGGTGGCTaGATGGTGGGCTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: HISSLARVMAVSSSPPYTTQMGG*MVGSLR
Trigger: TCTCAGTGAGCCCACCATGCAGCCACCCATCTGTGT...CGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTGTACCCAATGTGCCTTaGCAGTCTGGTGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLVPNVP*QSGAES
Trigger: GCTCTCAGCACCAGACTGGCAAGGCACATTGGGTAC...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CACATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGCAGCACTTTATCTTaGTCACAGGCGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: HISSLARVMAVSSSPPYTCSTLS*SQASRP
Trigger: CGGCCTGGACGCCTGTGAGCAAGATAAAGTGCTGCA...CGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTGGAGGAGCAGACAGATaGAGGCTGACTGTACCCAGA +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFGGADR*RLTVPR
Trigger: TCTGGGTACAGTCAGCCTGCATCTGTCTGCTCCTCC...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCCTTCCCCAAAGCCCGTaGTATCTGAGGAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRLPQSP*YLRRLH
Trigger: ATGCAGCCTCCTCAGATAGCACGGGCTTTGGGGAAG...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GTGGTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGGCCCACACAGATGGGTaGCTGCATGGTGGGCTCACT +
Preference number: 4 (lower is better)
Translates to: VVRKPAGKINRIVRRMRKAHTDG*LHGGLT
Trigger: AGTGAGCCCACCATGCAGCCACCCATCTGTGTGGGC...CTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTCACTGTCAGATGTTTTaGGTCAACTCGGAATATAGC +
Preference number: 4 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSHCQMF*VNSEYS
Trigger: GCTATATTCCGAGTTGACCCAAAACATCTGACAGTG...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTAGCTGTCGATGGTCTTaGCCATCCTGGCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFSCRWS*PSWPSA
Trigger: AGCTGATGGCCAGGATGGCCAAGACCATCGACAGCT...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTCCAGGACGTCCGGTATaGCCACTGCTCAGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFPGRPV*PLLSKV
Trigger: AACCTTACTGAGCAGTGGCCATACCGGACGTCCTGG...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGCCAGGACGTCCGGTATaGCCACTGCTCAGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWPGRPV*PLLSKV
Trigger: AACCTTACTGAGCAGTGGCCATACCGGACGTCCTGG...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp TCTAGTACCACCGTCACTAACTCCTTTAATGTCTTCCCAAATCTCTGGAGGAAGCCCTCGAGGAGGCTGTaGGTGAAGGAAGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SSTTVTNSFNVFPNLWRKPSRRL*VKEGPQ
Trigger: CTGAGGGCCTTCCTTCACCCACAGCCTCCTCGAGGG...CTTCCTCCAGAGATTTGGGAAGACATTAAAGGAGTTAGTGACGGTGGTACTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR CCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCTTCGCCTTTTCCAGCTaGGAGTCATCCGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRFAFSS*ESSAAS
Trigger: TGAGGCAGCGGATGACTCCCAGCTGGAAAAGGCGAA...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGTTCACACATTCCAAATaGCCCTTTCGGGCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWFTHSK*PFRAAH
Trigger: GTGGGCTGCCCGAAAGGGTCATTTGGAATGTGTGAA...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTCGTCTGATTCTGCGTaGAGCTGTCGATGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFSSDSA*SCRWSW
Trigger: CCAAGACCATCGACAGCTTCACGCAGAATCAGACGA...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACAATAAAAGGGCCCTTTaGAAACAGAACTCGGACAGT +
Preference number: 4 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHNKRAL*KQNSDS
Trigger: ACTGTCCGAGTTCTGTTTTCAAAGGGCCCTTTTATT...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGCCCATTGAAAGATGCTaGGGAGGAGCAGACAGATGC +
Preference number: 4 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWPIERC*GGADRC
Trigger: GCATCTGTCTGCTCCTCCTCAGCATCTTTCAATGGG...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTCCCATTGAAAGATGCTaGGGAGGAGCAGACAGATGC +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLPIERC*GGADRC
Trigger: GCATCTGTCTGCTCCTCCTCAGCATCTTTCAATGGG...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCCTGATGAACGTGAGATaGGATGTTGGGAACCGCCAG +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRLMNVR*DVGNRQ
Trigger: CTGGCGGTTCCCAACATCTCATCTCACGTTCATCAG...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCCCCACTTCCCCACTGTaGATACAAGCCCACACAGAT +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRPTSPL*IQAHTD
Trigger: ATCTGTGTGGGCTTGTATGCACAGTGGGGAAGTGGG...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGGTCCGGTATGGCCACTaGTCAGTAAGGTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWVRYGH*SVRLIQ
Trigger: CTGGATCAACCTTACTGAGCAGTGGCCATACCGGAC...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACGATCCAGGTTTACCGTaGATGGCAAAAAGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHDPGLP*MAKRSL
Trigger: TAAAGACCTTTTTGCCATGCACGGTAAACCTGGATC...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTAATACTGAGGCAGCATaGCCTGGTCCAGCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFNTEAA*PGPALL
Trigger: TAGAAGGGCTGGACCAGGGCATGCTGCCTCAGTATT...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACTCTCTATACTCGGCCTaGACCTTATCAGTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHSLYSA*TLSVSF
Trigger: AAAGCTTACTGATAAGGTGCAGGCCGAGTATAGAGA...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp TCTAGTACCACCGTCACTAACTCCTTTAATGTCTTCCCAAATCTCTGGAGGAAGGCCCACACAGATGGGTaGCTGCATGGTGGGCTCACT +
Preference number: 4 (lower is better)
Translates to: SSTTVTNSFNVFPNLWRKAHTDG*LHGGLT
Trigger: AGTGAGCCCACCATGCAGCCACCCATCTGTGTGGGC...CTTCCTCCAGAGATTTGGGAAGACATTAAAGGAGTTAGTGACGGTGGTACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR CCA 90 bp CACATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGGCCAGGGTAATACCTTaGCGTGTAAAGGTATGGGGC +
Preference number: 4 (lower is better)
Translates to: HISSLARVMAVSSSPPYTARVIP*RVKVWG
Trigger: GCCCCATACCTTTACACGCCAAGGTATTACCCTGGC...CGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp GTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGACAGAGAGGTGCCTGTaGCAGGGACGGATGCTAGGC +
Preference number: 4 (lower is better)
Translates to: VRKPAGKINRIVRRMRKKTERCL*QGRMLG
Trigger: GCCTAGCATCCGTCCCTGCCACAGGCACCTCTCTGT...CTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGCGAACAATTTCAACATaGCCACCTCTCACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWRTIST*PPLTAP
Trigger: TGGCGCTGTGAGAGGTGGTCATGTTGAAATTGTTCG...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCTCACAAACATCAGCTTaGAGAGGAGCTCCAGGTACC +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRSQTSA*RGAPGT
Trigger: GGTACCTGGAGCTCCTCTTCAAGCTGATGTTTGTGA...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTGGAGGCGTTTTCTCTaGGAATTCAGGAGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLWRRFL*EFRRES
Trigger: GGACTCTCTCCTGAATTCTCAGAGAAAACGCCTCCA...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp AATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATGGGCAGATACTAAGACCACCAGCCTCGTCTaGTTCTGCGTGAAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: NCQENEKEALLGLWADTKTTSLV*FCVKLS
Trigger: CGACAGCTTCACGCAGAATCAGACGAGGCTGGTGGT...CTTAGTATCTGCCCATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp AAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCATGGTTGTGCAATACTaGGGCAGCATGCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: KPAGKINRIVRRMRKKRCMVVQY*GSMPWS
Trigger: GGACCAGGGCATGCTGCCTCAGTATTGCACAACCAT...GCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTCAGTGGGGTATTATCTaGCTCTTCTGTCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLQWGII*LFCPRL
Trigger: GAGTCTGGGACAGAAGAGTCAGATAATACCCCACTG...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTCAGTGGGGTATTATCTaGCTCTTCTGTCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFQWGII*LFCPRL
Trigger: GAGTCTGGGACAGAAGAGTCAGATAATACCCCACTG...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCGTACCCAATGTGCCTTaGCAGTCTGGTGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSVPNVP*QSGAES
Trigger: GCTCTCAGCACCAGACTGGCAAGGCACATTGGGTAC...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGAGAGAGTCCAGCACTTaGCACCATGTTCGACAGTTC +
Preference number: 4 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWRESST*HHVRQF
Trigger: GAACTGTCGAACATGGTGGCAAGTGCTGGACTCTCT...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp GTGGTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGTCAGTAACAGAGAGGTaGCTGTGGCAGGGACGGATG +
Preference number: 4 (lower is better)
Translates to: VVRKPAGKINRIVRRMRKSVTER*LWQGRM
Trigger: CATCCGTCCCTGCCACAGGCACCTCTCTGTTACTGA...CTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGAGAGACTTGGGGTTCTaGGAGTTTGTGACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWRDLGF*EFVTAN
Trigger: GTTGGCAGTCACAAACTCGCAGAACCCCAAGTCTCT...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222481.2
CDS-3UTR CCA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGTCTCGCCTGCTTTGTTaGGCCTGTAAAGTAACCGTC +
Preference number: 4 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWSRLLC*ACKVTV
Trigger: GACGGTTACTTTACAGGCCCAACAAAGCAGGCGAGA...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCATGAGCCACGAGAACTaGAAAAGGGGCTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRMSHEN*KRGSIC
Trigger: GCAGATTGAGCCCCTTTTCCAGTTCTCGTGGCTCAT...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCGCTGCTGTGGGGCTGTaGGGACACAACGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTAAVGL*GHNAAW
Trigger: CCAGGCGGCGTTGTGTCCCCACAGCCCCACAGCAGC...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCAGAGCCTGGTGTAACTaGAGCGCTGGCTTCGCTTGT +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSRAWCN*SAGFAC
Trigger: ACAAGCGAAGCCAGCGCTCCAGTTACACCAGGCTCT...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTCCCCTCTTTAGATGCTaGTATAAGCGCAGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFPLFRC*YKRSPV
Trigger: AACTGGACTGCGCTTATATCAGCATCTAAAGAGGGG...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp AAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCCTGATGAACGTGAGATaGGATGTTGGGAACCGCCAG +
Preference number: 4 (lower is better)
Translates to: KPAGKINRIVRRMRKKRCLMNVR*DVGNRQ
Trigger: CTGGCGGTTCCCAACATCTCATCTCACGTTCATCAG...GCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp GGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATTGGGGCAGTTCACTGTaGGAAGTGCGGCGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: GKINRIVRRMRKKRCLVYWGSSL*EVRRAD
Trigger: ATCTGCTCGCCGCACTTCTCACAGTGAACTGCCCCA...ATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCTCAGTTCTTCAAAGCTaGAGTTCAGGGTGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRSVLQS*SSGCRE
Trigger: CTCCCTACACCCTGAACTTCAGCTTTGAAGAACTGA...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTGGTTCTGCGAGTTTGTaGCTGCCAACTCAGATTACT +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFGSASL*LPTQIT
Trigger: AGTAATCTGAGTTGGCAGTCACAAACTCGCAGAACC...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCATGAATGGAGCCCCCTaGAGAACTCTGACCTATGTA +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRMNGAP*RTLTYV
Trigger: TACATAGGTCAGAGTTCTTCAGGGGGCTCCATTCAT...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTATCTCATCAAAGTTCTaGTTGGCTCTGTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFISSKF*LALLVG
Trigger: GCCCACCAACAGAGCCAATCAGAACTTTGATGAGAT...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCAGTAGGCCATTGTTCTaGTCTCTGGGCAAACTCGTT +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRSRPLF*SLGKLV
Trigger: AACGAGTTTGCCCAGAGATCAGAACAATGGCCTACT...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCTGCTTTTCTGGTGGCTaGAGTCAATGTTGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRCFSGG*SQCCRE
Trigger: CTCCCTACAACATTGACTGCAGCCACCAGAAAAGCA...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCCTCACTGAGAATATCTaGCAGGGCGCTGCTATACAA +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRLTENI*QGAAIQ
Trigger: TTGTATAGCAGCGCCCTGGCAGATATTCTCAGTGAG...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CATTCTCCTAGCTCTGCTAAGAATAATAAAAGTGTCAAGGTCACACCAGCTCCGACACAGATGGGTGGCTaGATGGTGGGCTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: HSPSSAKNNKSVKVTPAPTQMGG*MVGSLR
Trigger: TCTCAGTGAGCCCACCATGCAGCCACCCATCTGTGT...CGGAGCTGGTGTGACCTTGACACTTTTATTATTCTTAGCAGAGCTAGGAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR GCA 90 bp CATTCTCCTAGCTCTGCTAAGAATAATAAAAGTGTCAAGGTCACACCAGCTCCGTGCAGCACTTTATCTTaGTCACAGGCGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: HSPSSAKNNKSVKVTPAPCSTLS*SQASRP
Trigger: CGGCCTGGACGCCTGTGAGCAAGATAAAGTGCTGCA...CGGAGCTGGTGTGACCTTGACACTTTTATTATTCTTAGCAGAGCTAGGAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR GCA 90 bp CACATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTCTGCATCTGCCTTCTaGGGTAAGTATCCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: HISSLARVMAVSSSPPYTSASAF*GKYPFC
Trigger: ACAGAAGGGATACTTACCGCAGAAGGCAGATGCAGA...CGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTAGATCAAAGGACATCTaGCTCGTGATGGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLRSKDI*LVMVLC
Trigger: GCAGAGAACCATCACGAGGCAGATGTCCTTTGATCT...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTGTGGCAGGGACGGATaGCTGTCTCTGTTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFCGRDG*LSLFVK
Trigger: TTTAACAAACAGAGACAGGCATCCGTCCCTGCCACA...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TCAATGCAGGATGAAGACAGGCACACCTCTAGCCTAAATGTATGTGGTCATTCTTCAGTAACAGAGAGGTaGCTGTGGCAGGGACGGATG +
Preference number: 4 (lower is better)
Translates to: SMQDEDRHTSSLNVCGHSSVTER*LWQGRM
Trigger: CATCCGTCCCTGCCACAGGCACCTCTCTGTTACTGA...AGAATGACCACATACATTTAGGCTAGAGGTGTGCCTGTCTTCATCCTGCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR GCA 90 bp GTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCAACTCAGATTACTGTaGCGTGGGGCTCCCTCGTCT +
Preference number: 4 (lower is better)
Translates to: VRKPAGKINRIVRRMRKKQLRLL*RGAPSS
Trigger: AGACGAGGGAGCCCCACGGCACAGTAATCTGAGTTG...CTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000222013.2
ENSMUST00000222481.2
CDS-3UTR GCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCTTGTTGACGACCCTGTaGCCCCTTCTAACTGGGACA +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSLLTTL*PLLTGT
Trigger: TGTCCCAGTTAGAAGGGGGCACAGGGTCGTCAACAA...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGGCGGCATTTTCTTCCTaGCAACTCAGATTACTGTGC +
Preference number: 4 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWAAFSS*QLRLLC
Trigger: GCACAGTAATCTGAGTTGGCAGGAAGAAAATGCCGC...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATTGCACTATGTCGGCGTaGCCTCTGCCCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDCTMSA*PLPAAQ
Trigger: CTGGGCAGCGGGCAGAGGCCACGCCGACATAGTGCA...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp AATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATGGGCAGATACTAAGAGCTGTCGATGGTCTTaGCCATCCTGGCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: NCQENEKEALLGLWADTKSCRWS*PSWPSA
Trigger: AGCTGATGGCCAGGATGGCCAAGACCATCGACAGCT...CTTAGTATCTGCCCATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTGCTGCTGTGGGGCTGTaGGGACACAACGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: KAMILIQNTGYPFARYSLAAVGL*GHNAAW
Trigger: CCAGGCGGCGTTGTGTCCCCACAGCCCCACAGCAGC...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCTCTTCGGGGACCACCTaGTTTTCCACACTTCTCATT +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRSSGTT*FSTLLI
Trigger: AATGAGAAGTGTGGAAAACCAGGTGGTCCCCGAAGA...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp CACATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTCTTCGGGGACCACCTaGTTTTCCACACTTCTCATT +
Preference number: 4 (lower is better)
Translates to: HISSLARVMAVSSSPPYTSSGTT*FSTLLI
Trigger: AATGAGAAGTGTGGAAAACCAGGTGGTCCCCGAAGA...CGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTGAATTAGCTCCTTCTTaGTCAACATCAGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFELAPS*STSAPM
Trigger: CATGGGAGCTGATGTTGATCAAGAAGGAGCTAATTC...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp AAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCTGGAGGCGTTTTCTCTaGGAATTCAGGAGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: KPAGKINRIVRRMRKKRCWRRFL*EFRRES
Trigger: GGACTCTCTCCTGAATTCTCAGAGAAAACGCCTCCA...GCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACGTATTTTTGGAGAAGTaGTCGAACAATTTCAACATG +
Preference number: 4 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHVFLEK*SNNFNM
Trigger: CATGTTGAAATTGTTCGAGCACTTCTCCAAAAATAC...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGTCACCATTGTCGCATTaGCTTTCTCAACAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWSPLSH*LSQQPN
Trigger: ATTGGGCTGTTGAGAAAGGCAATGCGACAATGGTGA...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTCACCATTGTCGCATTaGCTTTCTCAACAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFSPLSH*LSQQPN
Trigger: ATTGGGCTGTTGAGAAAGGCAATGCGACAATGGTGA...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp AATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATGGGCAGATACTAAGGTAGGGAGTCTCGCCTaGTTTGTTGGGCCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: NCQENEKEALLGLWADTKVGSLA*FVGPVK
Trigger: CTTTACAGGCCCAACAAAGCAGGCGAGACTCCCTAC...CTTAGTATCTGCCCATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp GTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCCCACTTCCCCACTGTaGATACAAGCCCACACAGAT +
Preference number: 4 (lower is better)
Translates to: VRKPAGKINRIVRRMRKKPTSPL*IQAHTD
Trigger: ATCTGTGTGGGCTTGTATGCACAGTGGGGAAGTGGG...CTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGCAACCCCACGATAGATaGAATGGATATGAGGATAGC +
Preference number: 4 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWQPHDR*NGYEDS
Trigger: GCTATCCTCATATCCATTGCATCTATCGTGGGGTTG...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCCAACCCCACGATAGATaGAATGGATATGAGGATAGC +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRQPHDR*NGYEDS
Trigger: GCTATCCTCATATCCATTGCATCTATCGTGGGGTTG...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCAGAGAGTCCAGCACTTaGCACCATGTTCGACAGTTC +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSRESST*HHVRQF
Trigger: GAACTGTCGAACATGGTGGCAAGTGCTGGACTCTCT...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTACAGTGTCCAGCATCTaGAGCACTTTATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLTVSSI*STLSCS
Trigger: TGAGCAAGATAAAGTGCTGCAGATGCTGGACACTGT...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp AATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATGGGCAGATACTAAGAATACTGAGGCAGCATaGCCTGGTCCAGCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: NCQENEKEALLGLWADTKNTEAA*PGPALL
Trigger: TAGAAGGGCTGGACCAGGGCATGCTGCCTCAGTATT...CTTAGTATCTGCCCATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCTTCGCTTGTGCGCCATaGTCTTCAGGTTTTCATTCT +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRFACAP*SSGFHS
Trigger: AGAATGAAAACCTGAAGAGCATGGCGCACAAGCGAA...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TCAATGCAGGATGAAGACAGGCACACCTCTAGCCTAAATGTATGTGGTCATTCTTCTGAGGAGGCTGCATaGAGCTCAGACGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: SMQDEDRHTSSLNVCGHSSEEAA*SSDASF
Trigger: GAAAGATGCGTCTGAGCTGCATGCAGCCTCCTCAGA...AGAATGACCACATACATTTAGGCTAGAGGTGTGCCTGTCTTCATCCTGCATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR CCA 90 bp CATTCTCCTAGCTCTGCTAAGAATAATAAAAGTGTCAAGGTCACACCAGCTCCGATCATCAGTGGCGTCTaGCCACACTCGTTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: HSPSSAKNNKSVKVTPAPIISGV*PHSFLS
Trigger: TGAGAGGAACGAGTGTGGCCAGACGCCACTGATGAT...CGGAGCTGGTGTGACCTTGACACTTTTATTATTCTTAGCAGAGCTAGGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR CCA 90 bp AAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCATGAGCCACGAGAACTaGAAAAGGGGCTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: KPAGKINRIVRRMRKKRCMSHEN*KRGSIC
Trigger: GCAGATTGAGCCCCTTTTCCAGTTCTCGTGGCTCAT...GCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTCTCTCCCCCAACACTaGAGAGTCTATTGTAATCTG +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFSLPQH*RVYCNL
Trigger: CAGATTACAATAGACTCTCCAGTGTTGGGGGAGAGA...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp TCAATGCAGGATGAAGACAGGCACACCTCTAGCCTAAATGTATGTGGTCATTCTGCCAGGGTAATACCTTaGCGTGTAAAGGTATGGGGC +
Preference number: 4 (lower is better)
Translates to: SMQDEDRHTSSLNVCGHSARVIP*RVKVWG
Trigger: GCCCCATACCTTTACACGCCAAGGTATTACCCTGGC...AGAATGACCACATACATTTAGGCTAGAGGTGTGCCTGTCTTCATCCTGCATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR CCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTGTAGTATGTGCTGTGTaGAGAAGATCTGCCGCTTAT +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLVVCAV*RRSAAY
Trigger: ATAAGCGGCAGATCTTCTCCACACAGCACATACTAC...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTCATTGTGGAGAGAGTaGTTGGGAGAACTCTCATTG +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLSLWRE*LGELSL
Trigger: CAATGAGAGTTCTCCCAACCACTCTCTCCACAATGA...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTACTTATCAGAGCAATTaGCTTTCGCACCATTCTGCA +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLTYQSN*LSHHSA
Trigger: TGCAGAATGGTGCGAAAGTCAATTGCTCTGATAAGT...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCCATCTTCTAGTTTCTTaGGTAAGAAGGACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRHLLVS*VRRTSH
Trigger: GTGGGAAGTCCTTCTTACTCAAGAAACTAGAAGATG...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GTGGTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGGGTTTGTATCAACTGTaGAAGCAAACACCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: VVRKPAGKINRIVRRMRKGLYQL*KQTPGR
Trigger: TCGGCCTGGTGTTTGCTTTCACAGTTGATACAAACC...CTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCTTGCCAGTCTGGTGCTaGGAGCCCAGGCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCLPVWC*EPRPSS
Trigger: GGAACTGGGCCTGGGCTCTCAGCACCAGACTGGCAA...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp AATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATGGGCAGATACTAAGTCACAAACATCAGCTTaGAGAGGAGCTCCAGGTACC +
Preference number: 4 (lower is better)
Translates to: NCQENEKEALLGLWADTKSQTSA*RGAPGT
Trigger: GGTACCTGGAGCTCCTCTTCAAGCTGATGTTTGTGA...CTTAGTATCTGCCCATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCCTCGAACATCTGCAATaGTCTCCCGTAGTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSLEHLQ*SPVVWD
Trigger: ATCCCAAACTACGGGAGATCATTGCAGATGTTCGAG...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp AAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCTCAGTTCTTCAAAGCTaGAGTTCAGGGTGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: KPAGKINRIVRRMRKKRCSVLQS*SSGCRE
Trigger: CTCCCTACACCCTGAACTTCAGCTTTGAAGAACTGA...GCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp GTGGTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGGGTTCTGCGAGTTTGTaGCTGCCAACTCAGATTACT +
Preference number: 4 (lower is better)
Translates to: VVRKPAGKINRIVRRMRKGSASL*LPTQIT
Trigger: AGTAATCTGAGTTGGCAGTCACAAACTCGCAGAACC...CTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222481.2
CDS-3UTR TCA 90 bp AATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATGGGCAGATACTAAGGCTAGGCCATTGTTCTaGTCTCTGGGCAAACTCGTT +
Preference number: 4 (lower is better)
Translates to: NCQENEKEALLGLWADTKARPLF*SLGKLV
Trigger: AACGAGTTTGCCCAGAGATCAGAACAATGGCCTAGC...CTTAGTATCTGCCCATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTCACTATTTCCACATTaGCCTGTTCAGCAGCTATCA +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFSLFPH*PVQQLS
Trigger: TGATAGCTGCTGAACAGGGCAATGTGGAAATAGTGA...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCCACTGCCACAATCAGTaGAGTCATCGAATTAGCTCC +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSHCHNQ*SHRISS
Trigger: GGAGCTAATTCGATGACTGCACTGATTGTGGCAGTG...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATCTGTCAGCATCCTCCTaGACTCCTGTTGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GKINRIVRRMRKKRCLVYLSASS*TPVASE
Trigger: CTCAGAAGCAACAGGAGTGCAGGAGGATGCTGACAG...ATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCTCTGCATCTGCCTTCTaGGGTAAGTATCCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSSASAF*GKYPFC
Trigger: ACAGAAGGGATACTTACCGCAGAAGGCAGATGCAGA...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTGGCCGCTGTAGTAGCTaGTGTGGGGCTGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: KAMILIQNTGYPFARYSLGRCSS*CGAVGT
Trigger: TGTCCCCACAGCCCCACAGCAGCTACTACAGCGGCC...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TCTAGTACCACCGTCACTAACTCCTTTAATGTCTTCCCAAATCTCTGGAGGAAGCACAGCTCCATCAGCTaGTTTCTTGTCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSTTVTNSFNVFPNLWRKHSSIS*FLVQLF
Trigger: GAAGAGCTGGACAAGAAAGCAGCTGATGGAGCTGTG...CTTCCTCCAGAGATTTGGGAAGACATTAAAGGAGTTAGTGACGGTGGTACTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR GCA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGCCGGCCATTTATGTTTaGCTTTTTGATGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWPAIYV*LFDGCA
Trigger: TGCACAACCATCAAAAAGGCAAACATAAATGGCCGG...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp TCTAGTACCACCGTCACTAACTCCTTTAATGTCTTCCCAAATCTCTGGAGGAAGAGAGACTTGGGGTTCTaGGAGTTTGTGACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SSTTVTNSFNVFPNLWRKRDLGF*EFVTAN
Trigger: GTTGGCAGTCACAAACTCGCAGAACCCCAAGTCTCT...CTTCCTCCAGAGATTTGGGAAGACATTAAAGGAGTTAGTGACGGTGGTACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR GCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCTCTCTATACTCGGCCTaGACCTTATCAGTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRSLYSA*TLSVSF
Trigger: AAAGCTTACTGATAAGGTGCAGGCCGAGTATAGAGA...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGCACTGTCAGATGTTTTaGGTCAACTCGGAATATAGC +
Preference number: 4 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWHCQMF*VNSEYS
Trigger: GCTATATTCCGAGTTGACCCAAAACATCTGACAGTG...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp GTGGTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGTGGCGTGTAAAGGTATaGGGCAAAGAATGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: VVRKPAGKINRIVRRMRKWRVKV*GKEWPV
Trigger: AACAGGCCATTCTTTGCCCCATACCTTTACACGCCA...CTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCTCTTCGGGGACCACCTaGTTTTCCACACTTCTCATT +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSSSGTT*FSTLLI
Trigger: AATGAGAAGTGTGGAAAACCAGGTGGTCCCCGAAGA...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp TCAATGCAGGATGAAGACAGGCACACCTCTAGCCTAAATGTATGTGGTCATTCTTCTAGGCCATTGTTCTaGTCTCTGGGCAAACTCGTT +
Preference number: 4 (lower is better)
Translates to: SMQDEDRHTSSLNVCGHSSRPLF*SLGKLV
Trigger: AACGAGTTTGCCCAGAGATCAGAACAATGGCCTAGA...AGAATGACCACATACATTTAGGCTAGAGGTGTGCCTGTCTTCATCCTGCATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR TCA 90 bp AATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATGGGCAGATACTAAGCACTGGAGTTTTCATTaGGAAAACGTGGGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: NCQENEKEALLGLWADTKHWSFH*ENVGLR
Trigger: CCGAAGACCCACGTTTTCTCAATGAAAACTCCAGTG...CTTAGTATCTGCCCATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTGGGGCAGTTCACTGTaGGAAGTGCGGCGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTWGSSL*EVRRAD
Trigger: ATCTGCTCGCCGCACTTCTCACAGTGAACTGCCCCA...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATTGGGGCAGTTCACTGTaGGAAGTGCGGCGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDWGSSL*EVRRAD
Trigger: ATCTGCTCGCCGCACTTCTCACAGTGAACTGCCCCA...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTGTGGCCTCTGCCCGCTaGCCAGATGATTGGGTAGAC +
Preference number: 4 (lower is better)
Translates to: KAMILIQNTGYPFARYSLVASAR*PDDWVD
Trigger: GTCTACCCAATCATCTGGGCAGCGGGCAGAGGCCAC...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp AAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCTATCTGCCAGGGCGCTaGTATACAAATCGTAACCAA +
Preference number: 4 (lower is better)
Translates to: KPAGKINRIVRRMRKKRCYLPGR*YTNRNQ
Trigger: TTGGTTACGATTTGTATAGCAGCGCCCTGGCAGATA...GCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCTATCTGCCAGGGCGCTaGTATACAAATCGTAACCAA +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSYLPGR*YTNRNQ
Trigger: TTGGTTACGATTTGTATAGCAGCGCCCTGGCAGATA...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CATTCTCCTAGCTCTGCTAAGAATAATAAAAGTGTCAAGGTCACACCAGCTCCGCTCACTGAGAATATCTaGCAGGGCGCTGCTATACAA +
Preference number: 4 (lower is better)
Translates to: HSPSSAKNNKSVKVTPAPLTENI*QGAAIQ
Trigger: TTGTATAGCAGCGCCCTGGCAGATATTCTCAGTGAG...CGGAGCTGGTGTGACCTTGACACTTTTATTATTCTTAGCAGAGCTAGGAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR GCA 90 bp AATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATGGGCAGATACTAAGCTCACTGAGAATATCTaGCAGGGCGCTGCTATACAA +
Preference number: 4 (lower is better)
Translates to: NCQENEKEALLGLWADTKLTENI*QGAAIQ
Trigger: TTGTATAGCAGCGCCCTGGCAGATATTCTCAGTGAG...CTTAGTATCTGCCCATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp TCAATGCAGGATGAAGACAGGCACACCTCTAGCCTAAATGTATGTGGTCATTCTAGATCAAAGGACATCTaGCTCGTGATGGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SMQDEDRHTSSLNVCGHSRSKDI*LVMVLC
Trigger: GCAGAGAACCATCACGAGGCAGATGTCCTTTGATCT...AGAATGACCACATACATTTAGGCTAGAGGTGTGCCTGTCTTCATCCTGCATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR GCA 90 bp AATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATGGGCAGATACTAAGAGATCAAAGGACATCTaGCTCGTGATGGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: NCQENEKEALLGLWADTKRSKDI*LVMVLC
Trigger: GCAGAGAACCATCACGAGGCAGATGTCCTTTGATCT...CTTAGTATCTGCCCATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp TCTAGTACCACCGTCACTAACTCCTTTAATGTCTTCCCAAATCTCTGGAGGAAGTGTGGCAGGGACGGATaGCTGTCTCTGTTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: SSTTVTNSFNVFPNLWRKCGRDG*LSLFVK
Trigger: TTTAACAAACAGAGACAGGCATCCGTCCCTGCCACA...CTTCCTCCAGAGATTTGGGAAGACATTAAAGGAGTTAGTGACGGTGGTACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR GCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCGACCTATGTAGTATGTaGTGTGTGGAGAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSDLCSM*CVEKIC
Trigger: GCAGATCTTCTCCACACAGCACATACTACATAGGTC...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCTTCGCTTGTGCGCCATaGTCTTCAGGTTTTCATTCT +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSFACAP*SSGFHS
Trigger: AGAATGAAAACCTGAAGAGCATGGCGCACAAGCGAA...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTAGTCAGGTTCACGTTTaGATTCCTTTTCAGAATCTC +
Preference number: 4 (lower is better)
Translates to: PWPRPLLWALLTHLIINFSQVHV*IPFQNL
Trigger: GAGATTCTGAAAAGGAATCCAAACGTGAACCTGACT...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCGTTAAAATGCTTTTCTaGTGGCTGCAGTCAATGTTG +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRVKMLF*WLQSML
Trigger: CAACATTGACTGCAGCCACCAGAAAAGCATTTTAAC...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCTCTCTCCCCCAACACTaGAGAGTCTATTGTAATCTG +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSSLPQH*RVYCNL
Trigger: CAGATTACAATAGACTCTCCAGTGTTGGGGGAGAGA...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCCGTCTCATGGTTTGTaGACTGATGTCACTGAACCA +
Preference number: 4 (lower is better)
Translates to: VRKPAGKINRIVRRMRKKPSHGL*TDVTEP
Trigger: TGGTTCAGTGACATCAGTCCACAAACCATGAGACGG...CTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCCATTGTTCTGATCTCTaGGCAAACTCGTTTTTACTG +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRHCSDL*ANSFLL
Trigger: CAGTAAAAACGAGTTTGCCCAGAGATCAGAACAATG...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp AAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCCATCTTCTAGTTTCTTaGGTAAGAAGGACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KPAGKINRIVRRMRKKRCHLLVS*VRRTSH
Trigger: GTGGGAAGTCCTTCTTACTCAAGAAACTAGAAGATG...GCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCGTCCCCATTTGTTGCTaGAGTTACAAGAAATTTTCT +
Preference number: 4 (lower is better)
Translates to: AQATALGSANSLNHQLLRVPICC*SYKKFS
Trigger: AGAAAATTTCTTGTAACTTCAGCAACAAATGGGGAC...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTAAGAACTGGAGTCCTTaGAGACAAAAACACTTCAAA +
Preference number: 4 (lower is better)
Translates to: TMAQATALGSANSLNHQLKNWSP*RQKHFK
Trigger: TTTGAAGTGTTTTTGTCTTCAAGGACTCCAGTTCTT...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCATGGTTGTGCAATACTaGGGCAGCATGCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTMVVQY*GSMPWS
Trigger: GGACCAGGGCATGCTGCCTCAGTATTGCACAACCAT...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCAATGGGGTCCAGGGGTaGGGCCTCATTAGTGGACAC +
Preference number: 4 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCNGVQG*GLISGH
Trigger: GTGTCCACTAATGAGGCCTCACCCCTGGACCCCATT...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGAATGGGGTCCAGGGGTaGGGCCTCATTAGTGGACAC +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPNGVQG*GLISGH
Trigger: GTGTCCACTAATGAGGCCTCACCCCTGGACCCCATT...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTGGACATCCGAGCTATaGCAGGATCTTGCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTWTSEL*QDLAGH
Trigger: GTGGCCTGCAAGATCCTGTCATAGCTCGGATGTCCA...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCGTATCAGGATTGCACTaGAGGATATCTCTCACCATT +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSVSGLH*RISLTI
Trigger: AATGGTGAGAGATATCCTGCAGTGCAATCCTGATAC...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCTTTCCGTATCAGGATTaGACTGCAGGATATCTCTCA +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSFPYQD*TAGYLS
Trigger: TGAGAGATATCCTGCAGTGCAATCCTGATACGGAAA...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTGCAGCACTTTATCTTaGTCACAGGCGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTCSTLS*SQASRP
Trigger: CGGCCTGGACGCCTGTGAGCAAGATAAAGTGCTGCA...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TCTAGTACCACCGTCACTAACTCCTTTAATGTCTTCCCAAATCTCTGGAGGAAGACAGTGTCCAGCATCTaGAGCACTTTATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SSTTVTNSFNVFPNLWRKTVSSI*STLSCS
Trigger: TGAGCAAGATAAAGTGCTGCAGATGCTGGACACTGT...CTTCCTCCAGAGATTTGGGAAGACATTAAAGGAGTTAGTGACGGTGGTACTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR GCA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCCTGGGAGTCATCCGCTaGCTCATTGTGGAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTLGVIR*LIVERV
Trigger: CACTCTCTCCACAATGAGGCAGCGGATGACTCCCAG...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATCTGGGAGTCATCCGCTaGCTCATTGTGGAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDLGVIR*LIVERV
Trigger: CACTCTCTCCACAATGAGGCAGCGGATGACTCCCAG...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CATTCTCCTAGCTCTGCTAAGAATAATAAAAGTGTCAAGGTCACACCAGCTCCGTGTTCAGAGTCACAGTaGTGGGTGTTCGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: HSPSSAKNNKSVKVTPAPCSESQ*WVFGLD
Trigger: ATCTAAACCGAACACCCAGCACTGTGACTCTGAACA...CGGAGCTGGTGTGACCTTGACACTTTTATTATTCTTAGCAGAGCTAGGAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR GCA 90 bp CATTCTCCTAGCTCTGCTAAGAATAATAAAAGTGTCAAGGTCACACCAGCTCCGTTCAGGTTTTCATTCTaGACAGCAGTTGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: HSPSSAKNNKSVKVTPAPFRFSF*TAVGLG
Trigger: TCCCAACCCAACTGCTGTGCAGAATGAAAACCTGAA...CGGAGCTGGTGTGACCTTGACACTTTTATTATTCTTAGCAGAGCTAGGAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR CCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCACGGTGCTCCAGATTaGCCCCACACTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSHGAPD*PHTSAA
Trigger: AGCTGCTGAAGTGTGGGGCCAATCTGGAGCACCGTG...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCATTCTGCACAGCAGTTaGGTTGGGACTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCILHSS*VGTGPR
Trigger: CCTGGGCCCAGTCCCAACCCAACTGCTGTGCAGAAT...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGTGCCCGCTGCCCAGATaGTTGGGTAGACACTGTACA +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPCPLPR*LGRHCT
Trigger: TGTACAGTGTCTACCCAATCATCTGGGCAGCGGGCA...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATGAATTAGCTCCTTCTTaGTCAACATCAGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: GKINRIVRRMRKKRCLVYELAPS*STSAPM
Trigger: CATGGGAGCTGATGTTGATCAAGAAGGAGCTAATTC...ATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp TCTAGTACCACCGTCACTAACTCCTTTAATGTCTTCCCAAATCTCTGGAGGAAGCATCTTCTAGTTTCTTaGGTAAGAAGGACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SSTTVTNSFNVFPNLWRKHLLVS*VRRTSH
Trigger: GTGGGAAGTCCTTCTTACTCAAGAAACTAGAAGATG...CTTCCTCCAGAGATTTGGGAAGACATTAAAGGAGTTAGTGACGGTGGTACTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR TCA 90 bp GTGGTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGACTTCAGGACTTTCATaGATCCTTCACTTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VVRKPAGKINRIVRRMRKTSGLS*ILHFSA
Trigger: AGCTGAAAAGTGAAGGATTCATGAAAGTCCTGAAGT...CTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCAGGACATCTGCCTCGTaGTGGTTCTCTGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFRTSAS*WFSASA
Trigger: GGCAGATGCAGAGAACCATCACGAGGCAGATGTCCT...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTAGGACATCTGCCTCGTaGTGGTTCTCTGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSRTSAS*WFSASA
Trigger: GGCAGATGCAGAGAACCATCACGAGGCAGATGTCCT...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCTCACCGAAACAATATTaGGTAACCGTCTCATGGTTT +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSSPKQY*VTVSWF
Trigger: AAACCATGAGACGGTTACTCAATATTGTTTCGGTGA...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTATGGTTGTGCAATACTaGGGCAGCATGCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSMVVQY*GSMPWS
Trigger: GGACCAGGGCATGCTGCCTCAGTATTGCACAACCAT...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTGGAGTCCTGGGAATTaGGACTCGAGAGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: KAMILIQNTGYPFARYSLWSPGN*DSRDLG
Trigger: CCCCAAGTCTCTCGAGTCTCAATTCCCAGGACTCCA...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CACATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGGTATTTTTGGAGAAGTaGTCGAACAATTTCAACATG +
Preference number: 4 (lower is better)
Translates to: HISSLARVMAVSSSPPYTVFLEK*SNNFNM
Trigger: CATGTTGAAATTGTTCGAGCACTTCTCCAAAAATAC...CGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp GTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGGTATCAGGATTGCACTaGAGGATATCTCTCACCATT +
Preference number: 4 (lower is better)
Translates to: VRKPAGKINRIVRRMRKKVSGLH*RISLTI
Trigger: AATGGTGAGAGATATCCTGCAGTGCAATCCTGATAC...CTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp AATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATGGGCAGATACTAAGTTTCCGTATCAGGATTaGACTGCAGGATATCTCTCA +
Preference number: 4 (lower is better)
Translates to: NCQENEKEALLGLWADTKFPYQD*TAGYLS
Trigger: TGAGAGATATCCTGCAGTGCAATCCTGATACGGAAA...CTTAGTATCTGCCCATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTACACAGATGGGTGGCTaGATGGTGGGCTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSTQMGG*MVGSLR
Trigger: TCTCAGTGAGCCCACCATGCAGCCACCCATCTGTGT...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATCCCACTTCCCCACTGTaGATACAAGCCCACACAGAT +
Preference number: 4 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDPTSPL*IQAHTD
Trigger: ATCTGTGTGGGCTTGTATGCACAGTGGGGAAGTGGG...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCGTACCCAATGTGCCTTaGCAGTCTGGTGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFVPNVP*QSGAES
Trigger: GCTCTCAGCACCAGACTGGCAAGGCACATTGGGTAC...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp GTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGGATCCAGGTTTACCGTaGATGGCAAAAAGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: VRKPAGKINRIVRRMRKKDPGLP*MAKRSL
Trigger: TAAAGACCTTTTTGCCATGCACGGTAAACCTGGATC...CTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCGGAGGAGCAGACAGATaGAGGCTGACTGTACCCAGA +
Preference number: 4 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFGGADR*RLTVPR
Trigger: TCTGGGTACAGTCAGCCTGCATCTGTCTGCTCCTCC...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTGGAGGAGCAGACAGATaGAGGCTGACTGTACCCAGA +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSGGADR*RLTVPR
Trigger: TCTGGGTACAGTCAGCCTGCATCTGTCTGCTCCTCC...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTACAACTCAGATTACTGTaGCGTGGGGCTCCCTCGTCT +
Preference number: 4 (lower is better)
Translates to: AMILIQNTGYPFARYSLLQLRLL*RGAPSS
Trigger: AGACGAGGGAGCCCCACGGCACAGTAATCTGAGTTG...TAAAAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCCAACTCAGATTACTGTaGCGTGGGGCTCCCTCGTCT +
Preference number: 4 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFQLRLL*RGAPSS
Trigger: AGACGAGGGAGCCCCACGGCACAGTAATCTGAGTTG...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000222013.2
ENSMUST00000222481.2
CDS-3UTR CCA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCAGTCAGGTTCACGTTTaGATTCCTTTTCAGAATCTC +
Preference number: 4 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSSQVHV*IPFQNL
Trigger: GAGATTCTGAAAAGGAATCCAAACGTGAACCTGACT...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp AAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCGTTAAAATGCTTTTCTaGTGGCTGCAGTCAATGTTG +
Preference number: 4 (lower is better)
Translates to: KPAGKINRIVRRMRKKRCVKMLF*WLQSML
Trigger: CAACATTGACTGCAGCCACCAGAAAAGCATTTTAAC...GCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp GGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATTCTCTCCCCCAACACTaGAGAGTCTATTGTAATCTG +
Preference number: 4 (lower is better)
Translates to: GKINRIVRRMRKKRCLVYSLPQH*RVYCNL
Trigger: CAGATTACAATAGACTCTCCAGTGTTGGGGGAGAGA...ATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCAGCTGTCGATGGTCTTaGCCATCCTGGCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCSCRWS*PSWPSA
Trigger: AGCTGATGGCCAGGATGGCCAAGACCATCGACAGCT...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GTGGTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGCATTGTTCTGATCTCTaGGCAAACTCGTTTTTACTG +
Preference number: 4 (lower is better)
Translates to: VVRKPAGKINRIVRRMRKHCSDL*ANSFLL
Trigger: CAGTAAAAACGAGTTTGCCCAGAGATCAGAACAATG...CTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGTTCGCCTTTTCCAGCTaGGAGTCATCCGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPFAFSS*ESSAAS
Trigger: TGAGGCAGCGGATGACTCCCAGCTGGAAAAGGCGAA...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCCTTGGGTTGGCACCATaGGAAAGAAGCAACTCCACA +
Preference number: 4 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTLGLAP*ERSNST
Trigger: TGTGGAGTTGCTTCTTTCTCATGGTGCCAACCCAAG...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTCACACATTCCAAATaGCCCTTTCGGGCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: KAMILIQNTGYPFARYSLFTHSK*PFRAAH
Trigger: GTGGGCTGCCCGAAAGGGTCATTTGGAATGTGTGAA...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGTTCACACATTCCAAATaGCCCTTTCGGGCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPFTHSK*PFRAAH
Trigger: GTGGGCTGCCCGAAAGGGTCATTTGGAATGTGTGAA...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGTCGTCTGATTCTGCGTaGAGCTGTCGATGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPSSDSA*SCRWSW
Trigger: CCAAGACCATCGACAGCTTCACGCAGAATCAGACGA...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCTCGTCTGATTCTGCGTaGAGCTGTCGATGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFSSDSA*SCRWSW
Trigger: CCAAGACCATCGACAGCTTCACGCAGAATCAGACGA...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp AAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCGTCCCCATTTGTTGCTaGAGTTACAAGAAATTTTCT +
Preference number: 4 (lower is better)
Translates to: KPAGKINRIVRRMRKKRCVPICC*SYKKFS
Trigger: AGAAAATTTCTTGTAACTTCAGCAACAAATGGGGAC...GCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp TCTAGTACCACCGTCACTAACTCCTTTAATGTCTTCCCAAATCTCTGGAGGAAGTCACCGAAACAATATTaGGTAACCGTCTCATGGTTT +
Preference number: 4 (lower is better)
Translates to: SSTTVTNSFNVFPNLWRKSPKQY*VTVSWF
Trigger: AAACCATGAGACGGTTACTCAATATTGTTTCGGTGA...CTTCCTCCAGAGATTTGGGAAGACATTAAAGGAGTTAGTGACGGTGGTACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR TCA 90 bp GTGGTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGAACTGGAGTCCTTaGAGACAAAAACACTTCAAA +
Preference number: 4 (lower is better)
Translates to: VVRKPAGKINRIVRRMRKKNWSP*RQKHFK
Trigger: TTTGAAGTGTTTTTGTCTTCAAGGACTCCAGTTCTT...CTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp GCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTACCCATTGAAAGATGCTaGGGAGGAGCAGACAGATGC +
Preference number: 4 (lower is better)
Translates to: AMILIQNTGYPFARYSLLPIERC*GGADRC
Trigger: GCATCTGTCTGCTCCTCCTCAGCATCTTTCAATGGG...TAAAAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCGTAGGGAGTCTCGCCTaGTTTGTTGGGCCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCVGSLA*FVGPVK
Trigger: CTTTACAGGCCCAACAAAGCAGGCGAGACTCCCTAC...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTGTAGGGAGTCTCGCCTaGTTTGTTGGGCCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: KAMILIQNTGYPFARYSLVGSLA*FVGPVK
Trigger: CTTTACAGGCCCAACAAAGCAGGCGAGACTCCCTAC...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTGTCAGCATCCTCCTaGACTCCTGTTGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSLSASS*TPVASE
Trigger: CTCAGAAGCAACAGGAGTGCAGGAGGATGCTGACAG...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTGTCCGGTATGGCCACTaGTCAGTAAGGTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSVRYGH*SVRLIQ
Trigger: CTGGATCAACCTTACTGAGCAGTGGCCATACCGGAC...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGTCTGAGGAGGCTGCATaGAGCTCAGACGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPSEEAA*SSDASF
Trigger: GAAAGATGCGTCTGAGCTGCATGCAGCCTCCTCAGA...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTAGCAGCTATCATCAGTaGCGTCTGGCCACACTCGTT +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSSSYHQ*RLATLV
Trigger: AACGAGTGTGGCCAGACGCCACTGATGATAGCTGCT...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGAGTCAGGTTCACGTTTaGATTCCTTTTCAGAATCTC +
Preference number: 4 (lower is better)
Translates to: VRKPAGKINRIVRRMRKKSQVHV*IPFQNL
Trigger: GAGATTCTGAAAAGGAATCCAAACGTGAACCTGACT...CTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CCA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCGCCTGCTTTGTTaGGCCTGTAAAGTAACCGTC +
Preference number: 4 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTSRLLC*ACKVTV
Trigger: GACGGTTACTTTACAGGCCCAACAAAGCAGGCGAGA...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCATGAGCCACGAGAACTaGAAAAGGGGCTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTMSHEN*KRGSIC
Trigger: GCAGATTGAGCCCCTTTTCCAGTTCTCGTGGCTCAT...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGTGGGAGAACTCTCATTaGACCTCACTCCCGAATCGG +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPWENSH*TSLPNR
Trigger: CCGATTCGGGAGTGAGGTCCAATGAGAGTTCTCCCA...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTTCCGCTGCCTCATTGTaGAGAGAGTGGTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSSAASL*REWLGE
Trigger: TTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGA...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGTCCGCTGCCTCATTGTaGAGAGAGTGGTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPSAASL*REWLGE
Trigger: TTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGA...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATTCTGATTGGCTCTGTTaGTGGGCGCAGTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDSDWLC*WAQCCC
Trigger: ACAACAACACTGCGCCCACCAACAGAGCCAATCAGA...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCCCCCTCTTTAGATGCTaGTATAAGCGCAGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTPLFRC*YKRSPV
Trigger: AACTGGACTGCGCTTATATCAGCATCTAAAGAGGGG...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTACTTGGGTTGGCACCATaGGAAAGAAGCAACTCCACA +
Preference number: 4 (lower is better)
Translates to: AMILIQNTGYPFARYSLLLGLAP*ERSNST
Trigger: TGTGGAGTTGCTTCTTTCTCATGGTGCCAACCCAAG...TAAAAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCCGAACAATTTCAACATaGCCACCTCTCACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCRTIST*PPLTAP
Trigger: TGGCGCTGTGAGAGGTGGTCATGTTGAAATTGTTCG...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGCGAACAATTTCAACATaGCCACCTCTCACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPRTIST*PPLTAP
Trigger: TGGCGCTGTGAGAGGTGGTCATGTTGAAATTGTTCG...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATGGTTTGTATCAACTGTaGAAGCAAACACCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDGLYQL*KQTPGR
Trigger: TCGGCCTGGTGTTTGCTTTCACAGTTGATACAAACC...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATTCACCGAAACAATATTaGGTAACCGTCTCATGGTTT +
Preference number: 4 (lower is better)
Translates to: GKINRIVRRMRKKRCLVYSPKQY*VTVSWF
Trigger: AAACCATGAGACGGTTACTCAATATTGTTTCGGTGA...ATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATCACTGGAGTTTTCATTaGGAAAACGTGGGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDHWSFH*ENVGLR
Trigger: CCGAAGACCCACGTTTTCTCAATGAAAACTCCAGTG...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATGGTTCTGCGAGTTTGTaGCTGCCAACTCAGATTACT +
Preference number: 4 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDGSASL*LPTQIT
Trigger: AGTAATCTGAGTTGGCAGTCACAAACTCGCAGAACC...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCATGAATGGAGCCCCCTaGAGAACTCTGACCTATGTA +
Preference number: 4 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTMNGAP*RTLTYV
Trigger: TACATAGGTCAGAGTTCTTCAGGGGGCTCCATTCAT...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATATCTCATCAAAGTTCTaGTTGGCTCTGTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDISSKF*LALLVG
Trigger: GCCCACCAACAGAGCCAATCAGAACTTTGATGAGAT...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTAAGAGAGTCCAGCACTTaGCACCATGTTCGACAGTTC +
Preference number: 4 (lower is better)
Translates to: AMILIQNTGYPFARYSLLRESST*HHVRQF
Trigger: GAACTGTCGAACATGGTGGCAAGTGCTGGACTCTCT...TAAAAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTAAGAGACTTGGGGTTCTaGGAGTTTGTGACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: AMILIQNTGYPFARYSLLRDLGF*EFVTAN
Trigger: GTTGGCAGTCACAAACTCGCAGAACCCCAAGTCTCT...TAAAAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCCTTAGCCACTCTCTCTaGTTTGCCTTCGGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTLSHSL*FAFGLF
Trigger: AAAAAGGCCGAAGGCAAAGCAGAGAGAGTGGCTAAG...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTCTCGCCTGCTTTGTTaGGCCTGTAAAGTAACCGTC +
Preference number: 4 (lower is better)
Translates to: KAMILIQNTGYPFARYSLSRLLC*ACKVTV
Trigger: GACGGTTACTTTACAGGCCCAACAAAGCAGGCGAGA...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATTGGCGTGTAAAGGTATaGGGCAAAGAATGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDWRVKV*GKEWPV
Trigger: AACAGGCCATTCTTTGCCCCATACCTTTACACGCCA...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTGATTGGCTCTGTTGGTaGGCGCAGTGTTGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSDWLCW*AQCCCS
Trigger: TGAACAACAACACTGCGCCCACCAACAGAGCCAATC...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGGATTGGCTCTGTTGGTaGGCGCAGTGTTGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPDWLCW*AQCCCS
Trigger: TGAACAACAACACTGCGCCCACCAACAGAGCCAATC...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGTCTGATTGGCTCTGTTaGTGGGCGCAGTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPSDWLC*WAQCCC
Trigger: ACAACAACACTGCGCCCACCAACAGAGCCAATCAGA...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTCATCAAAGTTCTGATTaGCTCTGTTGGTGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: KAMILIQNTGYPFARYSLHQSSD*LCWWAQ
Trigger: CTGCGCCCACCAACAGAGCCAATCAGAACTTTGATG...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCCTCGAACATCTGCAATaGTCTCCCGTAGTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFLEHLQ*SPVVWD
Trigger: ATCCCAAACTACGGGAGATCATTGCAGATGTTCGAG...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGCTCGAACATCTGCAATaGTCTCCCGTAGTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPLEHLQ*SPVVWD
Trigger: ATCCCAAACTACGGGAGATCATTGCAGATGTTCGAG...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCACTGGAGTTTTCATTaGGAAAACGTGGGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSHWSFH*ENVGLR
Trigger: CCGAAGACCCACGTTTTCTCAATGAAAACTCCAGTG...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCTCAGTTCTTCAAAGCTaGAGTTCAGGGTGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCSVLQS*SSGCRE
Trigger: CTCCCTACACCCTGAACTTCAGCTTTGAAGAACTGA...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCACTGCCACAATCAGTaGAGTCATCGAATTAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSHCHNQ*SHRISS
Trigger: GGAGCTAATTCGATGACTGCACTGATTGTGGCAGTG...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCCACTGCCACAATCAGTaGAGTCATCGAATTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFHCHNQ*SHRISS
Trigger: GGAGCTAATTCGATGACTGCACTGATTGTGGCAGTG...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCTGCTTTTCTGGTGGCTaGAGTCAATGTTGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFCFSGG*SQCCRE
Trigger: CTCCCTACAACATTGACTGCAGCCACCAGAAAAGCA...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTTGCTTTTCTGGTGGCTaGAGTCAATGTTGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSCFSGG*SQCCRE
Trigger: CTCCCTACAACATTGACTGCAGCCACCAGAAAAGCA...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTTCTGCATCTGCCTTCTaGGGTAAGTATCCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSSASAF*GKYPFC
Trigger: ACAGAAGGGATACTTACCGCAGAAGGCAGATGCAGA...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTTAGCCACTCTCTCTaGTTTGCCTTCGGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSLSHSL*FAFGLF
Trigger: AAAAAGGCCGAAGGCAAAGCAGAGAGAGTGGCTAAG...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTTCAGGTTTTCATTCTaGACAGCAGTTGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTFRFSF*TAVGLG
Trigger: TCCCAACCCAACTGCTGTGCAGAATGAAAACCTGAA...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGCAAACCAGTGACACTTaGGTTGGCACCATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPQTSDT*VGTMRK
Trigger: CTTTCTCATGGTGCCAACCCAAGTGTCACTGGTTTG...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCCCGTCTCATGGTTTGTaGACTGATGTCACTGAACCA +
Preference number: 4 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCPSHGL*TDVTEP
Trigger: TGGTTCAGTGACATCAGTCCACAAACCATGAGACGG...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGTGGCGTGTAAAGGTATaGGGCAAAGAATGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPWRVKV*GKEWPV
Trigger: AACAGGCCATTCTTTGCCCCATACCTTTACACGCCA...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTAGCTTCAAGTCTGTCTaGAAGAGACTAGGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: KAMILIQNTGYPFARYSLSFKSV*KRLGRS
Trigger: AGAACGGCCTAGTCTCTTCCAGACAGACTTGAAGCT...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCAGCTTCAAGTCTGTCTaGAAGAGACTAGGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCSFKSV*KRLGRS
Trigger: AGAACGGCCTAGTCTCTTCCAGACAGACTTGAAGCT...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCACTCATCTTCATCACTaGGCAGTTTCTGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCTHLHH*AVSGSA
Trigger: TGCGCTACCAGAAACTGCCCAGTGATGAAGATGAGT...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTACTCATCTTCATCACTaGGCAGTTTCTGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: KAMILIQNTGYPFARYSLTHLHH*AVSGSA
Trigger: TGCGCTACCAGAAACTGCCCAGTGATGAAGATGAGT...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTAGAATTAGCTCCTTCTTaGTCAACATCAGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: AMILIQNTGYPFARYSLLELAPS*STSAPM
Trigger: CATGGGAGCTGATGTTGATCAAGAAGGAGCTAATTC...TAAAAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATTCACTATTTCCACATTaGCCTGTTCAGCAGCTATCA +
Preference number: 4 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDSLFPH*PVQQLS
Trigger: TGATAGCTGCTGAACAGGGCAATGTGGAAATAGTGA...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATGTATCAGGATTGCACTaGAGGATATCTCTCACCATT +
Preference number: 4 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDVSGLH*RISLTI
Trigger: AATGGTGAGAGATATCCTGCAGTGCAATCCTGATAC...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCTATCTGCCAGGGCGCTaGTATACAAATCGTAACCAA +
Preference number: 4 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCYLPGR*YTNRNQ
Trigger: TTGGTTACGATTTGTATAGCAGCGCCCTGGCAGATA...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTACAACCCCACGATAGATaGAATGGATATGAGGATAGC +
Preference number: 4 (lower is better)
Translates to: AMILIQNTGYPFARYSLLQPHDR*NGYEDS
Trigger: GCTATCCTCATATCCATTGCATCTATCGTGGGGTTG...TAAAAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCACAGTGTCCAGCATCTaGAGCACTTTATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFTVSSI*STLSCS
Trigger: TGAGCAAGATAAAGTGCTGCAGATGCTGGACACTGT...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATCCGGCCATTTATGTTTaGCTTTTTGATGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDPAIYV*LFDGCA
Trigger: TGCACAACCATCAAAAAGGCAAACATAAATGGCCGG...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTAGACCTATGTAGTATGTaGTGTGTGGAGAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: AMILIQNTGYPFARYSLLDLCSM*CVEKIC
Trigger: GCAGATCTTCTCCACACAGCACATACTACATAGGTC...TAAAAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGTGTTCAGAGTCACAGTaGTGGGTGTTCGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPCSESQ*WVFGLD
Trigger: ATCTAAACCGAACACCCAGCACTGTGACTCTGAACA...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGGTAGTATGTGCTGTGTaGAGAAGATCTGCCGCTTAT +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPVVCAV*RRSAAY
Trigger: ATAAGCGGCAGATCTTCTCCACACAGCACATACTAC...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTACTTATCAGAGCAATTaGCTTTCGCACCATTCTGCA +
Preference number: 4 (lower is better)
Translates to: KAMILIQNTGYPFARYSLTYQSN*LSHHSA
Trigger: TGCAGAATGGTGCGAAAGTCAATTGCTCTGATAAGT...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCAATAAAAGGGCCCTTTaGAAACAGAACTCGGACAGT +
Preference number: 4 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFNKRAL*KQNSDS
Trigger: ACTGTCCGAGTTCTGTTTTCAAAGGGCCCTTTTATT...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR TCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGAATAAAAGGGCCCTTTaGAAACAGAACTCGGACAGT +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPNKRAL*KQNSDS
Trigger: ACTGTCCGAGTTCTGTTTTCAAAGGGCCCTTTTATT...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATTCTCATCTACATCTTTaGACTTCTCAAGAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDSHLHL*TSQEGL
Trigger: AAGCCCTTCTTGAGAAGTGCAAAGATGTAGATGAGA...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTTTTCCGTATCAGGATTaGACTGCAGGATATCTCTCA +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSFPYQD*TAGYLS
Trigger: TGAGAGATATCCTGCAGTGCAATCCTGATACGGAAA...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCCGGCCATTTATGTTTaGCTTTTTGATGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSPAIYV*LFDGCA
Trigger: TGCACAACCATCAAAAAGGCAAACATAAATGGCCGG...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCACTGTCAGATGTTTTaGGTCAACTCGGAATATAGC +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSHCQMF*VNSEYS
Trigger: GCTATATTCCGAGTTGACCCAAAACATCTGACAGTG...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
3UTR CAA 72 bp AAAAGTGTCAAGGTCACACCAGCTCCGCCTCTATTCTaGCTTTGTTGTATGCTTTCAAATTCCTTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: KSVKVTPAPPLF*LCCMLSNSFLK
Trigger: TTTTAAAAAGGAATTTGAAAGCATACAACAAAGCAAGAATAGAGGCGGAGCTGGTGTGACCTTGACACTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
3UTR CAA 72 bp AAACCAAACTGCCTCTCAAGTACCCATCACATGATATaGCATAATGTCAGTAACATCGTGCTGTTTTTAATG +
Preference number: 4 (lower is better)
Translates to: KPNCLSSTHHMI*HNVSNIVLFLM
Trigger: CATTAAAAACAGCACGATGTTACTGACATTATGCAATATCATGTGATGGGTACTTGAGAGGCAGTTTGGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR TCA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCACTTCAGGACTTTCATaGATCCTTCACTTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCTSGLS*ILHFSA
Trigger: AGCTGAAAAGTGAAGGATTCATGAAAGTCCTGAAGT...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTAACTTCAGGACTTTCATaGATCCTTCACTTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AMILIQNTGYPFARYSLLTSGLS*ILHFSA
Trigger: AGCTGAAAAGTGAAGGATTCATGAAAGTCCTGAAGT...TAAAAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATAAGAACTGGAGTCCTTaGAGACAAAAACACTTCAAA +
Preference number: 4 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDKNWSP*RQKHFK
Trigger: TTTGAAGTGTTTTTGTCTTCAAGGACTCCAGTTCTT...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR GCA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGTCTCATCTACATCTTTaGACTTCTCAAGAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPSHLHL*TSQEGL
Trigger: AAGCCCTTCTTGAGAAGTGCAAAGATGTAGATGAGA...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTGTTAAAATGCTTTTCTaGTGGCTGCAGTCAATGTTG +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSVKMLF*WLQSML
Trigger: CAACATTGACTGCAGCCACCAGAAAAGCATTTTAAC...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR TCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTGTCCCCATTTGTTGCTaGAGTTACAAGAAATTTTCT +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSVPICC*SYKKFS
Trigger: AGAAAATTTCTTGTAACTTCAGCAACAAATGGGGAC...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp GCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTATATTTCTCATCTTGGTaGCCTTTATTAGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: AMILIQNTGYPFARYSLLYFSSW*PLLVVS
Trigger: AGACACCACTAATAAAGGCCACCAAGATGAGAAATA...TAAAAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CCA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCTATTTCTCATCTTGGTaGCCTTTATTAGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFYFSSW*PLLVVS
Trigger: AGACACCACTAATAAAGGCCACCAAGATGAGAAATA...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR GCA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTGTATTTTTGGAGAAGTaGTCGAACAATTTCAACATG +
Preference number: 4 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSVFLEK*SNNFNM
Trigger: CATGTTGAAATTGTTCGAGCACTTCTCCAAAAATAC...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS TCA 90 bp TGCTGTGGGGCTGTGGGGACACAACGCCGCCTGGGAACGGCCCATTaGAAGATGCTGAGGAGGAGCAGACAGATGCAGGCTGACTGTACC +
Preference number: 5 (lower is better)
Translates to: CCGAVGTQRRLGTAH*KMLRRSRQMQADCT
Trigger: GGTACAGTCAGCCTGCATCTGTCTGCTCCTCCTCAGCATCTTTCAATGGGCCGTTCCCAGGCGGCGTTGTGTCCCCACAGCCCCACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 90 bp CTGTGGGGACACAACGCCGCCTGGGAACGGCCCATTGAAAGATGCTaGGGAGGAGCAGACAGATGCAGGCTGACTGTACCCAGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: LWGHNAAWERPIERC*GGADRCRLTVPRRR
Trigger: CCTCCTTCTGGGTACAGTCAGCCTGCATCTGTCTGCTCCTCCTCAGCATCTTTCAATGGGCCGTTCCCAGGCGGCGTTGTGTCCCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTTCACGGTGCTCCAGATaGGCCCCACACTTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSSRCSR*APHFSS
Trigger: GCTGCTGAAGTGTGGGGCCAATCTGGAGCACCGTGA...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS TCA 90 bp TGCTCACAGGCGTCCAGGCCGTCAATGATAACCACCAGCCTCGTCTaGTTCTGCGTGAAGCTGTCGATGGTCTTGGCCATCCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: CSQASRPSMITTSLV*FCVKLSMVLAILAI
Trigger: GATGGCCAGGATGGCCAAGACCATCGACAGCTTCACGCAGAATCAGACGAGGCTGGTGGTTATCATTGACGGCCTGGACGCCTGTGAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 90 bp AAAAGAAGTTCTGCCAGTCTCCGGCTCCTCCCTCGGATGGCAACGTaGAGGGGAGTGTCACCTTTCTTGTCCACAGCAGACACCCTAGCC +
Preference number: 5 (lower is better)
Translates to: KRSSASLRLLPRMAT*RGVSPFLSTADTLA
Trigger: GGCTAGGGTGTCTGCTGTGGACAAGAAAGGTGACACTCCCCTGCACGTTGCCATCCGAGGGAGGAGCCGGAGACTGGCAGAACTTCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 90 bp GAGCGCTGGCTTCGCTTGTGCGCCATGCTCTTCAGGTTTTCATTCTaGACAGCAGTTGGGTTGGGACTGGGCCCAGGCCTCAAAATGACC +
Preference number: 5 (lower is better)
Translates to: ERWLRLCAMLFRFSF*TAVGLGLGPGLKMT
Trigger: GGTCATTTTGAGGCCTGGGCCCAGTCCCAACCCAACTGCTGTGCAGAATGAAAACCTGAAGAGCATGGCGCACAAGCGAAGCCAGCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTTCATCCGCTGCCTCATaGTGGAGAGAGTGGTTGGGA +
Preference number: 5 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSSSAAS*WREWLG
Trigger: TCCCAACCACTCTCTCCACAATGAGGCAGCGGATGA...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS TCA 90 bp GTGGCATCCCTCGCTTCCCACTGTGGCCCTCATCTTCAAGCTCGATaGGATTCGCCTTTTCCAGCTGGGAGTCATCCGCTGCCTCATTGT +
Preference number: 5 (lower is better)
Translates to: VASLASHCGPHLQAR*DSPFPAGSHPLPHC
Trigger: ACAATGAGGCAGCGGATGACTCCCAGCTGGAAAAGGCGAATCTCATCGAGCTTGAAGATGAGGGCCACAGTGGGAAGCGAGGGATGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 90 bp TCGAGAGCCTGGTGTAACTGGAGCGCTGGCTTCGCTTGTGCGCCATaGTCTTCAGGTTTTCATTCTGCACAGCAGTTGGGTTGGGACTGG +
Preference number: 5 (lower is better)
Translates to: SRAWCNWSAGFACAP*SSGFHSAQQLGWDW
Trigger: CCAGTCCCAACCCAACTGCTGTGCAGAATGAAAACCTGAAGAGCATGGCGCACAAGCGAAGCCAGCGCTCCAGTTACACCAGGCTCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 90 bp GGTTCCGTAAAAGAAGTTCTGCCAGTCTCCGGCTCCTCCCTCGGATaGCAACGTGCAGGGGAGTGTCACCTTTCTTGTCCACAGCAGACA +
Preference number: 5 (lower is better)
Translates to: GSVKEVLPVSGSSLG*QRAGECHLSCPQQT
Trigger: TGTCTGCTGTGGACAAGAAAGGTGACACTCCCCTGCACGTTGCCATCCGAGGGAGGAGCCGGAGACTGGCAGAACTTCTTTTACGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CCA 90 bp TCTTGCAGGCCACTCAGACTGTGTGGCATCCCTCGCTTCCCACTGTaGCCCTCATCTTCAAGCTCGATGAGATTCGCCTTTTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SCRPLRLCGIPRFPL*PSSSSSMRFAFSSW
Trigger: CCAGCTGGAAAAGGCGAATCTCATCGAGCTTGAAGATGAGGGCCACAGTGGGAAGCGAGGGATGCCACACAGTCTGAGTGGCCTGCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 90 bp GGACATCCGAGCTATGACAGGATCTTGCAGGCCACTCAGACTGTGTaGCATCCCTCGCTTCCCACTGTGGCCCTCATCTTCAAGCTCGAT +
Preference number: 5 (lower is better)
Translates to: GHPSYDRILQATQTV*HPSLPTVALIFKLD
Trigger: ATCGAGCTTGAAGATGAGGGCCACAGTGGGAAGCGAGGGATGCCACACAGTCTGAGTGGCCTGCAAGATCCTGTCATAGCTCGGATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 90 bp TATCTGAGGAGGCTGCATGCAGCTCAGACGCATCTTTCGAGAGCCTaGTGTAACTGGAGCGCTGGCTTCGCTTGTGCGCCATGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: YLRRLHAAQTHLSRA*CNWSAGFACAPCSS
Trigger: TGAAGAGCATGGCGCACAAGCGAAGCCAGCGCTCCAGTTACACCAGGCTCTCGAAAGATGCGTCTGAGCTGCATGCAGCCTCCTCAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTGCACAGCAGTTGGGTaGGGACTGGGCCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: TMAQATALGSANSLNHQLCTAVG*GLGPGL
Trigger: GAGGCCTGGGCCCAGTCCCAACCCAACTGCTGTGCA...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS GCA 90 bp GCCCACACAGATGGGTGGCTGCATGGTGGGCTCACTGAGAATATCTaGCAGGGCGCTGCTATACAAATCGTAACCAAGCATGTCACCGTC +
Preference number: 5 (lower is better)
Translates to: AHTDGWLHGGLTENI*QGAAIQIVTKHVTV
Trigger: GACGGTGACATGCTTGGTTACGATTTGTATAGCAGCGCCCTGGCAGATATTCTCAGTGAGCCCACCATGCAGCCACCCATCTGTGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CCA 90 bp AAGATGCACTATGTCGGCGTGGCCTCTGCCCGCTGCCCAGATGATTaGGTAGACACTGTACAAACCAGTGACACTTGGGTTGGCACCATG +
Preference number: 5 (lower is better)
Translates to: KMHYVGVASARCPDD*VDTVQTSDTWVGTM
Trigger: CATGGTGCCAACCCAAGTGTCACTGGTTTGTACAGTGTCTACCCAATCATCTGGGCAGCGGGCAGAGGCCACGCCGACATAGTGCATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 90 bp GCCTTTTCCAGCTGGGAGTCATCCGCTGCCTCATTGTGGAGAGAGTaGTTGGGAGAACTCTCATTGGACCTCACTCCCGAATCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: AFSSWESSAASLWRE*LGELSLDLTPESEE
Trigger: TTCCTCCGATTCGGGAGTGAGGTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGATGACTCCCAGCTGGAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 90 bp TGGCTCTGTTGGTGGGCGCAGTGTTGTTGTTCAGAGTCACAGTGCTaGGTGTTCGGTTTAGATTGTAGGCCTTCTGGCACGAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: WLCWWAQCCCSESQC*VFGLDCRPSGTKAS
Trigger: GCTGGCCTTCGTGCCAGAAGGCCTACAATCTAAACCGAACACCCAGCACTGTGACTCTGAACAACAACACTGCGCCCACCAACAGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 90 bp AGGCTGCATGCAGCTCAGACGCATCTTTCGAGAGCCTGGTGTAACTaGAGCGCTGGCTTCGCTTGTGCGCCATGCTCTTCAGGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: RLHAAQTHLSRAWCN*SAGFACAPCSSGFH
Trigger: ATGAAAACCTGAAGAGCATGGCGCACAAGCGAAGCCAGCGCTCCAGTTACACCAGGCTCTCGAAAGATGCGTCTGAGCTGCATGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 90 bp ACACGATATCCACAGTCATTGAACTCAGTAACAGAGAGGTGCCTGTaGCAGGGACGGATGCCCTGTTGTAGAAAGGGTGCTGGGGTCCCG +
Preference number: 5 (lower is better)
Translates to: TRYPQSLNSVTERCL*QGRMPCCRKGAGVP
Trigger: CGGGACCCCAGCACCCTTTCTACAACAGGGCATCCGTCCCTGCCACAGGCACCTCTCTGTTACTGAGTTCAATGACTGTGGATATCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220459.2
CDS TCA 90 bp CAGAGGGGCTTTTCTTGTCTTCCGAGCAAATGGACATCCGAGCTATaGCAGGATCTTGCAGGCCACTCAGACTGTGTGGCATCCCTCGCT +
Preference number: 5 (lower is better)
Translates to: QRGFSCLPSKWTSEL*QDLAGHSDCVASLA
Trigger: AGCGAGGGATGCCACACAGTCTGAGTGGCCTGCAAGATCCTGTCATAGCTCGGATGTCCATTTGCTCGGAAGACAAGAAAAGCCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 90 bp ATTCTGCAGCAGAAGATGCACTATGTCGGCGTGGCCTCTGCCCGCTaGCCAGATGATTGGGTAGACACTGTACAAACCAGTGACACTTGG +
Preference number: 5 (lower is better)
Translates to: ILQQKMHYVGVASAR*PDDWVDTVQTSDTW
Trigger: CCAAGTGTCACTGGTTTGTACAGTGTCTACCCAATCATCTGGGCAGCGGGCAGAGGCCACGCCGACATAGTGCATCTTCTGCTGCAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 90 bp GATTGGCTCTGTTGGTGGGCGCAGTGTTGTTGTTCAGAGTCACAGTaGTGGGTGTTCGGTTTAGATTGTAGGCCTTCTGGCACGAAGGCC +
Preference number: 5 (lower is better)
Translates to: DWLCWWAQCCCSESQ*WVFGLDCRPSGTKA
Trigger: GGCCTTCGTGCCAGAAGGCCTACAATCTAAACCGAACACCCAGCACTGTGACTCTGAACAACAACACTGCGCCCACCAACAGAGCCAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 90 bp GAGTCTCGCCTGCTTTGTTGGGCCTGTAAAGTAACCGTCCATCTTTaGGGTTCCGTAAAAGAAGTTCTGCCAGTCTCCGGCTCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: ESRLLCWACKVTVHL*GSVKEVLPVSGSSL
Trigger: GAGGGAGGAGCCGGAGACTGGCAGAACTTCTTTTACGGAACCCCAAAGATGGACGGTTACTTTACAGGCCCAACAAAGCAGGCGAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CCA 90 bp GAGATGTTGGGAACCGCCAGGGTAATACCTTGGCGTGTAAAGGTATaGGGCAAAGAATGGCCTGTTGTAGAAAGGGTGCTGGGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: EMLGTARVIPWRVKV*GKEWPVVERVLGSR
Trigger: TCGGGACCCCAGCACCCTTTCTACAACAGGCCATTCTTTGCCCCATACCTTTACACGCCAAGGTATTACCCTGGCGGTTCCCAACATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CCA 90 bp GGCCGTTCTGAAGACTTCTTGCCTGGGAGCAGCTTACTACCTGACTaGTCGGATTTCTCATCTTCCTCAGTAATGGGGTCCAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: GRSEDFLPGSSLLPD*SDFSSSSVMGSRGE
Trigger: CTCACCCCTGGACCCCATTACTGAGGAAGATGAGAAATCCGACCAGTCAGGTAGTAAGCTGCTCCCAGGCAAGAAGTCTTCAGAACGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 90 bp CATCCGCTGCCTCATTGTGGAGAGAGTGGTTGGGAGAACTCTCATTaGACCTCACTCCCGAATCGGAGGAATCTTTCTTGTCGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: HPLPHCGESGWENSH*TSLPNRRNLSCRGG
Trigger: CCCTCCTCGACAAGAAAGATTCCTCCGATTCGGGAGTGAGGTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 90 bp CTGTGGCCCTCATCTTCAAGCTCGATGAGATTCGCCTTTTCCAGCTaGGAGTCATCCGCTGCCTCATTGTGGAGAGAGTGGTTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: LWPSSSSSMRFAFSS*ESSAASLWREWLGE
Trigger: TTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGATGACTCCCAGCTGGAAAAGGCGAATCTCATCGAGCTTGAAGATGAGGGCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS TCA 90 bp TTGTCGTTTGCTCTGGTAGTTCGGGTGGGTTCACAAACATCAGCTTaGAGAGGAGCTCCAGGTACCCAATGTGCCTTGCCAGTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: LSFALVVRVGSQTSA*RGAPGTQCALPVWC
Trigger: GCACCAGACTGGCAAGGCACATTGGGTACCTGGAGCTCCTCTTCAAGCTGATGTTTGTGAACCCACCCGAACTACCAGAGCAAACGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 90 bp AAACAGCCGGGTAGCCAGAAAGCCGAATTCTCTCTCACAAGCATCTaGGAGGGTCGCGATCATTTCAGCCAAGGAAGTCTCTCCCCCAAC +
Preference number: 5 (lower is better)
Translates to: KQPGSQKAEFSLTSI*EGRDHFSQGSLSPN
Trigger: GTTGGGGGAGAGACTTCCTTGGCTGAAATGATCGCGACCCTCTCAGATGCTTGTGAGAGAGAATTCGGCTTTCTGGCTACCCGGCTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 90 bp TACTTATCAGAGCAATTGACTTTCGCACCATTCTGCAGCAGAAGATaGACTATGTCGGCGTGGCCTCTGCCCGCTGCCCAGATGATTGGG +
Preference number: 5 (lower is better)
Translates to: YLSEQLTFAPFCSRR*TMSAWPLPAAQMIG
Trigger: CCCAATCATCTGGGCAGCGGGCAGAGGCCACGCCGACATAGTGCATCTTCTGCTGCAGAATGGTGCGAAAGTCAATTGCTCTGATAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 90 bp GAAAACAGAACTCGGACAGTGTCCAGCATCTGCAGCACTTTATCTTaGTCACAGGCGTCCAGGCCGTCAATGATAACCACCAGCCTCGTC +
Preference number: 5 (lower is better)
Translates to: ENRTRTVSSICSTLS*SQASRPSMITTSLV
Trigger: GACGAGGCTGGTGGTTATCATTGACGGCCTGGACGCCTGTGAGCAAGATAAAGTGCTGCAGATGCTGGACACTGTCCGAGTTCTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 90 bp GTCTCTCCCAGATATAGTATGAGCCAGGACGTCCGGTATGGCCACTaGTCAGTAAGGTTGATCCAGCTGGCTAGCCTGTCCCAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: VSPRYSMSQDVRYGH*SVRLIQLASLSQLK
Trigger: TTTCAACTGGGACAGGCTAGCCAGCTGGATCAACCTTACTGAGCAGTGGCCATACCGGACGTCCTGGCTCATACTATATCTGGGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 90 bp GCCTGTCTCTGTTTGTTAAACCCAGAGTCACACAGCTCCATCAGCTaGTTTCTTGTCCAGCTCTTCTCCCTCGAGGAGGCTGTGGGTGAA +
Preference number: 5 (lower is better)
Translates to: ACLCLLNPESHSSIS*FLVQLFSLEEAVGE
Trigger: TTCACCCACAGCCTCCTCGAGGGAGAAGAGCTGGACAAGAAAGCAGCTGATGGAGCTGTGTGACTCTGGGTTTAACAAACAGAGACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS CCA 90 bp TTTCCAGCTGGGAGTCATCCGCTGCCTCATTGTGGAGAGAGTGGTTaGGAGAACTCTCATTGGACCTCACTCCCGAATCGGAGGAATCTT +
Preference number: 5 (lower is better)
Translates to: FPAGSHPLPHCGESG*ENSHWTSLPNRRNL
Trigger: AAGATTCCTCCGATTCGGGAGTGAGGTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGATGACTCCCAGCTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 90 bp ATGAGATTCGCCTTTTCCAGCTGGGAGTCATCCGCTGCCTCATTGTaGAGAGAGTGGTTGGGAGAACTCTCATTGGACCTCACTCCCGAA +
Preference number: 5 (lower is better)
Translates to: MRFAFSSWESSAASL*REWLGELSLDLTPE
Trigger: TTCGGGAGTGAGGTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGATGACTCCCAGCTGGAAAAGGCGAATCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTCGAATTAGCTCCTTCTaGATCAACATCAGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSRISSF*INISSH
Trigger: ATGGGAGCTGATGTTGATCAAGAAGGAGCTAATTCG...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp GTTTTGAGGGCACAGGTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTTTCAGCTTATGTAATTaGGAGGCAGCACTATGGAGG +
Preference number: 5 (lower is better)
Translates to: VLRAQVGGVGSQGWVGKSFSLCN*EAALWR
Trigger: CCTCCATAGTGCTGCCTCCAAATTACATAAGCTGAA...ACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCACCTGTGCCCTCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGCCTGGGAACGGCCCATaGAAAGATGCTGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWPGNGP*KDAEEE
Trigger: CTCCTCCTCAGCATCTTTCAATGGGCCGTTCCCAGG...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACGCACTGGAGTTTTCATaGAGAAAACGTGGGTCTTCG +
Preference number: 5 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHALEFS*RKRGSS
Trigger: CGAAGACCCACGTTTTCTCAATGAAAACTCCAGTGC...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS GCA 90 bp TTCAAGCTCGATGAGATTCGCCTTTTCCAGCTGGGAGTCATCCGCTaGCTCATTGTGGAGAGAGTGGTTGGGAGAACTCTCATTGGACCT +
Preference number: 5 (lower is better)
Translates to: FKLDEIRLFQLGVIR*LIVERVVGRTLIGP
Trigger: AGGTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGATGACTCCCAGCTGGAAAAGGCGAATCTCATCGAGCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGCACTGCTCAGTAAGGTaGATCCAGCTGGCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWHCSVR*IQLASL
Trigger: CAGGCTAGCCAGCTGGATCAACCTTACTGAGCAGTG...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp CACATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGCGCCAGGGTAATACCTaGGCGTGTAAAGGTATGGGG +
Preference number: 5 (lower is better)
Translates to: HISSLARVMAVSSSPPYTRQGNT*ACKGMG
Trigger: CCCCATACCTTTACACGCCAAGGTATTACCCTGGCG...CGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCCGCCAGGGTAATACCTaGGCGTGTAAAGGTATGGGG +
Preference number: 5 (lower is better)
Translates to: AQATALGSANSLNHQLLRRQGNT*ACKGMG
Trigger: CCCCATACCTTTACACGCCAAGGTATTACCCTGGCG...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTGTGGGCGCAGTGTTGTaGTTCAGAGTCACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: TMAQATALGSANSLNHQLVGAVL*FRVTVL
Trigger: CAGCACTGTGACTCTGAACAACAACACTGCGCCCAC...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS GCA 90 bp TCCAGATTGGCCCCACACTTCAGCAGCTCTTCCACAATGTGGATGTaGCCCTCTTTAGATGCTGATATAAGCGCAGTCCAGTTATCCAGG +
Preference number: 5 (lower is better)
Translates to: SRLAPHFSSSSTMWM*PSLDADISAVQLSR
Trigger: CCTGGATAACTGGACTGCGCTTATATCAGCATCTAAAGAGGGGCACATCCACATTGTGGAAGAGCTGCTGAAGTGTGGGGCCAATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 90 bp CTCCTGTCAGGTATGTTCACGTATGTTCCGGCGTCCAACAGGTCCTaGACAATTTCTATATGTCCCTCCTTCGACGCAATCATCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LLSGMFTYVPASNRS*TISICPSFDAIIRA
Trigger: AGCCCTGATGATTGCGTCGAAGGAGGGACATATAGAAATTGTGCAGGACCTGTTGGACGCCGGAACATACGTGAACATACCTGACAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 90 bp TCTCACACACGATATCCACAGTCATTGAACTCAGTAACAGAGAGGTaGCTGTGGCAGGGACGGATGCTAGGCCATTGTTCTGATCTCTGG +
Preference number: 5 (lower is better)
Translates to: SHTRYPQSLNSVTER*LWQGRMLGHCSDLW
Trigger: CCAGAGATCAGAACAATGGCCTAGCATCCGTCCCTGCCACAGGCACCTCTCTGTTACTGAGTTCAATGACTGTGGATATCGTGTGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS CCA 90 bp ACACGATATCCACAGTCATTGAACTCAGTAACAGAGAGGTGCCTGTaGCAGGGACGGATGCTAGGCCATTGTTCTGATCTCTGGGCAAAC +
Preference number: 5 (lower is better)
Translates to: TRYPQSLNSVTERCL*QGRMLGHCSDLWAN
Trigger: GTTTGCCCAGAGATCAGAACAATGGCCTAGCATCCGTCCCTGCCACAGGCACCTCTCTGTTACTGAGTTCAATGACTGTGGATATCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTGGAGTGTCACCTTTCTaGTCCACAGCAGACACCCTA +
Preference number: 5 (lower is better)
Translates to: TMAQATALGSANSLNHQLGVSPF*STADTL
Trigger: TAGGGTGTCTGCTGTGGACAAGAAAGGTGACACTCC...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGGAGAGAGTCCAGCACTaGCCACCATGTTCGACAGTT +
Preference number: 5 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWERVQH*PPCSTV
Trigger: AACTGTCGAACATGGTGGCAAGTGCTGGACTCTCTC...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCGAGAGAGTCCAGCACTaGCCACCATGTTCGACAGTT +
Preference number: 5 (lower is better)
Translates to: AQATALGSANSLNHQLLRERVQH*PPCSTV
Trigger: AACTGTCGAACATGGTGGCAAGTGCTGGACTCTCTC...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp AAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCCTGCAGCACTTTATCTaGCTCACAGGCGTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: KPAGKINRIVRRMRKKRCLQHFI*LTGVQA
Trigger: GGCCTGGACGCCTGTGAGCAAGATAAAGTGCTGCAG...GCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCCCTCCTGCACTCCTGTaGCTTCTGAGCACGAAATGT +
Preference number: 5 (lower is better)
Translates to: AQATALGSANSLNHQLLRPPALL*LLSTKC
Trigger: ACATTTCGTGCTCAGAAGCAACAGGAGTGCAGGAGG...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTTGGGAGAACTCTCATaGGACCTCACTCCCGAATCG +
Preference number: 5 (lower is better)
Translates to: PWPRPLLWALLTHLIINFLGELS*DLTPES
Trigger: CGATTCGGGAGTGAGGTCCAATGAGAGTTCTCCCAA...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS TCA 90 bp GGGCAGCCCACACCAAAGGAGTTGTTCCATACTTATCAGAGCAATTaGCTTTCGCACCATTCTGCAGCAGAAGATGCACTATGTCGGCGT +
Preference number: 5 (lower is better)
Translates to: GQPTPKELFHTYQSN*LSHHSAAEDALCRR
Trigger: ACGCCGACATAGTGCATCTTCTGCTGCAGAATGGTGCGAAAGTCAATTGCTCTGATAAGTATGGAACAACTCCTTTGGTGTGGGCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS TCA 90 bp AACAGAGAGGTGCCTGTGGCAGGGACGGATGCTAGGCCATTGTTCTaGTCTCTGGGCAAACTCGTTTTTACTGATGAACGTGAGATGAGA +
Preference number: 5 (lower is better)
Translates to: NREVPVAGTDARPLF*SLGKLVFTDEREMR
Trigger: TCTCATCTCACGTTCATCAGTAAAAACGAGTTTGCCCAGAGATCAGAACAATGGCCTAGCATCCGTCCCTGCCACAGGCACCTCTCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS GCA 90 bp GGTGTCTCGCCATCCTTCGTGCATATTTCCGTATCAGGATTGCACTaGAGGATATCTCTCACCATTGTCGCATTGCCTTTCTCAACAGCC +
Preference number: 5 (lower is better)
Translates to: GVSPSFVHISVSGLH*RISLTIVALPFSTA
Trigger: GGCTGTTGAGAAAGGCAATGCGACAATGGTGAGAGATATCCTGCAGTGCAATCCTGATACGGAAATATGCACGAAGGATGGCGAGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 90 bp ATGTGCTGTGTGGAGAAGATCTGCCGCTTATTGTTGACGACCCTGTaGCCCCTTCTAACTGGGACATCTGAGCAATGTACTCTCTATAGG +
Preference number: 5 (lower is better)
Translates to: MCCVEKICRLLLTTL*PLLTGTSEQCTLYR
Trigger: CCTATAGAGAGTACATTGCTCAGATGTCCCAGTTAGAAGGGGGCACAGGGTCGTCAACAATAAGCGGCAGATCTTCTCCACACAGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 90 bp CTGAAGAACTCTGACCTATGTAGTATGTGCTGTGTGGAGAAGATCTaGCGCTTATTGTTGACGACCCTGTGCCCCCTTCTAACTGGGACA +
Preference number: 5 (lower is better)
Translates to: LKNSDLCSMCCVEKI*RLLLTTLCPLLTGT
Trigger: TGTCCCAGTTAGAAGGGGGCACAGGGTCGTCAACAATAAGCGGCAGATCTTCTCCACACAGCACATACTACATAGGTCAGAGTTCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 90 bp TCTGATAGGCTCGACGCTGTGCTCTGGAGACTTAGCCACTCTCTCTaGTTTGCCTTCGGCCTTTTTATCCTTATCATCTTTGAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SDRLDAVLWRLSHSL*FAFGLFILIIFEQW
Trigger: CCACTGCTCAAAGATGATAAGGATAAAAAGGCCGAAGGCAAAGCAGAGAGAGTGGCTAAGTCTCCAGAGCACAGCGTCGAGCCTATCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 90 bp TCTGGTGGCTGCAGTCAATGTTGTAGGGAGTCTCGCCTGCTTTGTTaGGCCTGTAAAGTAACCGTCCATCTTTGGGGTTCCGTAAAAGAA +
Preference number: 5 (lower is better)
Translates to: SGGCSQCCRESRLLC*ACKVTVHLWGSVKE
Trigger: TTCTTTTACGGAACCCCAAAGATGGACGGTTACTTTACAGGCCCAACAAAGCAGGCGAGACTCCCTACAACATTGACTGCAGCCACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTCCAGGTCTTCCAGGTaGCAGTTGGCTCCATTCTTA +
Preference number: 5 (lower is better)
Translates to: PWPRPLLWALLTHLIINFSRSSR*QLAPFL
Trigger: TAAGAATGGAGCCAACTGCAACCTGGAAGACCTGGA...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGCTCACCATTGTCGCATaGCCTTTCTCAACAGCCCAA +
Preference number: 5 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWLTIVA*PFSTAQ
Trigger: TTGGGCTGTTGAGAAAGGCAATGCGACAATGGTGAG...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp CACATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGCTGTTGAGGGCCGTTTaGCTACCAAGCTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: HISSLARVMAVSSSPPYTLLRAV*LPSFVI
Trigger: GATGACAAAGCTTGGTAGCAAAACGGCCCTCAACAG...CGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTGCAAGGCCTCCTATGTaGATCTGTTCTCTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PWPRPLLWALLTHLIINFARPPM*ICSLAA
Trigger: AGCTGCAAGAGAACAGATCAACATAGGAGGCCTTGC...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTCAGCAGCATCCTCCTaGATTACCTCTAGGCCATTG +
Preference number: 5 (lower is better)
Translates to: PWPRPLLWALLTHLIINFSAASS*ITSRPL
Trigger: CAATGGCCTAGAGGTAATCAAGGAGGATGCTGCTGA...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR CAA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCCCATCAGCTGCTTTCTaGTCCAGCTCTTCTCCCTCG +
Preference number: 5 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSPSAAF*SSSSPS
Trigger: CGAGGGAGAAGAGCTGGACAAGAAAGCAGCTGATGG...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS TCA 90 bp CTTCAGCAGCTCTTCCACAATGTGGATGTGCCCCTCTTTAGATGCTaGTATAAGCGCAGTCCAGTTATCCAGGTCTTCCAGGTTGCAGTT +
Preference number: 5 (lower is better)
Translates to: LQQLFHNVDVPLFRC*YKRSPVIQVFQVAV
Trigger: AACTGCAACCTGGAAGACCTGGATAACTGGACTGCGCTTATATCAGCATCTAAAGAGGGGCACATCCACATTGTGGAAGAGCTGCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS TCA 90 bp ATGACCTGGGATGTTTCCCTGACTCCCTCTATCTCATCAAAGTTCTaGTTGGCTCTGTTGGTGGGCGCAGTGTTGTTGTTCAGAGTCACA +
Preference number: 5 (lower is better)
Translates to: MTWDVSLTPSISSKF*LALLVGAVLLFRVT
Trigger: TGTGACTCTGAACAACAACACTGCGCCCACCAACAGAGCCAATCAGAACTTTGATGAGATAGAGGGAGTCAGGGAAACATCCCAGGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 90 bp CCGTATCAGGATTGCACTGCAGGATATCTCTCACCATTGTCGCATTaGCTTTCTCAACAGCCCAATACAGTGCAGTCTTATTGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: PYQDCTAGYLSPLSH*LSQQPNTVQSYCPA
Trigger: GGCAGGACAATAAGACTGCACTGTATTGGGCTGTTGAGAAAGGCAATGCGACAATGGTGAGAGATATCCTGCAGTGCAATCCTGATACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 90 bp GGAGGAATCTTTCTTGTCGAGGAGGGCGTCCGACAAATACTCTTTTaGTTTGATGAATGTTCTGATAGGCTCGACGCTGTGCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: GGIFLVEEGVRQILF*FDECSDRLDAVLWR
Trigger: TCTCCAGAGCACAGCGTCGAGCCTATCAGAACATTCATCAAAGCAAAAGAGTATTTGTCGGACGCCCTCCTCGACAAGAAAGATTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCCCCACACCAAAGGAGTaGTTCCATACTTATCAGAGC +
Preference number: 5 (lower is better)
Translates to: AQATALGSANSLNHQLLRPTPKE*FHTYQS
Trigger: GCTCTGATAAGTATGGAACAACTCCTTTGGTGTGGG...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp GTGGGTGGTGTCGGAAGCCAGGGCTGGGTTGGAAAGAGTATCCCAGGAATACACTATATCAGCGTATTTTaGGAGAAGTGCTCGAACAAT +
Preference number: 5 (lower is better)
Translates to: VGGVGSQGWVGKSIPGIHYISVF*EKCSNN
Trigger: ATTGTTCGAGCACTTCTCCAAAAATACGCTGATATA...GTGTATTCCTGGGATACTCTTTCCAACCCAGCCCTGGCTTCCGACACCACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCGGAGTGTCACCTTTCTaGTCCACAGCAGACACCCTA +
Preference number: 5 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSGVSPF*STADTL
Trigger: TAGGGTGTCTGCTGTGGACAAGAAAGGTGACACTCC...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTTTGCTACCAAGCTTaGTCATCTCCCCAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: TMAQATALGSANSLNHQLFCYQA*SSPQGC
Trigger: ACAGCCTTGGGGAGATGACAAAGCTTGGTAGCAAAA...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp TCAATGCAGGATGAAGACAGGCACACCTCTAGCCTAAATGTATGTGGTCATTCTCACTGCTCAGTAAGGTaGATCCAGCTGGCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: SMQDEDRHTSSLNVCGHSHCSVR*IQLASL
Trigger: CAGGCTAGCCAGCTGGATCAACCTTACTGAGCAGTG...AGAATGACCACATACATTTAGGCTAGAGGTGTGCCTGTCTTCATCCTGCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR CAA 90 bp CATTCTCCTAGCTCTGCTAAGAATAATAAAAGTGTCAAGGTCACACCAGCTCCGCGCCAGGGTAATACCTaGGCGTGTAAAGGTATGGGG +
Preference number: 5 (lower is better)
Translates to: HSPSSAKNNKSVKVTPAPRQGNT*ACKGMG
Trigger: CCCCATACCTTTACACGCCAAGGTATTACCCTGGCG...CGGAGCTGGTGTGACCTTGACACTTTTATTATTCTTAGCAGAGCTAGGAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR CAA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATTGCACAGCAGTTGGGTaGGGACTGGGCCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDCTAVG*GLGPGL
Trigger: GAGGCCTGGGCCCAGTCCCAACCCAACTGCTGTGCA...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS TCA 90 bp TTCAGCTTATGTAATTTGGAGGCAGCACTATGGAGGCGTTTTCTCTaGGAATTCAGGAGAGAGTCCAGCACTTGCCACCATGTTCGACAG +
Preference number: 5 (lower is better)
Translates to: FSLCNLEAALWRRFL*EFRRESSTCHHVRQ
Trigger: CTGTCGAACATGGTGGCAAGTGCTGGACTCTCTCCTGAATTCTCAGAGAAAACGCCTCCATAGTGCTGCCTCCAAATTACATAAGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 90 bp GTAAGGTTGATCCAGCTGGCTAGCCTGTCCCAGTTGAAAGTAATCTaGTTGGCTCTTAGTAGCCGCCCTGTCACCGAAACAATATTGAGT +
Preference number: 5 (lower is better)
Translates to: VRLIQLASLSQLKVI*LALSSRPVTETILS
Trigger: ACTCAATATTGTTTCGGTGACAGGGCGGCTACTAAGAGCCAATCAGATTACTTTCAACTGGGACAGGCTAGCCAGCTGGATCAACCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 90 bp CCACCATGTTCGACAGTTCAGCACAAAGGCCAACCCCACGATAGATaGAATGGATATGAGGATAGCATTCACTGTCAGATGTTTTGGGTC +
Preference number: 5 (lower is better)
Translates to: PPCSTVQHKGQPHDR*NGYEDSIHCQMFWV
Trigger: GACCCAAAACATCTGACAGTGAATGCTATCCTCATATCCATTGCATCTATCGTGGGGTTGGCCTTTGTGCTGAACTGTCGAACATGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTCTTCCAGGTTGCAGTaGGCTCCATTCTTAATGAGT +
Preference number: 5 (lower is better)
Translates to: PWPRPLLWALLTHLIINFSSRLQ*APFLMS
Trigger: ACTCATTAAGAATGGAGCCAACTGCAACCTGGAAGA...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCTCCAGGTCTTCCAGGTaGCAGTTGGCTCCATTCTTA +
Preference number: 5 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSSRSSR*QLAPFL
Trigger: TAAGAATGGAGCCAACTGCAACCTGGAAGACCTGGA...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CACATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGCGAATTAGCTCCTTCTaGATCAACATCAGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: HISSLARVMAVSSSPPYTRISSF*INISSH
Trigger: ATGGGAGCTGATGTTGATCAAGAAGGAGCTAATTCG...CGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp CACATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTTCAGCTTATGTAATTaGGAGGCAGCACTATGGAGG +
Preference number: 5 (lower is better)
Translates to: HISSLARVMAVSSSPPYTFSLCN*EAALWR
Trigger: CCTCCATAGTGCTGCCTCCAAATTACATAAGCTGAA...CGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp GCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACGCTTCAGCTTATGTAATTaGGAGGCAGCACTATGGAGG +
Preference number: 5 (lower is better)
Translates to: AQATALGSANSLNHQLLRFSLCN*EAALWR
Trigger: CCTCCATAGTGCTGCCTCCAAATTACATAAGCTGAA...GCGTAAAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp TCAATGCAGGATGAAGACAGGCACACCTCTAGCCTAAATGTATGTGGTCATTCTCCTCCTGCACTCCTGTaGCTTCTGAGCACGAAATGT +
Preference number: 5 (lower is better)
Translates to: SMQDEDRHTSSLNVCGHSPPALL*LLSTKC
Trigger: ACATTTCGTGCTCAGAAGCAACAGGAGTGCAGGAGG...AGAATGACCACATACATTTAGGCTAGAGGTGTGCCTGTCTTCATCCTGCATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR CAA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCCTGTTGAGGGCCGTTTaGCTACCAAGCTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSLLRAV*LPSFVI
Trigger: GATGACAAAGCTTGGTAGCAAAACGGCCCTCAACAG...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCGCAAGGCCTCCTATGTaGATCTGTTCTCTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSARPPM*ICSLAA
Trigger: AGCTGCAAGAGAACAGATCAACATAGGAGGCCTTGC...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CATTCTCCTAGCTCTGCTAAGAATAATAAAAGTGTCAAGGTCACACCAGCTCCGGCCACTCTCTCTGCTTaGCCTTCGGCCTTTTTATCC +
Preference number: 5 (lower is better)
Translates to: HSPSSAKNNKSVKVTPAPATLSA*PSAFLS
Trigger: GGATAAAAAGGCCGAAGGCAAAGCAGAGAGAGTGGC...CGGAGCTGGTGTGACCTTGACACTTTTATTATTCTTAGCAGAGCTAGGAGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS TCA 90 bp ATCAGTCAGGTTCACGTTTGGATTCCTTTTCAGAATCTCCTTCACTaGCTGTGTGTAGCCCCCTTTCACTGCCACAATCAGTGCAGTCAT +
Preference number: 5 (lower is better)
Translates to: ISQVHVWIPFQNLLH*LCVAPFHCHNQCSH
Trigger: ATGACTGCACTGATTGTGGCAGTGAAAGGGGGCTACACACAGTCAGTGAAGGAGATTCTGAAAAGGAATCCAAACGTGAACCTGACTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 90 bp CAATCTGCTGCCCTGCAAACGTCTTCATTTCATCTTCTAGTTTCTTaGGTAAGAAGGACTTCCCACTTCCCCACTGTGCATACAAGCCCA +
Preference number: 5 (lower is better)
Translates to: QSAALQTSSFHLLVS*VRRTSHFPTVHTSP
Trigger: TGGGCTTGTATGCACAGTGGGGAAGTGGGAAGTCCTTCTTACTCAAGAAACTAGAAGATGAAATGAAGACGTTTGCAGGGCAGCAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 90 bp TGTTCTGATCTCTGGGCAAACTCGTTTTTACTGATGAACGTGAGATaGGATGTTGGGAACCGCCAGGGTAATACCTTGGCGTGTAAAGGT +
Preference number: 5 (lower is better)
Translates to: CSDLWANSFLLMNVR*DVGNRQGNTLACKG
Trigger: ACCTTTACACGCCAAGGTATTACCCTGGCGGTTCCCAACATCTCATCTCACGTTCATCAGTAAAAACGAGTTTGCCCAGAGATCAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 90 bp TTAGTGGTGTCTCGCCATCCTTCGTGCATATTTCCGTATCAGGATTaGACTGCAGGATATCTCTCACCATTGTCGCATTGCCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: LVVSRHPSCIFPYQD*TAGYLSPLSHCLSQ
Trigger: TTGAGAAAGGCAATGCGACAATGGTGAGAGATATCCTGCAGTGCAATCCTGATACGGAAATATGCACGAAGGATGGCGAGACACCACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 90 bp AGTGTCTGGCTCCAAATATTTGAGTTAAAATGCTTTTCTGGTGGCTaGAGTCAATGTTGTAGGGAGTCTCGCCTGCTTTGTTGGGCCTGT +
Preference number: 5 (lower is better)
Translates to: SVWLQIFELKCFSGG*SQCCRESRLLCWAC
Trigger: ACAGGCCCAACAAAGCAGGCGAGACTCCCTACAACATTGACTGCAGCCACCAGAAAAGCATTTTAACTCAAATATTTGGAGCCAGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 90 bp ATGAGGAACACGATGAGCCACGAGAACTGGAAAAGGGGCTCAATCTaGTGCCCTGCAAACGTCTTCATTTCATCTTCTAGTTTCTTGAGT +
Preference number: 5 (lower is better)
Translates to: MRNTMSHENWKRGSI*CPANVFISSSSFLS
Trigger: ACTCAAGAAACTAGAAGATGAAATGAAGACGTTTGCAGGGCAGCAGATTGAGCCCCTTTTCCAGTTCTCGTGGCTCATCGTGTTCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 90 bp AAATACTCTTTTGCTTTGATGAATGTTCTGATAGGCTCGACGCTGTaGTCTGGAGACTTAGCCACTCTCTCTGCTTTGCCTTCGGCCTTT +
Preference number: 5 (lower is better)
Translates to: KYSFALMNVLIGSTL*SGDLATLSALPSAF
Trigger: AAAGGCCGAAGGCAAAGCAGAGAGAGTGGCTAAGTCTCCAGAGCACAGCGTCGAGCCTATCAGAACATTCATCAAAGCAAAAGAGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp ACCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTACTTATCAGAGCAATaGACTTTCGCACCATTCTGC +
Preference number: 5 (lower is better)
Translates to: TMAQATALGSANSLNHQLYLSEQ*TFAPFC
Trigger: GCAGAATGGTGCGAAAGTCAATTGCTCTGATAAGTA...AAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTACTTATCAGAGCAATaGACTTTCGCACCATTCTGC +
Preference number: 5 (lower is better)
Translates to: PWPRPLLWALLTHLIINFYLSEQ*TFAPFC
Trigger: GCAGAATGGTGCGAAAGTCAATTGCTCTGATAAGTA...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp GTGGTGAGGAAGCCAGCTGGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGGCACTGGAGTTTTCATaGAGAAAACGTGGGTCTTCG +
Preference number: 5 (lower is better)
Translates to: VVRKPAGKINRIVRRMRKALEFS*RKRGSS
Trigger: CGAAGACCCACGTTTTCTCAATGAAAACTCCAGTGC...CTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCCAGCTGGCTTCCTCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTTCACGGTGCTCCAGATaGGCCCCACACTTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSSRCSR*APHFSS
Trigger: GCTGCTGAAGTGTGGGGCCAATCTGGAGCACCGTGA...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTTCATCTTCTAGTTTCTaGAGTAAGAAGGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: PWPRPLLWALLTHLIINFSSSSF*SKKDFP
Trigger: TGGGAAGTCCTTCTTACTCAAGAAACTAGAAGATGA...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTACGAAATGTCCCCATTaGTTGCTGAAGTTACAAGAA +
Preference number: 5 (lower is better)
Translates to: PWPRPLLWALLTHLIINFTKCPH*LLKLQE
Trigger: TTCTTGTAACTTCAGCAACAAATGGGGACATTTCGT...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CACATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGACGAAATGTCCCCATTaGTTGCTGAAGTTACAAGAA +
Preference number: 5 (lower is better)
Translates to: HISSLARVMAVSSSPPYTTKCPH*LLKLQE
Trigger: TTCTTGTAACTTCAGCAACAAATGGGGACATTTCGT...CGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp TCAATGCAGGATGAAGACAGGCACACCTCTAGCCTAAATGTATGTGGTCATTCTTTTTGCTACCAAGCTTaGTCATCTCCCCAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: SMQDEDRHTSSLNVCGHSFCYQA*SSPQGC
Trigger: ACAGCCTTGGGGAGATGACAAAGCTTGGTAGCAAAA...AGAATGACCACATACATTTAGGCTAGAGGTGTGCCTGTCTTCATCCTGCATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR CAA 90 bp AATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATGGGCAGATACTAAGTTTTGCTACCAAGCTTaGTCATCTCCCCAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: NCQENEKEALLGLWADTKFCYQA*SSPQGC
Trigger: ACAGCCTTGGGGAGATGACAAAGCTTGGTAGCAAAA...CTTAGTATCTGCCCATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp CACATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGCAAGAACTGGAGTCCTaGAAGACAAAAACACTTCAA +
Preference number: 5 (lower is better)
Translates to: HISSLARVMAVSSSPPYTQELES*KTKTLQ
Trigger: TTGAAGTGTTTTTGTCTTCAAGGACTCCAGTTCTTG...CGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTCAAGAACTGGAGTCCTaGAAGACAAAAACACTTCAA +
Preference number: 5 (lower is better)
Translates to: PWPRPLLWALLTHLIINFQELES*KTKTLQ
Trigger: TTGAAGTGTTTTTGTCTTCAAGGACTCCAGTTCTTG...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATCCTGGGAACGGCCCATaGAAAGATGCTGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDPGNGP*KDAEEE
Trigger: CTCCTCCTCAGCATCTTTCAATGGGCCGTTCCCAGG...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCCCTGGGAACGGCCCATaGAAAGATGCTGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTPGNGP*KDAEEE
Trigger: CTCCTCCTCAGCATCTTTCAATGGGCCGTTCCCAGG...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS TCA 90 bp TCTATATCAGCGTATTTTTGGAGAAGTGCTCGAACAATTTCAACATaGCCACCTCTCACAGCGCCAATCAATACAGTATCCCCACTCCTG +
Preference number: 5 (lower is better)
Translates to: SISAYFWRSARTIST*PPLTAPINTVSPLL
Trigger: CAGGAGTGGGGATACTGTATTGATTGGCGCTGTGAGAGGTGGTCATGTTGAAATTGTTCGAGCACTTCTCCAAAAATACGCTGATATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp ATTTCTTCTCTGGCTAGAGTGATGGCCGTGTCTTCTTCACCCCCTTATACGTGGTATATCAGCGTATTTTaGGAGAAGTGCTCGAACAAT +
Preference number: 5 (lower is better)
Translates to: ISSLARVMAVSSSPPYTWYISVF*EKCSNN
Trigger: ATTGTTCGAGCACTTCTCCAAAAATACGCTGATATA...CCACGTATAAGGGGGTGAAGAAGACACGGCCATCACTCTAGCCAGAGAAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp TCAATGCAGGATGAAGACAGGCACACCTCTAGCCTAAATGTATGTGGTCATTCTGGATATCTCTCACCATaGTCGCATTGCCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: SMQDEDRHTSSLNVCGHSGYLSP*SHCLSQ
Trigger: TTGAGAAAGGCAATGCGACAATGGTGAGAGATATCC...AGAATGACCACATACATTTAGGCTAGAGGTGTGCCTGTCTTCATCCTGCATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR CAA 90 bp AATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATGGGCAGATACTAAGGGATATCTCTCACCATaGTCGCATTGCCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: NCQENEKEALLGLWADTKGYLSP*SHCLSQ
Trigger: TTGAGAAAGGCAATGCGACAATGGTGAGAGATATCC...CTTAGTATCTGCCCATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTGCAGCACTTTATCTaGCTCACAGGCGTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSLQHFI*LTGVQA
Trigger: GGCCTGGACGCCTGTGAGCAAGATAAAGTGCTGCAG...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCCTGCAGCACTTTATCTaGCTCACAGGCGTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCLQHFI*LTGVQA
Trigger: GGCCTGGACGCCTGTGAGCAAGATAAAGTGCTGCAG...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CCATGGCCCAGGCCACTGCTTTGGGCTCTGCTAACTCACTTAATCATCAACTTTAGAAATTTTCTTGCATaGCTAAGCCCACGACTATTA +
Preference number: 5 (lower is better)
Translates to: PWPRPLLWALLTHLIINFRNFLA*LSPRLL
Trigger: TAATAGTCGTGGGCTTAGCAATGCAAGAAAATTTCT...AAAGTTGATGATTAAGTGAGTTAGCAGAGCCCAAAGCAGTGGCCTGGGCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATCACTGCTCAGTAAGGTaGATCCAGCTGGCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDHCSVR*IQLASL
Trigger: CAGGCTAGCCAGCTGGATCAACCTTACTGAGCAGTG...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCATCCGCTGCCTCATaGTGGAGAGAGTGGTTGGGA +
Preference number: 5 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTSSAAS*WREWLG
Trigger: TCCCAACCACTCTCTCCACAATGAGGCAGCGGATGA...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS TCA 90 bp TCTATAGGCATCTCTATACTCGGCCTGCACCTTATCAGTAAGCTTTaGAATTTCAATACTGGAGTCCTGGGAATTGAGACTCGAGAGACT +
Preference number: 5 (lower is better)
Translates to: SIGISILGLHLISKL*NFNTGVLGIETRET
Trigger: AGTCTCTCGAGTCTCAATTCCCAGGACTCCAGTATTGAAATTTCAAAGCTTACTGATAAGGTGCAGGCCGAGTATAGAGATGCCTATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 90 bp ATTGTCCTGCCCTCTAATGTCTATATCAGCGTATTTTTGGAGAAGTaGTCGAACAATTTCAACATGACCACCTCTCACAGCGCCAATCAA +
Preference number: 5 (lower is better)
Translates to: IVLPSNVYISVFLEK*SNNFNMTTSHSANQ
Trigger: TTGATTGGCGCTGTGAGAGGTGGTCATGTTGAAATTGTTCGAGCACTTCTCCAAAAATACGCTGATATAGACATTAGAGGGCAGGACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCGAGAGAGTCCAGCACTaGCCACCATGTTCGACAGTT +
Preference number: 5 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTERVQH*PPCSTV
Trigger: AACTGTCGAACATGGTGGCAAGTGCTGGACTCTCTC...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp TGTGAGGTCCTGCGTTTCATCACCAGTACCACTAACTTTTCTTTAGCCATGAGCACGAAATGTCCCCATTaGTTGCTGAAGTTACAAGAA +
Preference number: 5 (lower is better)
Translates to: CEVLRFITSTTNFSLAMSTKCPH*LLKLQE
Trigger: TTCTTGTAACTTCAGCAACAAATGGGGACATTTCGT...GCTCATGGCTAAAGAAAAGTTAGTGGTACTGGTGATGAAACGCAGGACCTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATGCCACTCTCTCTGCTTaGCCTTCGGCCTTTTTATCC +
Preference number: 5 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDATLSA*PSAFLS
Trigger: GGATAAAAAGGCCGAAGGCAAAGCAGAGAGAGTGGC...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCAGCTATGACAGGATCTaGCAGGCCACTCAGACTGTG +
Preference number: 5 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTSYDRI*QATQTV
Trigger: CACAGTCTGAGTGGCCTGCAAGATCCTGTCATAGCT...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS CCA 90 bp TTTTCTTCCTTATCAGTAAGCTTTGAAATTTCAATACTGGAGTCCTaGGAATTGAGACTCGAGAGACTTGGGGTTCTGCGAGTTTGTGAC +
Preference number: 5 (lower is better)
Translates to: FSSLSVSFEISILES*ELRLERLGVLRVCD
Trigger: GTCACAAACTCGCAGAACCCCAAGTCTCTCGAGTCTCAATTCCCAGGACTCCAGTATTGAAATTTCAAAGCTTACTGATAAGGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222481.2
CDS-3UTR CAA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATCTCACCATTGTCGCATaGCCTTTCTCAACAGCCCAA +
Preference number: 5 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDLTIVA*PFSTAQ
Trigger: TTGGGCTGTTGAGAAAGGCAATGCGACAATGGTGAG...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCGGAGTGTCACCTTTCTaGTCCACAGCAGACACCCTA +
Preference number: 5 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFGVSPF*STADTL
Trigger: TAGGGTGTCTGCTGTGGACAAGAAAGGTGACACTCC...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCCCTCCTGCACTCCTGTaGCTTCTGAGCACGAAATGT +
Preference number: 5 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFPPALL*LLSTKC
Trigger: ACATTTCGTGCTCAGAAGCAACAGGAGTGCAGGAGG...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp TCAATGCAGGATGAAGACAGGCACACCTCTAGCCTAAATGTATGTGGTCATTCTCAAGAACTGGAGTCCTaGAAGACAAAAACACTTCAA +
Preference number: 5 (lower is better)
Translates to: SMQDEDRHTSSLNVCGHSQELES*KTKTLQ
Trigger: TTGAAGTGTTTTTGTCTTCAAGGACTCCAGTTCTTG...AGAATGACCACATACATTTAGGCTAGAGGTGTGCCTGTCTTCATCCTGCATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS-3UTR CAA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTGGGAGAACTCTCATaGGACCTCACTCCCGAATCG +
Preference number: 5 (lower is better)
Translates to: KAMILIQNTGYPFARYSLLGELS*DLTPES
Trigger: CGATTCGGGAGTGAGGTCCAATGAGAGTTCTCCCAA...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTAGCTATGACAGGATCTaGCAGGCCACTCAGACTGTG +
Preference number: 5 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSSYDRI*QATQTV
Trigger: CACAGTCTGAGTGGCCTGCAAGATCCTGTCATAGCT...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS TCA 90 bp CCAAAGTTCATAGCCATCTCTTTCTTCAGCTCATCAATATTACACTaGGCCAATACCCGGCCATTTATGTTTGCCTTTTTGATGGTTGTG +
Preference number: 5 (lower is better)
Translates to: PKFIAISFFSSSILH*ANTRPFMFAFLMVV
Trigger: CACAACCATCAAAAAGGCAAACATAAATGGCCGGGTATTGGCTCAGTGTAATATTGATGAGCTGAAGAAAGAGATGGCTATGAACTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCACCATTGTCGCATaGCCTTTCTCAACAGCCCAA +
Preference number: 5 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSLTIVA*PFSTAQ
Trigger: TTGGGCTGTTGAGAAAGGCAATGCGACAATGGTGAG...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGCTGTTGAGGGCCGTTTaGCTACCAAGCTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPLLRAV*LPSFVI
Trigger: GATGACAAAGCTTGGTAGCAAAACGGCCCTCAACAG...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCGCAAGGCCTCCTATGTaGATCTGTTCTCTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFARPPM*ICSLAA
Trigger: AGCTGCAAGAGAACAGATCAACATAGGAGGCCTTGC...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp CTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCGCACTGGAGTTTTCATaGAGAAAACGTGGGTCTTCG +
Preference number: 5 (lower is better)
Translates to: LGLFPCDLSPFNLNTFPTALEFS*RKRGSS
Trigger: CGAAGACCCACGTTTTCTCAATGAAAACTCCAGTGC...GGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTCGTTCTGAAGACTTCTaGCCTGGGAGCAGCTTACTA +
Preference number: 5 (lower is better)
Translates to: KAMILIQNTGYPFARYSLRSEDF*PGSSLL
Trigger: TAGTAAGCTGCTCCCAGGCAAGAAGTCTTCAGAACG...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTTTGTGGAGAGAGTGGTaGGGAGAACTCTCATTGGAC +
Preference number: 5 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSLWREW*GELSLD
Trigger: GTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAA...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGTTGTGGAGAGAGTGGTaGGGAGAACTCTCATTGGAC +
Preference number: 5 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPLWREW*GELSLD
Trigger: GTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAA...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATTCTTCCAGGTTGCAGTaGGCTCCATTCTTAATGAGT +
Preference number: 5 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDSSRLQ*APFLMS
Trigger: ACTCATTAAGAATGGAGCCAACTGCAACCTGGAAGA...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTCCCACACCAAAGGAGTaGTTCCATACTTATCAGAGC +
Preference number: 5 (lower is better)
Translates to: KAMILIQNTGYPFARYSLPTPKE*FHTYQS
Trigger: GCTCTGATAAGTATGGAACAACTCCTTTGGTGTGGG...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp TTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTCTCTGTATTCAGCCTGATCGAATTAGCTCCTTCTaGATCAACATCAGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: LSPFNLNTFPTSLCIQPDRISSF*INISSH
Trigger: ATGGGAGCTGATGTTGATCAAGAAGGAGCTAATTCG...ATCAGGCTGAATACAGAGAGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp GGGAAAATTAACCGAATTGTCAGGAGAATGAGAAAGAAGCGCTGCTTGGTCTATAGAAATTTTCTTGCATaGCTAAGCCCACGACTATTA +
Preference number: 5 (lower is better)
Translates to: GKINRIVRRMRKKRCLVYRNFLA*LSPRLL
Trigger: TAATAGTCGTGGGCTTAGCAATGCAAGAAAATTTCT...ATAGACCAAGCAGCGCTTCTTTCTCATTCTCCTGACAATTCGGTTAATTTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTGATGCCTGTCTCTGTTaGTTAAACCCAGAGTCACAC +
Preference number: 5 (lower is better)
Translates to: KAMILIQNTGYPFARYSLDACLC*LNPESH
Trigger: GTGTGACTCTGGGTTTAACAAACAGAGACAGGCATC...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp GCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTAGATGCCTGTCTCTGTTaGTTAAACCCAGAGTCACAC +
Preference number: 5 (lower is better)
Translates to: AMILIQNTGYPFARYSLLDACLC*LNPESH
Trigger: GTGTGACTCTGGGTTTAACAAACAGAGACAGGCATC...TAAAAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp GCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTACTCTCATCTACATCTTaGCACTTCTCAAGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: AMILIQNTGYPFARYSLLLSSTS*HFSRRA
Trigger: AGCCCTTCTTGAGAAGTGCAAAGATGTAGATGAGAG...TAAAAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp GCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTAGGATATCTCTCACCATaGTCGCATTGCCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: AMILIQNTGYPFARYSLLGYLSP*SHCLSQ
Trigger: TTGAGAAAGGCAATGCGACAATGGTGAGAGATATCC...TAAAAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS CCA 90 bp GATAGATGCAATGGATATGAGGATAGCATTCACTGTCAGATGTTTTaGGTCAACTCGGAATATAGCCAAAAGAGTAATTCCAGCAATAAT +
Preference number: 5 (lower is better)
Translates to: DRCNGYEDSIHCQMF*VNSEYSQKSNSSNN
Trigger: ATTATTGCTGGAATTACTCTTTTGGCTATATTCCGAGTTGACCCAAAACATCTGACAGTGAATGCTATCCTCATATCCATTGCATCTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp TCTCTGGGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGTCATCTTCTAGTTTCTaGAGTAAGAAGGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: SLGLFPCDLSPFNLNTFPSSSSF*SKKDFP
Trigger: TGGGAAGTCCTTCTTACTCAAGAAACTAGAAGATGA...CGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACCCAGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp CTTAAATCCTACAATTACAGAGAACAGATACATCTGGTTAAGGTGACACATTTCTCATCTTCTAGTTTCTaGAGTAAGAAGGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: LKSYNYREQIHLVKVTHFSSSSF*SKKDFP
Trigger: TGGGAAGTCCTTCTTACTCAAGAAACTAGAAGATGA...GAAATGTGTCACCTTAACCAGATGTATCTGTTCTCTGTAATTGTAGGATTTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS-3UTR CAA 90 bp GGTTTATTTCCTTGTGACTTAAGCCCTTTCAATTTAAATACATTTCCGACCTCTTATATCAGCGTATTTTaGGAGAAGTGCTCGAACAAT +
Preference number: 5 (lower is better)
Translates to: GLFPCDLSPFNLNTFPTSYISVF*EKCSNN
Trigger: ATTGTTCGAGCACTTCTCCAAAAATACGCTGATATA...AGAGGTCGGAAATGTATTTAAATTGAAAGGGCTTAAGTCACAAGGAAATAAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCAGAAATTTTCTTGCATaGCTAAGCCCACGACTATTA +
Preference number: 5 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCRNFLA*LSPRLL
Trigger: TAATAGTCGTGGGCTTAGCAATGCAAGAAAATTTCT...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp AAAGCAATGATTCTTATACAGAACACTGGCTATCCATTTGCTAGGTATTCACTTTTATCCTTATCATCTTaGAGCAGTGGGGTATTATCT +
Preference number: 5 (lower is better)
Translates to: KAMILIQNTGYPFARYSLLSLSS*SSGVLS
Trigger: AGATAATACCCCACTGCTCAAAGATGATAAGGATAA...AAGTGAATACCTAGCAAATGGATAGCCAGTGTTCTGTATAAGAATCATTGCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS-3UTR CAA 90 bp AAAACCTATAAATCTGCACCAAGATTAAACACTACCAGTGAAATTGGTTTCTGCTTATCCTTATCATCTTaGAGCAGTGGGGTATTATCT +
Preference number: 5 (lower is better)
Translates to: KTYKSAPRLNTTSEIGFCLSLSS*SSGVLS
Trigger: AGATAATACCCCACTGCTCAAAGATGATAAGGATAA...GCAGAAACCAATTTCACTGGTAGTGTTTAATCTTGGTGCAGATTTATAGGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS CCA 72 bp TCCCGACAGGCCGCTGTAGTAGCTGCTGTGGGGCTGTaGGGACACAACGCCGCCTGGGAACGGCCCATTGAA +
Preference number: 6 (lower is better)
Translates to: SRQAAVVAAVGL*GHNAAWERPIE
Trigger: TTCAATGGGCCGTTCCCAGGCGGCGTTGTGTCCCCACAGCCCCACAGCAGCTACTACAGCGGCCTGTCGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 72 bp GCTGTGGGGACACAACGCCGCCTGGGAACGGCCCATTaGAAGATGCTGAGGAGGAGCAGACAGATGCAGGCT +
Preference number: 6 (lower is better)
Translates to: AVGTQRRLGTAH*KMLRRSRQMQA
Trigger: AGCCTGCATCTGTCTGCTCCTCCTCAGCATCTTTCAATGGGCCGTTCCCAGGCGGCGTTGTGTCCCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp TCTGCCAGTCTCCGGCTCCTCCCTCGGATGGCAACGTaGAGGGGAGTGTCACCTTTCTTGTCCACAGCAGAC +
Preference number: 6 (lower is better)
Translates to: SASLRLLPRMAT*RGVSPFLSTAD
Trigger: GTCTGCTGTGGACAAGAAAGGTGACACTCCCCTGCACGTTGCCATCCGAGGGAGGAGCCGGAGACTGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 72 bp CACAACGCCGCCTGGGAACGGCCCATTGAAAGATGCTaGGGAGGAGCAGACAGATGCAGGCTGACTGTACCC +
Preference number: 6 (lower is better)
Translates to: HNAAWERPIERC*GGADRCRLTVP
Trigger: GGGTACAGTCAGCCTGCATCTGTCTGCTCCTCCTCAGCATCTTTCAATGGGCCGTTCCCAGGCGGCGTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp CAGCTTGAAGAGGAGCTCCAGGTACCCAATGTGCCTTaGCAGTCTGGTGCTGAGAGCCCAGGCCCAGTTCCA +
Preference number: 6 (lower is better)
Translates to: QLEEELQVPNVP*QSGAESPGPVP
Trigger: TGGAACTGGGCCTGGGCTCTCAGCACCAGACTGGCAAGGCACATTGGGTACCTGGAGCTCCTCTTCAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 72 bp TTGAAAGATGCTGAGGAGGAGCAGACAGATGCAGGCTaGCTGTACCCAGAAGGAGGCCGAGGAGGGGCTTCG +
Preference number: 6 (lower is better)
Translates to: LKDAEEEQTDAG*LYPEGGRGGAS
Trigger: CGAAGCCCCTCCTCGGCCTCCTTCTGGGTACAGTCAGCCTGCATCTGTCTGCTCCTCCTCAGCATCTTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp AACATCAGCTTGAAGAGGAGCTCCAGGTACCCAATGTaGCTTGCCAGTCTGGTGCTGAGAGCCCAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: NISLKRSSRYPM*LASLVLRAQAQ
Trigger: CTGGGCCTGGGCTCTCAGCACCAGACTGGCAAGGCACATTGGGTACCTGGAGCTCCTCTTCAAGCTGATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp CTTCGCTTGTGCGCCATGCTCTTCAGGTTTTCATTCTaGACAGCAGTTGGGTTGGGACTGGGCCCAGGCCTC +
Preference number: 6 (lower is better)
Translates to: LRLCAMLFRFSF*TAVGLGLGPGL
Trigger: GAGGCCTGGGCCCAGTCCCAACCCAACTGCTGTGCAGAATGAAAACCTGAAGAGCATGGCGCACAAGCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 72 bp GCAGCTCAGACGCATCTTTCGAGAGCCTGGTGTAACTaGAGCGCTGGCTTCGCTTGTGCGCCATGCTCTTCA +
Preference number: 6 (lower is better)
Translates to: AAQTHLSRAWCN*SAGFACAPCSS
Trigger: TGAAGAGCATGGCGCACAAGCGAAGCCAGCGCTCCAGTTACACCAGGCTCTCGAAAGATGCGTCTGAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp GGGGCTTCGTGCAGAGGGAGCGGGGGATACGCAAGGCCTCCTATGTaGATCTGTTCTCTTGCAGCTCGAACATCTGCAATGATCTCCCGT +
Preference number: 6 (lower is better)
Translates to: GASCRGSGGYARPPM*ICSLAARTSAMISR
Trigger: ACGGGAGATCATTGCAGATGTTCGAGCTGCAAGAGAACAGATCAACATAGGAGGCCTTGCGTATCCCCCGCTCCCTCTGCACGAAGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 72 bp GCGTCCAGGCCGTCAATGATAACCACCAGCCTCGTCTaGTTCTGCGTGAAGCTGTCGATGGTCTTGGCCATC +
Preference number: 6 (lower is better)
Translates to: ASRPSMITTSLV*FCVKLSMVLAI
Trigger: GATGGCCAAGACCATCGACAGCTTCACGCAGAATCAGACGAGGCTGGTGGTTATCATTGACGGCCTGGACGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 72 bp CTCGCTTCCCACTGTGGCCCTCATCTTCAAGCTCGATaGGATTCGCCTTTTCCAGCTGGGAGTCATCCGCTG +
Preference number: 6 (lower is better)
Translates to: LASHCGPHLQAR*DSPFPAGSHPL
Trigger: CAGCGGATGACTCCCAGCTGGAAAAGGCGAATCTCATCGAGCTTGAAGATGAGGGCCACAGTGGGAAGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 72 bp GTTCTGCGAGTTTGTGACTGCCAACTCAGATTACTGTaGCGTGGGGCTCCCTCGTCTAGGCCAAGCGTGTTC +
Preference number: 6 (lower is better)
Translates to: VLRVCDCQLRLL*RGAPSSRPSVF
Trigger: GAACACGCTTGGCCTAGACGAGGGAGCCCCACGGCACAGTAATCTGAGTTGGCAGTCACAAACTCGCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 72 bp AGACTCGAGAGACTTGGGGTTCTGCGAGTTTGTGACTaGCAACTCAGATTACTGTGCCGTGGGGCTCCCTCG +
Preference number: 6 (lower is better)
Translates to: RLERLGVLRVCD*QLRLLCRGAPS
Trigger: CGAGGGAGCCCCACGGCACAGTAATCTGAGTTGGCAGTCACAAACTCGCAGAACCCCAAGTCTCTCGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222481.2
ENSMUST00000222941.2
CDS CCA 72 bp AAAGAAGTTCTGCCAGTCTCCGGCTCCTCCCTCGGATaGCAACGTGCAGGGGAGTGTCACCTTTCTTGTCCA +
Preference number: 6 (lower is better)
Translates to: KEVLPVSGSSLG*QRAGECHLSCP
Trigger: TGGACAAGAAAGGTGACACTCCCCTGCACGTTGCCATCCGAGGGAGGAGCCGGAGACTGGCAGAACTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 72 bp GAGGTGCCTGTGGCAGGGACGGATGCCTGTCTCTGTTaGTTAAACCCAGAGTCACACAGCTCCATCAGCTGC +
Preference number: 6 (lower is better)
Translates to: EVPVAGTDACLC*LNPESHSSISC
Trigger: GCAGCTGATGGAGCTGTGTGACTCTGGGTTTAACAAACAGAGACAGGCATCCGTCCCTGCCACAGGCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS GCA 72 bp CAGAAGATGCACTATGTCGGCGTGGCCTCTGCCCGCTaGCCAGATGATTGGGTAGACACTGTACAAACCAGT +
Preference number: 6 (lower is better)
Translates to: QKMHYVGVASAR*PDDWVDTVQTS
Trigger: ACTGGTTTGTACAGTGTCTACCCAATCATCTGGGCAGCGGGCAGAGGCCACGCCGACATAGTGCATCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 72 bp AGCAGCAGGATGAGGAACACGATGAGCCACGAGAACTaGAAAAGGGGCTCAATCTGCTGCCCTGCAAACGTC +
Preference number: 6 (lower is better)
Translates to: SSRMRNTMSHEN*KRGSICCPANV
Trigger: GACGTTTGCAGGGCAGCAGATTGAGCCCCTTTTCCAGTTCTCGTGGCTCATCGTGTTCCTCATCCTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CCA 72 bp AGCTGGGAGTCATCCGCTGCCTCATTGTGGAGAGAGTaGTTGGGAGAACTCTCATTGGACCTCACTCCCGAA +
Preference number: 6 (lower is better)
Translates to: SWESSAASLWRE*LGELSLDLTPE
Trigger: TTCGGGAGTGAGGTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGATGACTCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 72 bp GCCTTTTCCAGCTGGGAGTCATCCGCTGCCTCATTGTaGAGAGAGTGGTTGGGAGAACTCTCATTGGACCTC +
Preference number: 6 (lower is better)
Translates to: AFSSWESSAASL*REWLGELSLDL
Trigger: GAGGTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGATGACTCCCAGCTGGAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 72 bp CCACTCAGACTGTGTGGCATCCCTCGCTTCCCACTGTaGCCCTCATCTTCAAGCTCGATGAGATTCGCCTTT +
Preference number: 6 (lower is better)
Translates to: PLRLCGIPRFPL*PSSSSSMRFAF
Trigger: AAAGGCGAATCTCATCGAGCTTGAAGATGAGGGCCACAGTGGGAAGCGAGGGATGCCACACAGTCTGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 72 bp TGGGAGTCATCCGCTGCCTCATTGTGGAGAGAGTGGTaGGGAGAACTCTCATTGGACCTCACTCCCGAATCG +
Preference number: 6 (lower is better)
Translates to: WESSAASLWREW*GELSLDLTPES
Trigger: CGATTCGGGAGTGAGGTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGATGACTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp TCGATGAGATTCGCCTTTTCCAGCTGGGAGTCATCCGCTGCCTCATaGTGGAGAGAGTGGTTGGGAGAACTCTCATTGGACCTCACTCCC +
Preference number: 6 (lower is better)
Translates to: SMRFAFSSWESSAAS*WREWLGELSLDLTP
Trigger: GGGAGTGAGGTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGATGACTCCCAGCTGGAAAAGGCGAATCTCATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp TTGTGCGCCATGCTCTTCAGGTTTTCATTCTGCACAGCAGTTGGGTaGGGACTGGGCCCAGGCCTCAAAATGACCTGGGATGTTTCCCTG +
Preference number: 6 (lower is better)
Translates to: LCAMLFRFSFCTAVG*GLGPGLKMTWDVSL
Trigger: CAGGGAAACATCCCAGGTCATTTTGAGGCCTGGGCCCAGTCCCAACCCAACTGCTGTGCAGAATGAAAACCTGAAGAGCATGGCGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS TCA 72 bp GCTCTGGTAGTTCGGGTGGGTTCACAAACATCAGCTTaGAGAGGAGCTCCAGGTACCCAATGTGCCTTGCCA +
Preference number: 6 (lower is better)
Translates to: ALVVRVGSQTSA*RGAPGTQCALP
Trigger: TGGCAAGGCACATTGGGTACCTGGAGCTCCTCTTCAAGCTGATGTTTGTGAACCCACCCGAACTACCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp ACTCGGACAGTGTCCAGCATCTGCAGCACTTTATCTTaGTCACAGGCGTCCAGGCCGTCAATGATAACCACC +
Preference number: 6 (lower is better)
Translates to: TRTVSSICSTLS*SQASRPSMITT
Trigger: GGTGGTTATCATTGACGGCCTGGACGCCTGTGAGCAAGATAAAGTGCTGCAGATGCTGGACACTGTCCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp CCCTTTGAAAACAGAACTCGGACAGTGTCCAGCATCTaGAGCACTTTATCTTGCTCACAGGCGTCCAGGCCG +
Preference number: 6 (lower is better)
Translates to: PFENRTRTVSSI*STLSCSQASRP
Trigger: CGGCCTGGACGCCTGTGAGCAAGATAAAGTGCTGCAGATGCTGGACACTGTCCGAGTTCTGTTTTCAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp AGATATAGTATGAGCCAGGACGTCCGGTATGGCCACTaGTCAGTAAGGTTGATCCAGCTGGCTAGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: RYSMSQDVRYGH*SVRLIQLASLS
Trigger: GGACAGGCTAGCCAGCTGGATCAACCTTACTGAGCAGTGGCCATACCGGACGTCCTGGCTCATACTATATCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp GATGAGATTCGCCTTTTCCAGCTGGGAGTCATCCGCTaGCTCATTGTGGAGAGAGTGGTTGGGAGAACTCTC +
Preference number: 6 (lower is better)
Translates to: DEIRLFQLGVIR*LIVERVVGRTL
Trigger: GAGAGTTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGATGACTCCCAGCTGGAAAAGGCGAATCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 72 bp TGGTGGGCGCAGTGTTGTTGTTCAGAGTCACAGTGCTaGGTGTTCGGTTTAGATTGTAGGCCTTCTGGCACG +
Preference number: 6 (lower is better)
Translates to: WWAQCCCSESQC*VFGLDCRPSGT
Trigger: CGTGCCAGAAGGCCTACAATCTAAACCGAACACCCAGCACTGTGACTCTGAACAACAACACTGCGCCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 72 bp CCACAGTCATTGAACTCAGTAACAGAGAGGTGCCTGTaGCAGGGACGGATGCCCTGTTGTAGAAAGGGTGCT +
Preference number: 6 (lower is better)
Translates to: PQSLNSVTERCL*QGRMPCCRKGA
Trigger: AGCACCCTTTCTACAACAGGGCATCCGTCCCTGCCACAGGCACCTCTCTGTTACTGAGTTCAATGACTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220459.2
CDS CAA 72 bp TGCAGAGGGAGCGGGGGATACGCAAGGCCTCCTATGTaGATCTGTTCTCTTGCAGCTCGAACATCTGCAATG +
Preference number: 6 (lower is better)
Translates to: CRGSGGYARPPM*ICSLAARTSAM
Trigger: CATTGCAGATGTTCGAGCTGCAAGAGAACAGATCAACATAGGAGGCCTTGCGTATCCCCCGCTCCCTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 72 bp TTCGCCTTTTCCAGCTGGGAGTCATCCGCTGCCTCATaGTGGAGAGAGTGGTTGGGAGAACTCTCATTGGAC +
Preference number: 6 (lower is better)
Translates to: FAFSSWESSAAS*WREWLGELSLD
Trigger: GTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGATGACTCCCAGCTGGAAAAGGCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 72 bp TTCCGAGCAAATGGACATCCGAGCTATGACAGGATCTaGCAGGCCACTCAGACTGTGTGGCATCCCTCGCTT +
Preference number: 6 (lower is better)
Translates to: FRANGHPSYDRI*QATQTVWHPSL
Trigger: AAGCGAGGGATGCCACACAGTCTGAGTGGCCTGCAAGATCCTGTCATAGCTCGGATGTCCATTTGCTCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 72 bp GAGGTGCCTGTGGCAGGGACGGATGCCTGTCTCTGTTaGTTAAACCCAGAGTCACACAGTAGGCCATTGTTC +
Preference number: 6 (lower is better)
Translates to: EVPVAGTDACLC*LNPESHSRPLF
Trigger: GAACAATGGCCTACTGTGTGACTCTGGGTTTAACAAACAGAGACAGGCATCCGTCCCTGCCACAGGCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222941.2
CDS CAA 90 bp TCATCCGCTGCCTCATTGTGGAGAGAGTGGTTGGGAGAACTCTCATaGGACCTCACTCCCGAATCGGAGGAATCTTTCTTGTCGAGGAGG +
Preference number: 6 (lower is better)
Translates to: SSAASLWREWLGELS*DLTPESEESFLSRR
Trigger: CCTCCTCGACAAGAAAGATTCCTCCGATTCGGGAGTGAGGTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp TTTTCCAGCTGGGAGTCATCCGCTGCCTCATTGTGGAGAGAGTGGTaGGGAGAACTCTCATTGGACCTCACTCCCGAATCGGAGGAATCT +
Preference number: 6 (lower is better)
Translates to: FSSWESSAASLWREW*GELSLDLTPESEES
Trigger: AGATTCCTCCGATTCGGGAGTGAGGTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGATGACTCCCAGCTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp TTTCTTGTCTTCCGAGCAAATGGACATCCGAGCTATGACAGGATCTaGCAGGCCACTCAGACTGTGTGGCATCCCTCGCTTCCCACTGTG +
Preference number: 6 (lower is better)
Translates to: FLVFRANGHPSYDRI*QATQTVWHPSLPTV
Trigger: CACAGTGGGAAGCGAGGGATGCCACACAGTCTGAGTGGCCTGCAAGATCCTGTCATAGCTCGGATGTCCATTTGCTCGGAAGACAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp TCTTCAGGGCTGCTAGCGATCAGGCTGCACTCAGAGGGGCTTTTCTaGTCTTCCGAGCAAATGGACATCCGAGCTATGACAGGATCTTGC +
Preference number: 6 (lower is better)
Translates to: SSGLLAIRLHSEGLF*SSEQMDIRAMTGSC
Trigger: GCAAGATCCTGTCATAGCTCGGATGTCCATTTGCTCGGAAGACAAGAAAAGCCCCTCTGAGTGCAGCCTGATCGCTAGCAGCCCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 72 bp GCCCCACACTTCAGCAGCTCTTCCACAATGTGGATGTaGCCCTCTTTAGATGCTGATATAAGCGCAGTCCAG +
Preference number: 6 (lower is better)
Translates to: APHFSSSSTMWM*PSLDADISAVQ
Trigger: CTGGACTGCGCTTATATCAGCATCTAAAGAGGGGCACATCCACATTGTGGAAGAGCTGCTGAAGTGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 72 bp GATGGGTGGCTGCATGGTGGGCTCACTGAGAATATCTaGCAGGGCGCTGCTATACAAATCGTAACCAAGCAT +
Preference number: 6 (lower is better)
Translates to: DGWLHGGLTENI*QGAAIQIVTKH
Trigger: ATGCTTGGTTACGATTTGTATAGCAGCGCCCTGGCAGATATTCTCAGTGAGCCCACCATGCAGCCACCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp TGTTGGTGGGCGCAGTGTTGTTGTTCAGAGTCACAGTaGTGGGTGTTCGGTTTAGATTGTAGGCCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: CWWAQCCCSESQ*WVFGLDCRPSG
Trigger: GCCAGAAGGCCTACAATCTAAACCGAACACCCAGCACTGTGACTCTGAACAACAACACTGCGCCCACCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 72 bp GGAACCGCCAGGGTAATACCTTGGCGTGTAAAGGTATaGGGCAAAGAATGGCCTGTTGTAGAAAGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: GTARVIPWRVKV*GKEWPVVERVL
Trigger: CAGCACCCTTTCTACAACAGGCCATTCTTTGCCCCATACCTTTACACGCCAAGGTATTACCCTGGCGGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CCA 72 bp TCATCTTCAAGCTCGATGAGATTCGCCTTTTCCAGCTaGGAGTCATCCGCTGCCTCATTGTGGAGAGAGTGG +
Preference number: 6 (lower is better)
Translates to: SSSSSMRFAFSS*ESSAASLWREW
Trigger: CCACTCTCTCCACAATGAGGCAGCGGATGACTCCCAGCTGGAAAAGGCGAATCTCATCGAGCTTGAAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 72 bp CCACAGTCATTGAACTCAGTAACAGAGAGGTGCCTGTaGCAGGGACGGATGCTAGGCCATTGTTCTGATCTC +
Preference number: 6 (lower is better)
Translates to: PQSLNSVTERCL*QGRMLGHCSDL
Trigger: GAGATCAGAACAATGGCCTAGCATCCGTCCCTGCCACAGGCACCTCTCTGTTACTGAGTTCAATGACTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS CAA 72 bp AACTCGGACAGTGTCCAGCATCTGCAGCACTTTATCTaGCTCACAGGCGTCCAGGCCGTCAATGATAACCAC +
Preference number: 6 (lower is better)
Translates to: NSDSVQHLQHFI*LTGVQAVNDNH
Trigger: GTGGTTATCATTGACGGCCTGGACGCCTGTGAGCAAGATAAAGTGCTGCAGATGCTGGACACTGTCCGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 72 bp TCTGTCTGGAAGAGACTAGGCCGTTCTGAAGACTTCTaGCCTGGGAGCAGCTTACTACCTGACTGGTCGGAT +
Preference number: 6 (lower is better)
Translates to: SVWKRLGRSEDF*PGSSLLPDWSD
Trigger: ATCCGACCAGTCAGGTAGTAAGCTGCTCCCAGGCAAGAAGTCTTCAGAACGGCCTAGTCTCTTCCAGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 72 bp CTGCTAGCGATCAGGCTGCACTCAGAGGGGCTTTTCTaGTCTTCCGAGCAAATGGACATCCGAGCTATGACA +
Preference number: 6 (lower is better)
Translates to: LLAIRLHSEGLF*SSEQMDIRAMT
Trigger: TGTCATAGCTCGGATGTCCATTTGCTCGGAAGACAAGAAAAGCCCCTCTGAGTGCAGCCTGATCGCTAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 72 bp ATGCTCTTCAGGTTTTCATTCTGCACAGCAGTTGGGTaGGGACTGGGCCCAGGCCTCAAAATGACCTGGGAT +
Preference number: 6 (lower is better)
Translates to: MLFRFSFCTAVG*GLGPGLKMTWD
Trigger: ATCCCAGGTCATTTTGAGGCCTGGGCCCAGTCCCAACCCAACTGCTGTGCAGAATGAAAACCTGAAGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp TTTGTCGTTTGCTCTGGTAGTTCGGGTGGGTTCACAAACATCAGCTaGAAGAGGAGCTCCAGGTACCCAATGTGCCTTGCCAGTCTGGTG +
Preference number: 6 (lower is better)
Translates to: FVVCSGSSGGFTNIS*KRSSRYPMCLASLV
Trigger: CACCAGACTGGCAAGGCACATTGGGTACCTGGAGCTCCTCTTCAAGCTGATGTTTGTGAACCCACCCGAACTACCAGAGCAAACGACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 90 bp AGTAACAGAGAGGTGCCTGTGGCAGGGACGGATGCCTGTCTCTGTTaGTTAAACCCAGAGTCACACAGCTCCATCAGCTGCTTTCTTGTC +
Preference number: 6 (lower is better)
Translates to: SNREVPVAGTDACLC*LNPESHSSISCFLV
Trigger: GACAAGAAAGCAGCTGATGGAGCTGTGTGACTCTGGGTTTAACAAACAGAGACAGGCATCCGTCCCTGCCACAGGCACCTCTCTGTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS CAA 90 bp CGGGCAGCCCACACCAAAGGAGTTGTTCCATACTTATCAGAGCAATaGACTTTCGCACCATTCTGCAGCAGAAGATGCACTATGTCGGCG +
Preference number: 6 (lower is better)
Translates to: RAAHTKGVVPYLSEQ*TFAPFCSRRCTMSA
Trigger: CGCCGACATAGTGCATCTTCTGCTGCAGAATGGTGCGAAAGTCAATTGCTCTGATAAGTATGGAACAACTCCTTTGGTGTGGGCTGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS TCA 72 bp GGTAGCCAGAAAGCCGAATTCTCTCTCACAAGCATCTaGGAGGGTCGCGATCATTTCAGCCAAGGAAGTCTC +
Preference number: 6 (lower is better)
Translates to: GSQKAEFSLTSI*EGRDHFSQGSL
Trigger: GAGACTTCCTTGGCTGAAATGATCGCGACCCTCTCAGATGCTTGTGAGAGAGAATTCGGCTTTCTGGCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 72 bp ATCCAGCTGGCTAGCCTGTCCCAGTTGAAAGTAATCTaGTTGGCTCTTAGTAGCCGCCCTGTCACCGAAACA +
Preference number: 6 (lower is better)
Translates to: IQLASLSQLKVI*LALSSRPVTET
Trigger: TGTTTCGGTGACAGGGCGGCTACTAAGAGCCAATCAGATTACTTTCAACTGGGACAGGCTAGCCAGCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 72 bp GTGCCTGTGGCAGGGACGGATGCTAGGCCATTGTTCTaGTCTCTGGGCAAACTCGTTTTTACTGATGAACGT +
Preference number: 6 (lower is better)
Translates to: VPVAGTDARPLF*SLGKLVFTDER
Trigger: ACGTTCATCAGTAAAAACGAGTTTGCCCAGAGATCAGAACAATGGCCTAGCATCCGTCCCTGCCACAGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS GCA 72 bp TCAGTAACCAGCAGCTTTGTGAGATCAAAGGACATCTaGCTCGTGATGGTTCTCTGCATCTGCCTTCTGCGG +
Preference number: 6 (lower is better)
Translates to: SVTSSFVRSKDI*LVMVLCICLLR
Trigger: CCGCAGAAGGCAGATGCAGAGAACCATCACGAGGCAGATGTCCTTTGATCTCACAAAGCTGCTGGTTACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp TGTTTGTTAAACCCAGAGTCACACAGCTCCATCAGCTaGTTTCTTGTCCAGCTCTTCTCCCTCGAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: CLLNPESHSSIS*FLVQLFSLEEA
Trigger: AGCCTCCTCGAGGGAGAAGAGCTGGACAAGAAAGCAGCTGATGGAGCTGTGTGACTCTGGGTTTAACAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS GCA 72 bp CGATATCCACAGTCATTGAACTCAGTAACAGAGAGGTaGCTGTGGCAGGGACGGATGCCTGTCTCTGTTTGT +
Preference number: 6 (lower is better)
Translates to: RYPQSLNSVTER*LWQGRMPVSVC
Trigger: ACAAACAGAGACAGGCATCCGTCCCTGCCACAGGCACCTCTCTGTTACTGAGTTCAATGACTGTGGATATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066652.7
ENSMUST00000222941.2
CDS GCA 72 bp GTGGAGAAGATCTGCCGCTTATTGTTGACGACCCTGTaGCCCCTTCTAACTGGGACATCTGAGCAATGTACT +
Preference number: 6 (lower is better)
Translates to: VEKICRLLLTTL*PLLTGTSEQCT
Trigger: AGTACATTGCTCAGATGTCCCAGTTAGAAGGGGGCACAGGGTCGTCAACAATAAGCGGCAGATCTTCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 72 bp CGATATCCACAGTCATTGAACTCAGTAACAGAGAGGTaGCTGTGGCAGGGACGGATGCCCTGTTGTAGAAAG +
Preference number: 6 (lower is better)
Translates to: RYPQSLNSVTER*LWQGRMPCCRK
Trigger: CTTTCTACAACAGGGCATCCGTCCCTGCCACAGGCACCTCTCTGTTACTGAGTTCAATGACTGTGGATATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220459.2
CDS GCA 72 bp CGATATCCACAGTCATTGAACTCAGTAACAGAGAGGTaGCTGTGGCAGGGACGGATGCTAGGCCATTGTTCT +
Preference number: 6 (lower is better)
Translates to: RYPQSLNSVTER*LWQGRMLGHCS
Trigger: AGAACAATGGCCTAGCATCCGTCCCTGCCACAGGCACCTCTCTGTTACTGAGTTCAATGACTGTGGATATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222013.2
CDS CCA 72 bp CTGCTTTGTTGGGCCTGTAAAGTAACCGTCCATCTTTaGGGTTCCGTAAAAGAAGTTCTGCCAGTCTCCGGC +
Preference number: 6 (lower is better)
Translates to: LLCWACKVTVHL*GSVKEVLPVSG
Trigger: GCCGGAGACTGGCAGAACTTCTTTTACGGAACCCCAAAGATGGACGGTTACTTTACAGGCCCAACAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CCA 72 bp TGCAGTCAATGTTGTAGGGAGTCTCGCCTGCTTTGTTaGGCCTGTAAAGTAACCGTCCATCTTTGGGGTTCC +
Preference number: 6 (lower is better)
Translates to: CSQCCRESRLLC*ACKVTVHLWGS
Trigger: GGAACCCCAAAGATGGACGGTTACTTTACAGGCCCAACAAAGCAGGCGAGACTCCCTACAACATTGACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CCA 72 bp GAAGACTTCTTGCCTGGGAGCAGCTTACTACCTGACTaGTCGGATTTCTCATCTTCCTCAGTAATGGGGTCC +
Preference number: 6 (lower is better)
Translates to: EDFLPGSSLLPD*SDFSSSSVMGS
Trigger: GGACCCCATTACTGAGGAAGATGAGAAATCCGACCAGTCAGGTAGTAAGCTGCTCCCAGGCAAGAAGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 72 bp AGTATGTGCTGTGTGGAGAAGATCTGCCGCTTATTGTaGACGACCCTGTGCCCCCTTCTAACTGGGACATCT +
Preference number: 6 (lower is better)
Translates to: SMCCVEKICRLL*TTLCPLLTGTS
Trigger: AGATGTCCCAGTTAGAAGGGGGCACAGGGTCGTCAACAATAAGCGGCAGATCTTCTCCACACAGCACATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 72 bp TGTAGTATGTGCTGTGTGGAGAAGATCTGCCGCTTATaGTTGACGACCCTGTGCCCCCTTCTAACTGGGACA +
Preference number: 6 (lower is better)
Translates to: CSMCCVEKICRL*LTTLCPLLTGT
Trigger: TGTCCCAGTTAGAAGGGGGCACAGGGTCGTCAACAATAAGCGGCAGATCTTCTCCACACAGCACATACTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 72 bp GCCTCATTGTGGAGAGAGTGGTTGGGAGAACTCTCATaGGACCTCACTCCCGAATCGGAGGAATCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: ASLWREWLGELS*DLTPESEESFL
Trigger: CAAGAAAGATTCCTCCGATTCGGGAGTGAGGTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAATGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp GACCTATGTAGTATGTGCTGTGTGGAGAAGATCTGCCGCTTATTGTaGACGACCCTGTGCCCCCTTCTAACTGGGACATCTGAGCAATGT +
Preference number: 6 (lower is better)
Translates to: DLCSMCCVEKICRLL*TTLCPLLTGTSEQC
Trigger: ACATTGCTCAGATGTCCCAGTTAGAAGGGGGCACAGGGTCGTCAACAATAAGCGGCAGATCTTCTCCACACAGCACATACTACATAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp TCTGACCTATGTAGTATGTGCTGTGTGGAGAAGATCTGCCGCTTATaGTTGACGACCCTGTGCCCCCTTCTAACTGGGACATCTGAGCAA +
Preference number: 6 (lower is better)
Translates to: SDLCSMCCVEKICRL*LTTLCPLLTGTSEQ
Trigger: TTGCTCAGATGTCCCAGTTAGAAGGGGGCACAGGGTCGTCAACAATAAGCGGCAGATCTTCTCCACACAGCACATACTACATAGGTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp AGCTTCAAGTCTGTCTGGAAGAGACTAGGCCGTTCTGAAGACTTCTaGCCTGGGAGCAGCTTACTACCTGACTGGTCGGATTTCTCATCT +
Preference number: 6 (lower is better)
Translates to: SFKSVWKRLGRSEDF*PGSSLLPDWSDFSS
Trigger: AGATGAGAAATCCGACCAGTCAGGTAGTAAGCTGCTCCCAGGCAAGAAGTCTTCAGAACGGCCTAGTCTCTTCCAGACAGACTTGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp ATAGGCTCGACGCTGTGCTCTGGAGACTTAGCCACTCTCTCTGCTTaGCCTTCGGCCTTTTTATCCTTATCATCTTTGAGCAGTGGGGTA +
Preference number: 6 (lower is better)
Translates to: IGSTLCSGDLATLSA*PSAFLSLSSLSSGV
Trigger: TACCCCACTGCTCAAAGATGATAAGGATAAAAAGGCCGAAGGCAAAGCAGAGAGAGTGGCTAAGTCTCCAGAGCACAGCGTCGAGCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS TCA 72 bp ACACTGTACAAACCAGTGACACTTGGGTTGGCACCATaGGAAAGAAGCAACTCCACAACATCCGTCCTGCCT +
Preference number: 6 (lower is better)
Translates to: TLYKPVTLGLAP*ERSNSTTSVLP
Trigger: AGGCAGGACGGATGTTGTGGAGTTGCTTCTTTCTCATGGTGCCAACCCAAGTGTCACTGGTTTGTACAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS TCA 72 bp CTCTGGGCAAACTCGTTTTTACTGATGAACGTGAGATaGGATGTTGGGAACCGCCAGGGTAATACCTTGGCG +
Preference number: 6 (lower is better)
Translates to: LWANSFLLMNVR*DVGNRQGNTLA
Trigger: CGCCAAGGTATTACCCTGGCGGTTCCCAACATCTCATCTCACGTTCATCAGTAAAAACGAGTTTGCCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 72 bp TTTTCTTGTCTTCCGAGCAAATGGACATCCGAGCTATaGCAGGATCTTGCAGGCCACTCAGACTGTGTGGCA +
Preference number: 6 (lower is better)
Translates to: FSCLPSKWTSEL*QDLAGHSDCVA
Trigger: TGCCACACAGTCTGAGTGGCCTGCAAGATCCTGTCATAGCTCGGATGTCCATTTGCTCGGAAGACAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 72 bp GGTATGTTCACGTATGTTCCGGCGTCCAACAGGTCCTaGACAATTTCTATATGTCCCTCCTTCGACGCAATC +
Preference number: 6 (lower is better)
Translates to: GMFTYVPASNRS*TISICPSFDAI
Trigger: GATTGCGTCGAAGGAGGGACATATAGAAATTGTGCAGGACCTGTTGGACGCCGGAACATACGTGAACATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp TCTGACCTATGTAGTATGTGCTGTGTGGAGAAGATCTaGCGCTTATTGTTGACGACCCTGTGCCCCCTTCTA +
Preference number: 6 (lower is better)
Translates to: SDLCSMCCVEKI*RLLLTTLCPLL
Trigger: TAGAAGGGGGCACAGGGTCGTCAACAATAAGCGGCAGATCTTCTCCACACAGCACATACTACATAGGTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 72 bp TGGAGCCCCCTGAAGAACTCTGACCTATGTAGTATGTaGTGTGTGGAGAAGATCTGCCGCTTATTGTTGACG +
Preference number: 6 (lower is better)
Translates to: WSPLKNSDLCSM*CVEKICRLLLT
Trigger: CGTCAACAATAAGCGGCAGATCTTCTCCACACAGCACATACTACATAGGTCAGAGTTCTTCAGGGGGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 72 bp AGATTGGCCCCACACTTCAGCAGCTCTTCCACAATGTaGATGTGCCCCTCTTTAGATGCTGATATAAGCGCA +
Preference number: 6 (lower is better)
Translates to: RLAPHFSSSSTM*MCPSLDADISA
Trigger: TGCGCTTATATCAGCATCTAAAGAGGGGCACATCCACATTGTGGAAGAGCTGCTGAAGTGTGGGGCCAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 72 bp CCAGCAGCAGCTCCACCACTTCAATATTTCTCATCTTaGTGGCCTTTATTAGTGGTGTCTCGCCATCCTTCG +
Preference number: 6 (lower is better)
Translates to: PAAAPPLQYFSS*WPLLVVSRHPS
Trigger: CGAAGGATGGCGAGACACCACTAATAAAGGCCACCAAGATGAGAAATATTGAAGTGGTGGAGCTGCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CCA 72 bp CCTCTATCTCATCAAAGTTCTGATTGGCTCTGTTGGTaGGCGCAGTGTTGTTGTTCAGAGTCACAGTGCTGG +
Preference number: 6 (lower is better)
Translates to: PLSHQSSDWLCW*AQCCCSESQCW
Trigger: CCAGCACTGTGACTCTGAACAACAACACTGCGCCCACCAACAGAGCCAATCAGAACTTTGATGAGATAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CCA 72 bp CTCCCTCTATCTCATCAAAGTTCTGATTGGCTCTGTTaGTGGGCGCAGTGTTGTTGTTCAGAGTCACAGTGC +
Preference number: 6 (lower is better)
Translates to: LPLSHQSSDWLC*WAQCCCSESQC
Trigger: GCACTGTGACTCTGAACAACAACACTGCGCCCACCAACAGAGCCAATCAGAACTTTGATGAGATAGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 72 bp CTTGCAGCTCGAACATCTGCAATGATCTCCCGTAGTTaGGGATCCAGGTTTACCGTGCATGGCAAAAAGGTC +
Preference number: 6 (lower is better)
Translates to: LAARTSAMISRS*GSRFTVHGKKV
Trigger: GACCTTTTTGCCATGCACGGTAAACCTGGATCCCAAACTACGGGAGATCATTGCAGATGTTCGAGCTGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 72 bp TCATTGGACCTCACTCCCGAATCGGAGGAATCTTTCTaGTCGAGGAGGGCGTCCGACAAATACTCTTTTGCT +
Preference number: 6 (lower is better)
Translates to: SLDLTPESEESF*SRRASDKYSFA
Trigger: AGCAAAAGAGTATTTGTCGGACGCCCTCCTCGACAAGAAAGATTCCTCCGATTCGGGAGTGAGGTCCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS TCA 72 bp TGTAATTTGGAGGCAGCACTATGGAGGCGTTTTCTCTaGGAATTCAGGAGAGAGTCCAGCACTTGCCACCAT +
Preference number: 6 (lower is better)
Translates to: CNLEAALWRRFL*EFRRESSTCHH
Trigger: ATGGTGGCAAGTGCTGGACTCTCTCCTGAATTCTCAGAGAAAACGCCTCCATAGTGCTGCCTCCAAATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 72 bp GATGTTTCCCTGACTCCCTCTATCTCATCAAAGTTCTaGTTGGCTCTGTTGGTGGGCGCAGTGTTGTTGTTC +
Preference number: 6 (lower is better)
Translates to: DVSLTPSISSKF*LALLVGAVLLF
Trigger: GAACAACAACACTGCGCCCACCAACAGAGCCAATCAGAACTTTGATGAGATAGAGGGAGTCAGGGAAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 72 bp TCTCGCCATCCTTCGTGCATATTTCCGTATCAGGATTaGACTGCAGGATATCTCTCACCATTGTCGCATTGC +
Preference number: 6 (lower is better)
Translates to: SRHPSCIFPYQD*TAGYLSPLSHC
Trigger: GCAATGCGACAATGGTGAGAGATATCCTGCAGTGCAATCCTGATACGGAAATATGCACGAAGGATGGCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp TTTGCTTTGATGAATGTTCTGATAGGCTCGACGCTGTaGTCTGGAGACTTAGCCACTCTCTCTGCTTTGCCT +
Preference number: 6 (lower is better)
Translates to: FALMNVLIGSTL*SGDLATLSALP
Trigger: AGGCAAAGCAGAGAGAGTGGCTAAGTCTCCAGAGCACAGCGTCGAGCCTATCAGAACATTCATCAAAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 72 bp CCGTATCAGGATTGCACTGCAGGATATCTCTCACCATaGTCGCATTGCCTTTCTCAACAGCCCAATACAGTG +
Preference number: 6 (lower is better)
Translates to: PYQDCTAGYLSP*SHCLSQQPNTV
Trigger: CACTGTATTGGGCTGTTGAGAAAGGCAATGCGACAATGGTGAGAGATATCCTGCAGTGCAATCCTGATACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 72 bp GTCTCGCCATCCTTCGTGCATATTTCCGTATCAGGATaGCACTGCAGGATATCTCTCACCATTGTCGCATTG +
Preference number: 6 (lower is better)
Translates to: VSPSFVHISVSG*HCRISLTIVAL
Trigger: CAATGCGACAATGGTGAGAGATATCCTGCAGTGCAATCCTGATACGGAAATATGCACGAAGGATGGCGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 72 bp ACGCTGTGCTCTGGAGACTTAGCCACTCTCTCTGCTTaGCCTTCGGCCTTTTTATCCTTATCATCTTTGAGC +
Preference number: 6 (lower is better)
Translates to: TLCSGDLATLSA*PSAFLSLSSLS
Trigger: GCTCAAAGATGATAAGGATAAAAAGGCCGAAGGCAAAGCAGAGAGAGTGGCTAAGTCTCCAGAGCACAGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp GGAGAACTCTCATTGGACCTCACTCCCGAATCGGAGGAATCTTTCTaGTCGAGGAGGGCGTCCGACAAATACTCTTTTGCTTTGATGAAT +
Preference number: 6 (lower is better)
Translates to: GELSLDLTPESEESF*SRRASDKYSFALMN
Trigger: ATTCATCAAAGCAAAAGAGTATTTGTCGGACGCCCTCCTCGACAAGAAAGATTCCTCCGATTCGGGAGTGAGGTCCAATGAGAGTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp ATTAGTGGTGTCTCGCCATCCTTCGTGCATATTTCCGTATCAGGATaGCACTGCAGGATATCTCTCACCATTGTCGCATTGCCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: ISGVSPSFVHISVSG*HCRISLTIVALPFS
Trigger: TGAGAAAGGCAATGCGACAATGGTGAGAGATATCCTGCAGTGCAATCCTGATACGGAAATATGCACGAAGGATGGCGAGACACCACTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 90 bp GAATCTTTCTTGTCGAGGAGGGCGTCCGACAAATACTCTTTTGCTTaGATGAATGTTCTGATAGGCTCGACGCTGTGCTCTGGAGACTTA +
Preference number: 6 (lower is better)
Translates to: ESFLSRRASDKYSFA*MNVLIGSTLCSGDL
Trigger: TAAGTCTCCAGAGCACAGCGTCGAGCCTATCAGAACATTCATCAAAGCAAAAGAGTATTTGTCGGACGCCCTCCTCGACAAGAAAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS TCA 72 bp GTTCACGTTTGGATTCCTTTTCAGAATCTCCTTCACTaGCTGTGTGTAGCCCCCTTTCACTGCCACAATCAG +
Preference number: 6 (lower is better)
Translates to: VHVWIPFQNLLH*LCVAPFHCHNQ
Trigger: CTGATTGTGGCAGTGAAAGGGGGCTACACACAGTCAGTGAAGGAGATTCTGAAAAGGAATCCAAACGTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp CCATCCTTCGTGCATATTTCCGTATCAGGATTGCACTaGAGGATATCTCTCACCATTGTCGCATTGCCTTTC +
Preference number: 6 (lower is better)
Translates to: PSFVHISVSGLH*RISLTIVALPF
Trigger: GAAAGGCAATGCGACAATGGTGAGAGATATCCTGCAGTGCAATCCTGATACGGAAATATGCACGAAGGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp TGGTGGCCTTTATTAGTGGTGTCTCGCCATCCTTCGTaGATATTTCCGTATCAGGATTGCACTGCAGGATAT +
Preference number: 6 (lower is better)
Translates to: WWPLLVVSRHPS*IFPYQDCTAGY
Trigger: ATATCCTGCAGTGCAATCCTGATACGGAAATATGCACGAAGGATGGCGAGACACCACTAATAAAGGCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp ATGAGCCACGAGAACTGGAAAAGGGGCTCAATCTGCTaGCCTGCAAACGTCTTCATTTCATCTTCTAGTTTC +
Preference number: 6 (lower is better)
Translates to: MSHENWKRGSIC*PANVFISSSSF
Trigger: GAAACTAGAAGATGAAATGAAGACGTTTGCAGGGCAGCAGATTGAGCCCCTTTTCCAGTTCTCGTGGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp TCGACAGTTCAGCACAAAGGCCAACCCCACGATAGATaGAATGGATATGAGGATAGCATTCACTGTCAGATG +
Preference number: 6 (lower is better)
Translates to: STVQHKGQPHDR*NGYEDSIHCQM
Trigger: CATCTGACAGTGAATGCTATCCTCATATCCATTGCATCTATCGTGGGGTTGGCCTTTGTGCTGAACTGTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp TTTCTTGTCGAGGAGGGCGTCCGACAAATACTCTTTTaGTTTGATGAATGTTCTGATAGGCTCGACGCTGTG +
Preference number: 6 (lower is better)
Translates to: FLVEEGVRQILF*FDECSDRLDAV
Trigger: CACAGCGTCGAGCCTATCAGAACATTCATCAAAGCAAAAGAGTATTTGTCGGACGCCCTCCTCGACAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 72 bp GGGCTGTGTTTCCGTCCTTATCAGTCAGGTTCACGTTaGGATTCCTTTTCAGAATCTCCTTCACTGACTGTG +
Preference number: 6 (lower is better)
Translates to: GLCFRPYQSGSR*DSFSESPSLTV
Trigger: CACAGTCAGTGAAGGAGATTCTGAAAAGGAATCCAAACGTGAACCTGACTGATAAGGACGGAAACACAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 72 bp TTGGCTCTTAGTAGCCGCCCTGTCACCGAAACAATATaGAGTAACCGTCTCATGGTTTGTGGACTGATGTCA +
Preference number: 6 (lower is better)
Translates to: LALSSRPVTETI*SNRLMVCGLMS
Trigger: TGACATCAGTCCACAAACCATGAGACGGTTACTCAATATTGTTTCGGTGACAGGGCGGCTACTAAGAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 90 bp GCTGATATAAGCGCAGTCCAGTTATCCAGGTCTTCCAGGTTGCAGTaGGCTCCATTCTTAATGAGTTCTTTCACTATTTCCACATTGCCC +
Preference number: 6 (lower is better)
Translates to: ADISAVQLSRSSRLQ*APFLMSSFTISTLP
Trigger: GGGCAATGTGGAAATAGTGAAAGAACTCATTAAGAATGGAGCCAACTGCAACCTGGAAGACCTGGATAACTGGACTGCGCTTATATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp ATCTGTTCTCTTGCAGCTCGAACATCTGCAATGATCTCCCGTAGTTaGGGATCCAGGTTTACCGTGCATGGCAAAAAGGTCTTTACATCT +
Preference number: 6 (lower is better)
Translates to: ICSLAARTSAMISRS*GSRFTVHGKKVFTS
Trigger: AGATGTAAAGACCTTTTTGCCATGCACGGTAAACCTGGATCCCAAACTACGGGAGATCATTGCAGATGTTCGAGCTGCAAGAGAACAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 72 bp GCCCTGCAAACGTCTTCATTTCATCTTCTAGTTTCTTaGGTAAGAAGGACTTCCCACTTCCCCACTGTGCAT +
Preference number: 6 (lower is better)
Translates to: ALQTSSFHLLVS*VRRTSHFPTVH
Trigger: ATGCACAGTGGGGAAGTGGGAAGTCCTTCTTACTCAAGAAACTAGAAGATGAAATGAAGACGTTTGCAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 72 bp GCAGCATCCTCCTTGATTACCTCTAGGCCATTGTTCTaGTCTCTGGGCAAACTCGTTTTTACTGATGAACGT +
Preference number: 6 (lower is better)
Translates to: AASSLITSRPLF*SLGKLVFTDER
Trigger: ACGTTCATCAGTAAAAACGAGTTTGCCCAGAGATCAGAACAATGGCCTAGAGGTAATCAAGGAGGATGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066652.7
CDS TCA 72 bp CTGCTTTGCCTTCGGCCTTTTTATCCTTATCATCTTTaGGCAGTGGGGTATTATCTGACTCTTCTGTCCCAG +
Preference number: 6 (lower is better)
Translates to: LLCLRPFYPYHL*AVGYYLTLLSQ
Trigger: CTGGGACAGAAGAGTCAGATAATACCCCACTGCTCAAAGATGATAAGGATAAAAAGGCCGAAGGCAAAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS GCA 72 bp GATTGCACTGCAGGATATCTCTCACCATTGTCGCATTaGCTTTCTCAACAGCCCAATACAGTGCAGTCTTAT +
Preference number: 6 (lower is better)
Translates to: DCTAGYLSPLSH*LSQQPNTVQSY
Trigger: ATAAGACTGCACTGTATTGGGCTGTTGAGAAAGGCAATGCGACAATGGTGAGAGATATCCTGCAGTGCAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 72 bp AGCGCAGTCCAGTTATCCAGGTCTTCCAGGTTGCAGTaGGCTCCATTCTTAATGAGTTCTTTCACTATTTCC +
Preference number: 6 (lower is better)
Translates to: SAVQLSRSSRLQ*APFLMSSFTIS
Trigger: GGAAATAGTGAAAGAACTCATTAAGAATGGAGCCAACTGCAACCTGGAAGACCTGGATAACTGGACTGCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp ACCTTATCAGTAAGCTTTGAAATTTCAATACTGGAGTCCTGGGAATaGAGACTCGAGAGACTTGGGGTTCTGCGAGTTTGTGACTGCCAA +
Preference number: 6 (lower is better)
Translates to: TLSVSFEISILESWE*RLERLGVLRVCDCQ
Trigger: TTGGCAGTCACAAACTCGCAGAACCCCAAGTCTCTCGAGTCTCAATTCCCAGGACTCCAGTATTGAAATTTCAAAGCTTACTGATAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 90 bp TCCTTATCAGTAAGCTTTGAAATTTCAATACTGGAGTCCTGGGAATaGAGACTCGAGAGACTTGGGGTTCTGCGAGTTTGTGACTGCCAA +
Preference number: 6 (lower is better)
Translates to: SLSVSFEISILESWE*RLERLGVLRVCDCQ
Trigger: TTGGCAGTCACAAACTCGCAGAACCCCAAGTCTCTCGAGTCTCAATTCCCAGGACTCCAGTATTGAAATTTCAAAGCTTACTGATAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222481.2
CDS TCA 72 bp GCGTATTTTTGGAGAAGTGCTCGAACAATTTCAACATaGCCACCTCTCACAGCGCCAATCAATACAGTATCC +
Preference number: 6 (lower is better)
Translates to: AYFWRSARTIST*PPLTAPINTVS
Trigger: GGATACTGTATTGATTGGCGCTGTGAGAGGTGGTCATGTTGAAATTGTTCGAGCACTTCTCCAAAAATACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS GCA 72 bp CATTGTCGCATTGCCTTTCTCAACAGCCCAATACAGTaGAGTCTTATTGTCCTGCCCTCTAATGTCTATATC +
Preference number: 6 (lower is better)
Translates to: HCRIAFLNSPIQ*SLIVLPSNVYI
Trigger: GATATAGACATTAGAGGGCAGGACAATAAGACTGCACTGTATTGGGCTGTTGAGAAAGGCAATGCGACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 72 bp CACACCAAAGGAGTTGTTCCATACTTATCAGAGCAATaGACTTTCGCACCATTCTGCAGCAGAAGATGCACT +
Preference number: 6 (lower is better)
Translates to: HTKGVVPYLSEQ*TFAPFCSRRCT
Trigger: AGTGCATCTTCTGCTGCAGAATGGTGCGAAAGTCAATTGCTCTGATAAGTATGGAACAACTCCTTTGGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 72 bp GTAAGCTTTGAAATTTCAATACTGGAGTCCTGGGAATaGAGACTCGAGAGACTTGGGGTTCTGCGAGTTTGT +
Preference number: 6 (lower is better)
Translates to: VSFEISILESWE*RLERLGVLRVC
Trigger: ACAAACTCGCAGAACCCCAAGTCTCTCGAGTCTCAATTCCCAGGACTCCAGTATTGAAATTTCAAAGCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222481.2
ENSMUST00000222941.2
CDS CAA 90 bp TGCAGTCTTATTGTCCTGCCCTCTAATGTCTATATCAGCGTATTTTaGGAGAAGTGCTCGAACAATTTCAACATGACCACCTCTCACAGC +
Preference number: 6 (lower is better)
Translates to: CSLIVLPSNVYISVF*EKCSNNFNMTTSHS
Trigger: GCTGTGAGAGGTGGTCATGTTGAAATTGTTCGAGCACTTCTCCAAAAATACGCTGATATAGACATTAGAGGGCAGGACAATAAGACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 72 bp ACACCAAAGGAGTTGTTCCATACTTATCAGAGCAATTaGCTTTCGCACCATTCTGCAGCAGAAGATGCACTA +
Preference number: 6 (lower is better)
Translates to: TPKELFHTYQSN*LSHHSAAEDAL
Trigger: TAGTGCATCTTCTGCTGCAGAATGGTGCGAAAGTCAATTGCTCTGATAAGTATGGAACAACTCCTTTGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS TCA 72 bp TTGTTAAACCCAGAGTCACACAGTAGGCCATTGTTCTaGTCTCTGGGCAAACTCGTTTTTACTGATGAACGT +
Preference number: 6 (lower is better)
Translates to: LLNPESHSRPLF*SLGKLVFTDER
Trigger: ACGTTCATCAGTAAAAACGAGTTTGCCCAGAGATCAGAACAATGGCCTACTGTGTGACTCTGGGTTTAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222941.2
CDS GCA 72 bp CCCTCTAATGTCTATATCAGCGTATTTTTGGAGAAGTaGTCGAACAATTTCAACATGACCACCTCTCACAGC +
Preference number: 6 (lower is better)
Translates to: PSNVYISVFLEK*SNNFNMTTSHS
Trigger: GCTGTGAGAGGTGGTCATGTTGAAATTGTTCGAGCACTTCTCCAAAAATACGCTGATATAGACATTAGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 72 bp GCACTCCTGTTGCTTCTGAGCACGAAATGTCCCCATTaGTTGCTGAAGTTACAAGAAATTTTCTTGCATTGC +
Preference number: 6 (lower is better)
Translates to: ALLLLLSTKCPH*LLKLQEIFLHC
Trigger: GCAATGCAAGAAAATTTCTTGTAACTTCAGCAACAAATGGGGACATTTCGTGCTCAGAAGCAACAGGAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 90 bp TTAGATGCTGATATAAGCGCAGTCCAGTTATCCAGGTCTTCCAGGTaGCAGTTGGCTCCATTCTTAATGAGTTCTTTCACTATTTCCACA +
Preference number: 6 (lower is better)
Translates to: LDADISAVQLSRSSR*QLAPFLMSSFTIST
Trigger: TGTGGAAATAGTGAAAGAACTCATTAAGAATGGAGCCAACTGCAACCTGGAAGACCTGGATAACTGGACTGCGCTTATATCAGCATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS TCA 72 bp ATCTCTATACTCGGCCTGCACCTTATCAGTAAGCTTTaGAATTTCAATACTGGAGTCCTGGGAATTGAGACT +
Preference number: 6 (lower is better)
Translates to: ISILGLHLISKL*NFNTGVLGIET
Trigger: AGTCTCAATTCCCAGGACTCCAGTATTGAAATTTCAAAGCTTACTGATAAGGTGCAGGCCGAGTATAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222941.2
CDS CAA 72 bp ATTGTCCTGCCCTCTAATGTCTATATCAGCGTATTTTaGGAGAAGTGCTCGAACAATTTCAACATGACCACC +
Preference number: 6 (lower is better)
Translates to: IVLPSNVYISVF*EKCSNNFNMTT
Trigger: GGTGGTCATGTTGAAATTGTTCGAGCACTTCTCCAAAAATACGCTGATATAGACATTAGAGGGCAGGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CCA 72 bp AATGGATATGAGGATAGCATTCACTGTCAGATGTTTTaGGTCAACTCGGAATATAGCCAAAAGAGTAATTCC +
Preference number: 6 (lower is better)
Translates to: NGYEDSIHCQMF*VNSEYSQKSNS
Trigger: GGAATTACTCTTTTGGCTATATTCCGAGTTGACCCAAAACATCTGACAGTGAATGCTATCCTCATATCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CCA 72 bp ATTCAGGTTCTGGTTGATGGCCTTTATAATAATATGTaGATCACTTGCAAAAATGGCAATAAAAGGGCCCTT +
Preference number: 6 (lower is better)
Translates to: IQVLVDGLYNNM*ITCKNGNKRAL
Trigger: AAGGGCCCTTTTATTGCCATTTTTGCAAGTGATCCACATATTATTATAAAGGCCATCAACCAGAACCTGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 90 bp TGTCCATTTATATTTGAATCACGAAGCACACTATTCAGGTTCTGGTaGATGGCCTTTATAATAATATGTGGATCACTTGCAAAAATGGCA +
Preference number: 6 (lower is better)
Translates to: CPFIFESRSTLFRFW*MAFIIICGSLAKMA
Trigger: TGCCATTTTTGCAAGTGATCCACATATTATTATAAAGGCCATCAACCAGAACCTGAATAGTGTGCTTCGTGATTCAAATATAAATGGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS CAA 72 bp ATATTTGAATCACGAAGCACACTATTCAGGTTCTGGTaGATGGCCTTTATAATAATATGTGGATCACTTGCA +
Preference number: 6 (lower is better)
Translates to: IFESRSTLFRFW*MAFIIICGSLA
Trigger: TGCAAGTGATCCACATATTATTATAAAGGCCATCAACCAGAACCTGAATAGTGTGCTTCGTGATTCAAATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2
CDS TCA 72 bp AACTATATTGCGCATATAGTCATGTCCATTTATATTTaGATCACGAAGCACACTATTCAGGTTCTGGTTGAT +
Preference number: 6 (lower is better)
Translates to: NYIAHIVMSIYI*ITKHTIQVLVD
Trigger: ATCAACCAGAACCTGAATAGTGTGCTTCGTGATTCAAATATAAATGGACATGACTATATGCGCAATATAGTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066652.7
ENSMUST00000220459.2
ENSMUST00000222013.2
ENSMUST00000222941.2