Pregenerated sensors for KHDRBS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022332Ensembl transcript IDs: ENSMUST00000022954.7, ENSMUST00000229234.2, ENSMUST00000229683.2, ENSMUST00000230073.2, ENSMUST00000230847.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCAGAAGCAGGTCCTTTGTCTGCTCTAAGTCACTTGGAGCTCTCTaGCAGTCCAAGGTGGTCGACATTTCTTTGAACAGTATACAGGAC | + |
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Preference number: 1 (lower is better) Translates to: PRSRSFVCSKSLGAL*QSKVVDISLNSIQD Trigger: GTCCTGTATACTGTTCAAAGAAATGTCGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACTTAGAGCAGACAAAGGACCTGCTTCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
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| 3UTR TCA 90 bp | AGTCACTTGGAGCTCTCTGACAGTCCAAGGTGGTCGACATTTCTTTaGACAGTATACAGGACGGTGGAGATTGGCTATTTCACAACATCA | + |
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Preference number: 1 (lower is better) Translates to: SHLELSDSPRWSTFL*TVYRTVEIGYFTTS Trigger: TGATGTTGTGAAATAGCCAATCTCCACCGTCCTGTATACTGTTCAAAGAAATGTCGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
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| 3UTR GCA 90 bp | ACCTCAATTAGGCAAGTCAGAATGTCTTTAAAAGCTCTCTGTTTATaGTTCCAGCATGGAGCGAGGTGTTCATTAAGGTACCAAAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: TSIRQVRMSLKALCL*FQHGARCSLRYQKS Trigger: AGACTTTTGGTACCTTAATGAACACCTCGCTCCATGCTGGAAGCATAAACAGAGAGCTTTTAAAGACATTCTGACTTGCCTAATTGAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229234.2 |
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| 3UTR TCA 90 bp | ACCACTTTTAAAGGAAGCTGTACAATATTTAGTGTGACCCTTTTATaGCAAGCGCTGTTAGAGGAGCCCTTTCCCTGTTTACAGCTATTT | + |
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Preference number: 1 (lower is better) Translates to: TTFKGSCTIFSVTLL*QALLEEPFPCLQLF Trigger: AAATAGCTGTAAACAGGGAAAGGGCTCCTCTAACAGCGCTTGTCATAAAAGGGTCACACTAAATATTGTACAGCTTCCTTTAAAAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229234.2 |
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| 3UTR TCA 90 bp | AGCTTGATACCGTGTGGACTCTTTAGACCGCATCTGAACCTATGGTaGGTATACCATGGCACGTTTAATTTTATACCACTTTTAAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: SLIPCGLFRPHLNLW*VYHGTFNFIPLLKE Trigger: TTCCTTTAAAAGTGGTATAAAATTAAACGTGCCATGGTATACTCACCATAGGTTCAGATGCGGTCTAAAGAGTCCACACGGTATCAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229234.2 |
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| 3UTR GCA 90 bp | TACAGAACATTTCAGGACTCAGTTACAAAAGAATACCACATTGTCTaGACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: YRTFQDSVTKEYHIV*TCNRLPFYASWQER Trigger: TCTTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTGGTATTCTTTTGTAACTGAGTCCTGAAATGTTCTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| 3UTR CCA 90 bp | ACTGCAAATAACAAAATTTTACATGTCCTTCTTCTCCCTGTCAAGTaGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTT | + |
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Preference number: 1 (lower is better) Translates to: TANNKILHVLLLPVK*MLQQSGFKFHPFRF Trigger: AAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATTTTGTTATTTGCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| 3UTR-3UTR CCA 90 bp | AATCGATTGATGACTGTCACGTTGGCGAGCCAGTGGTTCATTTGCCGAGTAGGCCAGGACGGTGGAGATTaGCTATTTCACAACATCAGA | + |
|
Preference number: 2 (lower is better) Translates to: NRLMTVTLASQWFICRVGQDGGD*LFHNIR Trigger: TCTGATGTTGTGAAATAGCCAATCTCCACCGTCCTG...GCCTACTCGGCAAATGAACCACTGGCTCGCCAACGTGACAGTCATCAATCGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| 3UTR CAA 90 bp | ACAAATCTGGGACAAAACAACAATAATCGATTGATGACTGTCACGTaGGCGAGCCAGTGGTTCATTTGCCGAGTAGGCATGATGGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: TNLGQNNNNRLMTVT*ASQWFICRVGMMVR Trigger: CCTCACCATCATGCCTACTCGGCAAATGAACCACTGGCTCGCCAACGTGACAGTCATCAATCGATTATTGTTGTTTTGTCCCAGATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| 3UTR-3UTR CCA 90 bp | ACCACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAACAGGACGGTGGAGATTaGCTATTTCACAACATCAGA | + |
|
Preference number: 2 (lower is better) Translates to: TTLSALVIGSLFTQVGKKQDGGD*LFHNIR Trigger: TCTGATGTTGTGAAATAGCCAATCTCCACCGTCCTG...TTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAGTCACTTGGAGCTCTCTGACAGTCCAAGGTGGTCGACATTTCCTAACAAAAAACGCTCGACAAGATaGAATCTGATCACATCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LSHLELSDSPRWSTFPNKKRSTR*NLITSF Trigger: AAAGGATGTGATCAGATTTCATCTTGTCGAGCGTTT...TTTGTTAGGAAATGTCGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACTTAG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000229234.2 |
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| 3UTR-3UTR GCA 90 bp | GAATACCACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAATCCCTGTCAAGTGGATaGTTCAACAAAGTGGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: EYHIVCTCNRLPFYASWQSLSSG*FNKVAL Trigger: TAAAGCCACTTTGTTGAAGCATCCACTTGACAGGGA...TTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTGGTATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGAAAGAAAGCAGGACGGTGGAGATTaGCTATTTCACAACATCAGA | + |
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Preference number: 2 (lower is better) Translates to: SALVIGSLFTQVGKKERKQDGGD*LFHNIR Trigger: TCTGATGTTGTGAAATAGCCAATCTCCACCGTCCTG...CTTTCTTTCTTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGAAAGAAACAGGACGGTGGAGATTaGCTATTTCACAACATCAGA | + |
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Preference number: 2 (lower is better) Translates to: VCTCNRLPFYASWQERKKQDGGD*LFHNIR Trigger: TCTGATGTTGTGAAATAGCCAATCTCCACCGTCCTG...TTTCTTTCTTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| 3UTR CAA 90 bp | AAGCATTCCAAAAACACAAATCTGGGACAAAACAACAATAATCGATaGATGACTGTCACGTTGGCGAGCCAGTGGTTCATTTGCCGAGTA | + |
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Preference number: 2 (lower is better) Translates to: KHSKNTNLGQNNNNR*MTVTLASQWFICRV Trigger: TACTCGGCAAATGAACCACTGGCTCGCCAACGTGACAGTCATCAATCGATTATTGTTGTTTTGTCCCAGATTTGTGTTTTTGGAATGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| 3UTR-3UTR TCA 90 bp | AACACAAATCTGGGACAAAACAACAATAATCGATTGATGACTGTCACGTTGGCGTGGTCGACATTTCTTTaGACAGTATACAGGACGGTG | + |
|
Preference number: 2 (lower is better) Translates to: NTNLGQNNNNRLMTVTLAWSTFL*TVYRTV Trigger: CACCGTCCTGTATACTGTTCAAAGAAATGTCGACCA...CGCCAACGTGACAGTCATCAATCGATTATTGTTGTTTTGTCCCAGATTTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGAAAGAAAGTCCCTGTCAAGTGGATaGTTCAACAAAGTGGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: SALVIGSLFTQVGKKERKSLSSG*FNKVAL Trigger: TAAAGCCACTTTGTTGAAGCATCCACTTGACAGGGA...CTTTCTTTCTTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTCCAAGGTGGTCGACATTTCCTAACAAAAGAAGAAATCTGTTTACTCAAAAGTGTGACCCTTTTATaGCAAGCGCTGTTAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: TVQGGRHFLTKEEICLLKSVTLL*QALLEE Trigger: CTCCTCTAACAGCGCTTGTCATAAAAGGGTCACACT...TTTGAGTAAACAGATTTCTTCTTTTGTTAGGAAATGTCGACCACCTTGGACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000229234.2 |
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| 3UTR-3UTR CCA 90 bp | CAAATAACAAAATTTTACATGTCCTTCTTCTCCCTGTCAAGTGGATGCTTCAACCAGTATACAGGACGGTaGAGATTGGCTATTTCACAA | + |
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Preference number: 2 (lower is better) Translates to: QITKFYMSFFSLSSGCFNQYTGR*RLAISQ Trigger: TTGTGAAATAGCCAATCTCCACCGTCCTGTATACTG...GTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATTTTGTTATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| 3UTR TCA 72 bp | CAGTGGTTCATTTGCCGAGTAGGCATGATGGTGAGGTaGGTGTCCTTAAGCGGCCTCCCCAGAAGCAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: QWFICRVGMMVR*VSLSGLPRSRS Trigger: GGACCTGCTTCTGGGGAGGCCGCTTAAGGACACTCACCTCACCATCATGCCTACTCGGCAAATGAACCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| 3UTR TCA 72 bp | GAGCTCTCTGACAGTCCAAGGTGGTCGACATTTCTTTaGACAGTATACAGGACGGTGGAGATTGGCTATTTC | + |
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Preference number: 3 (lower is better) Translates to: ELSDSPRWSTFL*TVYRTVEIGYF Trigger: GAAATAGCCAATCTCCACCGTCCTGTATACTGTTCAAAGAAATGTCGACCACCTTGGACTGTCAGAGAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
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| 3UTR TCA 72 bp | AGGTCCTTTGTCTGCTCTAAGTCACTTGGAGCTCTCTaGCAGTCCAAGGTGGTCGACATTTCTTTGAACAGT | + |
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Preference number: 3 (lower is better) Translates to: RSFVCSKSLGAL*QSKVVDISLNS Trigger: ACTGTTCAAAGAAATGTCGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACTTAGAGCAGACAAAGGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
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| 3UTR CCA 72 bp | AATGAAGACCGTTTAAGGCTTACACATCCTCAGCCTTaGCGAGTGCGACCTCAATTAGGCAAGTCAGAATGT | + |
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Preference number: 3 (lower is better) Translates to: NEDRLRLTHPQP*RVRPQLGKSEC Trigger: ACATTCTGACTTGCCTAATTGAGGTCGCACTCGCCAAGGCTGAGGATGTGTAAGCCTTAAACGGTCTTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229234.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGAAAGAAAGACAGGACGGTGGAGATaGGCTATTTCACAACATCAG | + |
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Preference number: 3 (lower is better) Translates to: SALVIGSLFTQVGKKERKTGRWR*AISQHQ Trigger: CTGATGTTGTGAAATAGCCAATCTCCACCGTCCTGT...CTTTCTTTCTTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| 3UTR-3UTR CAA 90 bp | AACACAAATCTGGGACAAAACAACAATAATCGATTGATGACTGTCACGTTGGCGACAGGACGGTGGAGATaGGCTATTTCACAACATCAG | + |
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Preference number: 3 (lower is better) Translates to: NTNLGQNNNNRLMTVTLATGRWR*AISQHQ Trigger: CTGATGTTGTGAAATAGCCAATCTCCACCGTCCTGT...CGCCAACGTGACAGTCATCAATCGATTATTGTTGTTTTGTCCCAGATTTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| 3UTR TCA 72 bp | CCGTGTGGACTCTTTAGACCGCATCTGAACCTATGGTaGGTATACCATGGCACGTTTAATTTTATACCACTT | + |
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Preference number: 3 (lower is better) Translates to: PCGLFRPHLNLW*VYHGTFNFIPL Trigger: AAGTGGTATAAAATTAAACGTGCCATGGTATACTCACCATAGGTTCAGATGCGGTCTAAAGAGTCCACACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229234.2 |
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| 3UTR CCA 72 bp | GGTGGTCGACATTTCTTTGAACAGTATACAGGACGGTaGAGATTGGCTATTTCACAACATCAGACAGTACAA | + |
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Preference number: 3 (lower is better) Translates to: GGRHFFEQYTGR*RLAISQHQTVQ Trigger: TTGTACTGTCTGATGTTGTGAAATAGCCAATCTCCACCGTCCTGTATACTGTTCAAAGAAATGTCGACCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTCAAGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTACAGGACGGTGGAGATaGGCTATTTCACAACATCAG | + |
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Preference number: 3 (lower is better) Translates to: LSSGCFNKVALSSIHSDFTGRWR*AISQHQ Trigger: CTGATGTTGTGAAATAGCCAATCTCCACCGTCCTGT...AAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACTTGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| 3UTR TCA 72 bp | AAAGGAAGCTGTACAATATTTAGTGTGACCCTTTTATaGCAAGCGCTGTTAGAGGAGCCCTTTCCCTGTTTA | + |
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Preference number: 3 (lower is better) Translates to: KGSCTIFSVTLL*QALLEEPFPCL Trigger: TAAACAGGGAAAGGGCTCCTCTAACAGCGCTTGTCATAAAAGGGTCACACTAAATATTGTACAGCTTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229234.2 |
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| 3UTR-3UTR CAA 90 bp | AAAAACACAAATCTGGGACAAAACAACAATAATCGATTGATGACTGTCACGTTGGTGGTCGACATTTCTTaGAACAGTATACAGGACGGT | + |
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Preference number: 3 (lower is better) Translates to: KNTNLGQNNNNRLMTVTLVVDIS*NSIQDG Trigger: ACCGTCCTGTATACTGTTCAAAGAAATGTCGACCAC...CAACGTGACAGTCATCAATCGATTATTGTTGTTTTGTCCCAGATTTGTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
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| CDS-3UTR TCA 90 bp | GGTCCTTTGTCTGCTCTAAGTCACTTGGAGCTCTCTGACAGTCCAAGGTGGTCGAGCGCAGGGCGTGCGTaGAGGAGGGGTCCAGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: GPLSALSHLELSDSPRWSSAGRA*RRGPES Trigger: ACTCTCTGGACCCCTCCTTCACGCACGCCCTGCGCT...CGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACTTAGAGCAGACAAAGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| CDS-3UTR CCA 90 bp | GGTCCTTTGTCTGCTCTAAGTCACTTGGAGCTCTCTGACAGTCCAAGGTGGTCGTCTTCCCCGGCTCACTaGCCCTCGGGTGGAAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: GPLSALSHLELSDSPRWSSSPAH*PSGGKD Trigger: GTCCTTTCCACCCGAGGGCCAGTGAGCCGGGGAAGA...CGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACTTAGAGCAGACAAAGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| CDS-3UTR TCA 90 bp | AATCGATTGATGACTGTCACGTTGGCGAGCCAGTGGTTCATTTGCCGAGTAGGCCAACAGGCCTGGCTGTaGCTCCTCCTCTTCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: NRLMTVTLASQWFICRVGQQAWL*LLLFPW Trigger: CCAGGGGAAGAGGAGGAGTCACAGCCAGGCCTGTTG...GCCTACTCGGCAAATGAACCACTGGCTCGCCAACGTGACAGTCATCAATCGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| CDS-3UTR TCA 90 bp | TTGTCTGCTCTAAGTCACTTGGAGCTCTCTGACAGTCCAAGGTGGTCGACATTTAGCGCAGGGCGTGCGTaGAGGAGGGGTCCAGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: LSALSHLELSDSPRWSTFSAGRA*RRGPES Trigger: ACTCTCTGGACCCCTCCTTCACGCACGCCCTGCGCT...AAATGTCGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACTTAGAGCAGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| CDS-3UTR GCA 90 bp | GGTCCTTTGTCTGCTCTAAGTCACTTGGAGCTCTCTGACAGTCCAAGGTGGTCGAGCGCTTCAGGGAATTaGCACGCGGACCCAAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: GPLSALSHLELSDSPRWSSASGN*HADPKA Trigger: AGCTTTTGGGTCCGCGTGGCAATTCCCTGAAGCGCT...CGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACTTAGAGCAGACAAAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| CDS-3UTR GCA 90 bp | GGTCCTTTGTCTGCTCTAAGTCACTTGGAGCTCTCTGACAGTCCAAGGTGGTCGATCTCTTCCAAGGCGTaGCCCATCCGGGCATATGCT | + |
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Preference number: 4 (lower is better) Translates to: GPLSALSHLELSDSPRWSISSKA*PIRAYA Trigger: AGCATATGCCCGGATGGGGCACGCCTTGGAAGAGAT...CGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACTTAGAGCAGACAAAGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| CDS-3UTR TCA 90 bp | CACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGAAGCGCAGGGCGTGCGTaGAGGAGGGGTCCAGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: HIVCTCNRLPFYASWQERSAGRA*RRGPES Trigger: ACTCTCTGGACCCCTCCTTCACGCACGCCCTGCGCT...TCTTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| CDS-3UTR CCA 90 bp | AATCGATTGATGACTGTCACGTTGGCGAGCCAGTGGTTCATTTGCCGAGTAGGCAGGTCTGTATCCGGTTaGGGGGACACCTCTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: NRLMTVTLASQWFICRVGRSVSG*GDTSCS Trigger: AGAGCAAGAGGTGTCCCCCCAACCGGATACAGACCT...GCCTACTCGGCAAATGAACCACTGGCTCGCCAACGTGACAGTCATCAATCGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| CDS-3UTR TCA 90 bp | GAATACCACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAACAACAGGCCTGGCTGTaGCTCCTCCTCTTCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: EYHIVCTCNRLPFYASWQQQAWL*LLLFPW Trigger: CCAGGGGAAGAGGAGGAGTCACAGCCAGGCCTGTTG...TTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTGGTATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| CDS-3UTR TCA 90 bp | CAAGGTGGTCGACATTTCTTTGAACAGTATACAGGACGGTGGAGATTGGCTATTCTCTTGCTCTGGGAGTaGGAAGGCCTCTTCCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: QGGRHFFEQYTGRWRLAILLLWE*EGLFPG Trigger: GCCGGGGAAGAGGCCTTCTCACTCCCAGAGCAAGAG...AATAGCCAATCTCCACCGTCCTGTATACTGTTCAAAGAAATGTCGACCACCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
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| CDS-3UTR GCA 90 bp | GGTCCTTTGTCTGCTCTAAGTCACTTGGAGCTCTCTGACAGTCCAAGGTGGTCGCACTTTGTGCTGGGGTaGTGTAGCTGTTGTCATAGG | + |
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Preference number: 4 (lower is better) Translates to: GPLSALSHLELSDSPRWSHFVLG*CSCCHR Trigger: CCTATGACAACAGCTACAGCACCCCAGCACAAAGTG...CGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACTTAGAGCAGACAAAGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| CDS-3UTR CCA 90 bp | GAATACCACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAATCACTGGCCCTCGGGTaGAAAGGACTCCTCGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: EYHIVCTCNRLPFYASWQSLALG*KGLLGE Trigger: CTCCCCGAGGAGTCCTTTCCACCCGAGGGCCAGTGA...TTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTGGTATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| CDS-3UTR CCA 90 bp | ACCACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAATCACTGGCCCTCGGGTaGAAAGGACTCCTCGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TTLSALVIGSLFTQVGKKSLALG*KGLLGE Trigger: CTCCCCGAGGAGTCCTTTCCACCCGAGGGCCAGTGA...TTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| CDS-3UTR TCA 90 bp | TCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGAAAGAAAGCAACAGGCCTGGCTGTaGCTCCTCCTCTTCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SALVIGSLFTQVGKKERKQQAWL*LLLFPW Trigger: CCAGGGGAAGAGGAGGAGTCACAGCCAGGCCTGTTG...CTTTCTTTCTTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| CDS-3UTR CCA 90 bp | GTCGACATTTCTTTGAACAGTATACAGGACGGTGGAGATTGGCTATTTCACAACTCACTGGCCCTCGGGTaGAAAGGACTCCTCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VDISLNSIQDGGDWLFHNSLALG*KGLLGE Trigger: CTCCCCGAGGAGTCCTTTCCACCCGAGGGCCAGTGA...GTTGTGAAATAGCCAATCTCCACCGTCCTGTATACTGTTCAAAGAAATGTCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGAAAGAAATCTTCCCCGGCTCACTaGCCCTCGGGTGGAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VCTCNRLPFYASWQERKKSSPAH*PSGGKD Trigger: GTCCTTTCCACCCGAGGGCCAGTGAGCCGGGGAAGA...TTTCTTTCTTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CCA 90 bp | GTCGACATTTCTTTGAACAGTATACAGGACGGTGGAGATTGGCTATTTCACAACCTCCTGTGTTGGGGGTaGCGGGGGAGGTCTGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: VDISLNSIQDGGDWLFHNLLCWG*RGRSVS Trigger: GGATACAGACCTCCCCCGCCACCCCCAACACAGGAG...GTTGTGAAATAGCCAATCTCCACCGTCCTGTATACTGTTCAAAGAAATGTCGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
||
| CDS-3UTR CCA 90 bp | GAATACCACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAATAGGTCTCCTGTGTTaGGGGTGGCGGGGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EYHIVCTCNRLPFYASWQIGLLC*GWRGRS Trigger: AGACCTCCCCCGCCACCCCCAACACAGGAGACCTAT...TTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTGGTATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CCA 90 bp | ACCACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAATAGGTCTCCTGTGTTaGGGGTGGCGGGGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTLSALVIGSLFTQVGKKIGLLC*GWRGRS Trigger: AGACCTCCCCCGCCACCCCCAACACAGGAGACCTAT...TTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGTGGTCGACATTTCTTTGAACAGTATACAGGACGGTGGAGATTGGCTATTATAGGTCTCCTGTGTTaGGGGTGGCGGGGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGGRHFFEQYTGRWRLAIIGLLC*GWRGRS Trigger: AGACCTCCCCCGCCACCCCCAACACAGGAGACCTAT...AATAGCCAATCTCCACCGTCCTGTATACTGTTCAAAGAAATGTCGACCACCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
||
| 3UTR CAA 72 bp | TCCCCAGAAGCAGGTCCTTTGTCTGCTCTAAGTCACTaGGAGCTCTCTGACAGTCCAAGGTGGTCGACATTT | + |
|
Preference number: 4 (lower is better) Translates to: SPEAGPLSALSH*ELSDSPRWSTF Trigger: AAATGTCGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACTTAGAGCAGACAAAGGACCTGCTTCTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
||
| CDS-3UTR TCA 90 bp | AAAATTTTACATGTCCTTCTTCTCCCTGTCAAGTGGATGCTTCAACAAAGTGGCCTCTTGCTCTGGGAGTaGGAAGGCCTCTTCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KILHVLLLPVKWMLQQSGLLLWE*EGLFPG Trigger: GCCGGGGAAGAGGCCTTCTCACTCCCAGAGCAAGAG...GCCACTTTGTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGTGGTCGACATTTCTTTGAACAGTATACAGGACGGTGGAGATTGGCTATTAGTCGGTGTCCCACGTaGTACCCCAACTGCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGGRHFFEQYTGRWRLAISRCPT*YPNCNR Trigger: CCTGTTGCAGTTGGGGTACCACGTGGGACACCGACT...AATAGCCAATCTCCACCGTCCTGTATACTGTTCAAAGAAATGTCGACCACCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGCATAGCGCAGGGCGTGCGTaGAGGAGGGGTCCAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGCFNKVALSSIHSDFKHSAGRA*RRGPES Trigger: ACTCTCTGGACCCCTCCTTCACGCACGCCCTGCGCT...ATGCTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCTGCTCTAAGTCACTTGGAGCTCTCTGACAGTCCAAGGTGGTCGACATTTCAGCTCTTCCTCCTTTaGCTTGTCTCTCATGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LSALSHLELSDSPRWSTFQLFLL*LVSHGT Trigger: GGTTCCATGAGAGACAAGGCAAAGGAGGAAGAGCTG...AAATGTCGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACTTAGAGCAGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCTGCTCTAAGTCACTTGGAGCTCTCTGACAGTCCAAGGTGGTCGACATTTCACTTTGTGCTGGGGTaGTGTAGCTGTTGTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSALSHLELSDSPRWSTFHFVLG*CSCCHR Trigger: CCTATGACAACAGCTACAGCACCCCAGCACAAAGTG...AAATGTCGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACTTAGAGCAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGAAAGAAAGAGTCGGTGTCCCACGTaGTACCCCAACTGCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SALVIGSLFTQVGKKERKSRCPT*YPNCNR Trigger: CCTGTTGCAGTTGGGGTACCACGTGGGACACCGACT...CTTTCTTTCTTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CCA 90 bp | AATTTTACATGTCCTTCTTCTCCCTGTCAAGTGGATGCTTCAACAAAGTGGCTTATAGGTCTCCTGTGTTaGGGGTGGCGGGGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NFTCPSSPCQVDASTKWLIGLLC*GWRGRS Trigger: AGACCTCCCCCGCCACCCCCAACACAGGAGACCTAT...AAGCCACTTTGTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGCATCAACAGGCCTGGCTGTaGCTCCTCCTCTTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGCFNKVALSSIHSDFKHQQAWL*LLLFPW Trigger: CCAGGGGAAGAGGAGGAGTCACAGCCAGGCCTGTTG...ATGCTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR TCA 90 bp | TCAAGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGCTCTTGCTCTGGGAGTaGGAAGGCCTCTTCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSGCFNKVALSSIHSDFKLLLWE*EGLFPG Trigger: GCCGGGGAAGAGGCCTTCTCACTCCCAGAGCAAGAG...CTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR TCA 90 bp | CAAATAACAAAATTTTACATGTCCTTCTTCTCCCTGTCAAGTGGATGCTTCAACCTCTTGCTCTGGGAGTaGGAAGGCCTCTTCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QITKFYMSFFSLSSGCFNLLLWE*EGLFPG Trigger: GCCGGGGAAGAGGCCTTCTCACTCCCAGAGCAAGAG...GTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATTTTGTTATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR GCA 90 bp | CTAAGTCACTTGGAGCTCTCTGACAGTCCAAGGTGGTCGACATTTCCTAACAAACAGCTCTTCCTCCTTTaGCTTGTCTCTCATGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LSHLELSDSPRWSTFPNKQLFLL*LVSHGT Trigger: GGTTCCATGAGAGACAAGGCAAAGGAGGAAGAGCTG...TTTGTTAGGAAATGTCGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229234.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGTCACTGGCCCTCGGGTaGAAAGGACTCCTCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGCFNKVALSSIHSDFKSLALG*KGLLGE Trigger: CTCCCCGAGGAGTCCTTTCCACCCGAGGGCCAGTGA...CTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGCATTCTTCCCCGGCTCACTaGCCCTCGGGTGGAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGCFNKVALSSIHSDFKHSSPAH*PSGGKD Trigger: GTCCTTTCCACCCGAGGGCCAGTGAGCCGGGGAAGA...ATGCTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGAAAGAAAAGGTCTGTATCCGGTTaGGGGGACACCTCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCTCNRLPFYASWQERKKRSVSG*GDTSCS Trigger: AGAGCAAGAGGTGTCCCCCCAACCGGATACAGACCT...TTTCTTTCTTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGCTCCTGTGTTGGGGGTaGCGGGGGAGGTCTGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: SSGCFNKVALSSIHSDFKLLCWG*RGRSVS Trigger: GGATACAGACCTCCCCCGCCACCCCCAACACAGGAG...CTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGCATCTCCTGTGTTGGGGGTaGCGGGGGAGGTCTGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: SGCFNKVALSSIHSDFKHLLCWG*RGRSVS Trigger: GGATACAGACCTCCCCCGCCACCCCCAACACAGGAG...ATGCTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR TCA 90 bp | GGTCCTTTGTCTGCTCTAAGTCACTTGGAGCTCTCTGACAGTCCAAGGTGGTCGGACATCTGCATTTTCTaGACCTCCATTCAAATATGT | + |
|
Preference number: 4 (lower is better) Translates to: GPLSALSHLELSDSPRWSDICIF*TSIQIC Trigger: ACATATTTGAATGGAGGTTCAGAAAATGCAGATGTC...CGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACTTAGAGCAGACAAAGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
||
| CDS-3UTR GCA 90 bp | AATTTTACATGTCCTTCTTCTCCCTGTCAAGTGGATGCTTCAACAAAGTGGCTTATCTCTTCCAAGGCGTaGCCCATCCGGGCATATGCT | + |
|
Preference number: 4 (lower is better) Translates to: NFTCPSSPCQVDASTKWLISSKA*PIRAYA Trigger: AGCATATGCCCGGATGGGGCACGCCTTGGAAGAGAT...AAGCCACTTTGTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
||
| CDS-3UTR GCA 90 bp | AAAATTTTACATGTCCTTCTTCTCCCTGTCAAGTGGATGCTTCAACAAAGTGGCATCTCTTCCAAGGCGTaGCCCATCCGGGCATATGCT | + |
|
Preference number: 4 (lower is better) Translates to: KILHVLLLPVKWMLQQSGISSKA*PIRAYA Trigger: AGCATATGCCCGGATGGGGCACGCCTTGGAAGAGAT...GCCACTTTGTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
||
| CDS-3UTR GCA 90 bp | GAATACCACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAACACTTTGTGCTGGGGTaGTGTAGCTGTTGTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: EYHIVCTCNRLPFYASWQHFVLG*CSCCHR Trigger: CCTATGACAACAGCTACAGCACCCCAGCACAAAGTG...TTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTGGTATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CCA 90 bp | GAATACCACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGGCATATGCTTCTGCTaGGGGTGCGAACACTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: EYHIVCTCNRLPFYASWQGICFC*GCEHFN Trigger: ATTGAAGTGTTCGCACCCCCAGCAGAAGCATATGCC...TTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTGGTATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACACAAATCTGGGACAAAACAACAATAATCGATTGATGACTGTCACGTTGTCTTCCCCGGCTCACTaGCCCTCGGGTGGAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KNTNLGQNNNNRLMTVTLSSPAH*PSGGKD Trigger: GTCCTTTCCACCCGAGGGCCAGTGAGCCGGGGAAGA...CAACGTGACAGTCATCAATCGATTATTGTTGTTTTGTCCCAGATTTGTGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCAAGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAGCGCTTCAGGGAATTaGCACGCGGACCCAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSGCFNKVALSSIHSDFSASGN*HADPKA Trigger: AGCTTTTGGGTCCGCGTGGCAATTCCCTGAAGCGCT...AAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACTTGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
||
| CDS-3UTR CCA 90 bp | AATCGATTGATGACTGTCACGTTGGCGAGCCAGTGGTTCATTTGCCGAGTAGGCAACCTTTGCCAAGGATaGACATTTTTGTCAACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NRLMTVTLASQWFICRVGNLCQG*TFLSTF Trigger: AAACGTTGACAAAAATGTCCATCCTTGGCAAAGGTT...GCCTACTCGGCAAATGAACCACTGGCTCGCCAACGTGACAGTCATCAATCGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
||
| CDS-3UTR CCA 90 bp | AAGGTGGTCGACATTTCTTTGAACAGTATACAGGACGGTGGAGATTGGCTATTTGGCATATGCTTCTGCTaGGGGTGCGAACACTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KVVDISLNSIQDGGDWLFGICFC*GCEHFN Trigger: ATTGAAGTGTTCGCACCCCCAGCAGAAGCATATGCC...AAATAGCCAATCTCCACCGTCCTGTATACTGTTCAAAGAAATGTCGACCACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGCATAGTCGGTGTCCCACGTaGTACCCCAACTGCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGCFNKVALSSIHSDFKHSRCPT*YPNCNR Trigger: CCTGTTGCAGTTGGGGTACCACGTGGGACACCGACT...ATGCTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTCCAAGGTGGTCGACATTTCCTAACAAAAGAAGAAATCTGTTTACTCAAAAGTCGGTGTCCCACGTaGTACCCCAACTGCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVQGGRHFLTKEEICLLKSRCPT*YPNCNR Trigger: CCTGTTGCAGTTGGGGTACCACGTGGGACACCGACT...TTTGAGTAAACAGATTTCTTCTTTTGTTAGGAAATGTCGACCACCTTGGACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000229234.2 |
||
| CDS-3UTR CCA 90 bp | AAGGTGGTCGACATTTCTTTGAACAGTATACAGGACGGTGGAGATTGGCTATTTTCAGTATCTGCCATATaGCTGGTCTCTGTAGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: KVVDISLNSIQDGGDWLFSVSAI*LVSVDA Trigger: GGCGTCTACAGAGACCAGCCATATGGCAGATACTGA...AAATAGCCAATCTCCACCGTCCTGTATACTGTTCAAAGAAATGTCGACCACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
||
| CDS-3UTR TCA 90 bp | GTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGAAAGAAAAGGTCGTCATTGAGGTaGAAGTACTTCGCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VCTCNRLPFYASWQERKKRSSLR*KYFASP Trigger: TGGAGAAGCGAAGTACTTTCACCTCAATGACGACCT...TTTCTTTCTTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
||
| CDS-3UTR GCA 90 bp | AAAATTTTACATGTCCTTCTTCTCCCTGTCAAGTGGATGCTTCAACAAAGTGGCCAGCTCTTCCTCCTTTaGCTTGTCTCTCATGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: KILHVLLLPVKWMLQQSGQLFLL*LVSHGT Trigger: GGTTCCATGAGAGACAAGGCAAAGGAGGAAGAGCTG...GCCACTTTGTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
||
| CDS-3UTR CCA 90 bp | AAAATTTTACATGTCCTTCTTCTCCCTGTCAAGTGGATGCTTCAACAAAGTGGCGGCATATGCTTCTGCTaGGGGTGCGAACACTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KILHVLLLPVKWMLQQSGGICFC*GCEHFN Trigger: ATTGAAGTGTTCGCACCCCCAGCAGAAGCATATGCC...GCCACTTTGTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGAGGTCTGTATCCGGTTaGGGGGACACCTCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGCFNKVALSSIHSDFKRSVSG*GDTSCS Trigger: AGAGCAAGAGGTGTCCCCCCAACCGGATACAGACCT...CTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CCA 90 bp | AAAATTTTACATGTCCTTCTTCTCCCTGTCAAGTGGATGCTTCAACAAAGTGGCTCAGTATCTGCCATATaGCTGGTCTCTGTAGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: KILHVLLLPVKWMLQQSGSVSAI*LVSVDA Trigger: GGCGTCTACAGAGACCAGCCATATGGCAGATACTGA...GCCACTTTGTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CCA 90 bp | AACACAAATCTGGGACAAAACAACAATAATCGATTGATGACTGTCACGTTGGCGTCAGTATCTGCCATATaGCTGGTCTCTGTAGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: NTNLGQNNNNRLMTVTLASVSAI*LVSVDA Trigger: GGCGTCTACAGAGACCAGCCATATGGCAGATACTGA...CGCCAACGTGACAGTCATCAATCGATTATTGTTGTTTTGTCCCAGATTTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
||
| CDS-3UTR TCA 90 bp | TCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGAAAGAAAGAGGAGCCTTATGTCTTaGGTTAGTCCATTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SALVIGSLFTQVGKKERKRSLMS*VSPFLL Trigger: CAAGAGGAATGGACTAACTCAAGACATAAGGCTCCT...CTTTCTTTCTTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR GCA 90 bp | ACCACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAACTCTCATGGAACCTTTaGCAAGGATGGACATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TTLSALVIGSLFTQVGKKLSWNL*QGWTFL Trigger: CAAAAATGTCCATCCTTGGCAAAGGTTCCATGAGAG...TTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTGGTCGACATTTCTTTGAACAGTATACAGGACGGTGGAGATTGGCTATTTGGAGTTGTGCTTGCCTaGTTTCATCATTATAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KVVDISLNSIQDGGDWLFGVVLA*FHHYSQ Trigger: CTGACTATAATGATGAAATCAGGCAAGCACAACTCC...AAATAGCCAATCTCCACCGTCCTGTATACTGTTCAAAGAAATGTCGACCACCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
||
| CDS-3UTR GCA 90 bp | CAAATAACAAAATTTTACATGTCCTTCTTCTCCCTGTCAAGTGGATGCTTCAACCACTTTGTGCTGGGGTaGTGTAGCTGTTGTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: QITKFYMSFFSLSSGCFNHFVLG*CSCCHR Trigger: CCTATGACAACAGCTACAGCACCCCAGCACAAAGTG...GTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATTTTGTTATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGTCAGTATCTGCCATATaGCTGGTCTCTGTAGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSGCFNKVALSSIHSDFKSVSAI*LVSVDA Trigger: GGCGTCTACAGAGACCAGCCATATGGCAGATACTGA...CTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR TCA 90 bp | AATTTTACATGTCCTTCTTCTCCCTGTCAAGTGGATGCTTCAACAAAGTGGCTTGGAGTTGTGCTTGCCTaGTTTCATCATTATAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NFTCPSSPCQVDASTKWLGVVLA*FHHYSQ Trigger: CTGACTATAATGATGAAATCAGGCAAGCACAACTCC...AAGCCACTTTGTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
||
| CDS-3UTR TCA 90 bp | ACCACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGACATCTGCATTTTCTaGACCTCCATTCAAATATGT | + |
|
Preference number: 4 (lower is better) Translates to: TTLSALVIGSLFTQVGKKDICIF*TSIQIC Trigger: ACATATTTGAATGGAGGTTCAGAAAATGCAGATGTC...TTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR TCA 90 bp | AAAATTTTACATGTCCTTCTTCTCCCTGTCAAGTGGATGCTTCAACAAAGTGGCGGAGTTGTGCTTGCCTaGTTTCATCATTATAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KILHVLLLPVKWMLQQSGGVVLA*FHHYSP Trigger: AGGACTATAATGATGAAATCAGGCAAGCACAACTCC...GCCACTTTGTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230847.2 |
||
| CDS-3UTR GCA 90 bp | AAAATTTTACATGTCCTTCTTCTCCCTGTCAAGTGGATGCTTCAACAAAGTGGCCTCTCATGGAACCTTTaGCAAGGATGGACATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KILHVLLLPVKWMLQQSGLSWNL*QGWTFL Trigger: CAAAAATGTCCATCCTTGGCAAAGGTTCCATGAGAG...GCCACTTTGTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
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| CDS-3UTR GCA 90 bp | AACACAAATCTGGGACAAAACAACAATAATCGATTGATGACTGTCACGTTGGCGCTCTCATGGAACCTTTaGCAAGGATGGACATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NTNLGQNNNNRLMTVTLALSWNL*QGWTFL Trigger: CAAAAATGTCCATCCTTGGCAAAGGTTCCATGAGAG...CGCCAACGTGACAGTCATCAATCGATTATTGTTGTTTTGTCCCAGATTTGTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
||
| CDS-3UTR CCA 90 bp | GAATACCACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAAACCTTTGCCAAGGATaGACATTTTTGTCAACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EYHIVCTCNRLPFYASWQNLCQG*TFLSTF Trigger: AAACGTTGACAAAAATGTCCATCCTTGGCAAAGGTT...TTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTGGTATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
||
| CDS-3UTR CCA 90 bp | GAATACCACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAAAATATGTTAACTCCTaGAGTTGTGCTTGCCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: EYHIVCTCNRLPFYASWQKYVNS*SCACLI Trigger: AATCAGGCAAGCACAACTCCAGGAGTTAACATATTT...TTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTGGTATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGCATAGGAGCCTTATGTCTTaGGTTAGTCCATTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGCFNKVALSSIHSDFKHRSLMS*VSPFLL Trigger: CAAGAGGAATGGACTAACTCAAGACATAAGGCTCCT...ATGCTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| CDS-3UTR CCA 90 bp | GTCGACATTTCTTTGAACAGTATACAGGACGGTGGAGATTGGCTATTTCACAACAAATATGTTAACTCCTaGAGTTGTGCTTGCCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: VDISLNSIQDGGDWLFHNKYVNS*SCACLI Trigger: AATCAGGCAAGCACAACTCCAGGAGTTAACATATTT...GTTGTGAAATAGCCAATCTCCACCGTCCTGTATACTGTTCAAAGAAATGTCGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
||
| 3UTR CAA 72 bp | AAAAACACAAATCTGGGACAAAACAACAATAATCGATaGATGACTGTCACGTTGGCGAGCCAGTGGTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: KNTNLGQNNNNR*MTVTLASQWFI Trigger: AATGAACCACTGGCTCGCCAACGTGACAGTCATCAATCGATTATTGTTGTTTTGTCCCAGATTTGTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| CDS-3UTR TCA 90 bp | AGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGCATGGAGTTGTGCTTGCCTaGTTTCATCATTATAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGCFNKVALSSIHSDFKHGVVLA*FHHYSQ Trigger: CTGACTATAATGATGAAATCAGGCAAGCACAACTCC...ATGCTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
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| CDS-3UTR TCA 90 bp | AAAAACACAAATCTGGGACAAAACAACAATAATCGATTGATGACTGTCACGTTGAGGAGCCTTATGTCTTaGGTTAGTCCATTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KNTNLGQNNNNRLMTVTLRSLMS*VSPFLL Trigger: CAAGAGGAATGGACTAACTCAAGACATAAGGCTCCT...CAACGTGACAGTCATCAATCGATTATTGTTGTTTTGTCCCAGATTTGTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| CDS-3UTR CCA 90 bp | AATTTTACATGTCCTTCTTCTCCCTGTCAAGTGGATGCTTCAACAAAGTGGCTTAAATATGTTAACTCCTaGAGTTGTGCTTGCCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: NFTCPSSPCQVDASTKWLKYVNS*SCACLI Trigger: AATCAGGCAAGCACAACTCCAGGAGTTAACATATTT...AAGCCACTTTGTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCAAGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAATATGTTAACTCCTaGAGTTGTGCTTGCCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LSSGCFNKVALSSIHSDFKYVNS*SCACLI Trigger: AATCAGGCAAGCACAACTCCAGGAGTTAACATATTT...AAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACTTGACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| 3UTR CAA 72 bp | GATGTATTACACACGACTAGTTATGAGGTTTTACAGTaGTTTAACAGGGAAGAATTGGCCCCAATTAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: DVLHTTSYEVLQ*FNREELAPIKL Trigger: CAGTTTAATTGGGGCCAATTCTTCCCTGTTAAACAACTGTAAAACCTCATAACTAGTCGTGTGTAATACATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229234.2 |
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| CDS-3UTR TCA 90 bp | TCAAGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGGACATCTGCATTTTCTaGACCTCCATTCAAATATGT | + |
|
Preference number: 4 (lower is better) Translates to: SSGCFNKVALSSIHSDFKDICIF*TSIQIC Trigger: ACATATTTGAATGGAGGTTCAGAAAATGCAGATGTC...CTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| CDS-3UTR TCA 90 bp | AGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGCATGACATCTGCATTTTCTaGACCTCCATTCAAATATGT | + |
|
Preference number: 4 (lower is better) Translates to: SGCFNKVALSSIHSDFKHDICIF*TSIQIC Trigger: ACATATTTGAATGGAGGTTCAGAAAATGCAGATGTC...ATGCTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| CDS CCA 90 bp | GACACCTCTTGCTCTGGGAGTGAGAAGGCCTCTTCCCCGGCTCACTaGCCCTCGGGTGGAAAGGACTCCTCGGGGAGTCGGTGTCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: DTSCSGSEKASSPAH*PSGGKDSSGSRCPT Trigger: CGTGGGACACCGACTCCCCGAGGAGTCCTTTCCACCCGAGGGCCAGTGAGCCGGGGAAGAGGCCTTCTCACTCCCAGAGCAAGAGGTGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230847.2 |
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| CDS CCA 90 bp | TGGCCCTCGGGTGGAAAGGACTCCTCGGGGAGTCGGTGTCCCACGTaGTACCCCAACTGCAACAGGCCTGGCTGTGACTCCTCCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WPSGGKDSSGSRCPT*YPNCNRPGCDSSSS Trigger: GGAAGAGGAGGAGTCACAGCCAGGCCTGTTGCAGTTGGGGTACCACGTGGGACACCGACTCCCCGAGGAGTCCTTTCCACCCGAGGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230847.2 |
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| CDS TCA 90 bp | TCTGTAGACGCCCTTCGCCGTCCTCGCCGAAGGAGCCTTATGTCTTaGGTTAGTCCATTCCTCTTGCCCATAGGAGTCATAAGCGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVDALRRPRRRSLMS*VSPFLLPIGVISVL Trigger: GAGGACGCTTATGACTCCTATGGGCAAGAGGAATGGACTAACTCAAGACATAAGGCTCCTTCGGCGAGGACGGCGAAGGGCGTCTACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230847.2 |
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| CDS TCA 90 bp | GCTTCAGGGAATTGCCACGCGGACCCAAAAGCTTCCCCACAAAGTTaGACTTGGGAAACTGCTTCACGGGAATCAGCACCTTCTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASGNCHADPKASPQS*TWETASRESAPSVP Trigger: TGGGACAGAAGGTGCTGATTCCCGTGAAGCAGTTTCCCAAGTTCAACTTTGTGGGGAAGCTTTTGGGTCCGCGTGGCAATTCCCTGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230073.2 |
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| CDS-3UTR CAA 90 bp | GGTCCTTTGTCTGCTCTAAGTCACTTGGAGCTCTCTGACAGTCCAAGGTGGTCGTCAGCTCTTCCTCCTTaGCCTTGTCTCTCATGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GPLSALSHLELSDSPRWSSALPP*PCLSWN Trigger: GTTCCATGAGAGACAAGGCAAAGGAGGAAGAGCTGA...CGACCACCTTGGACTGTCAGAGAGCTCCAAGTGACTTAGAGCAGACAAAGGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| CDS GCA 90 bp | CTCGCTGAGTCCATGCCCATAATCGTAGTAATCAGCTGCACTTTGTaGTGGGGTGCTGTAGCTGTTGTCATAGGAGTCATAGCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LAESMPIIVVISCTL*WGAVAVVIGVIALL Trigger: GAGCAGAGCTATGACTCCTATGACAACAGCTACAGCACCCCAGCACAAAGTGCAGCTGATTACTACGATTATGGGCATGGACTCAGCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230847.2 |
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| CDS-3UTR CAA 90 bp | AATCGATTGATGACTGTCACGTTGGCGAGCCAGTGGTTCATTTGCCGAGTAGGCTCAGCTCTTCCTCCTTaGCCTTGTCTCTCATGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NRLMTVTLASQWFICRVGSALPP*PCLSWN Trigger: GTTCCATGAGAGACAAGGCAAAGGAGGAAGAGCTGA...GCCTACTCGGCAAATGAACCACTGGCTCGCCAACGTGACAGTCATCAATCGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| CDS CCA 90 bp | GCTGAGTCCATGCCCATAATCGTAGTAATCAGCTGCACTTTGTGCTaGGGTGCTGTAGCTGTTGTCATAGGAGTCATAGCTCTGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: AESMPIIVVISCTLC*GAVAVVIGVIALLI Trigger: GATGAGCAGAGCTATGACTCCTATGACAACAGCTACAGCACCCCAGCACAAAGTGCAGCTGATTACTACGATTATGGGCATGGACTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230847.2 |
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| CDS GCA 90 bp | GTCCATGCCCATAATCGTAGTAATCAGCTGCACTTTGTGCTGGGGTaGTGTAGCTGTTGTCATAGGAGTCATAGCTCTGCTCATCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: VHAHNRSNQLHFVLG*CSCCHRSHSSAHHR Trigger: CCTATGATGAGCAGAGCTATGACTCCTATGACAACAGCTACAGCACCCCAGCACAAAGTGCAGCTGATTACTACGATTATGGGCATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230847.2 |
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| CDS-3UTR CAA 90 bp | AATCGATTGATGACTGTCACGTTGGCGAGCCAGTGGTTCATTTGCCGAGTAGGCCTCCTGGAGTTGTGCTaGCCTGATTTCATCATTATA | + |
|
Preference number: 5 (lower is better) Translates to: NRLMTVTLASQWFICRVGLLELC*PDFIII Trigger: TATAATGATGAAATCAGGCAAGCACAACTCCAGGAG...GCCTACTCGGCAAATGAACCACTGGCTCGCCAACGTGACAGTCATCAATCGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
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| CDS-3UTR CAA 90 bp | CACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGACCCACAAAGTTGAACTaGGGAAACTGCTTCACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HIVCTCNRLPFYASWQERPTKLN*GNCFTG Trigger: TCCCGTGAAGCAGTTTCCCAAGTTCAACTTTGTGGG...TCTTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
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| CDS-3UTR CAA 90 bp | CTGTCAAGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGCGCTTCAGGGAATaGCCACGCGGACCCAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSGCFNKVALSSIHSDFKRFRE*PRGPKS Trigger: GCTTTTGGGTCCGCGTGGCAATTCCCTGAAGCGCTT...AAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACTTGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
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| CDS-3UTR CAA 90 bp | ACCACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAATCAGCTCTTCCTCCTTaGCCTTGTCTCTCATGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TTLSALVIGSLFTQVGKKSALPP*PCLSWN Trigger: GTTCCATGAGAGACAAGGCAAAGGAGGAAGAGCTGA...TTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGAAGCGCTTCAGGGAATaGCCACGCGGACCCAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSGCFNKVALSSIHSDFKKRFRE*PRGPKS Trigger: GCTTTTGGGTCCGCGTGGCAATTCCCTGAAGCGCTT...CTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 |
||
| CDS GCA 90 bp | TTTTCCTCAGCTCTTCCTCCTTTGCCTTGTCTCTCATGGAACCTTTaGCAAGGATGGACATTTTTGTCAACGTTTCTTCTTGTAAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSSALPPLPCLSWNL*QGWTFLSTFLLVSA Trigger: AGCGCTTACAAGAAGAAACGTTGACAAAAATGTCCATCCTTGGCAAAGGTTCCATGAGAGACAAGGCAAAGGAGGAAGAGCTGAGGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230073.2 |
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| CDS-3UTR CAA 90 bp | CACATTGTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGACCCAGCTTCATGTTCTaGTTTATCACCACGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: HIVCTCNRLPFYASWQERPSFMF*FITTSM Trigger: CATTGACGTGGTGATAAACAAGAACATGAAGCTGGG...TCTTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGACAATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CAA 90 bp | AAAAACACAAATCTGGGACAAAACAACAATAATCGATTGATGACTGTCACGTTGAAGCGCTTCAGGGAATaGCCACGCGGACCCAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KNTNLGQNNNNRLMTVTLKRFRE*PRGPKS Trigger: GCTTTTGGGTCCGCGTGGCAATTCCCTGAAGCGCTT...CAACGTGACAGTCATCAATCGATTATTGTTGTTTTGTCCCAGATTTGTGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000229234.2 ENSMUST00000229683.2 |
||
| CDS-3UTR CAA 90 bp | GTCGACATTTCTTTGAACAGTATACAGGACGGTGGAGATTGGCTATTTCACAACCCCAGCTTCATGTTCTaGTTTATCACCACGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VDISLNSIQDGGDWLFHNPSFMF*FITTSM Trigger: CATTGACGTGGTGATAAACAAGAACATGAAGCTGGG...GTTGTGAAATAGCCAATCTCCACCGTCCTGTATACTGTTCAAAGAAATGTCGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229683.2 |
||
| CDS TCA 90 bp | CTGAACCTCCATTCAAATATGTTAACTCCTGGAGTTGTGCTTGCCTaGTTTCATCATTATAGTCCTTGGGAAACTGCTTCACGGGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: LNLHSNMLTPGVVLA*FHHYSPWETASRES Trigger: TGATTCCCGTGAAGCAGTTTCCCAAGGACTATAATGATGAAATCAGGCAAGCACAACTCCAGGAGTTAACATATTTGAATGGAGGTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230847.2 |
||
| CDS-3UTR CAA 90 bp | AAAATTTTACATGTCCTTCTTCTCCCTGTCAAGTGGATGCTTCAACAAAGTGGCCCCAGCTTCATGTTCTaGTTTATCACCACGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: KILHVLLLPVKWMLQQSGPSFMF*FITTSM Trigger: CATTGACGTGGTGATAAACAAGAACATGAAGCTGGG...GCCACTTTGTTGAAGCATCCACTTGACAGGGAGAAGAAGGACATGTAAAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGCACTTGTAATCGGCTCCCTTTTTACGCAAGTTGGCAAGAAAGAAAGAAACTCCTGGAGTTGTGCTaGCCTGATTTCATCATTATA | + |
|
Preference number: 5 (lower is better) Translates to: VCTCNRLPFYASWQERKKLLELC*PDFIII Trigger: TATAATGATGAAATCAGGCAAGCACAACTCCAGGAG...TTTCTTTCTTTCTTGCCAACTTGCGTAAAAAGGGAGCCGATTACAAGTGCAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTAAGCATCCCAGCTTCATGTTCTaGTTTATCACCACGTCAATG | + |
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Preference number: 5 (lower is better) Translates to: SGCFNKVALSSIHSDFKHPSFMF*FITTSM Trigger: CATTGACGTGGTGATAAACAAGAACATGAAGCTGGG...ATGCTTAAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| CDS-3UTR CAA 90 bp | CTGTCAAGTGGATGCTTCAACAAAGTGGCTTTAAGTTCCATCCATTCAGATTTTCTCCTGGAGTTGTGCTaGCCTGATTTCATCATTATA | + |
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Preference number: 5 (lower is better) Translates to: LSSGCFNKVALSSIHSDFLLELC*PDFIII Trigger: TATAATGATGAAATCAGGCAAGCACAACTCCAGGAG...AAAATCTGAATGGATGGAACTTAAAGCCACTTTGTTGAAGCATCCACTTGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000230847.2 |
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| CDS CCA 72 bp | TGCTCTGGGAGTGAGAAGGCCTCTTCCCCGGCTCACTaGCCCTCGGGTGGAAAGGACTCCTCGGGGAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: CSGSEKASSPAH*PSGGKDSSGSR Trigger: CCGACTCCCCGAGGAGTCCTTTCCACCCGAGGGCCAGTGAGCCGGGGAAGAGGCCTTCTCACTCCCAGAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230847.2 |
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| CDS CCA 72 bp | GGTGGAAAGGACTCCTCGGGGAGTCGGTGTCCCACGTaGTACCCCAACTGCAACAGGCCTGGCTGTGACTCC | + |
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Preference number: 6 (lower is better) Translates to: GGKDSSGSRCPT*YPNCNRPGCDS Trigger: GGAGTCACAGCCAGGCCTGTTGCAGTTGGGGTACCACGTGGGACACCGACTCCCCGAGGAGTCCTTTCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230847.2 |
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| CDS GCA 72 bp | GGCGTGCCCCATCCGGGCATATGCTTCTGCTGGGGGTaGGAACACTTCAATGAGCACGTGCAGGTCGTCATT | + |
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Preference number: 6 (lower is better) Translates to: GVPHPGICFCWG*EHFNEHVQVVI Trigger: AATGACGACCTGCACGTGCTCATTGAAGTGTTCGCACCCCCAGCAGAAGCATATGCCCGGATGGGGCACGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230073.2 |
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| CDS CCA 72 bp | TTCCAAGGCGTGCCCCATCCGGGCATATGCTTCTGCTaGGGGTGCGAACACTTCAATGAGCACGTGCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: FQGVPHPGICFC*GCEHFNEHVQV Trigger: GACCTGCACGTGCTCATTGAAGTGTTCGCACCCCCAGCAGAAGCATATGCCCGGATGGGGCACGCCTTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230073.2 |
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| CDS GCA 72 bp | TCAGGGATCAGGAATTTCTTGATCTCTTCCAAGGCGTaGCCCATCCGGGCATATGCTTCTGCTGGGGGTGCG | + |
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Preference number: 6 (lower is better) Translates to: SGIRNFLISSKA*PIRAYASAGGA Trigger: CGCACCCCCAGCAGAAGCATATGCCCGGATGGGGCACGCCTTGGAAGAGATCAAGAAATTCCTGATCCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230073.2 |
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| CDS GCA 72 bp | AGGCCTGGCTGTGACTCCTCCTCTTCCCCTGGTTATTaGTGGTGTAGTTACACCTCTCGTACGCAAAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RPGCDSSSSPGY*WCSYTSRTQSR Trigger: TCTACTTTGCGTACGAGAGGTGTAACTACACCAGCAATAACCAGGGGAAGAGGAGGAGTCACAGCCAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230847.2 |
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| CDS CAA 72 bp | CCACGCGGACCCAAAAGCTTCCCCACAAAGTTGAACTaGGGAAACTGCTTCACGGGAATCAGCACCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: PRGPKSFPTKLN*GNCFTGISTFC Trigger: ACAGAAGGTGCTGATTCCCGTGAAGCAGTTTCCCAAGTTCAACTTTGTGGGGAAGCTTTTGGGTCCGCGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230073.2 |
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| CDS TCA 72 bp | AATTGCCACGCGGACCCAAAAGCTTCCCCACAAAGTTaGACTTGGGAAACTGCTTCACGGGAATCAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: NCHADPKASPQS*TWETASRESAP Trigger: AGGTGCTGATTCCCGTGAAGCAGTTTCCCAAGTTCAACTTTGTGGGGAAGCTTTTGGGTCCGCGTGGCAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230073.2 |
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| CDS CAA 72 bp | TTTGTCAACGTTTCTTCTTGTAAGCGCTTCAGGGAATaGCCACGCGGACCCAAAAGCTTCCCCACAAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: FVNVSSCKRFRE*PRGPKSFPTKL Trigger: CAACTTTGTGGGGAAGCTTTTGGGTCCGCGTGGCAATTCCCTGAAGCGCTTACAAGAAGAAACGTTGACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230073.2 |
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| CDS GCA 72 bp | TCCATGCCCATAATCGTAGTAATCAGCTGCACTTTGTaGTGGGGTGCTGTAGCTGTTGTCATAGGAGTCATA | + |
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Preference number: 6 (lower is better) Translates to: SMPIIVVISCTL*WGAVAVVIGVI Trigger: TATGACTCCTATGACAACAGCTACAGCACCCCAGCACAAAGTGCAGCTGATTACTACGATTATGGGCATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230847.2 |
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| CDS CCA 72 bp | ATGCCCATAATCGTAGTAATCAGCTGCACTTTGTGCTaGGGTGCTGTAGCTGTTGTCATAGGAGTCATAGCT | + |
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Preference number: 6 (lower is better) Translates to: MPIIVVISCTLC*GAVAVVIGVIA Trigger: AGCTATGACTCCTATGACAACAGCTACAGCACCCCAGCACAAAGTGCAGCTGATTACTACGATTATGGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230847.2 |
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| CDS CAA 90 bp | CTTTTCCTCAGCTCTTCCTCCTTTGCCTTGTCTCTCATGGAACCTTaGCCAAGGATGGACATTTTTGTCAACGTTTCTTCTTGTAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: LFLSSSSFALSLMEP*PRMDIFVNVSSCKR Trigger: GCGCTTACAAGAAGAAACGTTGACAAAAATGTCCATCCTTGGCAAAGGTTCCATGAGAGACAAGGCAAAGGAGGAAGAGCTGAGGAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230073.2 |
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| CDS TCA 72 bp | CATTCAAATATGTTAACTCCTGGAGTTGTGCTTGCCTaGTTTCATCATTATAGTCCTTGGGAAACTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: HSNMLTPGVVLA*FHHYSPWETAS Trigger: TGAAGCAGTTTCCCAAGGACTATAATGATGAAATCAGGCAAGCACAACTCCAGGAGTTAACATATTTGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230847.2 |
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| CDS TCA 72 bp | CATTCAAATATGTTAACTCCTGGAGTTGTGCTTGCCTaGTTTCATCATTATAGTCAGGGATCAGGAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: HSNMLTPGVVLA*FHHYSQGSGIS Trigger: AGAAATTCCTGATCCCTGACTATAATGATGAAATCAGGCAAGCACAACTCCAGGAGTTAACATATTTGAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022954.7 ENSMUST00000229234.2 ENSMUST00000229683.2 ENSMUST00000230073.2 |
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