Pregenerated sensors for KHNYN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047153Ensembl transcript IDs: ENSMUST00000022831.5, ENSMUST00000228462.2
Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CGGCAGTACGGTTCCCGCTGCAGGATGAAGTCCACCTTGTGGTCCTaGCCCCAAAACACTTCGAGCAGCTGGCGCCGCAGCCGCTCTGTC | + |
Preference number: 1 (lower is better) Translates to: RQYGSRCRMKSTLWS*PQNTSSSWRRSRSV Trigger: GACAGAGCGGCTGCGGCGCCAGCTGCTCGAAGTGTTTTGGGGTCAGGACCACAAGGTGGACTTCATCCTGCAGCGGGAACCGTACTGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 90 bp | CATGTACCACCTCTCTACTTTAGGGGTTGTGCTGGGCCGTGGAGGTaGCGCCATCAGTCACATGCTTCTGCCCTTCCGCCTGGGCCTAGG | + |
Preference number: 1 (lower is better) Translates to: HVPPLYFRGCAGPWR*RHQSHASALPPGPR Trigger: CCTAGGCCCAGGCGGAAGGGCAGAAGCATGTGACTGATGGCGCCACCTCCACGGCCCAGCACAACCCCTAAAGTAGAGAGGTGGTACATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 90 bp | AGCCTCCATGTACCACCTCTCTACTTTAGGGGTTGTGCTGGGCCGTaGAGGTGGCGCCATCAGTCACATGCTTCTGCCCTTCCGCCTGGG | + |
Preference number: 1 (lower is better) Translates to: SLHVPPLYFRGCAGP*RWRHQSHASALPPG Trigger: CCCAGGCGGAAGGGCAGAAGCATGTGACTGATGGCGCCACCTCCACGGCCCAGCACAACCCCTAAAGTAGAGAGGTGGTACATGGAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR GCA 90 bp | CCTGTGGAAACCCAAAGGGCAGAGGAGACTGAGGCTAAGGAGCCTTaGACTACAAAGGGCCCAGCAGGCCAGGGACCGCCAGAGCAAACA | + |
Preference number: 1 (lower is better) Translates to: PVETQRAEETEAKEP*TTKGPAGQGPPEQT Trigger: TGTTTGCTCTGGCGGTCCCTGGCCTGCTGGGCCCTTTGTAGTGCAAGGCTCCTTAGCCTCAGTCTCCTCTGCCCTTTGGGTTTCCACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR TCA 90 bp | GTTCTGGCTAGGGAGCCTGAACAGCCAGCCACAGGCAGACACGCCTaGGCCATGACCCAAGTACAGGTCCTCATGGGAGCCTTCTCTGTT | + |
Preference number: 1 (lower is better) Translates to: VLAREPEQPATGRHA*AMTQVQVLMGAFSV Trigger: AACAGAGAAGGCTCCCATGAGGACCTGTACTTGGGTCATGGCTCAGGCGTGTCTGCCTGTGGCTGGCTGTTCAGGCTCCCTAGCCAGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR CCA 90 bp | GCTGTTGGAAGGGCAAAAAGTGGTCCCTCGGCGGACACTGGCTACTaGCTACCAGTACTCCTTCCCAGAGCTGAGGGCTGCCTTGAAGGA | + |
Preference number: 1 (lower is better) Translates to: AVGRAKSGPSADTGY*LPVLLPRAEGCLEG Trigger: TCCTTCAAGGCAGCCCTCAGCTCTGGGAAGGAGTACTGGTAGCCAGTAGCCAGTGTCCGCCGAGGGACCACTTTTTGCCCTTCCAACAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR GCA 90 bp | CTGGAAGCCTGCCCACCTCTGCCTTCTGGTTCTCAACTAGCCCACTaGAACAGCCCACGTAGCGCTATGACCCCTCTGGGAGTCAGTATT | + |
Preference number: 1 (lower is better) Translates to: LEACPPLPSGSQLAH*NSPRSAMTPLGVSI Trigger: AATACTGACTCCCAGAGGGGTCATAGCGCTACGTGGGCTGTTGCAGTGGGCTAGTTGAGAACCAGAAGGCAGAGGTGGGCAGGCTTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR GCA 90 bp | CAACTCTGTCAAGGTCACAGGCAGGCACAGCTGAGACTGGAAGCCTaGCCACCTCTGCCTTCTGGTTCTCAACTAGCCCACTGCAACAGC | + |
Preference number: 1 (lower is better) Translates to: QLCQGHRQAQLRLEA*PPLPSGSQLAHCNS Trigger: GCTGTTGCAGTGGGCTAGTTGAGAACCAGAAGGCAGAGGTGGGCAGGCTTCCAGTCTCAGCTGTGCCTGCCTGTGACCTTGACAGAGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR GCA 90 bp | GACACTGGCTACTGGCTACCAGTACTCCTTCCCAGAGCTGAGGGCTaGCTTGAAGGATGTTGTAGCCTGAGCAGAGAAGGAGCCCCAAGG | + |
Preference number: 1 (lower is better) Translates to: DTGYWLPVLLPRAEG*LEGCCSLSREGAPR Trigger: CCTTGGGGCTCCTTCTCTGCTCAGGCTACAACATCCTTCAAGGCAGCCCTCAGCTCTGGGAAGGAGTACTGGTAGCCAGTAGCCAGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR GCA 90 bp | TCCCCAGCACTGTGGTACGAGCGGTCTTTGGAGAACGTGCCATCATaGTGTTGGAAGGGCAAAAAGTGGTCCCTCGGCGGACACTGGCTA | + |
Preference number: 1 (lower is better) Translates to: SPALWYERSLENVPS*CWKGKKWSLGGHWL Trigger: TAGCCAGTGTCCGCCGAGGGACCACTTTTTGCCCTTCCAACAGCATGATGGCACGTTCTCCAAAGACCGCTCGTACCACAGTGCTGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 90 bp | GCACTGTGGTACGAGCGGTCTTTGGAGAACGTGCCATCATGCTGTTaGAAGGGCAAAAAGTGGTCCCTCGGCGGACACTGGCTACTGGCT | + |
Preference number: 1 (lower is better) Translates to: ALWYERSLENVPSCC*KGKKWSLGGHWLLA Trigger: AGCCAGTAGCCAGTGTCCGCCGAGGGACCACTTTTTGCCCTTCCAACAGCATGATGGCACGTTCTCCAAAGACCGCTCGTACCACAGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR TCA 90 bp | CTAGGGAGCCTGAACAGCCAGCCACAGGCAGACACGCCTGAGCCATaGCCCAAGTACAGGTCCTCATGGGAGCCTTCTCTGTTCTCATTT | + |
Preference number: 1 (lower is better) Translates to: LGSLNSQPQADTPEP*PKYRSSWEPSLFSF Trigger: AAATGAGAACAGAGAAGGCTCCCATGAGGACCTGTACTTGGGTCATGGCTCAGGCGTGTCTGCCTGTGGCTGGCTGTTCAGGCTCCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR CCA 90 bp | CCCAGCCTTCATACCTGTCCCCAGCACTGTGGTACGAGCGGTCTTTaGAGAACGTGCCATCATGCTGTTGGAAGGGCAAAAAGTGGTCCC | + |
Preference number: 1 (lower is better) Translates to: PSLHTCPQHCGTSGL*RTCHHAVGRAKSGP Trigger: GGGACCACTTTTTGCCCTTCCAACAGCATGATGGCACGTTCTCCAAAGACCGCTCGTACCACAGTGCTGGGGACAGGTATGAAGGCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 90 bp | GGCAGAAAGGCTCAGAAGTTGAGACTCAGCAGGGCCTCAGAAAGCTaGTTAATATCCCGGCAGTACGGTTCCCGCTGCAGGATGAAGTCC | + |
Preference number: 1 (lower is better) Translates to: GRKAQKLRLSRASES*LISRQYGSRCRMKS Trigger: GGACTTCATCCTGCAGCGGGAACCGTACTGCCGGGATATTAACCAGCTTTCTGAGGCCCTGCTGAGTCTCAACTTCTGAGCCTTTCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 90 bp | CTGGGCCTAGGAGGCCCCATCGGTTCAGGTCGCCAATTCTTCCCCTaGATACACATTGGTGACCTGGCAGGAATTCTGAACTATGCCCTT | + |
Preference number: 1 (lower is better) Translates to: LGLGGPIGSGRQFFP*IHIGDLAGILNYAL Trigger: AAGGGCATAGTTCAGAATTCCTGCCAGGTCACCAATGTGTATCCAGGGGAAGAATTGGCGACCTGAACCGATGGGGCCTCCTAGGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR GCA 90 bp | CAGCCTTCCAGGGCACTCAGGGAAGGGAAGATAACCCCAGCCTTCTaGATACCCACCATCATGGCAAGAGAAAAGAGAAGACACCAATCC | + |
Preference number: 1 (lower is better) Translates to: QPSRALREGKITPAF*IPTIMAREKRRHQS Trigger: GGATTGGTGTCTTCTCTTTTCTCTTGCCATGATGGTGGGTATGCAGAAGGCTGGGGTTATCTTCCCTTCCCTGAGTGCCCTGGAAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 90 bp | CAGAGAAGCTCAAGGGGGAAACAGTTATGGTTCTTTCTTCTCCTGTaGAAACCCAAAGGGCAGAGGAGACTGAGGCTAAGGAGCCTTGCA | + |
Preference number: 1 (lower is better) Translates to: QRSSRGKQLWFFLLL*KPKGQRRLRLRSLA Trigger: TGCAAGGCTCCTTAGCCTCAGTCTCCTCTGCCCTTTGGGTTTCCACAGGAGAAGAAAGAACCATAACTGTTTCCCCCTTGAGCTTCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR TCA 90 bp | AAGGTTGCTGAAAAGGGATGCAGCCATTTACAGGGCATGTTCTACTaGAAGCCCAGCGTTAACATCGAGGGAGTGGACAGTGGACATCTC | + |
Preference number: 1 (lower is better) Translates to: KVAEKGCSHLQGMFY*KPSVNIEGVDSGHL Trigger: GAGATGTCCACTGTCCACTCCCTCGATGTTAACGCTGGGCTTTCAGTAGAACATGCCCTGTAAATGGCTGCATCCCTTTTCAGCAACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR CCA 90 bp | TGTTCAGGCATGGACACACAGAGAAGCTCAAGGGGGAAACAGTTATaGTTCTTTCTTCTCCTGTGGAAACCCAAAGGGCAGAGGAGACTG | + |
Preference number: 1 (lower is better) Translates to: CSGMDTQRSSRGKQL*FFLLLWKPKGQRRL Trigger: CAGTCTCCTCTGCCCTTTGGGTTTCCACAGGAGAAGAAAGAACCATAACTGTTTCCCCCTTGAGCTTCTCTGTGTGTCCATGCCTGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR GCA 90 bp | TACCCCAGGCAAAGAGTATTCCCACACTCAAATTCTCTTCTCTGGTaGTTCCTCTGGCCAAAGCACCATCTTAGAGTGGGTCTAGGTCAT | + |
Preference number: 1 (lower is better) Translates to: YPRQRVFPHSNSLLW*FLWPKHHLRVGLGH Trigger: ATGACCTAGACCCACTCTAAGATGGTGCTTTGGCCAGAGGAAGCACCAGAGAAGAGAATTTGAGTGTGGGAATACTCTTTGCCTGGGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR CCA 90 bp | CAAAGAGTATTCCCACACTCAAATTCTCTTCTCTGGTGCTTCCTCTaGCCAAAGCACCATCTTAGAGTGGGTCTAGGTCATGGTCTGAGC | + |
Preference number: 1 (lower is better) Translates to: QRVFPHSNSLLWCFL*PKHHLRVGLGHGLS Trigger: GCTCAGACCATGACCTAGACCCACTCTAAGATGGTGCTTTGGCCAGAGGAAGCACCAGAGAAGAGAATTTGAGTGTGGGAATACTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR TCA 90 bp | ACTAAGTCAGAGCTAGAAAGGCATCTAATTCAGGGACTTGCTACATaGACCCAGTGGCACCTGCCTTACCTTTTTATACCTCTACCCGAC | + |
Preference number: 1 (lower is better) Translates to: TKSELERHLIQGLAT*TQWHLPYLFIPLPD Trigger: GTCGGGTAGAGGTATAAAAAGGTAAGGCAGGTGCCACTGGGTTCATGTAGCAAGTCCCTGAATTAGATGCCTTTCTAGCTCTGACTTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR TCA 90 bp | CCCCTAATCAACTTGTCCCCAACACCTAATCAATCTGGTGTGAAATaGAAATCACCCAAGGAAACAGACAAAGACACTGGGACCCAGAGA | + |
Preference number: 1 (lower is better) Translates to: PLINLSPTPNQSGVK*KSPKETDKDTGTQR Trigger: TCTCTGGGTCCCAGTGTCTTTGTCTGTTTCCTTGGGTGATTTTCATTTCACACCAGATTGATTAGGTGTTGGGGACAAGTTGATTAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR TCA 90 bp | GGAGCCTTCTCTGTTCTCATTTCCCTCAACGGTTATCTTTATGCCTaGTGTGTAGACATAAGTAAAGGCCAAGCAACTCTGTCAAGGTCA | + |
Preference number: 1 (lower is better) Translates to: GAFSVLISLNGYLYA*CVDISKGQATLSRS Trigger: TGACCTTGACAGAGTTGCTTGGCCTTTACTTATGTCTACACATCAGGCATAAAGATAACCGTTGAGGGAAATGAGAACAGAGAAGGCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR TCA 90 bp | TTAAGTAATGCAGCCATCCACCCTAACTTGCCTATTTTGATAACGTaGGTTTCGAAGGTTGCTGAAAAGGGATGCAGCCATTTACAGGGC | + |
Preference number: 1 (lower is better) Translates to: LSNAAIHPNLPILIT*VSKVAEKGCSHLQG Trigger: GCCCTGTAAATGGCTGCATCCCTTTTCAGCAACCTTCGAAACTCACGTTATCAAAATAGGCAAGTTAGGGTGGATGGCTGCATTACTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR TCA 90 bp | ACTGGCTTCCGCTGTCTCTTTGGCTTATATTCCCCTAGAATTATCTaGAGAACTATTACCCTACATGGCTCTTCTCCTAAGCTGGGTTCT | + |
Preference number: 1 (lower is better) Translates to: TGFRCLFGLYSPRII*RTITLHGSSPKLGS Trigger: AGAACCCAGCTTAGGAGAAGAGCCATGTAGGGTAATAGTTCTTCAGATAATTCTAGGGGAATATAAGCCAAAGAGACAGCGGAAGCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 90 bp | CACCTCTTCAACTTCTTCTGTGGCTTCTGTGTTACATTGTTGCCCTaGTTCTCATATATGCTGTGTAGACAATGTTCTACAGTTATGGCA | + |
Preference number: 1 (lower is better) Translates to: HLFNFFCGFCVTLLP*FSYMLCRQCSTVMA Trigger: TGCCATAACTGTAGAACATTGTCTACACAGCATATATGAGAACCAGGGCAACAATGTAACACAGAAGCCACAGAAGAAGTTGAAGAGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR GCA 90 bp | ACCTTCACCTCTTCAACTTCTTCTGTGGCTTCTGTGTTACATTGTTaGCCTGGTTCTCATATATGCTGTGTAGACAATGTTCTACAGTTA | + |
Preference number: 1 (lower is better) Translates to: TFTSSTSSVASVLHC*PGSHICCVDNVLQL Trigger: TAACTGTAGAACATTGTCTACACAGCATATATGAGAACCAGGGCAACAATGTAACACAGAAGCCACAGAAGAAGTTGAAGAGGTGAAGGT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR TCA 90 bp | CGGCGGACACTGGCTACTGGCTACCAGTACTCCTTCCCAGAGCTGAGGGCTGCCGTTCCCGCTGCAGGATaGAGTCCACCTTGTGGTCCT | + |
Preference number: 2 (lower is better) Translates to: RRTLATGYQYSFPELRAAVPAAG*SPPCGP Trigger: AGGACCACAAGGTGGACTTCATCCTGCAGCGGGAAC...GGCAGCCCTCAGCTCTGGGAAGGAGTACTGGTAGCCAGTAGCCAGTGTCCGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR GCA 90 bp | CGGCGGACACTGGCTACTGGCTACCAGTACTCCTTCCCAGAGCTGAGGGCTGCCCTGAGACTGGAAGCCTaGCCACCTCTGCCTTCTGGT | + |
Preference number: 2 (lower is better) Translates to: RRTLATGYQYSFPELRAALRLEA*PPLPSG Trigger: ACCAGAAGGCAGAGGTGGGCAGGCTTCCAGTCTCAG...GGCAGCCCTCAGCTCTGGGAAGGAGTACTGGTAGCCAGTAGCCAGTGTCCGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR CCA 90 bp | CCGCCTGGGCCTAGGAGGCCCCATCGGTTCAGGTCGCCAATTCTTCCCCTGGATCCAAGGAGTCCTGAATaGAGTGGCTCCAGCATCTAC | + |
Preference number: 2 (lower is better) Translates to: PPGPRRPHRFRSPILPLDPRSPE*SGSSIY Trigger: GTAGATGCTGGAGCCACTCCATTCAGGACTCCTTGG...ATCCAGGGGAAGAATTGGCGACCTGAACCGATGGGGCCTCCTAGGCCCAGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR TCA 90 bp | CCAAATGGGAAGCAGCAGCCAGGCTTCCTGGAGAGTCTACACGCCAGGTCGTGGTCCACCTTGTGGTCCTaGCCCCAAAACACTTCGAGC | + |
Preference number: 2 (lower is better) Translates to: PNGKQQPGFLESLHARSWSTLWS*PQNTSS Trigger: GCTCGAAGTGTTTTGGGGTCAGGACCACAAGGTGGA...CCACGACCTGGCGTGTAGACTCTCCAGGAAGCCTGGCTGCTGCTTCCCATTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CAA 90 bp | AGCACTGTGGTACGAGCGGTCTTTGGAGAACGTGCCATCATGCTGTaGGAAGGGCAAAAAGTGGTCCCTCGGCGGACACTGGCTACTGGC | + |
Preference number: 2 (lower is better) Translates to: STVVRAVFGERAIML*EGQKVVPRRTLATG Trigger: GCCAGTAGCCAGTGTCCGCCGAGGGACCACTTTTTGCCCTTCCAACAGCATGATGGCACGTTCTCCAAAGACCGCTCGTACCACAGTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR TCA 90 bp | CCTTCATACCTGTCCCCAGCACTGTGGTACGAGCGGTCTTTGGAGAACGTGCCACAGGGACTTGCTACATaGACCCAGTGGCACCTGCCT | + |
Preference number: 2 (lower is better) Translates to: PSYLSPALWYERSLENVPQGLAT*TQWHLP Trigger: AGGCAGGTGCCACTGGGTTCATGTAGCAAGTCCCTG...TGGCACGTTCTCCAAAGACCGCTCGTACCACAGTGCTGGGGACAGGTATGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR GCA 90 bp | CCAAATGGGAAGCAGCAGCCAGGCTTCCTGGAGAGTCTACACGCCAGGTCGTGGATAGGGCAGCAGCTATaGAGGGCAGAAAGGCTCAGA | + |
Preference number: 2 (lower is better) Translates to: PNGKQQPGFLESLHARSWIGQQL*RAERLR Trigger: TCTGAGCCTTTCTGCCCTGCATAGCTGCTGCCCTAT...CCACGACCTGGCGTGTAGACTCTCCAGGAAGCCTGGCTGCTGCTTCCCATTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CAA 90 bp | GCCCAGCCTTCATACCTGTCCCCAGCACTGTGGTACGAGCGGTCTTaGGAGAACGTGCCATCATGCTGTTGGAAGGGCAAAAAGTGGTCC | + |
Preference number: 2 (lower is better) Translates to: AQPSYLSPALWYERS*ENVPSCCWKGKKWS Trigger: GGACCACTTTTTGCCCTTCCAACAGCATGATGGCACGTTCTCCAAAGACCGCTCGTACCACAGTGCTGGGGACAGGTATGAAGGCTGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR TCA 90 bp | TGTTGGAAGGGCAAAAAGTGGTCCCTCGGCGGACACTGGCTACTGGCTACCAGTGAAAGGCTCAGAAGTTaGGACTCAGCAGGGCCTCAG | + |
Preference number: 2 (lower is better) Translates to: CWKGKKWSLGGHWLLATSERLRS*DSAGPQ Trigger: CTGAGGCCCTGCTGAGTCTCAACTTCTGAGCCTTTC...ACTGGTAGCCAGTAGCCAGTGTCCGCCGAGGGACCACTTTTTGCCCTTCCAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR GCA 90 bp | GCCAGAGGGTGCTTTCTTTCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCCTGAGACTGGAAGCCTaGCCACCTCTGCCTTCTGGT | + |
Preference number: 2 (lower is better) Translates to: ARGCFLSQLSLFVASSLPLRLEA*PPLPSG Trigger: ACCAGAAGGCAGAGGTGGGCAGGCTTCCAGTCTCAG...GGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGAAAGAAAGCACCCTCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR-3UTR CCA 90 bp | GGTCGCCAATTCTTCCCCTGGATACACATTGGTGACCTGGCAGGAATTCTGAACAACACTTCGAGCAGCTaGCGCCGCAGCCGCTCTGTC | + |
Preference number: 2 (lower is better) Translates to: GRQFFPWIHIGDLAGILNNTSSS*RRSRSV Trigger: GACAGAGCGGCTGCGGCGCCAGCTGCTCGAAGTGTT...GTTCAGAATTCCTGCCAGGTCACCAATGTGTATCCAGGGGAAGAATTGGCGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR CCA 90 bp | GTGTGCCACCTTGCAGACAGTACATTCCCCGGCACAGACAGAGTTCAAACAGATAGGGCAGCAGGCCAGTaGCCAGAGAAGAGCTGGTTT | + |
Preference number: 2 (lower is better) Translates to: VCHLADSTFPGTDRVQTDRAAGQ*PEKSWF Trigger: AAACCAGCTCTTCTCTGGCCACTGGCCTGCTGCCCT...ATCTGTTTGAACTCTGTCTGTGCCGGGGAATGTACTGTCTGCAAGGTGGCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR CCA 90 bp | AGAGAAGACACCAATCCTAAGCTTAAAAGGCAGCTCTACCAGCCCCCAGTCCAGGGAACTCATCCAGGGTaGGGCCATTTCGTCCCAGTG | + |
Preference number: 2 (lower is better) Translates to: REDTNPKLKRQLYQPPVQGTHPG*GHFVPV Trigger: CACTGGGACGAAATGGCCCCACCCTGGATGAGTTCC...CTGGACTGGGGGCTGGTAGAGCTGCCTTTTAAGCTTAGGATTGGTGTCTTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CAA 90 bp | GACTCTAATAGGGCAGCAGCTATGCAGGGCAGAAAGGCTCAGAAGTaGAGACTCAGCAGGGCCTCAGAAAGCTGGTTAATATCCCGGCAG | + |
Preference number: 2 (lower is better) Translates to: DSNRAAAMQGRKAQK*RLSRASESWLISRQ Trigger: CTGCCGGGATATTAACCAGCTTTCTGAGGCCCTGCTGAGTCTCAACTTCTGAGCCTTTCTGCCCTGCATAGCTGCTGCCCTATTAGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR TCA 90 bp | GGTCTCTCATCTTCTCAGGAACACTCAGCCTTCCAGGGCACTCAGGGAAGGGAAAAGAACCCTGCTTCCTaGCTGGCTTCTTCAGGAACT | + |
Preference number: 2 (lower is better) Translates to: GLSSSQEHSAFQGTQGREKNPAS*LASSGT Trigger: AGTTCCTGAAGAAGCCAGTCAGGAAGCAGGGTTCTT...TTCCCTTCCCTGAGTGCCCTGGAAGGCTGAGTGTTCCTGAGAAGATGAGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR CCA 90 bp | CGAGGGAGTGGACAGTGGACATCTCTGAATGTGAAGTTCTGGCTAGGGAGCCTGCTCTGGTGCTTCCTCTaGCCAAAGCACCATCTTAGA | + |
Preference number: 2 (lower is better) Translates to: RGSGQWTSLNVKFWLGSLLWCFL*PKHHLR Trigger: TCTAAGATGGTGCTTTGGCCAGAGGAAGCACCAGAG...CAGGCTCCCTAGCCAGAACTTCACATTCAGAGATGTCCACTGTCCACTCCCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR-3UTR CCA 90 bp | GGTCTCTCATCTTCTCAGGAACACTCAGCCTTCCAGGGCACTCAGGGAAGGGAACTCTGGTGCTTCCTCTaGCCAAAGCACCATCTTAGA | + |
Preference number: 2 (lower is better) Translates to: GLSSSQEHSAFQGTQGRELWCFL*PKHHLR Trigger: TCTAAGATGGTGCTTTGGCCAGAGGAAGCACCAGAG...TTCCCTTCCCTGAGTGCCCTGGAAGGCTGAGTGTTCCTGAGAAGATGAGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CAA 90 bp | CCGGCTCGTCATACTGCAGTAAGATGTCAGTGTCCCTCTATAAGCTaGGTCTCTCATCTTCTCAGGAACACTCAGCCTTCCAGGGCACTC | + |
Preference number: 2 (lower is better) Translates to: PARHTAVRCQCPSIS*VSHLLRNTQPSRAL Trigger: GAGTGCCCTGGAAGGCTGAGTGTTCCTGAGAAGATGAGAGACCAAGCTTATAGAGGGACACTGACATCTTACTGCAGTATGACGAGCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR TCA 90 bp | TGTTGGAAGGGCAAAAAGTGGTCCCTCGGCGGACACTGGCTACTGGCTACCAGTAGTTTCGAAGGTTGCTaGAAAGGGATGCAGCCATTT | + |
Preference number: 2 (lower is better) Translates to: CWKGKKWSLGGHWLLATSSFEGC*KGMQPF Trigger: AAATGGCTGCATCCCTTTTCAGCAACCTTCGAAACT...ACTGGTAGCCAGTAGCCAGTGTCCGCCGAGGGACCACTTTTTGCCCTTCCAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
||
3UTR CAA 90 bp | CAAGGGCCTGGGAATCAGGCAACATGGACGATTCCTGGGCTGAGCTaGCAGGGAGAGGACACTATTACTTTAGCTAGCAGAGGGAAAAAT | + |
Preference number: 2 (lower is better) Translates to: QGPGNQATWTIPGLS*QGEDTITLASRGKN Trigger: ATTTTTCCCTCTGCTAGCTAAAGTAATAGTGTCCTCTCCCTGCAAGCTCAGCCCAGGAATCGTCCATGTTGCCTGATTCCCAGGCCCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
||
3UTR-3UTR GCA 90 bp | GTCCAGACCATTCTCTTCTTCTCCCTTGTCATTCCCCTAATCAACTTGTCCCCACAGTACGGTTCCCGCTaGAGGATGAAGTCCACCTTG | + |
Preference number: 2 (lower is better) Translates to: VQTILFFSLVIPLINLSPQYGSR*RMKSTL Trigger: CAAGGTGGACTTCATCCTGCAGCGGGAACCGTACTG...TGGGGACAAGTTGATTAGGGGAATGACAAGGGAGAAGAAGAGAATGGTCTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
||
3UTR-3UTR CCA 90 bp | TCAGGTCGCCAATTCTTCCCCTGGATACACATTGGTGACCTGGCAGGAATTCTGACCCTGCTTCCTGACTaGCTTCTTCAGGAACTCATC | + |
Preference number: 2 (lower is better) Translates to: SGRQFFPWIHIGDLAGILTLLPD*LLQELI Trigger: GATGAGTTCCTGAAGAAGCCAGTCAGGAAGCAGGGT...CAGAATTCCTGCCAGGTCACCAATGTGTATCCAGGGGAAGAATTGGCGACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
||
3UTR-3UTR TCA 90 bp | ACCCAAGGAAACAGACAAAGACACTGGGACCCAGAGAGCCACATAGTTAACTCCGTCATTTTAAGGACCTaGCCTCAAACTACCCCAGGC | + |
Preference number: 2 (lower is better) Translates to: TQGNRQRHWDPESHIVNSVILRT*PQTTPG Trigger: GCCTGGGGTAGTTTGAGGTCAGGTCCTTAAAATGAC...GGAGTTAACTATGTGGCTCTCTGGGTCCCAGTGTCTTTGTCTGTTTCCTTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
||
3UTR-3UTR TCA 90 bp | TTAACATCGAGGGAGTGGACAGTGGACATCTCTGAATGTGAAGTTCTGGCTAGGCCTTTAGAGGGCTGCTaGGTCTTAGAAGAACCCTGC | + |
Preference number: 2 (lower is better) Translates to: LTSREWTVDISECEVLARPLEGC*VLEEPC Trigger: GCAGGGTTCTTCTAAGACTCAGCAGCCCTCTAAAGG...CCTAGCCAGAACTTCACATTCAGAGATGTCCACTGTCCACTCCCTCGATGTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR GCA 90 bp | GTGTGCCACCTTGCAGACAGTACATTCCCCGGCACAGACAGAGTTCAAACAGATGTCTTAGAAGAACCCTaGTTCCTGACTGGCTTCTTC | + |
Preference number: 2 (lower is better) Translates to: VCHLADSTFPGTDRVQTDVLEEP*FLTGFF Trigger: GAAGAAGCCAGTCAGGAAGCAGGGTTCTTCTAAGAC...ATCTGTTTGAACTCTGTCTGTGCCGGGGAATGTACTGTCTGCAAGGTGGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
||
3UTR-3UTR TCA 90 bp | GTGTGCCACCTTGCAGACAGTACATTCCCCGGCACAGACAGAGTTCAAACAGATCACTTGAAATGCAACTaGGCAGCTGCCATTTATAGG | + |
Preference number: 2 (lower is better) Translates to: VCHLADSTFPGTDRVQTDHLKCN*AAAIYR Trigger: CCTATAAATGGCAGCTGCTCAGTTGCATTTCAAGTG...ATCTGTTTGAACTCTGTCTGTGCCGGGGAATGTACTGTCTGCAAGGTGGCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR-3UTR CCA 90 bp | GTGTGCCACCTTGCAGACAGTACATTCCCCGGCACAGACAGAGTTCAAACAGATTCAAATTCTCTTCTCTaGTGCTTCCTCTGGCCAAAG | + |
Preference number: 2 (lower is better) Translates to: VCHLADSTFPGTDRVQTDSNSLL*CFLWPK Trigger: CTTTGGCCAGAGGAAGCACCAGAGAAGAGAATTTGA...ATCTGTTTGAACTCTGTCTGTGCCGGGGAATGTACTGTCTGCAAGGTGGCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
||
3UTR-3UTR CCA 90 bp | TCAGGTCGCCAATTCTTCCCCTGGATACACATTGGTGACCTGGCAGGAATTCTGTCAAATTCTCTTCTCTaGTGCTTCCTCTGGCCAAAG | + |
Preference number: 2 (lower is better) Translates to: SGRQFFPWIHIGDLAGILSNSLL*CFLWPK Trigger: CTTTGGCCAGAGGAAGCACCAGAGAAGAGAATTTGA...CAGAATTCCTGCCAGGTCACCAATGTGTATCCAGGGGAAGAATTGGCGACCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
||
3UTR-3UTR CCA 90 bp | GTCCAGACCATTCTCTTCTTCTCCCTTGTCATTCCCCTAATCAACTTGTCCCCAAAACCTCCTAAGAGCTaGCTTCGTGGTCCTTCCTCA | + |
Preference number: 2 (lower is better) Translates to: VQTILFFSLVIPLINLSPKPPKS*LRGPSS Trigger: TGAGGAAGGACCACGAAGCCAGCTCTTAGGAGGTTT...TGGGGACAAGTTGATTAGGGGAATGACAAGGGAGAAGAAGAGAATGGTCTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR-3UTR CCA 90 bp | TCCATGACAGCTTACTACCAGCCAAGCCTGACTAAGGAGTATGATGAAGACAGCAGGGCCTCAGAAAGCTaGTTAATATCCCGGCAGTAC | + |
Preference number: 2 (lower is better) Translates to: SMTAYYQPSLTKEYDEDSRASES*LISRQY Trigger: GTACTGCCGGGATATTAACCAGCTTTCTGAGGCCCT...GCTGTCTTCATCATACTCCTTAGTCAGGCTTGGCTGGTAGTAAGCTGTCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR TCA 90 bp | ACCATTCTCTTCTTCTCCCTTGTCATTCCCCTAATCAACTTGTCCCCAACACCTGTCATTTTAAGGACCTaGCCTCAAACTACCCCAGGC | + |
Preference number: 2 (lower is better) Translates to: TILFFSLVIPLINLSPTPVILRT*PQTTPG Trigger: GCCTGGGGTAGTTTGAGGTCAGGTCCTTAAAATGAC...AGGTGTTGGGGACAAGTTGATTAGGGGAATGACAAGGGAGAAGAAGAGAATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR-3UTR CCA 90 bp | GTCCAGACCATTCTCTTCTTCTCCCTTGTCATTCCCCTAATCAACTTGTCCCCAAACAGACAAAGACACTaGGACCCAGAGAGCCACATA | + |
Preference number: 2 (lower is better) Translates to: VQTILFFSLVIPLINLSPNRQRH*DPESHI Trigger: TATGTGGCTCTCTGGGTCCCAGTGTCTTTGTCTGTT...TGGGGACAAGTTGATTAGGGGAATGACAAGGGAGAAGAAGAGAATGGTCTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR-3UTR CCA 90 bp | AGTAAGATGTCAGTGTCCCTCTATAAGCTTGGTCTCTCATCTTCTCAGGAACACGCCATTTCGTCCCAGTaGGTCATCTGGGACCATGAA | + |
Preference number: 2 (lower is better) Translates to: SKMSVSLYKLGLSSSQEHAISSQ*VIWDHE Trigger: TTCATGGTCCCAGATGACCCACTGGGACGAAATGGC...GTGTTCCTGAGAAGATGAGAGACCAAGCTTATAGAGGGACACTGACATCTTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR TCA 90 bp | TTATGGTTCTTTCTTCTCCTGTGGAAACCCAAAGGGCAGAGGAGACTGAGGCTATGTCACTGCCAAACATaGCATCGTGAGTTTGGTGAA | + |
Preference number: 2 (lower is better) Translates to: LWFFLLLWKPKGQRRLRLCHCQT*HREFGE Trigger: TTCACCAAACTCACGATGTCATGTTTGGCAGTGACA...TAGCCTCAGTCTCCTCTGCCCTTTGGGTTTCCACAGGAGAAGAAAGAACCATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR TCA 90 bp | ACAGCTTACTACCAGCCAAGCCTGACTAAGGAGTATGATGAAGACAGCCCAGGAACAGATACAGAGCAATaGCTTGTGGGAGTTAGAATG | + |
Preference number: 2 (lower is better) Translates to: TAYYQPSLTKEYDEDSPGTDTEQ*LVGVRM Trigger: CATTCTAACTCCCACAAGTCATTGCTCTGTATCTGT...TCCTGGGCTGTCTTCATCATACTCCTTAGTCAGGCTTGGCTGGTAGTAAGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR TCA 90 bp | TCTCATCTTCTCAGGAACACTCAGCCTTCCAGGGCACTCAGGGAAGGGAAGATACAATCTGGTGTGAAATaGAAATCACCCAAGGAAACA | + |
Preference number: 2 (lower is better) Translates to: SHLLRNTQPSRALREGKIQSGVK*KSPKET Trigger: TGTTTCCTTGGGTGATTTTCATTTCACACCAGATTG...TATCTTCCCTTCCCTGAGTGCCCTGGAAGGCTGAGTGTTCCTGAGAAGATGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR TCA 90 bp | GGGAGCCTTCTCTGTTCTCATTTCCCTCAACGGTTATCTTTATGCCTGATGTGTCACTTGAAATGCAACTaGGCAGCTGCCATTTATAGG | + |
Preference number: 2 (lower is better) Translates to: GSLLCSHFPQRLSLCLMCHLKCN*AAAIYR Trigger: CCTATAAATGGCAGCTGCTCAGTTGCATTTCAAGTG...ACACATCAGGCATAAAGATAACCGTTGAGGGAAATGAGAACAGAGAAGGCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR CAA 90 bp | AACCTTCACCTCTTCAACTTCTTCTGTGGCTTCTGTGTTACATTGTaGCCCTGGTTCTCATATATGCTGTGTAGACAATGTTCTACAGTT | + |
Preference number: 2 (lower is better) Translates to: NLHLFNFFCGFCVTL*PWFSYMLCRQCSTV Trigger: AACTGTAGAACATTGTCTACACAGCATATATGAGAACCAGGGCAACAATGTAACACAGAAGCCACAGAAGAAGTTGAAGAGGTGAAGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR GCA 72 bp | GGCGCCGCAGCCGCTCTGTCTCCCGGGTCTTCCGAATaGCACCATTGCTCCTGTCCGCGTCCTTCCCCTGCT | + |
Preference number: 3 (lower is better) Translates to: GAAAALSPGSSE*HHCSCPRPSPA Trigger: AGCAGGGGAAGGACGCGGACAGGAGCAATGGTGGCATTCGGAAGACCCGGGAGACAGAGCGGCTGCGGCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR TCA 72 bp | GGTTCCCGCTGCAGGATGAAGTCCACCTTGTGGTCCTaGCCCCAAAACACTTCGAGCAGCTGGCGCCGCAGC | + |
Preference number: 3 (lower is better) Translates to: GSRCRMKSTLWS*PQNTSSSWRRS Trigger: GCTGCGGCGCCAGCTGCTCGAAGTGTTTTGGGGTCAGGACCACAAGGTGGACTTCATCCTGCAGCGGGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR GCA 72 bp | ACCCAAAGGGCAGAGGAGACTGAGGCTAAGGAGCCTTaGACTACAAAGGGCCCAGCAGGCCAGGGACCGCCA | + |
Preference number: 3 (lower is better) Translates to: TQRAEETEAKEP*TTKGPAGQGPP Trigger: TGGCGGTCCCTGGCCTGCTGGGCCCTTTGTAGTGCAAGGCTCCTTAGCCTCAGTCTCCTCTGCCCTTTGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR TCA 72 bp | GCCCCAAGGCAGAAGCTGGGGCCTGCTCCCGCACTCTaGGAAGTGGGTCAGGTGATGATCCCTGCACTTGAT | + |
Preference number: 3 (lower is better) Translates to: APRQKLGPAPAL*EVGQVMIPALD Trigger: ATCAAGTGCAGGGATCATCACCTGACCCACTTCTCAGAGTGCGGGAGCAGGCCCCAGCTTCTGCCTTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR GCA 72 bp | GAGCAGAGAAGGAGCCCCAAGGCAGAAGCTGGGGCCTaGTCCCGCACTCTGAGAAGTGGGTCAGGTGATGAT | + |
Preference number: 3 (lower is better) Translates to: EQRRSPKAEAGA*SRTLRSGSGDD Trigger: ATCATCACCTGACCCACTTCTCAGAGTGCGGGAGCAGGCCCCAGCTTCTGCCTTGGGGCTCCTTCTCTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 72 bp | AGGGCAAAAAGTGGTCCCTCGGCGGACACTGGCTACTaGCTACCAGTACTCCTTCCCAGAGCTGAGGGCTGC | + |
Preference number: 3 (lower is better) Translates to: RAKSGPSADTGY*LPVLLPRAEGC Trigger: GCAGCCCTCAGCTCTGGGAAGGAGTACTGGTAGCCAGTAGCCAGTGTCCGCCGAGGGACCACTTTTTGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 72 bp | TGGGCCGCCCAGCCTTCATACCTGTCCCCAGCACTGTaGTACGAGCGGTCTTTGGAGAACGTGCCATCATGC | + |
Preference number: 3 (lower is better) Translates to: WAAQPSYLSPAL*YERSLENVPSC Trigger: GCATGATGGCACGTTCTCCAAAGACCGCTCGTACCACAGTGCTGGGGACAGGTATGAAGGCTGGGCGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 72 bp | CCTCTCTACTTTAGGGGTTGTGCTGGGCCGTGGAGGTaGCGCCATCAGTCACATGCTTCTGCCCTTCCGCCT | + |
Preference number: 3 (lower is better) Translates to: PLYFRGCAGPWR*RHQSHASALPP Trigger: AGGCGGAAGGGCAGAAGCATGTGACTGATGGCGCCACCTCCACGGCCCAGCACAACCCCTAAAGTAGAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 72 bp | CAGCCAGGCTTCCTGGAGAGTCTACACGCCAGGTCGTaGTACGTTCAGGTGAGGACCAAGGGCCTGGGAATC | + |
Preference number: 3 (lower is better) Translates to: QPGFLESLHARS*YVQVRTKGLGI Trigger: GATTCCCAGGCCCTTGGTCCTCACCTGAACGTACCACGACCTGGCGTGTAGACTCTCCAGGAAGCCTGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR TCA 72 bp | CTGAACAGCCAGCCACAGGCAGACACGCCTGAGCCATaGCCCAAGTACAGGTCCTCATGGGAGCCTTCTCTG | + |
Preference number: 3 (lower is better) Translates to: LNSQPQADTPEP*PKYRSSWEPSL Trigger: CAGAGAAGGCTCCCATGAGGACCTGTACTTGGGTCATGGCTCAGGCGTGTCTGCCTGTGGCTGGCTGTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR GCA 72 bp | TGCCCACCTCTGCCTTCTGGTTCTCAACTAGCCCACTaGAACAGCCCACGTAGCGCTATGACCCCTCTGGGA | + |
Preference number: 3 (lower is better) Translates to: CPPLPSGSQLAH*NSPRSAMTPLG Trigger: TCCCAGAGGGGTCATAGCGCTACGTGGGCTGTTGCAGTGGGCTAGTTGAGAACCAGAAGGCAGAGGTGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR GCA 72 bp | CAAGGTCACAGGCAGGCACAGCTGAGACTGGAAGCCTaGCCACCTCTGCCTTCTGGTTCTCAACTAGCCCAC | + |
Preference number: 3 (lower is better) Translates to: QGHRQAQLRLEA*PPLPSGSQLAH Trigger: GTGGGCTAGTTGAGAACCAGAAGGCAGAGGTGGGCAGGCTTCCAGTCTCAGCTGTGCCTGCCTGTGACCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR CCA 72 bp | GTACCACCTCTCTACTTTAGGGGTTGTGCTGGGCCGTaGAGGTGGCGCCATCAGTCACATGCTTCTGCCCTT | + |
Preference number: 3 (lower is better) Translates to: VPPLYFRGCAGP*RWRHQSHASAL Trigger: AAGGGCAGAAGCATGTGACTGATGGCGCCACCTCCACGGCCCAGCACAACCCCTAAAGTAGAGAGGTGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR CAA 90 bp | CCAAATGGGAAGCAGCAGCCAGGCTTCCTGGAGAGTCTACACGCCAGGTCGTGGCTCCAACTAAGGAACTaGGTAGTAAAGCCACAGGCG | + |
Preference number: 3 (lower is better) Translates to: PNGKQQPGFLESLHARSWLQLRN*VVKPQA Trigger: CGCCTGTGGCTTTACTACCAAGTTCCTTAGTTGGAG...CCACGACCTGGCGTGTAGACTCTCCAGGAAGCCTGGCTGCTGCTTCCCATTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR GCA 72 bp | CTGTGGTACGAGCGGTCTTTGGAGAACGTGCCATCATaGTGTTGGAAGGGCAAAAAGTGGTCCCTCGGCGGA | + |
Preference number: 3 (lower is better) Translates to: LWYERSLENVPS*CWKGKKWSLGG Trigger: TCCGCCGAGGGACCACTTTTTGCCCTTCCAACAGCATGATGGCACGTTCTCCAAAGACCGCTCGTACCACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR GCA 72 bp | AAAAGACCCACAGCCCTCAACGCTGCCCACTCCACGTaGACACGGGAAGACCATAAGGGAGAAGGGAAAGCA | + |
Preference number: 3 (lower is better) Translates to: KRPTALNAAHST*TREDHKGEGKA Trigger: TGCTTTCCCTTCTCCCTTATGGTCTTCCCGTGTGCACGTGGAGTGGGCAGCGTTGAGGGCTGTGGGTCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 72 bp | GGGAGTGGACAGTGGACATCTCTGAATGTGAAGTTCTaGCTAGGGAGCCTGAACAGCCAGCCACAGGCAGAC | + |
Preference number: 3 (lower is better) Translates to: GSGQWTSLNVKF*LGSLNSQPQAD Trigger: GTCTGCCTGTGGCTGGCTGTTCAGGCTCCCTAGCCAGAACTTCACATTCAGAGATGTCCACTGTCCACTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR CCA 72 bp | GCTCAGAAGTTGAGACTCAGCAGGGCCTCAGAAAGCTaGTTAATATCCCGGCAGTACGGTTCCCGCTGCAGG | + |
Preference number: 3 (lower is better) Translates to: AQKLRLSRASES*LISRQYGSRCR Trigger: CCTGCAGCGGGAACCGTACTGCCGGGATATTAACCAGCTTTCTGAGGCCCTGCTGAGTCTCAACTTCTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 72 bp | TACGAGCGGTCTTTGGAGAACGTGCCATCATGCTGTTaGAAGGGCAAAAAGTGGTCCCTCGGCGGACACTGG | + |
Preference number: 3 (lower is better) Translates to: YERSLENVPSCC*KGKKWSLGGHW Trigger: CCAGTGTCCGCCGAGGGACCACTTTTTGCCCTTCCAACAGCATGATGGCACGTTCTCCAAAGACCGCTCGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 72 bp | GGAGGCCCCATCGGTTCAGGTCGCCAATTCTTCCCCTaGATACACATTGGTGACCTGGCAGGAATTCTGAAC | + |
Preference number: 3 (lower is better) Translates to: GGPIGSGRQFFP*IHIGDLAGILN Trigger: GTTCAGAATTCCTGCCAGGTCACCAATGTGTATCCAGGGGAAGAATTGGCGACCTGAACCGATGGGGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR GCA 72 bp | CAGCCTATCCTACCACTCAGAGGAGCAGCCAGAGGGTaGTTTCTTTCTCAGCTTAGCCTTTTTGTCGCCTCC | + |
Preference number: 3 (lower is better) Translates to: QPILPLRGAARG*FLSQLSLFVAS Trigger: GGAGGCGACAAAAAGGCTAAGCTGAGAAAGAAAGCACCCTCTGGCTGCTCCTCTGAGTGGTAGGATAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR GCA 72 bp | TACTGGCTACCAGTACTCCTTCCCAGAGCTGAGGGCTaGCTTGAAGGATGTTGTAGCCTGAGCAGAGAAGGA | + |
Preference number: 3 (lower is better) Translates to: YWLPVLLPRAEG*LEGCCSLSREG Trigger: TCCTTCTCTGCTCAGGCTACAACATCCTTCAAGGCAGCCCTCAGCTCTGGGAAGGAGTACTGGTAGCCAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
||
3UTR CCA 72 bp | CATACCTGTCCCCAGCACTGTGGTACGAGCGGTCTTTaGAGAACGTGCCATCATGCTGTTGGAAGGGCAAAA | + |
Preference number: 3 (lower is better) Translates to: HTCPQHCGTSGL*RTCHHAVGRAK Trigger: TTTTGCCCTTCCAACAGCATGATGGCACGTTCTCCAAAGACCGCTCGTACCACAGTGCTGGGGACAGGTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 72 bp | CCAAGGGCCTGGGAATCAGGCAACATGGACGATTCCTaGGCTGAGCTTGCAGGGAGAGGACACTATTACTTT | + |
Preference number: 3 (lower is better) Translates to: PRAWESGNMDDS*AELAGRGHYYF Trigger: AAAGTAATAGTGTCCTCTCCCTGCAAGCTCAGCCCAGGAATCGTCCATGTTGCCTGATTCCCAGGCCCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 72 bp | TCAGAGGATGCCAGCAAAAGTGGGAAAAGGGCCCTGTaGGCTAGCCTTCAGCATTTACCAAACAGCCATGAG | + |
Preference number: 3 (lower is better) Translates to: SEDASKSGKRAL*ASLQHLPNSHE Trigger: CTCATGGCTGTTTGGTAAATGCTGAAGGCTAGCCCACAGGGCCCTTTTCCCACTTTTGCTGGCATCCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR CAA 90 bp | TCAGGTCGCCAATTCTTCCCCTGGATACACATTGGTGACCTGGCAGGAATTCTGCGTGAGTTTCGAAGGTaGCTGAAAAGGGATGCAGCC | + |
Preference number: 3 (lower is better) Translates to: SGRQFFPWIHIGDLAGILREFRR*LKRDAA Trigger: GGCTGCATCCCTTTTCAGCAACCTTCGAAACTCACG...CAGAATTCCTGCCAGGTCACCAATGTGTATCCAGGGGAAGAATTGGCGACCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR CAA 90 bp | TTAACATCGAGGGAGTGGACAGTGGACATCTCTGAATGTGAAGTTCTGGCTAGGTTCCGAATGCCACCATaGCTCCTGTCCGCGTCCTTC | + |
Preference number: 3 (lower is better) Translates to: LTSREWTVDISECEVLARFRMPP*LLSASF Trigger: GAAGGACGCGGACAGGAGCAATGGTGGCATTCGGAA...CCTAGCCAGAACTTCACATTCAGAGATGTCCACTGTCCACTCCCTCGATGTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR CAA 90 bp | ACCCAAGGAAACAGACAAAGACACTGGGACCCAGAGAGCCACATAGTTAACTCCCGTGAGTTTCGAAGGTaGCTGAAAAGGGATGCAGCC | + |
Preference number: 3 (lower is better) Translates to: TQGNRQRHWDPESHIVNSREFRR*LKRDAA Trigger: GGCTGCATCCCTTTTCAGCAACCTTCGAAACTCACG...GGAGTTAACTATGTGGCTCTCTGGGTCCCAGTGTCTTTGTCTGTTTCCTTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR TCA 72 bp | TCCCCTGGATACACATTGGTGACCTGGCAGGAATTCTaGACTATGCCCTTGAAGCAAACCACGTCCAAGGAG | + |
Preference number: 3 (lower is better) Translates to: SPGYTLVTWQEF*TMPLKQTTSKE Trigger: CTCCTTGGACGTGGTTTGCTTCAAGGGCATAGTTCAGAATTCCTGCCAGGTCACCAATGTGTATCCAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
||
3UTR GCA 72 bp | AGGGCACTCAGGGAAGGGAAGATAACCCCAGCCTTCTaGATACCCACCATCATGGCAAGAGAAAAGAGAAGA | + |
Preference number: 3 (lower is better) Translates to: RALREGKITPAF*IPTIMAREKRR Trigger: TCTTCTCTTTTCTCTTGCCATGATGGTGGGTATGCAGAAGGCTGGGGTTATCTTCCCTTCCCTGAGTGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR-3UTR CAA 90 bp | GTGTGCCACCTTGCAGACAGTACATTCCCCGGCACAGACAGAGTTCAAACAGATTGGTCCTTCCTCAGGTaGAGTCATTTTAAGGACCTG | + |
Preference number: 3 (lower is better) Translates to: VCHLADSTFPGTDRVQTDWSFLR*SHFKDL Trigger: CAGGTCCTTAAAATGACTCAACCTGAGGAAGGACCA...ATCTGTTTGAACTCTGTCTGTGCCGGGGAATGTACTGTCTGCAAGGTGGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR TCA 72 bp | GAAAAGGGATGCAGCCATTTACAGGGCATGTTCTACTaGAAGCCCAGCGTTAACATCGAGGGAGTGGACAGT | + |
Preference number: 3 (lower is better) Translates to: EKGCSHLQGMFY*KPSVNIEGVDS Trigger: ACTGTCCACTCCCTCGATGTTAACGCTGGGCTTTCAGTAGAACATGCCCTGTAAATGGCTGCATCCCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR-3UTR CAA 90 bp | GGGAGCCTTCTCTGTTCTCATTTCCCTCAACGGTTATCTTTATGCCTGATGTGTTGGTCCTTCCTCAGGTaGAGTCATTTTAAGGACCTG | + |
Preference number: 3 (lower is better) Translates to: GSLLCSHFPQRLSLCLMCWSFLR*SHFKDL Trigger: CAGGTCCTTAAAATGACTCAACCTGAGGAAGGACCA...ACACATCAGGCATAAAGATAACCGTTGAGGGAAATGAGAACAGAGAAGGCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR TCA 72 bp | GCAGCCATCCACCCTAACTTGCCTATTTTGATAACGTaGGTTTCGAAGGTTGCTGAAAAGGGATGCAGCCAT | + |
Preference number: 3 (lower is better) Translates to: AAIHPNLPILIT*VSKVAEKGCSH Trigger: ATGGCTGCATCCCTTTTCAGCAACCTTCGAAACTCACGTTATCAAAATAGGCAAGTTAGGGTGGATGGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR TCA 72 bp | ACTCTGAGAAGTGGGTCAGGTGATGATCCCTGCACTTaGTTGAGATCAGAATCCATCAGGGTCTTAGACTCT | + |
Preference number: 3 (lower is better) Translates to: TLRSGSGDDPCT*LRSESIRVLDS Trigger: AGAGTCTAAGACCCTGATGGATTCTGATCTCAATCAAGTGCAGGGATCATCACCTGACCCACTTCTCAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 72 bp | AGGCAAAGAGTATTCCCACACTCAAATTCTCTTCTCTaGTGCTTCCTCTGGCCAAAGCACCATCTTAGAGTG | + |
Preference number: 3 (lower is better) Translates to: RQRVFPHSNSLL*CFLWPKHHLRV Trigger: CACTCTAAGATGGTGCTTTGGCCAGAGGAAGCACCAGAGAAGAGAATTTGAGTGTGGGAATACTCTTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR TCA 72 bp | GAGCTAGAAAGGCATCTAATTCAGGGACTTGCTACATaGACCCAGTGGCACCTGCCTTACCTTTTTATACCT | + |
Preference number: 3 (lower is better) Translates to: ELERHLIQGLAT*TQWHLPYLFIP Trigger: AGGTATAAAAAGGTAAGGCAGGTGCCACTGGGTTCATGTAGCAAGTCCCTGAATTAGATGCCTTTCTAGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR CCA 72 bp | GAGTTAGAATGTAAACAGCTTGTCATGACAGGTCAATaGAGTCCGTCTGTAACCAATCAGGTATCTCGATCC | + |
Preference number: 3 (lower is better) Translates to: ELECKQLVMTGQ*SPSVTNQVSRS Trigger: GGATCGAGATACCTGATTGGTTACAGACGGACTCCATTGACCTGTCATGACAAGCTGTTTACATTCTAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR TCA 72 bp | CTTGCCTATTTTGATAACGTGAGTTTCGAAGGTTGCTaGAAAGGGATGCAGCCATTTACAGGGCATGTTCTA | + |
Preference number: 3 (lower is better) Translates to: LAYFDNVSFEGC*KGMQPFTGHVL Trigger: TAGAACATGCCCTGTAAATGGCTGCATCCCTTTTCAGCAACCTTCGAAACTCACGTTATCAAAATAGGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR GCA 72 bp | TTCCGCTTCCCATACACAGAAGGTAGCAGTGTGTCTTaGCGAAAGAAACCTGTCTTCCATAAAGGAAATATT | + |
Preference number: 3 (lower is better) Translates to: FRFPYTEGSSVS*RKKPVFHKGNI Trigger: AATATTTCCTTTATGGAAGACAGGTTTCTTTCGGCAAGACACACTGCTACCTTCTGTGTATGGGAAGCGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR TCA 72 bp | CGCTGTCTCTTTGGCTTATATTCCCCTAGAATTATCTaGAGAACTATTACCCTACATGGCTCTTCTCCTAAG | + |
Preference number: 3 (lower is better) Translates to: RCLFGLYSPRII*RTITLHGSSPK Trigger: CTTAGGAGAAGAGCCATGTAGGGTAATAGTTCTTCAGATAATTCTAGGGGAATATAAGCCAAAGAGACAGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 72 bp | CAGACAGAGTTCAAACAGATACAGAGCAATGACTTGTaGGAGTTAGAATGTAAACAGCTTGTCATGACAGGT | + |
Preference number: 3 (lower is better) Translates to: QTEFKQIQSNDL*ELECKQLVMTG Trigger: ACCTGTCATGACAAGCTGTTTACATTCTAACTCCCACAAGTCATTGCTCTGTATCTGTTTGAACTCTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR GCA 72 bp | TCTTCAACTTCTTCTGTGGCTTCTGTGTTACATTGTTaGCCTGGTTCTCATATATGCTGTGTAGACAATGTT | + |
Preference number: 3 (lower is better) Translates to: SSTSSVASVLHC*PGSHICCVDNV Trigger: AACATTGTCTACACAGCATATATGAGAACCAGGGCAACAATGTAACACAGAAGCCACAGAAGAAGTTGAAGA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CCA 72 bp | AACTTCTTCTGTGGCTTCTGTGTTACATTGTTGCCCTaGTTCTCATATATGCTGTGTAGACAATGTTCTACA | + |
Preference number: 3 (lower is better) Translates to: NFFCGFCVTLLP*FSYMLCRQCST Trigger: TGTAGAACATTGTCTACACAGCATATATGAGAACCAGGGCAACAATGTAACACAGAAGCCACAGAAGAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | CCTGTCCGCGTCCTTCCCCTGCTGCTGATTAGCCTGCTCTGTGGAGCCTTTAGAAGGCACTCTCGGAGGTaGGGCGCTCCCATTGTGGAG | + |
Preference number: 4 (lower is better) Translates to: PVRVLPLLLISLLCGAFRRHSRR*GAPIVE Trigger: CTCCACAATGGGAGCGCCTCACCTCCGAGAGTGCCT...TCTAAAGGCTCCACAGAGCAGGCTAATCAGCAGCAGGGGAAGGACGCGGACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | CCGCCTGGGCCTAGGAGGCCCCATCGGTTCAGGTCGCCAATTCTTCCCCTGGATGCATCCTCCCTAGTCTaGAGCAGGGCAGAGAAGTCT | + |
Preference number: 4 (lower is better) Translates to: PPGPRRPHRFRSPILPLDASSLV*SRAEKS Trigger: AGACTTCTCTGCCCTGCTGCAGACTAGGGAGGATGC...ATCCAGGGGAAGAATTGGCGACCTGAACCGATGGGGCCTCCTAGGCCCAGGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | GCTGAGACTGGAAGCCTGCCCACCTCTGCCTTCTGGTTCTCAACTAGCCCACTGAACACTTCGAGCAGCTaGCGCCGCAGCCGCTCTGTC | + |
Preference number: 4 (lower is better) Translates to: AETGSLPTSAFWFSTSPLNTSSS*RRSRSV Trigger: GACAGAGCGGCTGCGGCGCCAGCTGCTCGAAGTGTT...CAGTGGGCTAGTTGAGAACCAGAAGGCAGAGGTGGGCAGGCTTCCAGTCTCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022831.5 |
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CDS-3UTR GCA 90 bp | GCTGAGACTGGAAGCCTGCCCACCTCTGCCTTCTGGTTCTCAACTAGCCCACTGCCTGGAAACGCTGCGTaGCAGTCACCAAGTTGCCCC | + |
Preference number: 4 (lower is better) Translates to: AETGSLPTSAFWFSTSPLPGNAA*QSPSCP Trigger: GGGGCAACTTGGTGACTGGCACGCAGCGTTTCCAGG...CAGTGGGCTAGTTGAGAACCAGAAGGCAGAGGTGGGCAGGCTTCCAGTCTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | GCTGAGACTGGAAGCCTGCCCACCTCTGCCTTCTGGTTCTCAACTAGCCCACTGGGACAAGACTGTAGCTaGAGGTCCCAGCTCAGCCGT | + |
Preference number: 4 (lower is better) Translates to: AETGSLPTSAFWFSTSPLGQDCS*RSQLSR Trigger: ACGGCTGAGCTGGGACCTTCAGCTACAGTCTTGTCC...CAGTGGGCTAGTTGAGAACCAGAAGGCAGAGGTGGGCAGGCTTCCAGTCTCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | GATCTGTCTCCAGTGAGCTCTGGTGTCACCCTGACACCTGTTCAGAGGATGCCACAGCTCCTTCCGCCCTaGACCCATGTCCCTGACAGC | + |
Preference number: 4 (lower is better) Translates to: DLSPVSSGVTLTPVQRMPQLLPP*THVPDS Trigger: GCTGTCAGGGACATGGGTTCAGGGCGGAAGGAGCTG...TGGCATCCTCTGAACAGGTGTCAGGGTGACACCAGAGCTCACTGGAGACAGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | CCGCCTGGGCCTAGGAGGCCCCATCGGTTCAGGTCGCCAATTCTTCCCCTGGATCCTTGGAATCTTTACTaGAGCGCCACTGAGGCACAA | + |
Preference number: 4 (lower is better) Translates to: PPGPRRPHRFRSPILPLDPWNLY*SATEAQ Trigger: TTGTGCCTCAGTGGCGCTTCAGTAAAGATTCCAAGG...ATCCAGGGGAAGAATTGGCGACCTGAACCGATGGGGCCTCCTAGGCCCAGGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | GATCTGTCTCCAGTGAGCTCTGGTGTCACCCTGACACCTGTTCAGAGGATGCCACGAGCTCCAGCCTGCTaGTTGTCTCCCCTGTCTCCC | + |
Preference number: 4 (lower is better) Translates to: DLSPVSSGVTLTPVQRMPRAPAC*LSPLSP Trigger: GGGAGACAGGGGAGACAAGCAGCAGGCTGGAGCTCG...TGGCATCCTCTGAACAGGTGTCAGGGTGACACCAGAGCTCACTGGAGACAGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | AGTAAGGAGTGTGCCACCTTGCAGACAGTACATTCCCCGGCACAGACAGAGTTCCCATTGTGGAGCCGCTaGAGGAGAGAGGCTCCCCGG | + |
Preference number: 4 (lower is better) Translates to: SKECATLQTVHSPAQTEFPLWSR*RREAPR Trigger: CCGGGGAGCCTCTCTCCTCCAGCGGCTCCACAATGG...GAACTCTGTCTGTGCCGGGGAATGTACTGTCTGCAAGGTGGCACACTCCTTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | GGAGCAGCCAGAGGGTGCTTTCTTTCTCAGCTTAGCCTTTTTGTCGCCTCCAGCGAGGCGCTCCCATTGTaGAGCCGCTGGAGGAGAGAG | + |
Preference number: 4 (lower is better) Translates to: GAARGCFLSQLSLFVASSEALPL*SRWRRE Trigger: CTCTCTCCTCCAGCGGCTCCACAATGGGAGCGCCTC...GCTGGAGGCGACAAAAAGGCTAAGCTGAGAAAGAAAGCACCCTCTGGCTGCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | CCTTCATACCTGTCCCCAGCACTGTGGTACGAGCGGTCTTTGGAGAACGTGCCACTGACTCCCTGGAACTaGGGACTCAACAGGCCTGAG | + |
Preference number: 4 (lower is better) Translates to: PSYLSPALWYERSLENVPLTPWN*GLNRPE Trigger: CTCAGGCCTGTTGAGTCCTCAGTTCCAGGGAGTCAG...TGGCACGTTCTCCAAAGACCGCTCGTACCACAGTGCTGGGGACAGGTATGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | CCGCCTGGGCCTAGGAGGCCCCATCGGTTCAGGTCGCCAATTCTTCCCCTGGATCAGCCAGCTTCACCATaGACCTGTCATCATAAGAAG | + |
Preference number: 4 (lower is better) Translates to: PPGPRRPHRFRSPILPLDQPASP*TCHHKK Trigger: CTTCTTATGATGACAGGTTCATGGTGAAGCTGGCTG...ATCCAGGGGAAGAATTGGCGACCTGAACCGATGGGGCCTCCTAGGCCCAGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | CGAGGGAGTGGACAGTGGACATCTCTGAATGTGAAGTTCTGGCTAGGGAGCCTGCCAGGTGGGCAGATGTaGTCCAGGCCAGGCAGTCAA | + |
Preference number: 4 (lower is better) Translates to: RGSGQWTSLNVKFWLGSLPGGQM*SRPGSQ Trigger: TTGACTGCCTGGCCTGGAGCACATCTGCCCACCTGG...CAGGCTCCCTAGCCAGAACTTCACATTCAGAGATGTCCACTGTCCACTCCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | GCTGAGACTGGAAGCCTGCCCACCTCTGCCTTCTGGTTCTCAACTAGCCCACTGGCTTCCTGGAAACGCTaGGTGCCAGTCACCAAGTTG | + |
Preference number: 4 (lower is better) Translates to: AETGSLPTSAFWFSTSPLASWKR*VPVTKL Trigger: CAACTTGGTGACTGGCACGCAGCGTTTCCAGGAAGC...CAGTGGGCTAGTTGAGAACCAGAAGGCAGAGGTGGGCAGGCTTCCAGTCTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | CCAAATGGGAAGCAGCAGCCAGGCTTCCTGGAGAGTCTACACGCCAGGTCGTGGCTGAACCCATGTCCCTaGCAGCATCCTGTTTCCTTT | + |
Preference number: 4 (lower is better) Translates to: PNGKQQPGFLESLHARSWLNPCP*QHPVSF Trigger: AAAGGAAACAGGATGCTGTCAGGGACATGGGTTCAG...CCACGACCTGGCGTGTAGACTCTCCAGGAAGCCTGGCTGCTGCTTCCCATTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | AGTAAGGAGTGTGCCACCTTGCAGACAGTACATTCCCCGGCACAGACAGAGTTCATTGGAGCTGCCCTCTaGCAGGGCACATGCGCACCT | + |
Preference number: 4 (lower is better) Translates to: SKECATLQTVHSPAQTEFIGAAL*QGTCAP Trigger: AGGTGCGCATGTGCCCTGTCAGAGGGCAGCTCCAAT...GAACTCTGTCTGTGCCGGGGAATGTACTGTCTGCAAGGTGGCACACTCCTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | GCTGAGACTGGAAGCCTGCCCACCTCTGCCTTCTGGTTCTCAACTAGCCCACTGCCATCAATGACAATGTaGCGGAGATCTGGCTGGCCA | + |
Preference number: 4 (lower is better) Translates to: AETGSLPTSAFWFSTSPLPSMTM*RRSGWP Trigger: TGGCCAGCCAGATCTCCGTCACATTGTCATTGATGG...CAGTGGGCTAGTTGAGAACCAGAAGGCAGAGGTGGGCAGGCTTCCAGTCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | CGAGGGAGTGGACAGTGGACATCTCTGAATGTGAAGTTCTGGCTAGGGAGCCTGTCCTCTTGCCATCCATaGCTCGTGAGGGTGTCAGGG | + |
Preference number: 4 (lower is better) Translates to: RGSGQWTSLNVKFWLGSLSSCHP*LVRVSG Trigger: CCCTGACACCCTCACGAGTCATGGATGGCAAGAGGA...CAGGCTCCCTAGCCAGAACTTCACATTCAGAGATGTCCACTGTCCACTCCCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | GGTCTCTCATCTTCTCAGGAACACTCAGCCTTCCAGGGCACTCAGGGAAGGGAAGGGCTCCCAGAAAGATaGAGTGCAGTCTGGGTGGGT | + |
Preference number: 4 (lower is better) Translates to: GLSSSQEHSAFQGTQGREGLPER*SAVWVG Trigger: ACCCACCCAGACTGCACTGCATCTTTCTGGGAGCCC...TTCCCTTCCCTGAGTGCCCTGGAAGGCTGAGTGTTCCTGAGAAGATGAGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | GATCTGTCTCCAGTGAGCTCTGGTGTCACCCTGACACCTGTTCAGAGGATGCCATCACGAGATGGACCCTaGCCTCTAGATGCCTCCTGC | + |
Preference number: 4 (lower is better) Translates to: DLSPVSSGVTLTPVQRMPSRDGP*PLDASC Trigger: GCAGGAGGCATCTAGAGGGCAGGGTCCATCTCGTGA...TGGCATCCTCTGAACAGGTGTCAGGGTGACACCAGAGCTCACTGGAGACAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | GGAGCAGCCAGAGGGTGCTTTCTTTCTCAGCTTAGCCTTTTTGTCGCCTCCAGCTGCAGACGTTCTCCTTaGGGCCCTCAAGCTGCAACC | + |
Preference number: 4 (lower is better) Translates to: GAARGCFLSQLSLFVASSCRRSP*GPQAAT Trigger: GGTTGCAGCTTGAGGGCCCCAAGGAGAACGTCTGCA...GCTGGAGGCGACAAAAAGGCTAAGCTGAGAAAGAAAGCACCCTCTGGCTGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR CAA 72 bp | GTACGAGCGGTCTTTGGAGAACGTGCCATCATGCTGTaGGAAGGGCAAAAAGTGGTCCCTCGGCGGACACTG | + |
Preference number: 4 (lower is better) Translates to: VRAVFGERAIML*EGQKVVPRRTL Trigger: CAGTGTCCGCCGAGGGACCACTTTTTGCCCTTCCAACAGCATGATGGCACGTTCTCCAAAGACCGCTCGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | CCAGGCAAAGAGTATTCCCACACTCAAATTCTCTTCTCTGGTGCTTCCTCTGGCCAGCTCCTTCCGCCCTaGACCCATGTCCCTGACAGC | + |
Preference number: 4 (lower is better) Translates to: PGKEYSHTQILFSGASSGQLLPP*THVPDS Trigger: GCTGTCAGGGACATGGGTTCAGGGCGGAAGGAGCTG...GCCAGAGGAAGCACCAGAGAAGAGAATTTGAGTGTGGGAATACTCTTTGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | GCCAGAGGGTGCTTTCTTTCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCTCCACCTTGTGGTCCTaGCCCCAAAACACTTCGAGC | + |
Preference number: 4 (lower is better) Translates to: ARGCFLSQLSLFVASSLPSTLWS*PQNTSS Trigger: GCTCGAAGTGTTTTGGGGTCAGGACCACAAGGTGGA...GGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGAAAGAAAGCACCCTCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022831.5 |
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CDS-3UTR GCA 90 bp | CGAGGGAGTGGACAGTGGACATCTCTGAATGTGAAGTTCTGGCTAGGGAGCCTGCAGTACGGTTCCCGCTaGAGGATGAAGTCCACCTTG | + |
Preference number: 4 (lower is better) Translates to: RGSGQWTSLNVKFWLGSLQYGSR*RMKSTL Trigger: CAAGGTGGACTTCATCCTGCAGCGGGAACCGTACTG...CAGGCTCCCTAGCCAGAACTTCACATTCAGAGATGTCCACTGTCCACTCCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022831.5 |
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CDS-3UTR CCA 90 bp | GGTCTCTCATCTTCTCAGGAACACTCAGCCTTCCAGGGCACTCAGGGAAGGGAATTGTCCTCTTACTGCTaGCGACTTTCCCGACCCTGC | + |
Preference number: 4 (lower is better) Translates to: GLSSSQEHSAFQGTQGRELSSYC*RLSRPC Trigger: GCAGGGTCGGGAAAGTCGCCAGCAGTAAGAGGACAA...TTCCCTTCCCTGAGTGCCCTGGAAGGCTGAGTGTTCCTGAGAAGATGAGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | CGAGGGAGTGGACAGTGGACATCTCTGAATGTGAAGTTCTGGCTAGGGAGCCTGAATGTGACGGAGATCTaGCTGGCCAGGCACATTGGC | + |
Preference number: 4 (lower is better) Translates to: RGSGQWTSLNVKFWLGSLNVTEI*LARHIG Trigger: GCCAATGTGCCTGGCCAGCCAGATCTCCGTCACATT...CAGGCTCCCTAGCCAGAACTTCACATTCAGAGATGTCCACTGTCCACTCCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | AGTAAGGAGTGTGCCACCTTGCAGACAGTACATTCCCCGGCACAGACAGAGTTCGGAGTCCGTGCACCATaGCCACGTTGCTGCCATCAA | + |
Preference number: 4 (lower is better) Translates to: SKECATLQTVHSPAQTEFGVRAP*PRCCHQ Trigger: TTGATGGCAGCAACGTGGCCATGGTGCACGGACTCC...GAACTCTGTCTGTGCCGGGGAATGTACTGTCTGCAAGGTGGCACACTCCTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | CGAGGGAGTGGACAGTGGACATCTCTGAATGTGAAGTTCTGGCTAGGGAGCCTGACGGTTATGTCACGGTaGCCACGGTCCCAGAAGTAC | + |
Preference number: 4 (lower is better) Translates to: RGSGQWTSLNVKFWLGSLTVMSR*PRSQKY Trigger: GTACTTCTGGGACCGTGGCCACCGTGACATAACCGT...CAGGCTCCCTAGCCAGAACTTCACATTCAGAGATGTCCACTGTCCACTCCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | AGTAAGGAGTGTGCCACCTTGCAGACAGTACATTCCCCGGCACAGACAGAGTTCGGAACTCATCCAGGGTaGGGCCATTTCGTCCCAGTG | + |
Preference number: 4 (lower is better) Translates to: SKECATLQTVHSPAQTEFGTHPG*GHFVPV Trigger: CACTGGGACGAAATGGCCCCACCCTGGATGAGTTCC...GAACTCTGTCTGTGCCGGGGAATGTACTGTCTGCAAGGTGGCACACTCCTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022831.5 |
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CDS-3UTR TCA 90 bp | TTAACATCGAGGGAGTGGACAGTGGACATCTCTGAATGTGAAGTTCTGGCTAGGAGGCACTCTCGGAGGTaGGGCGCTCCCATTGTGGAG | + |
Preference number: 4 (lower is better) Translates to: LTSREWTVDISECEVLARRHSRR*GAPIVE Trigger: CTCCACAATGGGAGCGCCTCACCTCCGAGAGTGCCT...CCTAGCCAGAACTTCACATTCAGAGATGTCCACTGTCCACTCCCTCGATGTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | CCTTCATACCTGTCCCCAGCACTGTGGTACGAGCGGTCTTTGGAGAACGTGCCATTACTGAAGCGCCACTaGGGCACAAAGACGGTTATG | + |
Preference number: 4 (lower is better) Translates to: PSYLSPALWYERSLENVPLLKRH*GTKTVM Trigger: CATAACCGTCTTTGTGCCTCAGTGGCGCTTCAGTAA...TGGCACGTTCTCCAAAGACCGCTCGTACCACAGTGCTGGGGACAGGTATGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | GTGTGCCACCTTGCAGACAGTACATTCCCCGGCACAGACAGAGTTCAAACAGATCTTTCCCTTCAAGGGTaGCACCTCCTCTGCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: VCHLADSTFPGTDRVQTDLSLQG*HLLCSS Trigger: GGAGGAGCAGAGGAGGTGGCACCCTTGAAGGGAAAG...ATCTGTTTGAACTCTGTCTGTGCCGGGGAATGTACTGTCTGCAAGGTGGCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | TCTCATCTTCTCAGGAACACTCAGCCTTCCAGGGCACTCAGGGAAGGGAAGATACTTTCCCTTCAAGGGTaGCACCTCCTCTGCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: SHLLRNTQPSRALREGKILSLQG*HLLCSS Trigger: GGAGGAGCAGAGGAGGTGGCACCCTTGAAGGGAAAG...TATCTTCCCTTCCCTGAGTGCCCTGGAAGGCTGAGTGTTCCTGAGAAGATGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | TTAACATCGAGGGAGTGGACAGTGGACATCTCTGAATGTGAAGTTCTGGCTAGGCGAGCTCCAGCCTGCTaGTTGTCTCCCCTGTCTCCC | + |
Preference number: 4 (lower is better) Translates to: LTSREWTVDISECEVLARRAPAC*LSPLSP Trigger: GGGAGACAGGGGAGACAAGCAGCAGGCTGGAGCTCG...CCTAGCCAGAACTTCACATTCAGAGATGTCCACTGTCCACTCCCTCGATGTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | TCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAATGCCAGTCACCAAGTTaGCCCCACGAGTGCCTCGCT | + |
Preference number: 4 (lower is better) Translates to: SQLSLFVASSLPYPPTKECQSPS*PHECLA Trigger: AGCGAGGCACTCGTGGGGGCAACTTGGTGACTGGCA...TTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | GCCAGAGGGTGCTTTCTTTCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCAGATGCAGTGCAGTCTaGGTGGGTAGTGGATCTCAC | + |
Preference number: 4 (lower is better) Translates to: ARGCFLSQLSLFVASSLPRCSAV*VGSGSH Trigger: GTGAGATCCACTACCCACCCAGACTGCACTGCATCT...GGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGAAAGAAAGCACCCTCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | TGTTGGAAGGGCAAAAAGTGGTCCCTCGGCGGACACTGGCTACTGGCTACCAGTGCCAGATCCCGGAACTaGTCATTGGAGACAATGATC | + |
Preference number: 4 (lower is better) Translates to: CWKGKKWSLGGHWLLATSARSRN*SLETMI Trigger: GATCATTGTCTCCAATGACCAGTTCCGGGATCTGGC...ACTGGTAGCCAGTAGCCAGTGTCCGCCGAGGGACCACTTTTTGCCCTTCCAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CAA 72 bp | TCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAACTaGGTAGTAAAGCCACAGGCGCAGTCTCCTGGAACA | + |
Preference number: 4 (lower is better) Translates to: SPPAYPILQLRN*VVKPQAQSPGT Trigger: TGTTCCAGGAGACTGCGCCTGTGGCTTTACTACCAAGTTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR CAA 72 bp | TCATACCTGTCCCCAGCACTGTGGTACGAGCGGTCTTaGGAGAACGTGCCATCATGCTGTTGGAAGGGCAAA | + |
Preference number: 4 (lower is better) Translates to: SYLSPALWYERS*ENVPSCCWKGK Trigger: TTTGCCCTTCCAACAGCATGATGGCACGTTCTCCAAAGACCGCTCGTACCACAGTGCTGGGGACAGGTATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | ACAGCTTACTACCAGCCAAGCCTGACTAAGGAGTATGATGAAGACAGCCCAGGAGCCATCCATGACTCGTaGGGGTGTCAGGGAAAGCAG | + |
Preference number: 4 (lower is better) Translates to: TAYYQPSLTKEYDEDSPGAIHDS*GCQGKQ Trigger: CTGCTTTCCCTGACACCCTCACGAGTCATGGATGGC...TCCTGGGCTGTCTTCATCATACTCCTTAGTCAGGCTTGGCTGGTAGTAAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | TCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAATCCTCTTGCCATCCATaGCTCGTGAGGGTGTCAGGG | + |
Preference number: 4 (lower is better) Translates to: SQLSLFVASSLPYPPTKESSCHP*LVRVSG Trigger: CCCTGACACCCTCACGAGTCATGGATGGCAAGAGGA...TTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | GGTCTCTCATCTTCTCAGGAACACTCAGCCTTCCAGGGCACTCAGGGAAGGGAATCTGTAGTTCTGGGCTaGAGAGCCCCTTCAGGTATT | + |
Preference number: 4 (lower is better) Translates to: GLSSSQEHSAFQGTQGRESVVLG*RAPSGI Trigger: AATACCTGAAGGGGCTCTGCAGCCCAGAACTACAGA...TTCCCTTCCCTGAGTGCCCTGGAAGGCTGAGTGTTCCTGAGAAGATGAGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | TCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAAGGGCTCCCAGAAAGATaGAGTGCAGTCTGGGTGGGT | + |
Preference number: 4 (lower is better) Translates to: SQLSLFVASSLPYPPTKEGLPER*SAVWVG Trigger: ACCCACCCAGACTGCACTGCATCTTTCTGGGAGCCC...TTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | TCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAACGACTTTCCCGACCCTaGCACTCTGGTGCCTACGAA | + |
Preference number: 4 (lower is better) Translates to: SQLSLFVASSLPYPPTKERLSRP*HSGAYE Trigger: TTCGTAGGCACCAGAGTGGCAGGGTCGGGAAAGTCG...TTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | TTAACATCGAGGGAGTGGACAGTGGACATCTCTGAATGTGAAGTTCTGGCTAGGCCTGGAAACGCTGCGTaGCAGTCACCAAGTTGCCCC | + |
Preference number: 4 (lower is better) Translates to: LTSREWTVDISECEVLARPGNAA*QSPSCP Trigger: GGGGCAACTTGGTGACTGGCACGCAGCGTTTCCAGG...CCTAGCCAGAACTTCACATTCAGAGATGTCCACTGTCCACTCCCTCGATGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | CCAGGCAAAGAGTATTCCCACACTCAAATTCTCTTCTCTGGTGCTTCCTCTGGCTGCAGACGTTCTCCTTaGGGCCCTCAAGCTGCAACC | + |
Preference number: 4 (lower is better) Translates to: PGKEYSHTQILFSGASSGCRRSP*GPQAAT Trigger: GGTTGCAGCTTGAGGGCCCCAAGGAGAACGTCTGCA...GCCAGAGGAAGCACCAGAGAAGAGAATTTGAGTGTGGGAATACTCTTTGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | TCAGGTCGCCAATTCTTCCCCTGGATACACATTGGTGACCTGGCAGGAATTCTGAATGTGACGGAGATCTaGCTGGCCAGGCACATTGGC | + |
Preference number: 4 (lower is better) Translates to: SGRQFFPWIHIGDLAGILNVTEI*LARHIG Trigger: GCCAATGTGCCTGGCCAGCCAGATCTCCGTCACATT...CAGAATTCCTGCCAGGTCACCAATGTGTATCCAGGGGAAGAATTGGCGACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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3UTR CAA 72 bp | CAGCCAGAGGGTGCTTTCTTTCTCAGCTTAGCCTTTTaGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGG | + |
Preference number: 4 (lower is better) Translates to: QPEGAFFLSLAF*SPPAYPILQLR Trigger: CCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGAAAGAAAGCACCCTCTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR CAA 72 bp | AGGGCAGCAGCTATGCAGGGCAGAAAGGCTCAGAAGTaGAGACTCAGCAGGGCCTCAGAAAGCTGGTTAATA | + |
Preference number: 4 (lower is better) Translates to: RAAAMQGRKAQK*RLSRASESWLI Trigger: TATTAACCAGCTTTCTGAGGCCCTGCTGAGTCTCAACTTCTGAGCCTTTCTGCCCTGCATAGCTGCTGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | TCAGGTCGCCAATTCTTCCCCTGGATACACATTGGTGACCTGGCAGGAATTCTGTGCCTACGAATTCCCTaGCTTCATTCAAGGGAGCCC | + |
Preference number: 4 (lower is better) Translates to: SGRQFFPWIHIGDLAGILCLRIP*LHSREP Trigger: GGGCTCCCTTGAATGAAGGCAGGGAATTCGTAGGCA...CAGAATTCCTGCCAGGTCACCAATGTGTATCCAGGGGAAGAATTGGCGACCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | CAAACTACCCCAGGCAAAGAGTATTCCCACACTCAAATTCTCTTCTCTGGTGCTTGCCAGTCACCAAGTTaGCCCCACGAGTGCCTCGCT | + |
Preference number: 4 (lower is better) Translates to: QTTPGKEYSHTQILFSGACQSPS*PHECLA Trigger: AGCGAGGCACTCGTGGGGGCAACTTGGTGACTGGCA...AGCACCAGAGAAGAGAATTTGAGTGTGGGAATACTCTTTGCCTGGGGTAGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | CGAGGGAGTGGACAGTGGACATCTCTGAATGTGAAGTTCTGGCTAGGGAGCCTGGTCTTAGAAGAACCCTaGTTCCTGACTGGCTTCTTC | + |
Preference number: 4 (lower is better) Translates to: RGSGQWTSLNVKFWLGSLVLEEP*FLTGFF Trigger: GAAGAAGCCAGTCAGGAAGCAGGGTTCTTCTAAGAC...CAGGCTCCCTAGCCAGAACTTCACATTCAGAGATGTCCACTGTCCACTCCCTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022831.5 |
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CDS-3UTR CCA 90 bp | GCCAGAGGGTGCTTTCTTTCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCGATATGAGGATTCTCTaGGCAGTCTTTGGAGAGGAC | + |
Preference number: 4 (lower is better) Translates to: ARGCFLSQLSLFVASSLPDMRIL*AVFGED Trigger: GTCCTCTCCAAAGACTGCCCAGAGAATCCTCATATC...GGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGAAAGAAAGCACCCTCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | TCTAAGAAGTTGACTAGCCCTAAATTACTCCTGGGGAAAGTGAAAGTCACAGAGCCATTGTGGAGCCGCTaGAGGAGAGAGGCTCCCCGG | + |
Preference number: 4 (lower is better) Translates to: SKKLTSPKLLLGKVKVTEPLWSR*RREAPR Trigger: CCGGGGAGCCTCTCTCCTCCAGCGGCTCCACAATGG...CTCTGTGACTTTCACTTTCCCCAGGAGTAATTTAGGGCTAGTCAACTTCTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | AGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAACTTGACGGTTATGTCACGGTaGCCACGGTCCCAGAAGTAC | + |
Preference number: 4 (lower is better) Translates to: SLAFLSPPAYPILQLRNLTVMSR*PRSQKY Trigger: GTACTTCTGGGACCGTGGCCACCGTGACATAACCGT...CAAGTTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAAGGCTAAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | TTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAACTTGGTAGTAAAGGGACAAGACTGTAGCTaGAGGTCCCAGCTCAGCCGT | + |
Preference number: 4 (lower is better) Translates to: FLSPPAYPILQLRNLVVKGQDCS*RSQLSR Trigger: ACGGCTGAGCTGGGACCTTCAGCTACAGTCTTGTCC...CTTTACTACCAAGTTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | TTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAACTTGGTAGTAAAGCTGACTCCCTGGAACTaGGGACTCAACAGGCCTGAG | + |
Preference number: 4 (lower is better) Translates to: FLSPPAYPILQLRNLVVKLTPWN*GLNRPE Trigger: CTCAGGCCTGTTGAGTCCTCAGTTCCAGGGAGTCAG...CTTTACTACCAAGTTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | GGGAGCCTTCTCTGTTCTCATTTCCCTCAACGGTTATCTTTATGCCTGATGTGTCATTCAAGGGAGCCCTaGCTCCCTGGAACTGAGGAC | + |
Preference number: 4 (lower is better) Translates to: GSLLCSHFPQRLSLCLMCHSREP*LPGTED Trigger: GTCCTCAGTTCCAGGGAGTCAGGGCTCCCTTGAATG...ACACATCAGGCATAAAGATAACCGTTGAGGGAAATGAGAACAGAGAAGGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | TTAACATCGAGGGAGTGGACAGTGGACATCTCTGAATGTGAAGTTCTGGCTAGGGTTCACCCTGCACACTaGACCCTCCTCTTTGCTGAG | + |
Preference number: 4 (lower is better) Translates to: LTSREWTVDISECEVLARVHPAH*TLLFAE Trigger: CTCAGCAAAGAGGAGGGTTCAGTGTGCAGGGTGAAC...CCTAGCCAGAACTTCACATTCAGAGATGTCCACTGTCCACTCCCTCGATGTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | AGTAAGATGTCAGTGTCCCTCTATAAGCTTGGTCTCTCATCTTCTCAGGAACACATTGGAGCTGCCCTCTaGCAGGGCACATGCGCACCT | + |
Preference number: 4 (lower is better) Translates to: SKMSVSLYKLGLSSSQEHIGAAL*QGTCAP Trigger: AGGTGCGCATGTGCCCTGTCAGAGGGCAGCTCCAAT...GTGTTCCTGAGAAGATGAGAGACCAAGCTTATAGAGGGACACTGACATCTTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | AGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAACTTGCCATCAATGACAATGTaGCGGAGATCTGGCTGGCCA | + |
Preference number: 4 (lower is better) Translates to: SLAFLSPPAYPILQLRNLPSMTM*RRSGWP Trigger: TGGCCAGCCAGATCTCCGTCACATTGTCATTGATGG...CAAGTTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAAGGCTAAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | TTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAACTTGGTAGTAAAGGCCATCCATGACTCGTaGGGGTGTCAGGGAAAGCAG | + |
Preference number: 4 (lower is better) Translates to: FLSPPAYPILQLRNLVVKAIHDS*GCQGKQ Trigger: CTGCTTTCCCTGACACCCTCACGAGTCATGGATGGC...CTTTACTACCAAGTTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | GTGTGCCACCTTGCAGACAGTACATTCCCCGGCACAGACAGAGTTCAAACAGATAAGAACCCTGCTTCCTaGCTGGCTTCTTCAGGAACT | + |
Preference number: 4 (lower is better) Translates to: VCHLADSTFPGTDRVQTDKNPAS*LASSGT Trigger: AGTTCCTGAAGAAGCCAGTCAGGAAGCAGGGTTCTT...ATCTGTTTGAACTCTGTCTGTGCCGGGGAATGTACTGTCTGCAAGGTGGCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022831.5 |
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CDS-3UTR TCA 90 bp | GGGAGCCTTCTCTGTTCTCATTTCCCTCAACGGTTATCTTTATGCCTGATGTGTGTTCCCGCTGCAGGATaGAGTCCACCTTGTGGTCCT | + |
Preference number: 4 (lower is better) Translates to: GSLLCSHFPQRLSLCLMCVPAAG*SPPCGP Trigger: AGGACCACAAGGTGGACTTCATCCTGCAGCGGGAAC...ACACATCAGGCATAAAGATAACCGTTGAGGGAAATGAGAACAGAGAAGGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022831.5 |
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CDS-3UTR GCA 90 bp | GTGTGCCACCTTGCAGACAGTACATTCCCCGGCACAGACAGAGTTCAAACAGATTCTGTAGTTCTGGGCTaGAGAGCCCCTTCAGGTATT | + |
Preference number: 4 (lower is better) Translates to: VCHLADSTFPGTDRVQTDSVVLG*RAPSGI Trigger: AATACCTGAAGGGGCTCTGCAGCCCAGAACTACAGA...ATCTGTTTGAACTCTGTCTGTGCCGGGGAATGTACTGTCTGCAAGGTGGCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | GTCCAGACCATTCTCTTCTTCTCCCTTGTCATTCCCCTAATCAACTTGTCCCCAGCATCCTCCCTAGTCTaGAGCAGGGCAGAGAAGTCT | + |
Preference number: 4 (lower is better) Translates to: VQTILFFSLVIPLINLSPASSLV*SRAEKS Trigger: AGACTTCTCTGCCCTGCTGCAGACTAGGGAGGATGC...TGGGGACAAGTTGATTAGGGGAATGACAAGGGAGAAGAAGAGAATGGTCTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | TTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAACTTGGTAGTAAAGTCACGAGATGGACCCTaGCCTCTAGATGCCTCCTGC | + |
Preference number: 4 (lower is better) Translates to: FLSPPAYPILQLRNLVVKSRDGP*PLDASC Trigger: GCAGGAGGCATCTAGAGGGCAGGGTCCATCTCGTGA...CTTTACTACCAAGTTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | TCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAATGCCTACGAATTCCCTaGCTTCATTCAAGGGAGCCC | + |
Preference number: 4 (lower is better) Translates to: SQLSLFVASSLPYPPTKECLRIP*LHSREP Trigger: GGGCTCCCTTGAATGAAGGCAGGGAATTCGTAGGCA...TTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | CAAACTACCCCAGGCAAAGAGTATTCCCACACTCAAATTCTCTTCTCTGGTGCTCGACTTTCCCGACCCTaGCACTCTGGTGCCTACGAA | + |
Preference number: 4 (lower is better) Translates to: QTTPGKEYSHTQILFSGARLSRP*HSGAYE Trigger: TTCGTAGGCACCAGAGTGGCAGGGTCGGGAAAGTCG...AGCACCAGAGAAGAGAATTTGAGTGTGGGAATACTCTTTGCCTGGGGTAGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR GCA 90 bp | GTCCAGACCATTCTCTTCTTCTCCCTTGTCATTCCCCTAATCAACTTGTCCCCAGCTTCCTGGAAACGCTaGGTGCCAGTCACCAAGTTG | + |
Preference number: 4 (lower is better) Translates to: VQTILFFSLVIPLINLSPASWKR*VPVTKL Trigger: CAACTTGGTGACTGGCACGCAGCGTTTCCAGGAAGC...TGGGGACAAGTTGATTAGGGGAATGACAAGGGAGAAGAAGAGAATGGTCTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | CAAACTACCCCAGGCAAAGAGTATTCCCACACTCAAATTCTCTTCTCTGGTGCTGGAGTCCGTGCACCATaGCCACGTTGCTGCCATCAA | + |
Preference number: 4 (lower is better) Translates to: QTTPGKEYSHTQILFSGAGVRAP*PRCCHQ Trigger: TTGATGGCAGCAACGTGGCCATGGTGCACGGACTCC...AGCACCAGAGAAGAGAATTTGAGTGTGGGAATACTCTTTGCCTGGGGTAGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | GTGTGCCACCTTGCAGACAGTACATTCCCCGGCACAGACAGAGTTCAAACAGATAGGGCCTCAGAAAGCTaGTTAATATCCCGGCAGTAC | + |
Preference number: 4 (lower is better) Translates to: VCHLADSTFPGTDRVQTDRASES*LISRQY Trigger: GTACTGCCGGGATATTAACCAGCTTTCTGAGGCCCT...ATCTGTTTGAACTCTGTCTGTGCCGGGGAATGTACTGTCTGCAAGGTGGCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022831.5 |
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CDS-3UTR TCA 90 bp | TCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAACTGAACCCATGTCCCTaGCAGCATCCTGTTTCCTTT | + |
Preference number: 4 (lower is better) Translates to: SQLSLFVASSLPYPPTKELNPCP*QHPVSF Trigger: AAAGGAAACAGGATGCTGTCAGGGACATGGGTTCAG...TTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | TCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAACCTTGGAATCTTTACTaGAGCGCCACTGAGGCACAA | + |
Preference number: 4 (lower is better) Translates to: SQLSLFVASSLPYPPTKEPWNLY*SATEAQ Trigger: TTGTGCCTCAGTGGCGCTTCAGTAAAGATTCCAAGG...TTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | TCAGGTCGCCAATTCTTCCCCTGGATACACATTGGTGACCTGGCAGGAATTCTGGGTCATTGGAGACAATaGTCCCATCCGTTTCTTCAG | + |
Preference number: 4 (lower is better) Translates to: SGRQFFPWIHIGDLAGILGHWRQ*SHPFLQ Trigger: CTGAAGAAACGGATGGGATCATTGTCTCCAATGACC...CAGAATTCCTGCCAGGTCACCAATGTGTATCCAGGGGAAGAATTGGCGACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | GTGTGCCACCTTGCAGACAGTACATTCCCCGGCACAGACAGAGTTCAAACAGATGATATGAGGATTCTCTaGGCAGTCTTTGGAGAGGAC | + |
Preference number: 4 (lower is better) Translates to: VCHLADSTFPGTDRVQTDDMRIL*AVFGED Trigger: GTCCTCTCCAAAGACTGCCCAGAGAATCCTCATATC...ATCTGTTTGAACTCTGTCTGTGCCGGGGAATGTACTGTCTGCAAGGTGGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | ACCCAAGGAAACAGACAAAGACACTGGGACCCAGAGAGCCACATAGTTAACTCCGCCAGATCCCGGAACTaGTCATTGGAGACAATGATC | + |
Preference number: 4 (lower is better) Translates to: TQGNRQRHWDPESHIVNSARSRN*SLETMI Trigger: GATCATTGTCTCCAATGACCAGTTCCGGGATCTGGC...GGAGTTAACTATGTGGCTCTCTGGGTCCCAGTGTCTTTGTCTGTTTCCTTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | TCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAAACCCTGCTTCCTGACTaGCTTCTTCAGGAACTCATC | + |
Preference number: 4 (lower is better) Translates to: SQLSLFVASSLPYPPTKETLLPD*LLQELI Trigger: GATGAGTTCCTGAAGAAGCCAGTCAGGAAGCAGGGT...TTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022831.5 |
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CDS-3UTR TCA 90 bp | TCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAACAGCCAGCTTCACCATaGACCTGTCATCATAAGAAG | + |
Preference number: 4 (lower is better) Translates to: SQLSLFVASSLPYPPTKEQPASP*TCHHKK Trigger: CTTCTTATGATGACAGGTTCATGGTGAAGCTGGCTG...TTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | CCAGGCAAAGAGTATTCCCACACTCAAATTCTCTTCTCTGGTGCTTCCTCTGGCGGTCATTGGAGACAATaGTCCCATCCGTTTCTTCAG | + |
Preference number: 4 (lower is better) Translates to: PGKEYSHTQILFSGASSGGHWRQ*SHPFLQ Trigger: CTGAAGAAACGGATGGGATCATTGTCTCCAATGACC...GCCAGAGGAAGCACCAGAGAAGAGAATTTGAGTGTGGGAATACTCTTTGCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | AAACAGATACAGAGCAATGACTTGTGGGAGTTAGAATGTAAACAGCTTGTCATGGAGGCGCTCCCATTGTaGAGCCGCTGGAGGAGAGAG | + |
Preference number: 4 (lower is better) Translates to: KQIQSNDLWELECKQLVMEALPL*SRWRRE Trigger: CTCTCTCCTCCAGCGGCTCCACAATGGGAGCGCCTC...CATGACAAGCTGTTTACATTCTAACTCCCACAAGTCATTGCTCTGTATCTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | CAAACTACCCCAGGCAAAGAGTATTCCCACACTCAAATTCTCTTCTCTGGTGCTGCCATTTCGTCCCAGTaGGTCATCTGGGACCATGAA | + |
Preference number: 4 (lower is better) Translates to: QTTPGKEYSHTQILFSGAAISSQ*VIWDHE Trigger: TTCATGGTCCCAGATGACCCACTGGGACGAAATGGC...AGCACCAGAGAAGAGAATTTGAGTGTGGGAATACTCTTTGCCTGGGGTAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022831.5 |
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CDS-3UTR TCA 90 bp | AAACAGATACAGAGCAATGACTTGTGGGAGTTAGAATGTAAACAGCTTGTCATGGTTCACCCTGCACACTaGACCCTCCTCTTTGCTGAG | + |
Preference number: 4 (lower is better) Translates to: KQIQSNDLWELECKQLVMVHPAH*TLLFAE Trigger: CTCAGCAAAGAGGAGGGTTCAGTGTGCAGGGTGAAC...CATGACAAGCTGTTTACATTCTAACTCCCACAAGTCATTGCTCTGTATCTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CCA 90 bp | AAACAGATACAGAGCAATGACTTGTGGGAGTTAGAATGTAAACAGCTTGTCATGTTGTCCTCTTACTGCTaGCGACTTTCCCGACCCTGC | + |
Preference number: 4 (lower is better) Translates to: KQIQSNDLWELECKQLVMLSSYC*RLSRPC Trigger: GCAGGGTCGGGAAAGTCGCCAGCAGTAAGAGGACAA...CATGACAAGCTGTTTACATTCTAACTCCCACAAGTCATTGCTCTGTATCTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR TCA 90 bp | AAACAGATACAGAGCAATGACTTGTGGGAGTTAGAATGTAAACAGCTTGTCATGTTACTGAAGCGCCACTaGGGCACAAAGACGGTTATG | + |
Preference number: 4 (lower is better) Translates to: KQIQSNDLWELECKQLVMLLKRH*GTKTVM Trigger: CATAACCGTCTTTGTGCCTCAGTGGCGCTTCAGTAA...CATGACAAGCTGTTTACATTCTAACTCCCACAAGTCATTGCTCTGTATCTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR CAA 72 bp | GCACAGACAGAGTTCAAACAGATACAGAGCAATGACTaGTGGGAGTTAGAATGTAAACAGCTTGTCATGACA | + |
Preference number: 4 (lower is better) Translates to: AQTEFKQIQSND*WELECKQLVMT Trigger: TGTCATGACAAGCTGTTTACATTCTAACTCCCACAAGTCATTGCTCTGTATCTGTTTGAACTCTGTCTGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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3UTR CAA 72 bp | CTCTTCAACTTCTTCTGTGGCTTCTGTGTTACATTGTaGCCCTGGTTCTCATATATGCTGTGTAGACAATGT | + |
Preference number: 4 (lower is better) Translates to: LFNFFCGFCVTL*PWFSYMLCRQC Trigger: ACATTGTCTACACAGCATATATGAGAACCAGGGCAACAATGTAACACAGAAGCCACAGAAGAAGTTGAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS TCA 90 bp | CCATGGGGGTTCCGGCGCGGGCGGAGGGCTAGGCACTCTCGGAGGTaGGGCGCTCCCATTGTGGAGCCGCTGGAGGAGAGAGGCTCCCCG | + |
Preference number: 5 (lower is better) Translates to: PWGFRRGRRARHSRR*GAPIVEPLEERGSP Trigger: CGGGGAGCCTCTCTCCTCCAGCGGCTCCACAATGGGAGCGCCTCACCTCCGAGAGTGCCTAGCCCTCCGCCCGCGCCGGAACCCCCATGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 90 bp | GCGGGCGGAGGGCTAGGCACTCTCGGAGGTGAGGCGCTCCCATTGTaGAGCCGCTGGAGGAGAGAGGCTCCCCGGATTGGAGCTGCCCTC | + |
Preference number: 5 (lower is better) Translates to: AGGGLGTLGGEALPL*SRWRREAPRIGAAL Trigger: GAGGGCAGCTCCAATCCGGGGAGCCTCTCTCCTCCAGCGGCTCCACAATGGGAGCGCCTCACCTCCGAGAGTGCCTAGCCCTCCGCCCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 90 bp | GAGCTCCCCACCTCACGAGATGGACCCTGCCCTCTAGATGCCTCCTaGACCAGGCTTAGGAGCTCCTCCTGCACGGCCAGGGGCAGCCGC | + |
Preference number: 5 (lower is better) Translates to: ELPTSRDGPCPLDAS*TRLRSSSCTARGSR Trigger: GCGGCTGCCCCTGGCCGTGCAGGAGGAGCTCCTAAGCCTGGTGCAGGAGGCATCTAGAGGGCAGGGTCCATCTCGTGAGGTGGGGAGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 90 bp | CGAGTGCCTCGCTTCCACGGAGACCCTCGGCCTCGAGCTCCAGCCTaGTGCTTGTCTCCCCTGTCTCCCCGATCTCGATCTCGGTCTCGG | + |
Preference number: 5 (lower is better) Translates to: RVPRFHGDPRPRAPA*CLSPLSPRSRSRSR Trigger: CCGAGACCGAGATCGAGATCGGGGAGACAGGGGAGACAAGCAGCAGGCTGGAGCTCGAGGCCGAGGGTCTCCGTGGAAGCGAGGCACTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 90 bp | GTGCCTCGCTTCCACGGAGACCCTCGGCCTCGAGCTCCAGCCTGCTaGTTGTCTCCCCTGTCTCCCCGATCTCGATCTCGGTCTCGGTCT | + |
Preference number: 5 (lower is better) Translates to: VPRFHGDPRPRAPAC*LSPLSPRSRSRSRS Trigger: AGACCGAGACCGAGATCGAGATCGGGGAGACAGGGGAGACAAGCAGCAGGCTGGAGCTCGAGGCCGAGGGTCTCCGTGGAAGCGAGGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 90 bp | CTTCCTGGAAACGCTGCGTGCCAGTCACCAAGTTGCCCCCACGAGTaGCTCGCTTCCACGGAGACCCTCGGCCTCGAGCTCCAGCCTGCT | + |
Preference number: 5 (lower is better) Translates to: LPGNAACQSPSCPHE*LASTETLGLELQPA Trigger: AGCAGGCTGGAGCTCGAGGCCGAGGGTCTCCGTGGAAGCGAGGCACTCGTGGGGGCAACTTGGTGACTGGCACGCAGCGTTTCCAGGAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 90 bp | TGGAGCCGCTGGAGGAGAGAGGCTCCCCGGATTGGAGCTGCCCTCTaGCAGGGCACATGCGCACCTGAAGGTTCACCCTGCACACTGAAC | + |
Preference number: 5 (lower is better) Translates to: WSRWRREAPRIGAAL*QGTCAPEGSPCTLN Trigger: GTTCAGTGTGCAGGGTGAACCTTCAGGTGCGCATGTGCCCTGTCAGAGGGCAGCTCCAATCCGGGGAGCCTCTCTCCTCCAGCGGCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 90 bp | GATCCTGTAAGGCTTCCTGGAAACGCTGCGTGCCAGTCACCAAGTTaGCCCCACGAGTGCCTCGCTTCCACGGAGACCCTCGGCCTCGAG | + |
Preference number: 5 (lower is better) Translates to: DPVRLPGNAACQSPS*PHECLASTETLGLE Trigger: CTCGAGGCCGAGGGTCTCCGTGGAAGCGAGGCACTCGTGGGGGCAACTTGGTGACTGGCACGCAGCGTTTCCAGGAAGCCTTACAGGATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 90 bp | CTCAGCACTCCGCCATTGTCAGGGGCTCCGGGACAAGACTGTAGCTaGAGGTCCCAGCTCAGCCGTTGCACTAACTCCTCCACCCGGCTC | + |
Preference number: 5 (lower is better) Translates to: LSTPPLSGAPGQDCS*RSQLSRCTNSSTRL Trigger: GAGCCGGGTGGAGGAGTTAGTGCAACGGCTGAGCTGGGACCTTCAGCTACAGTCTTGTCCCGGAGCCCCTGACAATGGCGGAGTGCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 90 bp | GGCTCCCCGGATTGGAGCTGCCCTCTGACAGGGCACATGCGCACCTaGAGGTTCACCCTGCACACTGAACCCTCCTCTTTGCTGAGGAAC | + |
Preference number: 5 (lower is better) Translates to: GSPDWSCPLTGHMRT*RFTLHTEPSSLLRN Trigger: GTTCCTCAGCAAAGAGGAGGGTTCAGTGTGCAGGGTGAACCTTCAGGTGCGCATGTGCCCTGTCAGAGGGCAGCTCCAATCCGGGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 90 bp | AGGACGCTCATTCCCACGTTGAAGATACGCTCCAAGCGAGTCTGCTaGTCCCGAACCTTGTCCTCGGCCTCCGCAGACACCGCAAAGCGG | + |
Preference number: 5 (lower is better) Translates to: RTLIPTLKIRSKRVC*SRTLSSASADTAKR Trigger: CCGCTTTGCGGTGTCTGCGGAGGCCGAGGACAAGGTTCGGGAGCAGCAGACTCGCTTGGAGCGTATCTTCAACGTGGGAATGAGCGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 90 bp | CCCTCTGACAGGGCACATGCGCACCTGAAGGTTCACCCTGCACACTaGACCCTCCTCTTTGCTGAGGAACCTCCTGTTTCCCCGAGGCCT | + |
Preference number: 5 (lower is better) Translates to: PSDRAHAHLKVHPAH*TLLFAEEPPVSPRP Trigger: AGGCCTCGGGGAAACAGGAGGTTCCTCAGCAAAGAGGAGGGTTCAGTGTGCAGGGTGAACCTTCAGGTGCGCATGTGCCCTGTCAGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 90 bp | GAGAGGACGCTCATTCCCACGTTGAAGATACGCTCCAAGCGAGTCTaGTGCTCCCGAACCTTGTCCTCGGCCTCCGCAGACACCGCAAAG | + |
Preference number: 5 (lower is better) Translates to: ERTLIPTLKIRSKRV*CSRTLSSASADTAK Trigger: CTTTGCGGTGTCTGCGGAGGCCGAGGACAAGGTTCGGGAGCAGCAGACTCGCTTGGAGCGTATCTTCAACGTGGGAATGAGCGTCCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 90 bp | GCAAGGCACAGGGTGAAAGGATCCTGTAAGGCTTCCTGGAAACGCTaGGTGCCAGTCACCAAGTTGCCCCCACGAGTGCCTCGCTTCCAC | + |
Preference number: 5 (lower is better) Translates to: ARHRVKGSCKASWKR*VPVTKLPPRVPRFH Trigger: GTGGAAGCGAGGCACTCGTGGGGGCAACTTGGTGACTGGCACGCAGCGTTTCCAGGAAGCCTTACAGGATCCTTTCACCCTGTGCCTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | GCCAGAGGGTGCTTTCTTTCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCGAGAGGCTCCCCGGATaGGAGCTGCCCTCTGACAGG | + |
Preference number: 5 (lower is better) Translates to: ARGCFLSQLSLFVASSLPERLPG*ELPSDR Trigger: CCTGTCAGAGGGCAGCTCCAATCCGGGGAGCCTCTC...GGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGAAAGAAAGCACCCTCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 90 bp | ACGAATTCCCTGCCTTCATTCAAGGGAGCCCTGACTCCCTGGAACTaGGGACTCAACAGGCCTGAGCTCCCCACCTCACGAGATGGACCC | + |
Preference number: 5 (lower is better) Translates to: TNSLPSFKGALTPWN*GLNRPELPTSRDGP Trigger: GGGTCCATCTCGTGAGGTGGGGAGCTCAGGCCTGTTGAGTCCTCAGTTCCAGGGAGTCAGGGCTCCCTTGAATGAAGGCAGGGAATTCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 90 bp | GGCACATTGGCAAGGCACAGGGTGAAAGGATCCTGTAAGGCTTCCTaGAAACGCTGCGTGCCAGTCACCAAGTTGCCCCCACGAGTGCCT | + |
Preference number: 5 (lower is better) Translates to: GTLARHRVKGSCKAS*KRCVPVTKLPPRVP Trigger: AGGCACTCGTGGGGGCAACTTGGTGACTGGCACGCAGCGTTTCCAGGAAGCCTTACAGGATCCTTTCACCCTGTGCCTTGCCAATGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 90 bp | TGTGACGGAGATCTGGCTGGCCAGGCACATTGGCAAGGCACAGGGTaGAAGGATCCTGTAAGGCTTCCTGGAAACGCTGCGTGCCAGTCA | + |
Preference number: 5 (lower is better) Translates to: CDGDLAGQAHWQGTG*KDPVRLPGNAACQS Trigger: TGACTGGCACGCAGCGTTTCCAGGAAGCCTTACAGGATCCTTTCACCCTGTGCCTTGCCAATGTGCCTGGCCAGCCAGATCTCCGTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 90 bp | GGCCACGGTCCCAGAAGTACTGTACAGCGAGAGCAATACCCCGACTaGAAAAGTAATGCTGGAGTCCGTGCACCATGGCCACGTTGCTGC | + |
Preference number: 5 (lower is better) Translates to: GHGPRSTVQREQYPD*KSNAGVRAPWPRCC Trigger: GCAGCAACGTGGCCATGGTGCACGGACTCCAGCATTACTTTTCCAGTCGGGGTATTGCTCTCGCTGTACAGTACTTCTGGGACCGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | TCTCATCTTCTCAGGAACACTCAGCCTTCCAGGGCACTCAGGGAAGGGAAGATATGCTGCTCCCGAACCTaGTCCTCGGCCTCCGCAGAC | + |
Preference number: 5 (lower is better) Translates to: SHLLRNTQPSRALREGKICCSRT*SSASAD Trigger: GTCTGCGGAGGCCGAGGACAAGGTTCGGGAGCAGCA...TATCTTCCCTTCCCTGAGTGCCCTGGAAGGCTGAGTGTTCCTGAGAAGATGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | CCTTCATACCTGTCCCCAGCACTGTGGTACGAGCGGTCTTTGGAGAACGTGCCATTCTCTGGGCAGTCTTaGGAGAGGACGCTCATTCCC | + |
Preference number: 5 (lower is better) Translates to: PSYLSPALWYERSLENVPFSGQS*ERTLIP Trigger: GGGAATGAGCGTCCTCTCCAAAGACTGCCCAGAGAA...TGGCACGTTCTCCAAAGACCGCTCGTACCACAGTGCTGGGGACAGGTATGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | TCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAAGGTGAGGCGCTCCCATaGTGGAGCCGCTGGAGGAGA | + |
Preference number: 5 (lower is better) Translates to: SQLSLFVASSLPYPPTKEGEALP*WSRWRR Trigger: TCTCCTCCAGCGGCTCCACAATGGGAGCGCCTCACC...TTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | ACCCAAGGAAACAGACAAAGACACTGGGACCCAGAGAGCCACATAGTTAACTCCGTGCCAGTCACCAAGTaGCCCCCACGAGTGCCTCGC | + |
Preference number: 5 (lower is better) Translates to: TQGNRQRHWDPESHIVNSVPVTK*PPRVPR Trigger: GCGAGGCACTCGTGGGGGCAACTTGGTGACTGGCAC...GGAGTTAACTATGTGGCTCTCTGGGTCCCAGTGTCTTTGTCTGTTTCCTTGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | AGTAAGGAGTGTGCCACCTTGCAGACAGTACATTCCCCGGCACAGACAGAGTTCGGCTGGCCAGGCACATaGGCAAGGCACAGGGTGAAA | + |
Preference number: 5 (lower is better) Translates to: SKECATLQTVHSPAQTEFGWPGT*ARHRVK Trigger: TTTCACCCTGTGCCTTGCCAATGTGCCTGGCCAGCC...GAACTCTGTCTGTGCCGGGGAATGTACTGTCTGCAAGGTGGCACACTCCTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 90 bp | GAGGATTCTCTGGGCAGTCTTTGGAGAGGACGCTCATTCCCACGTTaGAGATACGCTCCAAGCGAGTCTGCTGCTCCCGAACCTTGTCCT | + |
Preference number: 5 (lower is better) Translates to: EDSLGSLWRGRSFPR*RYAPSESAAPEPCP Trigger: AGGACAAGGTTCGGGAGCAGCAGACTCGCTTGGAGCGTATCTTCAACGTGGGAATGAGCGTCCTCTCCAAAGACTGCCCAGAGAATCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 90 bp | TCCAGGCCAGGCAGTCAAGGAAGAAACCGTGGGCTCCCAGAAAGATaGAGTGCAGTCTGGGTGGGTAGTGGATCTCACTCTGTAGTTCTG | + |
Preference number: 5 (lower is better) Translates to: SRPGSQGRNRGLPER*SAVWVGSGSHSVVL Trigger: CAGAACTACAGAGTGAGATCCACTACCCACCCAGACTGCACTGCATCTTTCTGGGAGCCCACGGTTTCTTCCTTGACTGCCTGGCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 90 bp | TGCAGAGCCCCTTCAGGTATTCCTTGGCTCTGCAGACGTTCTCCTTaGGGCCCTCAAGCTGCAACCAGATATGAGGATTCTCTGGGCAGT | + |
Preference number: 5 (lower is better) Translates to: CRAPSGIPWLCRRSP*GPQAATRYEDSLGS Trigger: ACTGCCCAGAGAATCCTCATATCTGGTTGCAGCTTGAGGGCCCCAAGGAGAACGTCTGCAGAGCCAAGGAATACCTGAAGGGGCTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | GTCCAGACCATTCTCTTCTTCTCCCTTGTCATTCCCCTAATCAACTTGTCCCCATGCTGCTCCCGAACCTaGTCCTCGGCCTCCGCAGAC | + |
Preference number: 5 (lower is better) Translates to: VQTILFFSLVIPLINLSPCCSRT*SSASAD Trigger: GTCTGCGGAGGCCGAGGACAAGGTTCGGGAGCAGCA...TGGGGACAAGTTGATTAGGGGAATGACAAGGGAGAAGAAGAGAATGGTCTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | CGAGGGAGTGGACAGTGGACATCTCTGAATGTGAAGTTCTGGCTAGGGAGCCTGTTCTCTGGGCAGTCTTaGGAGAGGACGCTCATTCCC | + |
Preference number: 5 (lower is better) Translates to: RGSGQWTSLNVKFWLGSLFSGQS*ERTLIP Trigger: GGGAATGAGCGTCCTCTCCAAAGACTGCCCAGAGAA...CAGGCTCCCTAGCCAGAACTTCACATTCAGAGATGTCCACTGTCCACTCCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | TGTTGGAAGGGCAAAAAGTGGTCCCTCGGCGGACACTGGCTACTGGCTACCAGTATGATCGCCATCCACTaGTCAGACTCCTCAGCCAGA | + |
Preference number: 5 (lower is better) Translates to: CWKGKKWSLGGHWLLATSMIAIH*SDSSAR Trigger: TCTGGCTGAGGAGTCTGACAAGTGGATGGCGATCAT...ACTGGTAGCCAGTAGCCAGTGTCCGCCGAGGGACCACTTTTTGCCCTTCCAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228462.2 |
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CDS GCA 90 bp | CACAGTATGACTTTGTCCTCTTACTGCTGGCGACTTTCCCGACCCTaGCACTCTGGTGCCTACGAATTCCCTGCCTTCATTCAAGGGAGC | + |
Preference number: 5 (lower is better) Translates to: HSMTLSSYCWRLSRP*HSGAYEFPAFIQGS Trigger: GCTCCCTTGAATGAAGGCAGGGAATTCGTAGGCACCAGAGTGGCAGGGTCGGGAAAGTCGCCAGCAGTAAGAGGACAAAGTCATACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | CAAACTACCCCAGGCAAAGAGTATTCCCACACTCAAATTCTCTTCTCTGGTGCTGGTGAGGCGCTCCCATaGTGGAGCCGCTGGAGGAGA | + |
Preference number: 5 (lower is better) Translates to: QTTPGKEYSHTQILFSGAGEALP*WSRWRR Trigger: TCTCCTCCAGCGGCTCCACAATGGGAGCGCCTCACC...AGCACCAGAGAAGAGAATTTGAGTGTGGGAATACTCTTTGCCTGGGGTAGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | CAAACTACCCCAGGCAAAGAGTATTCCCACACTCAAATTCTCTTCTCTGGTGCTGCTCCAGCCTGCTGCTaGTCTCCCCTGTCTCCCCGA | + |
Preference number: 5 (lower is better) Translates to: QTTPGKEYSHTQILFSGAAPACC*SPLSPR Trigger: TCGGGGAGACAGGGGAGACAAGCAGCAGGCTGGAGC...AGCACCAGAGAAGAGAATTTGAGTGTGGGAATACTCTTTGCCTGGGGTAGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | GGGAGCCTTCTCTGTTCTCATTTCCCTCAACGGTTATCTTTATGCCTGATGTGTGTGCCAGTCACCAAGTaGCCCCCACGAGTGCCTCGC | + |
Preference number: 5 (lower is better) Translates to: GSLLCSHFPQRLSLCLMCVPVTK*PPRVPR Trigger: GCGAGGCACTCGTGGGGGCAACTTGGTGACTGGCAC...ACACATCAGGCATAAAGATAACCGTTGAGGGAAATGAGAACAGAGAAGGCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | ACCCAAGGAAACAGACAAAGACACTGGGACCCAGAGAGCCACATAGTTAACTCCGGCTGGCCAGGCACATaGGCAAGGCACAGGGTGAAA | + |
Preference number: 5 (lower is better) Translates to: TQGNRQRHWDPESHIVNSGWPGT*ARHRVK Trigger: TTTCACCCTGTGCCTTGCCAATGTGCCTGGCCAGCC...GGAGTTAACTATGTGGCTCTCTGGGTCCCAGTGTCTTTGTCTGTTTCCTTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | GGAGCAGCCAGAGGGTGCTTTCTTTCTCAGCTTAGCCTTTTTGTCGCCTCCAGCTCCCGGAACTGGTCATaGGAGACAATGATCCCATCC | + |
Preference number: 5 (lower is better) Translates to: GAARGCFLSQLSLFVASSSRNWS*ETMIPS Trigger: GGATGGGATCATTGTCTCCAATGACCAGTTCCGGGA...GCTGGAGGCGACAAAAAGGCTAAGCTGAGAAAGAAAGCACCCTCTGGCTGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 90 bp | GTTCTCCTTGGGGCCCTCAAGCTGCAACCAGATATGAGGATTCTCTaGGCAGTCTTTGGAGAGGACGCTCATTCCCACGTTGAAGATACG | + |
Preference number: 5 (lower is better) Translates to: VLLGALKLQPDMRIL*AVFGEDAHSHVEDT Trigger: CGTATCTTCAACGTGGGAATGAGCGTCCTCTCCAAAGACTGCCCAGAGAATCCTCATATCTGGTTGCAGCTTGAGGGCCCCAAGGAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | TCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAATTCCGAATGCCACCATaGCTCCTGTCCGCGTCCTTC | + |
Preference number: 5 (lower is better) Translates to: SQLSLFVASSLPYPPTKEFRMPP*LLSASF Trigger: GAAGGACGCGGACAGGAGCAATGGTGGCATTCGGAA...TTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022831.5 |
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CDS CCA 90 bp | TTTCCTTTCCTCCTTCTCCACAGTATGACTTTGTCCTCTTACTGCTaGCGACTTTCCCGACCCTGCCACTCTGGTGCCTACGAATTCCCT | + |
Preference number: 5 (lower is better) Translates to: FPFLLLHSMTLSSYC*RLSRPCHSGAYEFP Trigger: AGGGAATTCGTAGGCACCAGAGTGGCAGGGTCGGGAAAGTCGCCAGCAGTAAGAGGACAAAGTCATACTGTGGAGAAGGAGGAAAGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 90 bp | ATGATCGCCATCCACTTGTCAGACTCCTCAGCCAGATCCCGGAACTaGTCATTGGAGACAATGATCCCATCCGTTTCTTCAGCCAGCTTC | + |
Preference number: 5 (lower is better) Translates to: MIAIHLSDSSARSRN*SLETMIPSVSSASF Trigger: GAAGCTGGCTGAAGAAACGGATGGGATCATTGTCTCCAATGACCAGTTCCGGGATCTGGCTGAGGAGTCTGACAAGTGGATGGCGATCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | TCTCAGCTTAGCCTTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAATCCCGGAACTGGTCATaGGAGACAATGATCCCATCC | + |
Preference number: 5 (lower is better) Translates to: SQLSLFVASSLPYPPTKESRNWS*ETMIPS Trigger: GGATGGGATCATTGTCTCCAATGACCAGTTCCGGGA...TTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAAGGCTAAGCTGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS-3UTR CAA 90 bp | TTTTTGTCGCCTCCAGCCTACCCTATCCTCCAACTAAGGAACTTGGTAGTAAAGATGATCGCCATCCACTaGTCAGACTCCTCAGCCAGA | + |
Preference number: 5 (lower is better) Translates to: FLSPPAYPILQLRNLVVKMIAIH*SDSSAR Trigger: TCTGGCTGAGGAGTCTGACAAGTGGATGGCGATCAT...CTTTACTACCAAGTTCCTTAGTTGGAGGATAGGGTAGGCTGGAGGCGACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 90 bp | GAACCTGTCATCATAAGAAGAAATCCTCTTGCCATCCATGACTCGTaGGGGTGTCAGGGAAAGCAGACTCAGGGAATACAACTTCTGCAG | + |
Preference number: 5 (lower is better) Translates to: EPVIIRRNPLAIHDS*GCQGKQTQGIQLLQ Trigger: CTGCAGAAGTTGTATTCCCTGAGTCTGCTTTCCCTGACACCCTCACGAGTCATGGATGGCAAGAGGATTTCTTCTTATGATGACAGGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CAA 90 bp | GGCGCGGGCGGAGGGCTAGGCACTCTCGGAGGTGAGGCGCTCCCATaGTGGAGCCGCTGGAGGAGAGAGGCTCCCCGGATTGGAGCTGCC | + |
Preference number: 6 (lower is better) Translates to: GAGGGLGTLGGEALP*WSRWRREAPRIGAA Trigger: GGCAGCTCCAATCCGGGGAGCCTCTCTCCTCCAGCGGCTCCACAATGGGAGCGCCTCACCTCCGAGAGTGCCTAGCCCTCCGCCCGCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 72 bp | TTCCGGCGCGGGCGGAGGGCTAGGCACTCTCGGAGGTaGGGCGCTCCCATTGTGGAGCCGCTGGAGGAGAGA | + |
Preference number: 6 (lower is better) Translates to: FRRGRRARHSRR*GAPIVEPLEER Trigger: TCTCTCCTCCAGCGGCTCCACAATGGGAGCGCCTCACCTCCGAGAGTGCCTAGCCCTCCGCCCGCGCCGGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 72 bp | CCGATCTCGATCTCGGTCTCGGTCTCCACAGGGCCATaGGGGTTCCGGCGCGGGCGGAGGGCTAGGCACTCT | + |
Preference number: 6 (lower is better) Translates to: PISISVSVSTGP*GFRRGRRARHS Trigger: AGAGTGCCTAGCCCTCCGCCCGCGCCGGAACCCCCATGGCCCTGTGGAGACCGAGACCGAGATCGAGATCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 72 bp | ACTCTCGGAGGTGAGGCGCTCCCATTGTGGAGCCGCTaGAGGAGAGAGGCTCCCCGGATTGGAGCTGCCCTC | + |
Preference number: 6 (lower is better) Translates to: TLGGEALPLWSR*RREAPRIGAAL Trigger: GAGGGCAGCTCCAATCCGGGGAGCCTCTCTCCTCCAGCGGCTCCACAATGGGAGCGCCTCACCTCCGAGAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 72 bp | GGGCTAGGCACTCTCGGAGGTGAGGCGCTCCCATTGTaGAGCCGCTGGAGGAGAGAGGCTCCCCGGATTGGA | + |
Preference number: 6 (lower is better) Translates to: GLGTLGGEALPL*SRWRREAPRIG Trigger: TCCAATCCGGGGAGCCTCTCTCCTCCAGCGGCTCCACAATGGGAGCGCCTCACCTCCGAGAGTGCCTAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CAA 90 bp | CCTCGCTTCCACGGAGACCCTCGGCCTCGAGCTCCAGCCTGCTGCTaGTCTCCCCTGTCTCCCCGATCTCGATCTCGGTCTCGGTCTCCA | + |
Preference number: 6 (lower is better) Translates to: PRFHGDPRPRAPACC*SPLSPRSRSRSRSP Trigger: TGGAGACCGAGACCGAGATCGAGATCGGGGAGACAGGGGAGACAAGCAGCAGGCTGGAGCTCGAGGCCGAGGGTCTCCGTGGAAGCGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 72 bp | TTCCACGGAGACCCTCGGCCTCGAGCTCCAGCCTGCTaGTTGTCTCCCCTGTCTCCCCGATCTCGATCTCGG | + |
Preference number: 6 (lower is better) Translates to: FHGDPRPRAPAC*LSPLSPRSRSR Trigger: CCGAGATCGAGATCGGGGAGACAGGGGAGACAAGCAGCAGGCTGGAGCTCGAGGCCGAGGGTCTCCGTGGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 72 bp | CGCTTCCACGGAGACCCTCGGCCTCGAGCTCCAGCCTaGTGCTTGTCTCCCCTGTCTCCCCGATCTCGATCT | + |
Preference number: 6 (lower is better) Translates to: RFHGDPRPRAPA*CLSPLSPRSRS Trigger: AGATCGAGATCGGGGAGACAGGGGAGACAAGCAGCAGGCTGGAGCTCGAGGCCGAGGGTCTCCGTGGAAGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CAA 72 bp | CATTGTGGAGCCGCTGGAGGAGAGAGGCTCCCCGGATaGGAGCTGCCCTCTGACAGGGCACATGCGCACCTG | + |
Preference number: 6 (lower is better) Translates to: HCGAAGGERLPG*ELPSDRAHAHL Trigger: CAGGTGCGCATGTGCCCTGTCAGAGGGCAGCTCCAATCCGGGGAGCCTCTCTCCTCCAGCGGCTCCACAATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CAA 72 bp | CACGGAGACCCTCGGCCTCGAGCTCCAGCCTGCTGCTaGTCTCCCCTGTCTCCCCGATCTCGATCTCGGTCT | + |
Preference number: 6 (lower is better) Translates to: HGDPRPRAPACC*SPLSPRSRSRS Trigger: AGACCGAGATCGAGATCGGGGAGACAGGGGAGACAAGCAGCAGGCTGGAGCTCGAGGCCGAGGGTCTCCGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CAA 90 bp | CCCACGTTGAAGATACGCTCCAAGCGAGTCTGCTGCTCCCGAACCTaGTCCTCGGCCTCCGCAGACACCGCAAAGCGGTCGGGAGTCGGG | + |
Preference number: 6 (lower is better) Translates to: PTLKIRSKRVCCSRT*SSASADTAKRSGVG Trigger: CCCGACTCCCGACCGCTTTGCGGTGTCTGCGGAGGCCGAGGACAAGGTTCGGGAGCAGCAGACTCGCTTGGAGCGTATCTTCAACGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CAA 90 bp | AGGCGCTCCCATTGTGGAGCCGCTGGAGGAGAGAGGCTCCCCGGATaGGAGCTGCCCTCTGACAGGGCACATGCGCACCTGAAGGTTCAC | + |
Preference number: 6 (lower is better) Translates to: RRSHCGAAGGERLPG*ELPSDRAHAHLKVH Trigger: GTGAACCTTCAGGTGCGCATGTGCCCTGTCAGAGGGCAGCTCCAATCCGGGGAGCCTCTCTCCTCCAGCGGCTCCACAATGGGAGCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 72 bp | ACCTCACGAGATGGACCCTGCCCTCTAGATGCCTCCTaGACCAGGCTTAGGAGCTCCTCCTGCACGGCCAGG | + |
Preference number: 6 (lower is better) Translates to: TSRDGPCPLDAS*TRLRSSSCTAR Trigger: CCTGGCCGTGCAGGAGGAGCTCCTAAGCCTGGTGCAGGAGGCATCTAGAGGGCAGGGTCCATCTCGTGAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 72 bp | AGGCTTCCTGGAAACGCTGCGTGCCAGTCACCAAGTTaGCCCCACGAGTGCCTCGCTTCCACGGAGACCCTC | + |
Preference number: 6 (lower is better) Translates to: RLPGNAACQSPS*PHECLASTETL Trigger: GAGGGTCTCCGTGGAAGCGAGGCACTCGTGGGGGCAACTTGGTGACTGGCACGCAGCGTTTCCAGGAAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CAA 90 bp | GGATCCTGTAAGGCTTCCTGGAAACGCTGCGTGCCAGTCACCAAGTaGCCCCCACGAGTGCCTCGCTTCCACGGAGACCCTCGGCCTCGA | + |
Preference number: 6 (lower is better) Translates to: GSCKASWKRCVPVTK*PPRVPRFHGDPRPR Trigger: TCGAGGCCGAGGGTCTCCGTGGAAGCGAGGCACTCGTGGGGGCAACTTGGTGACTGGCACGCAGCGTTTCCAGGAAGCCTTACAGGATCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 72 bp | AGCCCTGACTCCCTGGAACTGAGGACTCAACAGGCCTaGGCTCCCCACCTCACGAGATGGACCCTGCCCTCT | + |
Preference number: 6 (lower is better) Translates to: SPDSLELRTQQA*APHLTRWTLPS Trigger: AGAGGGCAGGGTCCATCTCGTGAGGTGGGGAGCTCAGGCCTGTTGAGTCCTCAGTTCCAGGGAGTCAGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CAA 72 bp | AAGATACGCTCCAAGCGAGTCTGCTGCTCCCGAACCTaGTCCTCGGCCTCCGCAGACACCGCAAAGCGGTCG | + |
Preference number: 6 (lower is better) Translates to: KIRSKRVCCSRT*SSASADTAKRS Trigger: CGACCGCTTTGCGGTGTCTGCGGAGGCCGAGGACAAGGTTCGGGAGCAGCAGACTCGCTTGGAGCGTATCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 72 bp | CCGCCATTGTCAGGGGCTCCGGGACAAGACTGTAGCTaGAGGTCCCAGCTCAGCCGTTGCACTAACTCCTCC | + |
Preference number: 6 (lower is better) Translates to: PPLSGAPGQDCS*RSQLSRCTNSS Trigger: GGAGGAGTTAGTGCAACGGCTGAGCTGGGACCTTCAGCTACAGTCTTGTCCCGGAGCCCCTGACAATGGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 72 bp | CAGCTCAGCCGTTGCACTAACTCCTCCACCCGGCTCTaGGCCATCACAAACGCCTCGGTTAGGCCACTGATC | + |
Preference number: 6 (lower is better) Translates to: QLSRCTNSSTRL*AITNASVRPLI Trigger: GATCAGTGGCCTAACCGAGGCGTTTGTGATGGCCCAGAGCCGGGTGGAGGAGTTAGTGCAACGGCTGAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 72 bp | CTGCCTTCATTCAAGGGAGCCCTGACTCCCTGGAACTaGGGACTCAACAGGCCTGAGCTCCCCACCTCACGA | + |
Preference number: 6 (lower is better) Translates to: LPSFKGALTPWN*GLNRPELPTSR Trigger: TCGTGAGGTGGGGAGCTCAGGCCTGTTGAGTCCTCAGTTCCAGGGAGTCAGGGCTCCCTTGAATGAAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 72 bp | ATTCCCACGTTGAAGATACGCTCCAAGCGAGTCTGCTaGTCCCGAACCTTGTCCTCGGCCTCCGCAGACACC | + |
Preference number: 6 (lower is better) Translates to: IPTLKIRSKRVC*SRTLSSASADT Trigger: GGTGTCTGCGGAGGCCGAGGACAAGGTTCGGGAGCAGCAGACTCGCTTGGAGCGTATCTTCAACGTGGGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 72 bp | CTCATTCCCACGTTGAAGATACGCTCCAAGCGAGTCTaGTGCTCCCGAACCTTGTCCTCGGCCTCCGCAGAC | + |
Preference number: 6 (lower is better) Translates to: LIPTLKIRSKRV*CSRTLSSASAD Trigger: GTCTGCGGAGGCCGAGGACAAGGTTCGGGAGCAGCAGACTCGCTTGGAGCGTATCTTCAACGTGGGAATGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 72 bp | GCAAGGCACAGGGTGAAAGGATCCTGTAAGGCTTCCTaGAAACGCTGCGTGCCAGTCACCAAGTTGCCCCCA | + |
Preference number: 6 (lower is better) Translates to: ARHRVKGSCKAS*KRCVPVTKLPP Trigger: TGGGGGCAACTTGGTGACTGGCACGCAGCGTTTCCAGGAAGCCTTACAGGATCCTTTCACCCTGTGCCTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CAA 72 bp | AAGGGCAGCAGGCGCTCTCTGATGATCGCCATCCACTaGTCAGACTCCTCAGCCAGATCCCGGAACTGGTCA | + |
Preference number: 6 (lower is better) Translates to: KGSRRSLMIAIH*SDSSARSRNWS Trigger: TGACCAGTTCCGGGATCTGGCTGAGGAGTCTGACAAGTGGATGGCGATCATCAGAGAGCGCCTGCTGCCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022831.5 |
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CDS TCA 72 bp | TGCCTACGAATTCCCTGCCTTCATTCAAGGGAGCCCTaGCTCCCTGGAACTGAGGACTCAACAGGCCTGAGC | + |
Preference number: 6 (lower is better) Translates to: CLRIPCLHSREP*LPGTEDSTGLS Trigger: GCTCAGGCCTGTTGAGTCCTCAGTTCCAGGGAGTCAGGGCTCCCTTGAATGAAGGCAGGGAATTCGTAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 72 bp | AGGGCACATGCGCACCTGAAGGTTCACCCTGCACACTaGACCCTCCTCTTTGCTGAGGAACCTCCTGTTTCC | + |
Preference number: 6 (lower is better) Translates to: RAHAHLKVHPAH*TLLFAEEPPVS Trigger: GGAAACAGGAGGTTCCTCAGCAAAGAGGAGGGTTCAGTGTGCAGGGTGAACCTTCAGGTGCGCATGTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 72 bp | CTCTTACTGCTGGCGACTTTCCCGACCCTGCCACTCTaGTGCCTACGAATTCCCTGCCTTCATTCAAGGGAG | + |
Preference number: 6 (lower is better) Translates to: LLLLATFPTLPL*CLRIPCLHSRE Trigger: CTCCCTTGAATGAAGGCAGGGAATTCGTAGGCACCAGAGTGGCAGGGTCGGGAAAGTCGCCAGCAGTAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 72 bp | ACGTTCTCCTTGGGGCCCTCAAGCTGCAACCAGATATaGGGATTCTCTGGGCAGTCTTTGGAGAGGACGCTC | + |
Preference number: 6 (lower is better) Translates to: TFSLGPSSCNQI*GFSGQSLERTL Trigger: GAGCGTCCTCTCCAAAGACTGCCCAGAGAATCCTCATATCTGGTTGCAGCTTGAGGGCCCCAAGGAGAACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 72 bp | GGCAGTCAAGGAAGAAACCGTGGGCTCCCAGAAAGATaGAGTGCAGTCTGGGTGGGTAGTGGATCTCACTCT | + |
Preference number: 6 (lower is better) Translates to: GSQGRNRGLPER*SAVWVGSGSHS Trigger: AGAGTGAGATCCACTACCCACCCAGACTGCACTGCATCTTTCTGGGAGCCCACGGTTTCTTCCTTGACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS GCA 72 bp | TTCCTCCTTCTCCACAGTATGACTTTGTCCTCTTACTaGTGGCGACTTTCCCGACCCTGCCACTCTGGTGCC | + |
Preference number: 6 (lower is better) Translates to: FLLLHSMTLSSY*WRLSRPCHSGA Trigger: GGCACCAGAGTGGCAGGGTCGGGAAAGTCGCCAGCAGTAAGAGGACAAAGTCATACTGTGGAGAAGGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 72 bp | GGGGCCCTCAAGCTGCAACCAGATATGAGGATTCTCTaGGCAGTCTTTGGAGAGGACGCTCATTCCCACGTT | + |
Preference number: 6 (lower is better) Translates to: GALKLQPDMRIL*AVFGEDAHSHV Trigger: AACGTGGGAATGAGCGTCCTCTCCAAAGACTGCCCAGAGAATCCTCATATCTGGTTGCAGCTTGAGGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 72 bp | AGAAACCGTGGGCTCCCAGAAAGATGCAGTGCAGTCTaGGTGGGTAGTGGATCTCACTCTGTAGTTCTGGGC | + |
Preference number: 6 (lower is better) Translates to: RNRGLPERCSAV*VGSGSHSVVLG Trigger: GCCCAGAACTACAGAGTGAGATCCACTACCCACCCAGACTGCACTGCATCTTTCTGGGAGCCCACGGTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 72 bp | CTCCTTCTCCACAGTATGACTTTGTCCTCTTACTGCTaGCGACTTTCCCGACCCTGCCACTCTGGTGCCTAC | + |
Preference number: 6 (lower is better) Translates to: LLLHSMTLSSYC*RLSRPCHSGAY Trigger: GTAGGCACCAGAGTGGCAGGGTCGGGAAAGTCGCCAGCAGTAAGAGGACAAAGTCATACTGTGGAGAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 72 bp | CTCTCTCTGACCTTGGAATCTTTACTGAAGCGCCACTaGGGCACAAAGACGGTTATGTCACGGTGGCCACGG | + |
Preference number: 6 (lower is better) Translates to: LSLTLESLLKRH*GTKTVMSRWPR Trigger: CCGTGGCCACCGTGACATAACCGTCTTTGTGCCTCAGTGGCGCTTCAGTAAAGATTCCAAGGTCAGAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 72 bp | CCCAGAAGTACTGTACAGCGAGAGCAATACCCCGACTaGAAAAGTAATGCTGGAGTCCGTGCACCATGGCCA | + |
Preference number: 6 (lower is better) Translates to: PRSTVQREQYPD*KSNAGVRAPWP Trigger: TGGCCATGGTGCACGGACTCCAGCATTACTTTTCCAGTCGGGGTATTGCTCTCGCTGTACAGTACTTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 72 bp | ACCTGTCATCATAAGAAGAAATCCTCTTGCCATCCATaGCTCGTGAGGGTGTCAGGGAAAGCAGACTCAGGG | + |
Preference number: 6 (lower is better) Translates to: TCHHKKKSSCHP*LVRVSGKADSG Trigger: CCCTGAGTCTGCTTTCCCTGACACCCTCACGAGTCATGGATGGCAAGAGGATTTCTTCTTATGATGACAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS CCA 72 bp | ATCCACTTGTCAGACTCCTCAGCCAGATCCCGGAACTaGTCATTGGAGACAATGATCCCATCCGTTTCTTCA | + |
Preference number: 6 (lower is better) Translates to: IHLSDSSARSRN*SLETMIPSVSS Trigger: TGAAGAAACGGATGGGATCATTGTCTCCAATGACCAGTTCCGGGATCTGGCTGAGGAGTCTGACAAGTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |
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CDS TCA 72 bp | ATCATAAGAAGAAATCCTCTTGCCATCCATGACTCGTaGGGGTGTCAGGGAAAGCAGACTCAGGGAATACAA | + |
Preference number: 6 (lower is better) Translates to: IIRRNPLAIHDS*GCQGKQTQGIQ Trigger: TTGTATTCCCTGAGTCTGCTTTCCCTGACACCCTCACGAGTCATGGATGGCAAGAGGATTTCTTCTTATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022831.5 ENSMUST00000228462.2 |