Pregenerated sensors for KHK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029162Ensembl transcript IDs: ENSMUST00000031053.15, ENSMUST00000201571.4, ENSMUST00000201621.4, ENSMUST00000202752.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCACATGGTGCCAGCCTCTaGGGTATCGAGCTGGTGCCG | + |
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Preference number: 2 (lower is better) Translates to: TPAGEWQLDAKLEEVEKAHGASL*GIELVP Trigger: CGGCACCAGCTCGATACCTCAGAGGCTGGCACCATG...TGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CCA 90 bp | GTCCCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAACCACGCTGCCATCTCTaGGACAGGCACCTGCGATCC | + |
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Preference number: 4 (lower is better) Translates to: VPHPTPAGEWQLDAKLEEPRCHL*DRHLRS Trigger: GGATCGCAGGTGCCTGTCCCAGAGATGGCAGCGTGG...TTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR TCA 90 bp | CATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGGGGCCAAAGAGCCCATaGAGGCACAGCGGGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: HPTPAGEWQLDAKLEEVEGPKSP*RHSGLQ Trigger: TTGGAGCCCGCTGTGCCTTCATGGGCTCTTTGGCCC...CTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR TCA 90 bp | CAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGGTGCCATCTGAGTGGAGCAGCTaGCCATCGGGGCCCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: QLDAKLEEVEKAVAGMVPSEWSS*PSGPRA Trigger: TGCCCTGGGCCCCGATGGTCAGCTGCTCCACTCAGA...TGGCACCATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | GAAGTAGAGAAGGCAGTGGCAGGCATGGTGCCAGCCTCTGAGGTATCGAGCTGGGCGTTGCCTCCACGCTaGCATCTCTGGGACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EVEKAVAGMVPASEVSSWALPPR*HLWDRH Trigger: GTGCCTGTCCCAGAGATGGCAGCGTGGAGGCAACGC...CCAGCTCGATACCTCAGAGGCTGGCACCATGCCTGCCACTGCCTTCTCTACTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CCA 90 bp | TCCCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTTCTTGCCAGCCACCTaGCACCCGAATCTCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHIPHLPGNGSWMLSWRKFLPAT*HPNLRA Trigger: GGCCCTGAGATTCGGGTGCCAGGTGGCTGGCAAGAA...CTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR TCA 90 bp | CAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGGTGCCACAGGGCCTCCACTGCTaGCTGGAACCCCAGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLDAKLEEVEKAVAGMVPQGLHC*LEPQVL Trigger: AAGCACCTGGGGTTCCAGTCAGCAGTGGAGGCCCTG...TGGCACCATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR TCA 90 bp | TGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGGTGCAGGGCCTCCACTGCTaGCTGGAACCCCAGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WQLDAKLEEVEKAVAGMVQGLHC*LEPQVL Trigger: AAGCACCTGGGGTTCCAGTCAGCAGTGGAGGCCCTG...CACCATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR TCA 90 bp | CCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGCGGTGGGAAGGCATCTaGGTGGAGCAGCTGACCATC | + |
|
Preference number: 4 (lower is better) Translates to: PAGEWQLDAKLEEVEKAVRWEGI*VEQLTI Trigger: GATGGTCAGCTGCTCCACTCAGATGCCTTCCCACCG...CACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | GAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGAGGCGTGCAGAATGGTaGGGCTGCCGCTGGCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: EWQLDAKLEEVEKAVAGMRRAEW*GCRWPR Trigger: ACGAGGCCAGCGGCAGCCGCACCATTCTGCACGCCT...CATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031053.15 |
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| CDS-3UTR GCA 90 bp | CCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAACATCCACGCCCCTCTaGCTGAAGTCAGCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHPTPAGEWQLDAKLEEVTSTPL*LKSATR Trigger: CCTGGTGGCTGACTTCAGGCAGAGGGGCGTGGATGT...TACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR TCA 90 bp | GAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGGGGCCAAAGAGCCCATaGAGGCACAGCGGGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EWQLDAKLEEVEKAVAGMGPKSP*RHSGLQ Trigger: TTGGAGCCCGCTGTGCCTTCATGGGCTCTTTGGCCC...CATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | GTCCCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAAGGAGTTGGATGCGTTaGCTCCACGCTGCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPAGEWQLDAKLEERSWMR*LHAAIS Trigger: AGAGATGGCAGCGTGGAGGCAACGCATCCAACTCCT...TTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | CCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGAGTGCAGGAGTTGGATaGGTTGCCTCCACGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PAGEWQLDAKLEEVEKAVSAGVG*VASTLP Trigger: TGGCAGCGTGGAGGCAACGCATCCAACTCCTGCACT...CACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | TGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGGTGACATCCACGCCCCTCTaGCTGAAGTCAGCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WQLDAKLEEVEKAVAGMVTSTPL*LKSATR Trigger: CCTGGTGGCTGACTTCAGGCAGAGGGGCGTGGATGT...CACCATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | GTCCCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAATCAGGGCCTCTTGCATaGTGTTTCCCTTCGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPAGEWQLDAKLEESGPLA*CFPSRG Trigger: GCCTCTCGAAGGGAAACAGCATGCAAGAGGCCCTGA...TTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CCA 90 bp | GGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCGGACAGTGCAGGAGTTaGATGCGTTGCCTCCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GEWQLDAKLEEVEKAVAGGQCRS*MRCLHA Trigger: AGCGTGGAGGCAACGCATCCAACTCCTGCACTGTCC...GCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CCA 90 bp | TCCCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGGTGGCAGAGGCTGCTTaGCATTGTGCTCCTCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: SHIPHLPGNGSWMLSWRKVAEAA*HCAPLS Trigger: GGATAGAGGAGCACAATGCCAAGCAGCCTCTGCCAC...CTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CCA 90 bp | GAAGTAGAGAAGGCAGTGGCAGGCATGGTGCCAGCCTCTGAGGTATCGAGCTGGCACCCGGACCTTCTGTaGCAGAGGCTGCTTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: EVEKAVAGMVPASEVSSWHPDLL*QRLLGI Trigger: AATGCCAAGCAGCCTCTGCCACAGAAGGTCCGGGTG...CCAGCTCGATACCTCAGAGGCTGGCACCATGCCTGCCACTGCCTTCTCTACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | GTCCCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAATGCTCCTCTATCCGCTaGAGCATCTTCACCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPHPTPAGEWQLDAKLEECSSIR*SIFTCS Trigger: GGAACAGGTGAAGATGCTGCAGCGGATAGAGGAGCA...TTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | GAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGGCAAGCCACACTTCTTaGCAGCCACCTGGCACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EWQLDAKLEEVEKAVAGMASHTS*QPPGTR Trigger: TCGGGTGCCAGGTGGCTGGCAAGAAGTGTGGCTTGC...CATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CCA 90 bp | GAAGTAGAGAAGGCAGTGGCAGGCATGGTGCCAGCCTCTGAGGTATCGAGCTGGTTCCGGCCCTCAATGTaGATCCACTTGAACCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EVEKAVAGMVPASEVSSWFRPSM*IHLNRV Trigger: GACCCGGTTCAAGTGGATCCACATTGAGGGCCGGAA...CCAGCTCGATACCTCAGAGGCTGGCACCATGCCTGCCACTGCCTTCTCTACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CCA 90 bp | CCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTATTCCGGCCCTCAATGTaGATCCACTTGAACCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: PHPTPAGEWQLDAKLEEVFRPSM*IHLNRV Trigger: GACCCGGTTCAAGTGGATCCACATTGAGGGCCGGAA...TACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CCA 90 bp | CATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGGTGGCAGAGGCTGCTTaGCATTGTGCTCCTCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: HPTPAGEWQLDAKLEEVEVAEAA*HCAPLS Trigger: GGATAGAGGAGCACAATGCCAAGCAGCCTCTGCCAC...CTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | CAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGGTGCCAAGGAGTTGGATGCGTTaGCTCCACGCTGCCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: QLDAKLEEVEKAVAGMVPRSWMR*LHAAIS Trigger: AGAGATGGCAGCGTGGAGGCAACGCATCCAACTCCT...TGGCACCATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | CCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTATGCTCCTCTATCCGCTaGAGCATCTTCACCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PHPTPAGEWQLDAKLEEVCSSIR*SIFTCS Trigger: GGAACAGGTGAAGATGCTGCAGCGGATAGAGGAGCA...TACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | GGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCTTCTGTGGCAGAGGCTaGTTGGCATTGTGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GEWQLDAKLEEVEKAVAGFCGRG*LALCSS Trigger: AGAGGAGCACAATGCCAAGCAGCCTCTGCCACAGAA...GCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CCA 90 bp | GTCCCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAAAGTCCACAGAATGTTaGCGGAGGTCATCCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: VPHPTPAGEWQLDAKLEEKSTEC*RRSSRT Trigger: TGTCCTGGATGACCTCCGCCAACATTCTGTGGACTT...TTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031053.15 |
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| CDS-3UTR TCA 90 bp | CAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGGTGCCACAATGTGGATCCACTTaGACCGGGTCAGATCGACCT | + |
|
Preference number: 4 (lower is better) Translates to: QLDAKLEEVEKAVAGMVPQCGST*TGSDRP Trigger: AGGTCGATCTGACCCGGTTCAAGTGGATCCACATTG...TGGCACCATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR TCA 90 bp | CCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGTGGCCACATCTTTGCTaGCAAACACCACCTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: PAGEWQLDAKLEEVEKAVWPHLC*QTPPHH Trigger: ATGGTGAGGTGGTGTTTGTCAGCAAAGATGTGGCCA...CACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | TCCAGGTATCTGCAGAGAGGAGATAGGTATACAGAGACGCAGACACAGACAGAGGCGTTGCCTCCACGCTaGCATCTCTGGGACAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: SRYLQRGDRYTETQTQTEALPPR*HLWDRH Trigger: GTGCCTGTCCCAGAGATGGCAGCGTGGAGGCAACGC...CTCTGTCTGTGTCTGCGTCTCTGTATACCTATCTCCTCTCTGCAGATACCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | CATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAATCTCAGGGCCTCTTaGATGCTGTTTCCCTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HPTPAGEWQLDAKLEEVENLRAS*MLFPFE Trigger: CTCGAAGGGAAACAGCATGCAAGAGGCCCTGAGATT...CTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | CCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGATGCCATCAAACCCCTaGAAGCCACACTTCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PAGEWQLDAKLEEVEKAVMPSNP*KPHFLP Trigger: TGGCAAGAAGTGTGGCTTGCAGGGGTTTGATGGCAT...CACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR TCA 90 bp | ACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAAGCCATTGGAGTTGTTaGCGATGCAGCAAGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: TPAGEWQLDAKLEEVEKASHWSC*RCSKSK Trigger: CTTGCTCTTGCTGCATCGTCAACAACTCCAATGGCT...TGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR TCA 90 bp | GAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGCAATGTGGATCCACTTaGACCGGGTCAGATCGACCT | + |
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Preference number: 4 (lower is better) Translates to: EWQLDAKLEEVEKAVAGMQCGST*TGSDRP Trigger: AGGTCGATCTGACCCGGTTCAAGTGGATCCACATTG...CATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR TCA 90 bp | TCCAGGTATCTGCAGAGAGGAGATAGGTATACAGAGACGCAGACACAGACAGAGCGGTGGGAAGGCATCTaGGTGGAGCAGCTGACCATC | + |
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Preference number: 4 (lower is better) Translates to: SRYLQRGDRYTETQTQTERWEGI*VEQLTI Trigger: GATGGTCAGCTGCTCCACTCAGATGCCTTCCCACCG...CTCTGTCTGTGTCTGCGTCTCTGTATACCTATCTCCTCTCTGCAGATACCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS-3UTR CCA 90 bp | TGGCTCAGGGGAAGATTTATTTGCTCCAGGTATCTGCAGAGAGGAGATAGGTATCCACGCTGCCATCTCTaGGACAGGCACCTGCGATCC | + |
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Preference number: 4 (lower is better) Translates to: WLRGRFICSRYLQRGDRYPRCHL*DRHLRS Trigger: GGATCGCAGGTGCCTGTCCCAGAGATGGCAGCGTGG...ATACCTATCTCCTCTCTGCAGATACCTGGAGCAAATAAATCTTCCCCTGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS-3UTR TCA 90 bp | GCTCCAGGTATCTGCAGAGAGGAGATAGGTATACAGAGACGCAGACACAGACAGTGGCCACATCTTTGCTaGCAAACACCACCTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: APGICREEIGIQRRRHRQWPHLC*QTPPHH Trigger: ATGGTGAGGTGGTGTTTGTCAGCAAAGATGTGGCCA...CTGTCTGTGTCTGCGTCTCTGTATACCTATCTCCTCTCTGCAGATACCTGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | TTTATTTGCTCCAGGTATCTGCAGAGAGGAGATAGGTATACAGAGACGCAGACAGCAAGCCACACTTCTTaGCAGCCACCTGGCACCCGA | + |
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Preference number: 4 (lower is better) Translates to: FICSRYLQRGDRYTETQTASHTS*QPPGTR Trigger: TCGGGTGCCAGGTGGCTGGCAAGAAGTGTGGCTTGC...TGTCTGCGTCTCTGTATACCTATCTCCTCTCTGCAGATACCTGGAGCAAATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS-3UTR CCA 90 bp | TTATTTGCTCCAGGTATCTGCAGAGAGGAGATAGGTATACAGAGACGCAGACACGGACAGTGCAGGAGTTaGATGCGTTGCCTCCACGCT | + |
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Preference number: 4 (lower is better) Translates to: LFAPGICREEIGIQRRRHGQCRS*MRCLHA Trigger: AGCGTGGAGGCAACGCATCCAACTCCTGCACTGTCC...GTGTCTGCGTCTCTGTATACCTATCTCCTCTCTGCAGATACCTGGAGCAAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS-3UTR CCA 90 bp | AGATTTATTTGCTCCAGGTATCTGCAGAGAGGAGATAGGTATACAGAGACGCAGTTCTTGCCAGCCACCTaGCACCCGAATCTCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RFICSRYLQRGDRYTETQFLPAT*HPNLRA Trigger: GGCCCTGAGATTCGGGTGCCAGGTGGCTGGCAAGAA...CTGCGTCTCTGTATACCTATCTCCTCTCTGCAGATACCTGGAGCAAATAAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | TTATTTGCTCCAGGTATCTGCAGAGAGGAGATAGGTATACAGAGACGCAGACACTCAGGGCCTCTTGCATaGTGTTTCCCTTCGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFAPGICREEIGIQRRRHSGPLA*CFPSRG Trigger: GCCTCTCGAAGGGAAACAGCATGCAAGAGGCCCTGA...GTGTCTGCGTCTCTGTATACCTATCTCCTCTCTGCAGATACCTGGAGCAAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | TCCAGGTATCTGCAGAGAGGAGATAGGTATACAGAGACGCAGACACAGACAGAGAATCTCAGGGCCTCTTaGATGCTGTTTCCCTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: SRYLQRGDRYTETQTQTENLRAS*MLFPFE Trigger: CTCGAAGGGAAACAGCATGCAAGAGGCCCTGAGATT...CTCTGTCTGTGTCTGCGTCTCTGTATACCTATCTCCTCTCTGCAGATACCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS-3UTR CCA 90 bp | AGATTTATTTGCTCCAGGTATCTGCAGAGAGGAGATAGGTATACAGAGACGCAGCACCCGGACCTTCTGTaGCAGAGGCTGCTTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: RFICSRYLQRGDRYTETQHPDLL*QRLLGI Trigger: AATGCCAAGCAGCCTCTGCCACAGAAGGTCCGGGTG...CTGCGTCTCTGTATACCTATCTCCTCTCTGCAGATACCTGGAGCAAATAAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | TTTATTTGCTCCAGGTATCTGCAGAGAGGAGATAGGTATACAGAGACGCAGACATTCTGTGGCAGAGGCTaGTTGGCATTGTGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FICSRYLQRGDRYTETQTFCGRG*LALCSS Trigger: AGAGGAGCACAATGCCAAGCAGCCTCTGCCACAGAA...TGTCTGCGTCTCTGTATACCTATCTCCTCTCTGCAGATACCTGGAGCAAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS-3UTR GCA 90 bp | TTTATTTGCTCCAGGTATCTGCAGAGAGGAGATAGGTATACAGAGACGCAGACAATGCCATCAAACCCCTaGAAGCCACACTTCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FICSRYLQRGDRYTETQTMPSNP*KPHFLP Trigger: TGGCAAGAAGTGTGGCTTGCAGGGGTTTGATGGCAT...TGTCTGCGTCTCTGTATACCTATCTCCTCTCTGCAGATACCTGGAGCAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS TCA 90 bp | CCTGGCTCTGCCAAGTCACTTGAGACACATCCACGCCCCTCTGCCTaGAGTCAGCCACCAGGAAGTCGGCAACGTGGCCAGGGGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGSAKSLETHPRPSA*SQPPGSRQRGQGPK Trigger: CTTTGGCCCCTGGCCACGTTGCCGACTTCCTGGTGGCTGACTTCAGGCAGAGGGGCGTGGATGTGTCTCAAGTGACTTGGCAGAGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS GCA 90 bp | GGCACAGCGGGCTCCAAGCAAGGAAAGGACAGTGCAGGAGTTGGATaGGTTGCCTCCACGCTGCCATCTCTGGGACAGGCACCTGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: GTAGSKQGKDSAGVG*VASTLPSLGQAPAI Trigger: GATCGCAGGTGCCTGTCCCAGAGATGGCAGCGTGGAGGCAACGCATCCAACTCCTGCACTGTCCTTTCCTTGCTTGGAGCCCGCTGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS-3UTR CAA 90 bp | TCCCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTGCAAGCCACACTTCTaGCCAGCCACCTGGCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: SHIPHLPGNGSWMLSWRKCKPHF*PATWHP Trigger: CGGGTGCCAGGTGGCTGGCAAGAAGTGTGGCTTGCA...CTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS GCA 90 bp | AGCGGGCTCCAAGCAAGGAAAGGACAGTGCAGGAGTTGGATGCGTTaGCTCCACGCTGCCATCTCTGGGACAGGCACCTGCGATCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SGLQARKGQCRSWMR*LHAAISGTGTCDPC Trigger: ACACGGATCGCAGGTGCCTGTCCCAGAGATGGCAGCGTGGAGGCAACGCATCCAACTCCTGCACTGTCCTTTCCTTGCTTGGAGCCCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS-3UTR CAA 90 bp | GTCCCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAACAGGAGTTGGATGCGTaGCCTCCACGCTGCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VPHPTPAGEWQLDAKLEEQELDA*PPRCHL Trigger: GAGATGGCAGCGTGGAGGCAACGCATCCAACTCCTG...TTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | GGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCTGCAAGCCACACTTCTaGCCAGCCACCTGGCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: GEWQLDAKLEEVEKAVAGCKPHF*PATWHP Trigger: CGGGTGCCAGGTGGCTGGCAAGAAGTGTGGCTTGCA...GCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS GCA 90 bp | AGCAAGGAAAGGACAGTGCAGGAGTTGGATGCGTTGCCTCCACGCTaGCATCTCTGGGACAGGCACCTGCGATCCGTGTCTTCCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SKERTVQELDALPPR*HLWDRHLRSVSSSG Trigger: CCCAGAGGAAGACACGGATCGCAGGTGCCTGTCCCAGAGATGGCAGCGTGGAGGCAACGCATCCAACTCCTGCACTGTCCTTTCCTTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS CCA 90 bp | CTCCTCACGGGGCTTCTCTATCTCCACCGACACCCGGACCTTCTGTaGCAGAGGCTGCTTGGCATTGTGCTCCTCTATCCGCTGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLTGLLYLHRHPDLL*QRLLGIVLLYPLQH Trigger: ATGCTGCAGCGGATAGAGGAGCACAATGCCAAGCAGCCTCTGCCACAGAAGGTCCGGGTGTCGGTGGAGATAGAGAAGCCCCGTGAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS-3UTR CAA 90 bp | GGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCAGGACAGTGCAGGAGTaGGATGCGTTGCCTCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: GEWQLDAKLEEVEKAVAGRTVQE*DALPPR Trigger: GCGTGGAGGCAACGCATCCAACTCCTGCACTGTCCT...GCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | TCCCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGAGAGGCTGCTTGGCATaGTGCTCCTCTATCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SHIPHLPGNGSWMLSWRKRGCLA*CSSIRC Trigger: GCAGCGGATAGAGGAGCACAATGCCAAGCAGCCTCT...CTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS CCA 90 bp | AGGACAGTGCAGGAGTTGGATGCGTTGCCTCCACGCTGCCATCTCTaGGACAGGCACCTGCGATCCGTGTCTTCCTCTGGGTATTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RTVQELDALPPRCHL*DRHLRSVSSSGYLS Trigger: GGACAAATACCCAGAGGAAGACACGGATCGCAGGTGCCTGTCCCAGAGATGGCAGCGTGGAGGCAACGCATCCAACTCCTGCACTGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS CCA 90 bp | GAACCGGGTCAGATCGACCTTCTCAAAGTCCTTAGCAGACACATCTaGCAGGTTCCTGTAGGCGTGCAGAATGGTGCGGCTGCCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EPGQIDLLKVLSRHI*QVPVGVQNGAAAAG Trigger: GCCAGCGGCAGCCGCACCATTCTGCACGCCTACAGGAACCTGCCAGATGTGTCTGCTAAGGACTTTGAGAAGGTCGATCTGACCCGGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202752.2 |
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| CDS-3UTR CAA 90 bp | TGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGGTGCAGGAGTTGGATGCGTaGCCTCCACGCTGCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: WQLDAKLEEVEKAVAGMVQELDA*PPRCHL Trigger: GAGATGGCAGCGTGGAGGCAACGCATCCAACTCCTG...CACCATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | CCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGAGAGGCTGCTTGGCATaGTGCTCCTCTATCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PAGEWQLDAKLEEVEKAVRGCLA*CSSIRC Trigger: GCAGCGGATAGAGGAGCACAATGCCAAGCAGCCTCT...CACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS TCA 90 bp | ATGCAGCAAGAGCAAGGGGTATCTCCCTGGCTCTGCCAAGTCACTTaGGACACATCCACGCCCCTCTGCCTGAAGTCAGCCACCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: MQQEQGVSPWLCQVT*DTSTPLCLKSATRK Trigger: CTTCCTGGTGGCTGACTTCAGGCAGAGGGGCGTGGATGTGTCTCAAGTGACTTGGCAGAGCCAGGGAGATACCCCTTGCTCTTGCTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | GTCCCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAATCAATGTGGATCCACTaGAACCGGGTCAGATCGACC | + |
|
Preference number: 5 (lower is better) Translates to: VPHPTPAGEWQLDAKLEESMWIH*NRVRST Trigger: GGTCGATCTGACCCGGTTCAAGTGGATCCACATTGA...TTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | GGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCTGTGGCAGAGGCTGCTaGGCATTGTGCTCCTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: GEWQLDAKLEEVEKAVAGCGRGC*ALCSSI Trigger: GATAGAGGAGCACAATGCCAAGCAGCCTCTGCCACA...GCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | CCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGTGGAACCCCAGGTGCTaGGCCACATCTTTGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: PAGEWQLDAKLEEVEKAVWNPRC*ATSLLT Trigger: TGTCAGCAAAGATGTGGCCAAGCACCTGGGGTTCCA...CACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | GAAGTAGAGAAGGCAGTGGCAGGCATGGTGCCAGCCTCTGAGGTATCGAGCTGGTGGAACCCCAGGTGCTaGGCCACATCTTTGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: EVEKAVAGMVPASEVSSWWNPRC*ATSLLT Trigger: TGTCAGCAAAGATGTGGCCAAGCACCTGGGGTTCCA...CCAGCTCGATACCTCAGAGGCTGGCACCATGCCTGCCACTGCCTTCTCTACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | TCCCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGAAGATGACAGAGGCATaGAAGGTGTCTCCAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHIPHLPGNGSWMLSWRKKMTEA*KVSPAP Trigger: TGGGGCTGGAGACACCTTCAATGCCTCTGTCATCTT...CTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS TCA 90 bp | CCCTTTCTTCACTCGACTGTACAAGCCCCTCAGGGCCTCCACTGCTaGCTGGAACCCCAGGTGCTTGGCCACATCTTTGCTGACAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: PFLHSTVQAPQGLHC*LEPQVLGHIFADKH Trigger: GTGTTTGTCAGCAAAGATGTGGCCAAGCACCTGGGGTTCCAGTCAGCAGTGGAGGCCCTGAGGGGCTTGTACAGTCGAGTGAAGAAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS GCA 90 bp | ACCTTCTGTGGCAGAGGCTGCTTGGCATTGTGCTCCTCTATCCGCTaGAGCATCTTCACCTGTTCCGATGCATTCCGGCCCTCAATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TFCGRGCLALCSSIR*SIFTCSDAFRPSMW Trigger: CCACATTGAGGGCCGGAATGCATCGGAACAGGTGAAGATGCTGCAGCGGATAGAGGAGCACAATGCCAAGCAGCCTCTGCCACAGAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS CCA 90 bp | ACAATGCCATCAAACCCCTGCAAGCCACACTTCTTGCCAGCCACCTaGCACCCGAATCTCAGGGCCTCTTGCATGCTGTTTCCCTTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: TMPSNPCKPHFLPAT*HPNLRASCMLFPFE Trigger: CTCGAAGGGAAACAGCATGCAAGAGGCCCTGAGATTCGGGTGCCAGGTGGCTGGCAAGAAGTGTGGCTTGCAGGGGTTTGATGGCATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | GTCCCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGAGCCATTGGAGTTGTaGACGATGCAGCAAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VPHPTPAGEWQLDAKLEEEPLEL*TMQQEQ Trigger: TTGCTCTTGCTGCATCGTCAACAACTCCAATGGCTC...TTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | CAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGGTGCCACGGGAGCCATTGGAGTaGTTGACGATGCAGCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLDAKLEEVEKAVAGMVPREPLE*LTMQQE Trigger: CTCTTGCTGCATCGTCAACAACTCCAATGGCTCCCG...TGGCACCATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | CATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGATGGTACGGGAGCCATaGGAGTTGTTGACGATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HPTPAGEWQLDAKLEEVEMVREP*ELLTMQ Trigger: CTGCATCGTCAACAACTCCAATGGCTCCCGTACCAT...CTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | GTCCCACATCCCACACCTGCCGGGGAATGGCAGCTGGATGCTAAGCTGGAGGAATATTTGTCCACCACATaGATGATGTCCAGCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: VPHPTPAGEWQLDAKLEEYLSTT*MMSSTT Trigger: GGTGGTGCTGGACATCATCAATGTGGTGGACAAATA...TTCCTCCAGCTTAGCATCCAGCTGCCATTCCCCGGCAGGTGTGGGATGTGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | GAAGTAGAGAAGGCAGTGGCAGGCATGGTGCCAGCCTCTGAGGTATCGAGCTGGGAGCCATTGGAGTTGTaGACGATGCAGCAAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: EVEKAVAGMVPASEVSSWEPLEL*TMQQEQ Trigger: TTGCTCTTGCTGCATCGTCAACAACTCCAATGGCTC...CCAGCTCGATACCTCAGAGGCTGGCACCATGCCTGCCACTGCCTTCTCTACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | CAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGGTGCCAATGGTACGGGAGCCATaGGAGTTGTTGACGATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLDAKLEEVEKAVAGMVPMVREP*ELLTMQ Trigger: CTGCATCGTCAACAACTCCAATGGCTCCCGTACCAT...TGGCACCATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | GAATGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGTGTGGCAGAGGCTGCTaGGCATTGTGCTCCTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: EWQLDAKLEEVEKAVAGMCGRGC*ALCSSI Trigger: GATAGAGGAGCACAATGCCAAGCAGCCTCTGCCACA...CATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCATTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | CAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGGTGCCAAAGATGACAGAGGCATaGAAGGTGTCTCCAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLDAKLEEVEKAVAGMVPKMTEA*KVSPAP Trigger: TGGGGCTGGAGACACCTTCAATGCCTCTGTCATCTT...TGGCACCATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | CAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGGTGCCATGCTTGGCCACATCTTaGCTGACAAACACCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QLDAKLEEVEKAVAGMVPCLATS*LTNTTS Trigger: TGAGGTGGTGTTTGTCAGCAAAGATGTGGCCAAGCA...TGGCACCATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | TGGCAGCTGGATGCTAAGCTGGAGGAAGTAGAGAAGGCAGTGGCAGGCATGGTGTGCTTGGCCACATCTTaGCTGACAAACACCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WQLDAKLEEVEKAVAGMVCLATS*LTNTTS Trigger: TGAGGTGGTGTTTGTCAGCAAAGATGTGGCCAAGCA...CACCATGCCTGCCACTGCCTTCTCTACTTCCTCCAGCTTAGCATCCAGCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS TCA 90 bp | GCCTCGTTGATGATGACTGTAGAAGTGGGGATGGAGCCCTCGGTCTaGAGGACCACATATCGTAAGTCCACAGAATGTTGGCGGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASLMMTVEVGMEPSV*RTTYRKSTECWRRS Trigger: TGACCTCCGCCAACATTCTGTGGACTTACGATATGTGGTCCTTCAGACCGAGGGCTCCATCCCCACTTCTACAGTCATCATCAACGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000202752.2 |
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| CDS-3UTR CAA 90 bp | GCTCCAGGTATCTGCAGAGAGGAGATAGGTATACAGAGACGCAGACACAGACAGCGGGAGCCATTGGAGTaGTTGACGATGCAGCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: APGICREEIGIQRRRHRQREPLE*LTMQQE Trigger: CTCTTGCTGCATCGTCAACAACTCCAATGGCTCCCG...CTGTCTGTGTCTGCGTCTCTGTATACCTATCTCCTCTCTGCAGATACCTGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS CCA 90 bp | GAACCGGGTCAGATCGACCTTCTCAAAGTCCTTAGCAGACACATCTaGCAGGTTCGTGTCGTAGAGTATAATGGTACGGGAGCCATTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EPGQIDLLKVLSRHI*QVRVVEYNGTGAIG Trigger: TCCAATGGCTCCCGTACCATTATACTCTACGACACGAACCTGCCAGATGTGTCTGCTAAGGACTTTGAGAAGGTCGATCTGACCCGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | TTATTTGCTCCAGGTATCTGCAGAGAGGAGATAGGTATACAGAGACGCAGACACTCAATGTGGATCCACTaGAACCGGGTCAGATCGACC | + |
|
Preference number: 5 (lower is better) Translates to: LFAPGICREEIGIQRRRHSMWIH*NRVRST Trigger: GGTCGATCTGACCCGGTTCAAGTGGATCCACATTGA...GTGTCTGCGTCTCTGTATACCTATCTCCTCTCTGCAGATACCTGGAGCAAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS-3UTR CAA 90 bp | TGGCTCAGGGGAAGATTTATTTGCTCCAGGTATCTGCAGAGAGGAGATAGGTATTATTTGTCCACCACATaGATGATGTCCAGCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: WLRGRFICSRYLQRGDRYYLSTT*MMSSTT Trigger: GGTGGTGCTGGACATCATCAATGTGGTGGACAAATA...ATACCTATCTCCTCTCTGCAGATACCTGGAGCAAATAAATCTTCCCCTGAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS CCA 72 bp | CTCTGCCTGAAGTCAGCCACCAGGAAGTCGGCAACGTaGCCAGGGGCCAAAGAGCCCATGAAGGCACAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LCLKSATRKSAT*PGAKEPMKAQR Trigger: CCGCTGTGCCTTCATGGGCTCTTTGGCCCCTGGCCACGTTGCCGACTTCCTGGTGGCTGACTTCAGGCAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
||
| CDS CAA 90 bp | CAGCGGGCTCCAAGCAAGGAAAGGACAGTGCAGGAGTTGGATGCGTaGCCTCCACGCTGCCATCTCTGGGACAGGCACCTGCGATCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: QRAPSKERTVQELDA*PPRCHLWDRHLRSV Trigger: CACGGATCGCAGGTGCCTGTCCCAGAGATGGCAGCGTGGAGGCAACGCATCCAACTCCTGCACTGTCCTTTCCTTGCTTGGAGCCCGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS TCA 72 bp | GGAAGTCGGCAACGTGGCCAGGGGCCAAAGAGCCCATaGAGGCACAGCGGGCTCCAAGCAAGGAAAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: GSRQRGQGPKSP*RHSGLQARKGQ Trigger: CTGTCCTTTCCTTGCTTGGAGCCCGCTGTGCCTTCATGGGCTCTTTGGCCCCTGGCCACGTTGCCGACTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS TCA 72 bp | GGTTCTCGGCAACGTGGCCAGGGGCCAAAGAGCCCATaGAGGCACAGCGGGCTCCAAGCAAGGAAAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: GSRQRGQGPKSP*RHSGLQARKGQ Trigger: CTGTCCTTTCCTTGCTTGGAGCCCGCTGTGCCTTCATGGGCTCTTTGGCCCCTGGCCACGTTGCCGAGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201571.4 |
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| CDS CCA 72 bp | CAGGAGTTGGATGCGTTGCCTCCACGCTGCCATCTCTaGGACAGGCACCTGCGATCCGTGTCTTCCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: QELDALPPRCHL*DRHLRSVSSSG Trigger: CCCAGAGGAAGACACGGATCGCAGGTGCCTGTCCCAGAGATGGCAGCGTGGAGGCAACGCATCCAACTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS TCA 72 bp | GCCAAGTCACTTGAGACACATCCACGCCCCTCTGCCTaGAGTCAGCCACCAGGAAGTCGGCAACGTGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: AKSLETHPRPSA*SQPPGSRQRGQ Trigger: CTGGCCACGTTGCCGACTTCCTGGTGGCTGACTTCAGGCAGAGGGGCGTGGATGTGTCTCAAGTGACTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201621.4 |
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| CDS GCA 72 bp | AGGACAGTGCAGGAGTTGGATGCGTTGCCTCCACGCTaGCATCTCTGGGACAGGCACCTGCGATCCGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RTVQELDALPPR*HLWDRHLRSVS Trigger: AGACACGGATCGCAGGTGCCTGTCCCAGAGATGGCAGCGTGGAGGCAACGCATCCAACTCCTGCACTGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS CCA 72 bp | TGTTGGCGGAGGTCATCCAGGACAAAATCGGCAACGTaGCCAGGGGCCAAAGAGCCCATGAAGGCACAGCGG | + |
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Preference number: 6 (lower is better) Translates to: CWRRSSRTKSAT*PGAKEPMKAQR Trigger: CCGCTGTGCCTTCATGGGCTCTTTGGCCCCTGGCCACGTTGCCGATTTTGTCCTGGATGACCTCCGCCAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000202752.2 |
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| CDS CCA 72 bp | TCCTTAGCAGACACATCTGGCAGGTTCTCGGCAACGTaGCCAGGGGCCAAAGAGCCCATGAAGGCACAGCGG | + |
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Preference number: 6 (lower is better) Translates to: SLADTSGRFSAT*PGAKEPMKAQR Trigger: CCGCTGTGCCTTCATGGGCTCTTTGGCCCCTGGCCACGTTGCCGAGAACCTGCCAGATGTGTCTGCTAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201571.4 |
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| CDS TCA 72 bp | CAAAATCGGCAACGTGGCCAGGGGCCAAAGAGCCCATaGAGGCACAGCGGGCTCCAAGCAAGGAAAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: QNRQRGQGPKSP*RHSGLQARKGQ Trigger: CTGTCCTTTCCTTGCTTGGAGCCCGCTGTGCCTTCATGGGCTCTTTGGCCCCTGGCCACGTTGCCGATTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000202752.2 |
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| CDS TCA 72 bp | GAGCAAGGGGTATCTCCCTGGCTCTGCCAAGTCACTTaGGACACATCCACGCCCCTCTGCCTGAAGTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: EQGVSPWLCQVT*DTSTPLCLKSA Trigger: GGCTGACTTCAGGCAGAGGGGCGTGGATGTGTCTCAAGTGACTTGGCAGAGCCAGGGAGATACCCCTTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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| CDS TCA 72 bp | CACTCGACTGTACAAGCCCCTCAGGGCCTCCACTGCTaGCTGGAACCCCAGGTGCTTGGCCACATCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: HSTVQAPQGLHC*LEPQVLGHIFA Trigger: AGCAAAGATGTGGCCAAGCACCTGGGGTTCCAGTCAGCAGTGGAGGCCCTGAGGGGCTTGTACAGTCGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS GCA 72 bp | CGTTGCCTCCACGCTGCCATCTCTGGGACAGGCACCTaGGATCCGTGTCTTCCTCTGGGTATTTGTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: RCLHAAISGTGT*DPCLPLGICPP Trigger: TGGTGGACAAATACCCAGAGGAAGACACGGATCGCAGGTGCCTGTCCCAGAGATGGCAGCGTGGAGGCAACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS GCA 72 bp | CAAGCAAGGAAAGGACAGTGCAGGAGTTGGATGCGTTaGCTCCACGCTGCCATCTCTGGGACAGGCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: QARKGQCRSWMR*LHAAISGTGTC Trigger: GCAGGTGCCTGTCCCAGAGATGGCAGCGTGGAGGCAACGCATCCAACTCCTGCACTGTCCTTTCCTTGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS GCA 72 bp | GGCAGAGGCTGCTTGGCATTGTGCTCCTCTATCCGCTaGAGCATCTTCACCTGTTCCGATGCATTCCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GRGCLALCSSIR*SIFTCSDAFRP Trigger: GGGCCGGAATGCATCGGAACAGGTGAAGATGCTGCAGCGGATAGAGGAGCACAATGCCAAGCAGCCTCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS GCA 72 bp | ATCTCCACCGACACCCGGACCTTCTGTGGCAGAGGCTaGTTGGCATTGTGCTCCTCTATCCGCTGCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: ISTDTRTFCGRG*LALCSSIRCSI Trigger: GATGCTGCAGCGGATAGAGGAGCACAATGCCAAGCAGCCTCTGCCACAGAAGGTCCGGGTGTCGGTGGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS GCA 72 bp | CCCCTCAGGGCCTCCACTGCTGACTGGAACCCCAGGTaGTTGGCCACATCTTTGCTGACAAACACCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: PLRASTADWNPR*LATSLLTNTTS Trigger: TGAGGTGGTGTTTGTCAGCAAAGATGTGGCCAAGCACCTGGGGTTCCAGTCAGCAGTGGAGGCCCTGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS CCA 72 bp | AGCGGGCTCCAAGCAAGGAAAGGACAGTGCAGGAGTTaGATGCGTTGCCTCCACGCTGCCATCTCTGGGACA | + |
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Preference number: 6 (lower is better) Translates to: SGLQARKGQCRS*MRCLHAAISGT Trigger: TGTCCCAGAGATGGCAGCGTGGAGGCAACGCATCCAACTCCTGCACTGTCCTTTCCTTGCTTGGAGCCCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS CCA 72 bp | CCACCGACACCCGGACCTTCTGTGGCAGAGGCTGCTTaGCATTGTGCTCCTCTATCCGCTGCAGCATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PPTPGPSVAEAA*HCAPLSAAASS Trigger: TGAAGATGCTGCAGCGGATAGAGGAGCACAATGCCAAGCAGCCTCTGCCACAGAAGGTCCGGGTGTCGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS CCA 72 bp | GGGCTTCTCTATCTCCACCGACACCCGGACCTTCTGTaGCAGAGGCTGCTTGGCATTGTGCTCCTCTATCCG | + |
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Preference number: 6 (lower is better) Translates to: GLLYLHRHPDLL*QRLLGIVLLYP Trigger: CGGATAGAGGAGCACAATGCCAAGCAGCCTCTGCCACAGAAGGTCCGGGTGTCGGTGGAGATAGAGAAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS CAA 90 bp | CATCTCTGGGACAGGCACCTGCGATCCGTGTCTTCCTCTGGGTATTaGTCCACCACATTGATGATGTCCAGCACCACCAGCCCCACGCAC | + |
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Preference number: 6 (lower is better) Translates to: HLWDRHLRSVSSSGY*STTLMMSSTTSPTH Trigger: GTGCGTGGGGCTGGTGGTGCTGGACATCATCAATGTGGTGGACAAATACCCAGAGGAAGACACGGATCGCAGGTGCCTGTCCCAGAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS CAA 72 bp | CTCAGGGCCTCCACTGCTGACTGGAACCCCAGGTGCTaGGCCACATCTTTGCTGACAAACACCACCTCACCA | + |
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Preference number: 6 (lower is better) Translates to: LRASTADWNPRC*ATSLLTNTTSP Trigger: TGGTGAGGTGGTGTTTGTCAGCAAAGATGTGGCCAAGCACCTGGGGTTCCAGTCAGCAGTGGAGGCCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS CAA 72 bp | CTTGCCAGCCACCTGGCACCCGAATCTCAGGGCCTCTaGCATGCTGTTTCCCTTCGAGAGGCTGAAGATGAC | + |
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Preference number: 6 (lower is better) Translates to: LASHLAPESQGL*HAVSLREAEDD Trigger: GTCATCTTCAGCCTCTCGAAGGGAAACAGCATGCAAGAGGCCCTGAGATTCGGGTGCCAGGTGGCTGGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 |
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| CDS CAA 72 bp | CACACAATGCCATCAAACCCCTGCAAGCCACACTTCTaGCCAGCCACCTGGCACCCGAATCTCAGGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: HTMPSNPCKPHF*PATWHPNLRAS Trigger: AGAGGCCCTGAGATTCGGGTGCCAGGTGGCTGGCAAGAAGTGTGGCTTGCAGGGGTTTGATGGCATTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 |
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| CDS CCA 72 bp | CAGATCGACCTTCTCAAAGTCCTTAGCAGACACATCTaGCAGGTTCTCGGCAACGTGGCCAGGGGCCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: QIDLLKVLSRHI*QVLGNVARGQR Trigger: TCTTTGGCCCCTGGCCACGTTGCCGAGAACCTGCCAGATGTGTCTGCTAAGGACTTTGAGAAGGTCGATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201571.4 |
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| CDS CAA 90 bp | TCTTGCATGCTGTTTCCCTTCGAGAGGCTGAAGATGACAGAGGCATaGAAGGTGTCTCCAGCCCCAAGAGTGTCTACTACTCGGGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: SCMLFPFERLKMTEA*KVSPAPRVSTTRGG Trigger: ACCGCCCCGAGTAGTAGACACTCTTGGGGCTGGAGACACCTTCAATGCCTCTGTCATCTTCAGCCTCTCGAAGGGAAACAGCATGCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 |
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| CDS CAA 72 bp | TGTTCCGATGCATTCCGGCCCTCAATGTGGATCCACTaGAACCGGGTCAGATCGACCTTCTCAAAGTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: CSDAFRPSMWIH*NRVRSTFSKSL Trigger: TAAGGACTTTGAGAAGGTCGATCTGACCCGGTTCAAGTGGATCCACATTGAGGGCCGGAATGCATCGGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 ENSMUST00000202752.2 |
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| CDS CAA 72 bp | CTGTTTCCCTTCGAGAGGCTGAAGATGACAGAGGCATaGAAGGTGTCTCCAGCCCCAAGAGTGTCTACTACT | + |
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Preference number: 6 (lower is better) Translates to: LFPFERLKMTEA*KVSPAPRVSTT Trigger: AGTAGTAGACACTCTTGGGGCTGGAGACACCTTCAATGCCTCTGTCATCTTCAGCCTCTCGAAGGGAAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031053.15 ENSMUST00000201571.4 ENSMUST00000201621.4 |
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| CDS CCA 72 bp | CAGATCGACCTTCTCAAAGTCCTTAGCAGACACATCTaGCAGGTTCGTGTCGTAGAGTATAATGGTACGGGA | + |
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Preference number: 6 (lower is better) Translates to: QIDLLKVLSRHI*QVRVVEYNGTG Trigger: TCCCGTACCATTATACTCTACGACACGAACCTGCCAGATGTGTCTGCTAAGGACTTTGAGAAGGTCGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031053.15 ENSMUST00000201621.4 |
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