Pregenerated sensors for KHDRBS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026058Ensembl transcript IDs: ENSMUST00000027226.12, ENSMUST00000185666.2, ENSMUST00000188257.7, ENSMUST00000189878.2
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCAAATTGGAGAAGACTGGCTTCCACAGAGCCAGGAAGAGATTCTaGAAGCTCACATCCACAGTGATACACTTCCTCCAACAAGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: GKLEKTGFHRARKRF*KLTSTVIHFLQQGH Trigger: GTGGCCTTGTTGGAGGAAGTGTATCACTGTGGATGTGAGCTTTCAGAATCTCTTCCTGGCTCTGTGGAAGCCAGTCTTCTCCAATTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR CCA 90 bp | GAGCTGGAGGAGCTGAGAGTTCTACATCTTGTTCCTAAGGCAAATTaGAGAAGACTGGCTTCCACAGAGCCAGGAAGAGATTCTGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: ELEELRVLHLVPKAN*RRLASTEPGRDSES Trigger: GCTTTCAGAATCTCTTCCTGGCTCTGTGGAAGCCAGTCTTCTCCAATTTGCCTTAGGAACAAGATGTAGAACTCTCAGCTCCTCCAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR TCA 90 bp | AGAGCATATTTGCAGAGAGTGGGGAGTGGTACCGAGAGGAATACGTaGGAGTCAAGTGCAAAGCAGTTTGCAGTAAACGTTATCCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: RAYLQRVGSGTERNT*ESSAKQFAVNVIPV Trigger: AACTGGGATAACGTTTACTGCAAACTGCTTTGCACTTGACTCTCACGTATTCCTCTCGGTACCACTCCCCACTCTCTGCAAATATGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR TCA 90 bp | GTCCCCAGACTGTATCAGTTCCTGCCTCCAGATTTCTGTCCAATTTaGGTCCCTGTTCTGACTTCCTTCAATGATGAACATGACTTGGAA | + |
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Preference number: 1 (lower is better) Translates to: VPRLYQFLPPDFCPI*VPVLTSFNDEHDLE Trigger: TTCCAAGTCATGTTCATCATTGAAGGAAGTCAGAACAGGGACTCAAATTGGACAGAAATCTGGAGGCAGGAACTGATACAGTCTGGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR TCA 90 bp | TTCTTCATGCCTTCTGCTTCAGTTCCTACTTCCAGGTTCCTTGGCTaGGTTCTATTAGAAAACAGGCTGAGCAAGTTAGACGGAACAAGC | + |
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Preference number: 1 (lower is better) Translates to: FFMPSASVPTSRFLG*VLLENRLSKLDGTS Trigger: GCTTGTTCCGTCTAACTTGCTCAGCCTGTTTTCTAATAGAACTCAGCCAAGGAACCTGGAAGTAGGAACTGAAGCAGAAGGCATGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR TCA 90 bp | GCACTTCCACAGACTGGTCTGGAAAACATTTTCTTGATTAGTGATTaGTGTGTGGTGGGAGGATCCAGCTCACTATGGGTGGTACTACTA | + |
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Preference number: 1 (lower is better) Translates to: ALPQTGLENIFLISD*CVVGGSSSLWVVLL Trigger: TAGTAGTACCACCCATAGTGAGCTGGATCCTCCCACCACACATCAATCACTAATCAAGAAAATGTTTTCCAGACCAGTCTGTGGAAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR GCA 90 bp | GTGTACCCTTTCTGTTCTCTACAAAAACAAGAATGTGTGTGCATGTaGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: VYPFCSLQKQECVCM*VCVCVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACACACACACGCACATGCACACACATTCTTGTTTTTGTAGAGAACAGAAAGGGTACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR GCA 90 bp | CTAATGGTGTACCCTTTCTGTTCTCTACAAAAACAAGAATGTGTGTaGATGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: LMVYPFCSLQKQECV*MCVCVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACACGCACATGCACACACATTCTTGTTTTTGTAGAGAACAGAAAGGGTACACCATTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR GCA 90 bp | GGGGAAGTTGACCAAAGTTTGGTTAACCATGGTTTATCATTCACATaGATGCACAAATGTCTCCCCTCAACACACACACATACACACACA | + |
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Preference number: 1 (lower is better) Translates to: GEVDQSLVNHGLSFT*MHKCLPSTHTHTHT Trigger: TGTGTGTGTATGTGTGTGTGTTGAGGGGAGACATTTGTGCATGCATGTGAATGATAAACCATGGTTAACCAAACTTTGGTCAACTTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR CCA 90 bp | CATTGCCCTCTGCACCCTTTCTCTCAATTCTTTGTGTTTCATGGTTaGTTCTTGATACCTGGCAATTATCTTTATCCCTGTGGCAAATCA | + |
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Preference number: 1 (lower is better) Translates to: HCPLHPFSQFFVFHG*FLIPGNYLYPCGKS Trigger: TGATTTGCCACAGGGATAAAGATAATTGCCAGGTATCAAGAACCAACCATGAAACACAAAGAATTGAGAGAAAGGGTGCAGAGGGCAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR TCA 90 bp | ATTACCACAAAAACAGTCTCTAGGCCACATACTAACATTCTCCTTTaGAACCTTTTAAGACAGGTCTCCACAGTTCAAATGACCCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: ITTKTVSRPHTNILL*NLLRQVSTVQMTLS Trigger: GCTGAGGGTCATTTGAACTGTGGAGACCTGTCTTAAAAGGTTTCAAAGGAGAATGTTAGTATGTGGCCTAGAGACTGTTTTTGTGGTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR TCA 90 bp | CTCTGCACCCTTTCTCTCAATTCTTTGTGTTTCATGGTTGGTTCTTaGTACCTGGCAATTATCTTTATCCCTGTGGCAAATCACTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: LCTLSLNSLCFMVGS*YLAIIFIPVANHCF Trigger: AAAGCAGTGATTTGCCACAGGGATAAAGATAATTGCCAGGTATCAAGAACCAACCATGAAACACAAAGAATTGAGAGAAAGGGTGCAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR GCA 90 bp | AAGTTGACCAAAGTTTGGTTAACCATGGTTTATCATTCACATGCATaGACAAATGTCTCCCCTCAACACACACACATACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: KLTKVWLTMVYHSHA*TNVSPQHTHIHTHT Trigger: TGTGTGTGTGTGTATGTGTGTGTGTTGAGGGGAGACATTTGTGCATGCATGTGAATGATAAACCATGGTTAACCAAACTTTGGTCAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR TCA 90 bp | TTAGGATTCCTCATGAATACATCTCCACAAACCCTGAATTCTAACTaGACAATTTCTACCAGTTTAGAAAGTGAGGAGCAAAGTGGTTCA | + |
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Preference number: 1 (lower is better) Translates to: LGFLMNTSPQTLNSN*TISTSLESEEQSGS Trigger: TGAACCACTTTGCTCCTCACTTTCTAAACTGGTAGAAATTGTTCAGTTAGAATTCAGGGTTTGTGGAGATGTATTCATGAGGAATCCTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR CCA 90 bp | AATGCCTTCAGGTCTCTGAAGGTCTTCTATGTTGCCAACAACATTTaGCTAGAGGATACAGAGAAGCATTTAATTGTCATAATTTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: NAFRSLKVFYVANNI*LEDTEKHLIVIISE Trigger: TTCTGAAATTATGACAATTAAATGCTTCTCTGTATCCTCTAGCCAAATGTTGTTGGCAACATAGAAGACCTTCAGAGACCTGAAGGCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR GCA 90 bp | GTTAATTCCTCCTTAAAAGTCAACCATACCACTATCATAATCAATTaGTATGCAACACATCCCTTCATACACTTTTATAAGATCGCCCAA | + |
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Preference number: 1 (lower is better) Translates to: VNSSLKVNHTTIIIN*YATHPFIHFYKIAQ Trigger: TTGGGCGATCTTATAAAAGTGTATGAAGGGATGTGTTGCATAGCAATTGATTATGATAGTGGTATGGTTGACTTTTAAGGAGGAATTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR-3UTR CCA 90 bp | CTCATGTTCATCCTAGAACCATTGCCCTCTGCACCCTTTCTCTCAATTCTTTGTGGGTGGGAGATTGGCTaGGTGGGTGGAGGAACACCC | + |
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Preference number: 2 (lower is better) Translates to: LMFILEPLPSAPFLSILCGWEIG*VGGGTP Trigger: GGGTGTTCCTCCACCCACCCAGCCAATCTCCCACCC...ACAAAGAATTGAGAGAAAGGGTGCAGAGGGCAATGGTTCTAGGATGAACATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR CCA 90 bp | CTCATGTTCATCCTAGAACCATTGCCCTCTGCACCCTTTCTCTCAATTCTTTGTGGGAGATTGGCTGGGTaGGTGGAGGAACACCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LMFILEPLPSAPFLSILCGRLAG*VEEHPP Trigger: AGGAGGGTGTTCCTCCACCCACCCAGCCAATCTCCC...ACAAAGAATTGAGAGAAAGGGTGCAGAGGGCAATGGTTCTAGGATGAACATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR TCA 90 bp | TCATGGTTGGTTCTTGATACCTGGCAATTATCTTTATCCCTGTGGCAAATCACTCCAACCAGACCCCCTTaGGGTCCCAGGGACGAAACC | + |
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Preference number: 2 (lower is better) Translates to: SWLVLDTWQLSLSLWQITPTRPP*GPRDET Trigger: GGTTTCGTCCCTGGGACCTCAAGGGGGTCTGGTTGG...AGTGATTTGCCACAGGGATAAAGATAATTGCCAGGTATCAAGAACCAACCATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR CCA 90 bp | CATTTTAAAAGTCAGGAAGAGATGGCATGGAGGTCCCTAATGTGCAATGCTAATCTCGCTGCCAACCATTaGACTGAGCATGGGGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: HFKSQEEMAWRSLMCNANLAANH*TEHGVP Trigger: GGGGACCCCATGCTCAGTCCAATGGTTGGCAGCGAG...ATTAGCATTGCACATTAGGGACCTCCATGCCATCTCTTCCTGACTTTTAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGCCTTGGAAATTATCTAACGAGAAGCAGAGCATATTTGCAGAGAGTGGGAGAGGATGTCCTTGTTaGGCATCAATGGGAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: ERPWKLSNEKQSIFAESGRGCPC*ASMGGE Trigger: CTCTCCTCCCATTGATGCTCAACAAGGACATCCTCT...CCCACTCTCTGCAAATATGCTCTGCTTCTCGTTAGATAATTTCCAAGGCCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR GCA 90 bp | GAAGTTGACCAAAGTTTGGTTAACCATGGTTTATCATTCACATGCATGCACAAACCCAGTGTAGGGGAATaGCAGGGTGGAGAGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: EVDQSLVNHGLSFTCMHKPSVGE*QGGEAG Trigger: TCCTGCCTCTCCACCCTGGCATTCCCCTACACTGGG...TTTGTGCATGCATGTGAATGATAAACCATGGTTAACCAAACTTTGGTCAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR CCA 90 bp | GAAGTTGACCAAAGTTTGGTTAACCATGGTTTATCATTCACATGCATGCACAAAGCAGGAGTGGGTGAGTaGGTGGGTGGGAGATTGGCT | + |
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Preference number: 2 (lower is better) Translates to: EVDQSLVNHGLSFTCMHKAGVGE*VGGRLA Trigger: AGCCAATCTCCCACCCACCCACTCACCCACTCCTGC...TTTGTGCATGCATGTGAATGATAAACCATGGTTAACCAAACTTTGGTCAACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR CCA 90 bp | CTCATGTTCATCCTAGAACCATTGCCCTCTGCACCCTTTCTCTCAATTCTTTGTAAACAAGTACCAAAATaGAGAACCGTCCCACCGAGC | + |
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Preference number: 2 (lower is better) Translates to: LMFILEPLPSAPFLSILCKQVPK*RTVPPS Trigger: GCTCGGTGGGACGGTTCTCCATTTTGGTACTTGTTT...ACAAAGAATTGAGAGAAAGGGTGCAGAGGGCAATGGTTCTAGGATGAACATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR TCA 90 bp | TTCAGGTCTCTGAAGGTCTTCTATGTTGCCAACAACATTTGGCTAGAGGATACAAATTGGGCAAATTGGTaGGTCACTGTCATGGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: FRSLKVFYVANNIWLEDTNWANW*VTVMVP Trigger: AGGCACCATGACAGTGACTCACCAATTTGCCCAATT...TGTATCCTCTAGCCAAATGTTGTTGGCAACATAGAAGACCTTCAGAGACCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAGAGATTCTGAAAGCTCACATCCACAGTGATACACTTCCTCCAACAAGGATATCAATTGCCCAGTaGTTACCTAATGGTGTACCC | + |
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Preference number: 2 (lower is better) Translates to: QEEILKAHIHSDTLPPTRISIAQ*LPNGVP Trigger: GGGTACACCATTAGGTAATCACTGGGCAATTGATAT...CCTTGTTGGAGGAAGTGTATCACTGTGGATGTGAGCTTTCAGAATCTCTTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTTAAAAGTCAGGAAGAGATGGCATGGAGGTCCCTAATGTGCAATGCTAATGACATGTGCCTGATATaGCTGTCACCTGAGAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: HFKSQEEMAWRSLMCNANDMCLI*LSPERL Trigger: TAGCCTCTCAGGTGACAGCCATATCAGGCACATGTC...ATTAGCATTGCACATTAGGGACCTCCATGCCATCTCTTCCTGACTTTTAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR TCA 90 bp | CATCTTGTTCCTAAGGCAAATTGGAGAAGACTGGCTTCCACAGAGCCAGGAAGACAACACATAAAAGTTTaGTGCTGTACGATATTCCTG | + |
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Preference number: 2 (lower is better) Translates to: HLVPKANWRRLASTEPGRQHIKV*CCTIFL Trigger: CAGGAATATCGTACAGCATCAAACTTTTATGTGTTG...TCTTCCTGGCTCTGTGGAAGCCAGTCTTCTCCAATTTGCCTTAGGAACAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR-3UTR TCA 90 bp | CATCTTGTTCCTAAGGCAAATTGGAGAAGACTGGCTTCCACAGAGCCAGGAAGAGAGTTCTCATCTGTGTaGTCAATAAATGGAATTGAC | + |
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Preference number: 2 (lower is better) Translates to: HLVPKANWRRLASTEPGREFSSV*SINGID Trigger: GTCAATTCCATTTATTGATCACACAGATGAGAACTC...TCTTCCTGGCTCTGTGGAAGCCAGTCTTCTCCAATTTGCCTTAGGAACAAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCATGGTTGGTTCTTGATACCTGGCAATTATCTTTATCCCTGTGGCAAATCAACAGGAGGAACAATATaGACCAACCAGACCCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: FHGWFLIPGNYLYPCGKSTGGTI*TNQTPL Trigger: CAAGGGGGTCTGGTTGGTTCATATTGTTCCTCCTGT...TGATTTGCCACAGGGATAAAGATAATTGCCAGGTATCAAGAACCAACCATGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAGAGATTCTGAAAGCTCACATCCACAGTGATACACTTCCTCCAACAAGGGAAGGTCTTCTATGTTaGCAACAACATTTGGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: QEEILKAHIHSDTLPPTREGLLC*QQHLAR Trigger: TCTAGCCAAATGTTGTTGGCAACATAGAAGACCTTC...CCTTGTTGGAGGAAGTGTATCACTGTGGATGTGAGCTTTCAGAATCTCTTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACACAAGGGGAAGTTGACCAAAGTTTGGTTAACCATGGTTTATCATTCACAAACCTTTGCCCCACCTaGGGATCCATCACATTTATG | + |
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Preference number: 2 (lower is better) Translates to: RTQGEVDQSLVNHGLSFTNLCPT*GSITFM Trigger: CATAAATGTGATGGATCCCCAGGTGGGGCAAAGGTT...TGTGAATGATAAACCATGGTTAACCAAACTTTGGTCAACTTCCCCTTGTGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR CAA 90 bp | CCTCTGCACCCTTTCTCTCAATTCTTTGTGTTTCATGGTTGGTTCTaGATACCTGGCAATTATCTTTATCCCTGTGGCAAATCACTGCTT | + |
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Preference number: 2 (lower is better) Translates to: PLHPFSQFFVFHGWF*IPGNYLYPCGKSLL Trigger: AAGCAGTGATTTGCCACAGGGATAAAGATAATTGCCAGGTATCAAGAACCAACCATGAAACACAAAGAATTGAGAGAAAGGGTGCAGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR TCA 90 bp | GTACCAACTTCTGTCTTAGGTAGGGTTTTCATTGCTGTGAAGAGACACCATGGCGATGGGAGGTTTTTCTaGAGCATAAATTGTCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: VPTSVLGRVFIAVKRHHGDGRFF*SINCQK Trigger: CTTTTGACAATTTATGCTTCAGAAAAACCTCCCATC...GCCATGGTGTCTCTTCACAGCAATGAAAACCCTACCTAAGACAGAAGTTGGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR-3UTR TCA 90 bp | AAATACAGTTTGTCCGAAAGATGCAACTGCACCCATTCCACTGCTTACCAAATTATCCAAGTGAAATACTaGAGAGGATCCAAGGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: KYSLSERCNCTHSTAYQIIQVKY*RGSKEQ Trigger: TTGCTCCTTGGATCCTCTTCAGTATTTCACTTGGAT...AATTTGGTAAGCAGTGGAATGGGTGCAGTTGCATCTTTCGGACAAACTGTATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR TCA 90 bp | CATTTTAAAAGTCAGGAAGAGATGGCATGGAGGTCCCTAATGTGCAATGCTAATTACCAGTTTAGAAAGTaGGGAGCAAAGTGGTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: HFKSQEEMAWRSLMCNANYQFRK*GAKWFR Trigger: TCTGAACCACTTTGCTCCTCACTTTCTAAACTGGTA...ATTAGCATTGCACATTAGGGACCTCCATGCCATCTCTTCCTGACTTTTAAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR TCA 90 bp | CTCATGTTCATCCTAGAACCATTGCCCTCTGCACCCTTTCTCTCAATTCTTTGTCAATTTGGTACTTTATaGACAGCACAATGCTCAACT | + |
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Preference number: 2 (lower is better) Translates to: LMFILEPLPSAPFLSILCQFGTL*TAQCST Trigger: AGTTGAGCATTGTGCTGTTCATAAAGTACCAAATTG...ACAAAGAATTGAGAGAAAGGGTGCAGAGGGCAATGGTTCTAGGATGAACATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGCCTTGGAAATTATCTAACGAGAAGCAGAGCATATTTGCAGAGAGTGGGTTTGTGTTTCATGGTTaGTTCTTGATACCTGGCAAT | + |
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Preference number: 2 (lower is better) Translates to: ERPWKLSNEKQSIFAESGFVFHG*FLIPGN Trigger: ATTGCCAGGTATCAAGAACCAACCATGAAACACAAA...CCCACTCTCTGCAAATATGCTCTGCTTCTCGTTAGATAATTTCCAAGGCCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR CAA 90 bp | AACATAATGCCTTTCACTGTCCTTCCCATTTTCCTGCCCTTATCATaGCTCTGCATTTGCATAGATTCAGATAGCAAAGCCTTACATGTT | + |
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Preference number: 2 (lower is better) Translates to: NIMPFTVLPIFLPLS*LCICIDSDSKALHV Trigger: AACATGTAAGGCTTTGCTATCTGAATCTATGCAAATGCAGAGCAATGATAAGGGCAGGAAAATGGGAAGGACAGTGAAAGGCATTATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR-3UTR GCA 90 bp | TCAATTGCTATGCAACACATCCCTTCATACACTTTTATAAGATCGCCCAAGTCGGAGTCACTGTCATGGTaGCTACATGATAAAAACATG | + |
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Preference number: 2 (lower is better) Translates to: SIAMQHIPSYTFIRSPKSESLSW*LHDKNM Trigger: CATGTTTTTATCATGTAGGCACCATGACAGTGACTC...CGACTTGGGCGATCTTATAAAAGTGTATGAAGGGATGTGTTGCATAGCAATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTACCAAATTATTTCTTAGGATTCCTCATGAATACATCTCCACAAACCCTGGGATCCAAGGAGCAATaGATGGCATTATGTGGTAGT | + |
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Preference number: 2 (lower is better) Translates to: CLPNYFLGFLMNTSPQTLGSKEQ*MALCGS Trigger: ACTACCACATAATGCCATCCATTGCTCCTTGGATCC...CAGGGTTTGTGGAGATGTATTCATGAGGAATCCTAAGAAATAATTTGGTAAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR TCA 90 bp | TGTTGCCAACAACATTTGGCTAGAGGATACAGAGAAGCATTTAATTGTCATAATTTCAGAAACCCAGTCTaGCAAGTGTCATACCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: CCQQHLARGYREAFNCHNFRNPV*QVSYQE Trigger: CTCTTGGTATGACACTTGTCAGACTGGGTTTCTGAA...ATTATGACAATTAAATGCTTCTCTGTATCCTCTAGCCAAATGTTGTTGGCAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTTAAAAGTCAGGAAGAGATGGCATGGAGGTCCCTAATGTGCAATGCTAATCATCTCCACAAACCCTaGATTCTAACTGAACAATTT | + |
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Preference number: 2 (lower is better) Translates to: HFKSQEEMAWRSLMCNANHLHKP*ILTEQF Trigger: AAATTGTTCAGTTAGAATTCAGGGTTTGTGGAGATG...ATTAGCATTGCACATTAGGGACCTCCATGCCATCTCTTCCTGACTTTTAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| 3UTR-3UTR CCA 90 bp | CACCATGGCCAAGGCAACTCTTATAAAGGACAAAATTTAATTGGGGCTGGCTTAAAATGCAGATTTCACTaGAACATAATGCCTTTCACT | + |
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Preference number: 2 (lower is better) Translates to: HHGQGNSYKGQNLIGAGLKCRFH*NIMPFT Trigger: AGTGAAAGGCATTATGTTCCAGTGAAATCTGCATTT...TAAGCCAGCCCCAATTAAATTTTGTCCTTTATAAGAGTTGCCTTGGCCATGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR-3UTR CCA 90 bp | CACCATGGCCAAGGCAACTCTTATAAAGGACAAAATTTAATTGGGGCTGGCTTAACTGAAATATTAAAATaGTTGGCAGGCTATTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: HHGQGNSYKGQNLIGAGLTEILK*LAGYSA Trigger: TGCTGAATAGCCTGCCAACCATTTTAATATTTCAGT...TAAGCCAGCCCCAATTAAATTTTGTCCTTTATAAGAGTTGCCTTGGCCATGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGTTGACCAAAGTTTGGTTAACCATGGTTTATCATTCACATGCATGCACAAAAGGCCAATTCCATTCTaGGAGAGTGAAGACTTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: EVDQSLVNHGLSFTCMHKRPIPF*ESEDFN Trigger: ATTGAAGTCTTCACTCTCCCAGAATGGAATTGGCCT...TTTGTGCATGCATGTGAATGATAAACCATGGTTAACCAAACTTTGGTCAACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR CAA 90 bp | AAATGCCTTCAGGTCTCTGAAGGTCTTCTATGTTGCCAACAACATTaGGCTAGAGGATACAGAGAAGCATTTAATTGTCATAATTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: KCLQVSEGLLCCQQH*ARGYREAFNCHNFR Trigger: TCTGAAATTATGACAATTAAATGCTTCTCTGTATCCTCTAGCCAAATGTTGTTGGCAACATAGAAGACCTTCAGAGACCTGAAGGCATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR CAA 90 bp | TCCATGACTAAGCCAACTAGACAACCAGCAGTCAACAATGAAGCTTaGGATAAGAAGCATGTATATCACAGTGTATGTGATGAATGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: SMTKPTRQPAVNNEA*DKKHVYHSVCDECK Trigger: TTTACATTCATCACATACACTGTGATATACATGCTTCTTATCCAAAGCTTCATTGTTGACTGCTGGTTGTCTAGTTGGCTTAGTCATGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR-3UTR GCA 90 bp | TCAATTGCTATGCAACACATCCCTTCATACACTTTTATAAGATCGCCCAAGTCGTCATTGCTCTGCATTTaGATAGATTCAGATAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SIAMQHIPSYTFIRSPKSSLLCI*IDSDSK Trigger: TTTGCTATCTGAATCTATGCAAATGCAGAGCAATGA...CGACTTGGGCGATCTTATAAAAGTGTATGAAGGGATGTGTTGCATAGCAATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTTGACCAAAGTTTGGTTAACCATGGTTTATCATTCACATGCATGCACAAAGAAGGGCATCCAATTTaGTACTTTATGAACAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: EVDQSLVNHGLSFTCMHKEGHPI*YFMNST Trigger: TGTGCTGTTCATAAAGTACCAAATTGGATGCCCTTC...TTTGTGCATGCATGTGAATGATAAACCATGGTTAACCAAACTTTGGTCAACTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR-3UTR GCA 90 bp | TGTTGCCAACAACATTTGGCTAGAGGATACAGAGAAGCATTTAATTGTCATAATCATAATCAATTGCTATaGAACACATCCCTTCATACA | + |
|
Preference number: 2 (lower is better) Translates to: CCQQHLARGYREAFNCHNHNQLL*NTSLHT Trigger: TGTATGAAGGGATGTGTTGCATAGCAATTGATTATG...ATTATGACAATTAAATGCTTCTCTGTATCCTCTAGCCAAATGTTGTTGGCAACA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTTGCCAACAACATTTGGCTAGAGGATACAGAGAAGCATTTAATTGTCATAATGACAGCTCAATTTTATaGCTTGTGGATAGAATAGTT | + |
|
Preference number: 2 (lower is better) Translates to: CCQQHLARGYREAFNCHNDSSIL*LVDRIV Trigger: AACTATTCTATCCACAAGCCATAAAATTGAGCTGTC...ATTATGACAATTAAATGCTTCTCTGTATCCTCTAGCCAAATGTTGTTGGCAACA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR GCA 72 bp | GATCCTGTGAAGACTTCATGCCCCAGTGTAGGGGAATaGCAGGGTGGAGAGGCAGGAGTGGGTGAGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: DPVKTSCPSVGE*QGGEAGVGEWV Trigger: CACCCACTCACCCACTCCTGCCTCTCCACCCTGGCATTCCCCTACACTGGGGCATGAAGTCTTCACAGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR GCA 72 bp | ATGGGAGGAGAGGCCCTTGATCCTGTGAAGACTTCATaGCCCAGTGTAGGGGAATGCCAGGGTGGAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: MGGEALDPVKTS*PSVGECQGGEA Trigger: TGCCTCTCCACCCTGGCATTCCCCTACACTGGGGCATGAAGTCTTCACAGGATCAAGGGCCTCTCCTCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR TCA 72 bp | ATGTCCTTGTTGAGCATCAATGGGAGGAGAGGCCCTTaGTCCTGTGAAGACTTCATGCCCCAGTGTAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: MSLLSINGRRGP*SCEDFMPQCRG Trigger: TCCCCTACACTGGGGCATGAAGTCTTCACAGGATCAAGGGCCTCTCCTCCCATTGATGCTCAACAAGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR TCA 72 bp | GTCTCTAACCACATATATAGCAGAGGATGTCCTTGTTaGGCATCAATGGGAGGAGAGGCCCTTGATCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VSNHIYSRGCPC*ASMGGEALDPV Trigger: CACAGGATCAAGGGCCTCTCCTCCCATTGATGCTCAACAAGGACATCCTCTGCTATATATGTGGTTAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR TCA 72 bp | TTGCAGAGAGTGGGGAGTGGTACCGAGAGGAATACGTaGGAGTCAAGTGCAAAGCAGTTTGCAGTAAACGTT | + |
|
Preference number: 3 (lower is better) Translates to: LQRVGSGTERNT*ESSAKQFAVNV Trigger: AACGTTTACTGCAAACTGCTTTGCACTTGACTCTCACGTATTCCTCTCGGTACCACTCCCCACTCTCTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR GCA 72 bp | GGGATGGCTCATCATGCCTCACTTAAAGAATGCCACTaGTTCCCAAATCCAAAGTCACAAAGTGCACATCCC | + |
|
Preference number: 3 (lower is better) Translates to: GMAHHASLKECH*FPNPKSQSAHP Trigger: GGGATGTGCACTTTGTGACTTTGGATTTGGGAAGCAGTGGCATTCTTTAAGTGAGGCATGATGAGCCATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR CCA 72 bp | AACGAGAAGCAGAGCATATTTGCAGAGAGTGGGGAGTaGTACCGAGAGGAATACGTGAGAGTCAAGTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: NEKQSIFAESGE*YREEYVRVKCK Trigger: TTTGCACTTGACTCTCACGTATTCCTCTCGGTACCACTCCCCACTCTCTGCAAATATGCTCTGCTTCTCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTTGACCAAAGTTTGGTTAACCATGGTTTATCATTCACATGCATGCACAAAACCAACCAGACCCCCTaGAGGTCCCAGGGACGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: EVDQSLVNHGLSFTCMHKTNQTP*RSQGRN Trigger: GTTTCGTCCCTGGGACCTCAAGGGGGTCTGGTTGGT...TTTGTGCATGCATGTGAATGATAAACCATGGTTAACCAAACTTTGGTCAACTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR GCA 72 bp | CCTACTGGGATGGCTCATCATGCCTCACTTAAAGAATaGCACTGCTTCCCAAATCCAAAGTCACAAAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PTGMAHHASLKE*HCFPNPKSQSA Trigger: TGCACTTTGTGACTTTGGATTTGGGAAGCAGTGGCATTCTTTAAGTGAGGCATGATGAGCCATCCCAGTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR GCA 72 bp | AAAAGTCAGGAAGAGATGGCATGGAGGTCCCTAATGTaGAATGCTAATCAGGCCAATTCCATTCTGGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KSQEEMAWRSLM*NANQANSILGE Trigger: CTCTCCCAGAATGGAATTGGCCTGATTAGCATTGCACATTAGGGACCTCCATGCCATCTCTTCCTGACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR GCA 72 bp | GGGGAGTGGTACCGAGAGGAATACGTGAGAGTCAAGTaGAAAGCAGTTTGCAGTAAACGTTATCCCAGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: GEWYREEYVRVK*KAVCSKRYPSY Trigger: ATAACTGGGATAACGTTTACTGCAAACTGCTTTGCACTTGACTCTCACGTATTCCTCTCGGTACCACTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR TCA 72 bp | CCTTCTGCTTCAGTTCCTACTTCCAGGTTCCTTGGCTaGGTTCTATTAGAAAACAGGCTGAGCAAGTTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PSASVPTSRFLG*VLLENRLSKLD Trigger: GTCTAACTTGCTCAGCCTGTTTTCTAATAGAACTCAGCCAAGGAACCTGGAAGTAGGAACTGAAGCAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR TCA 72 bp | CAGACTGGTCTGGAAAACATTTTCTTGATTAGTGATTaGTGTGTGGTGGGAGGATCCAGCTCACTATGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QTGLENIFLISD*CVVGGSSSLWV Trigger: CACCCATAGTGAGCTGGATCCTCCCACCACACATCAATCACTAATCAAGAAAATGTTTTCCAGACCAGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGACACAAGGGGAAGTTGACCAAAGTTTGGTTAACCATGGTTTATCATTCACAAGAAGCAGAGCATATTaGCAGAGAGTGGGGAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: RTQGEVDQSLVNHGLSFTRSRAY*QRVGSG Trigger: ACCACTCCCCACTCTCTGCAAATATGCTCTGCTTCT...TGTGAATGATAAACCATGGTTAACCAAACTTTGGTCAACTTCCCCTTGTGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR TCA 72 bp | TTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATaGATTGTCTTTGAGGAGGTCACAGATGAAGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LSCCCLCGDHRL*IVFEEVTDEED Trigger: GTCCTCTTCATCTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| 3UTR TCA 72 bp | AGCACTGATTCTGATGCAATGCATAAGAAGGCAAACTaGGCAAGGACACAAGGGGAAGTTGACCAAAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: STDSDAMHKKAN*ARTQGEVDQSL Trigger: CAAACTTTGGTCAACTTCCCCTTGTGTCCTTGCTCAGTTTGCCTTCTTATGCATTGCATCAGAATCAGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR GCA 72 bp | TTCTGTTCTCTACAAAAACAAGAATGTGTGTGCATGTaGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FCSLQKQECVCM*VCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACGCACATGCACACACATTCTTGTTTTTGTAGAGAACAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR GCA 72 bp | TACCCTTTCTGTTCTCTACAAAAACAAGAATGTGTGTaGATGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: YPFCSLQKQECV*MCVCVCVCVCV Trigger: CACACACACACACACACACACACACACGCACATGCACACACATTCTTGTTTTTGTAGAGAACAGAAAGGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR GCA 72 bp | AGAATGCCACTGCTTCCCAAATCCAAAGTCACAAAGTaGACATCCCTCCAAACAAAAACATTGTCAGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RMPLLPKSKVTK*TSLQTKTLSGL Trigger: AAGGCCTGACAATGTTTTTGTTTGGAGGGATGTGCACTTTGTGACTTTGGATTTGGGAAGCAGTGGCATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR GCA 72 bp | GGAAAGGCTCATGTTCATCCTAGAACCATTGCCCTCTaGACCCTTTCTCTCAATTCTTTGTGTTTCATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GKAHVHPRTIAL*TLSLNSLCFMV Trigger: AACCATGAAACACAAAGAATTGAGAGAAAGGGTGCAGAGGGCAATGGTTCTAGGATGAACATGAGCCTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR CCA 72 bp | TTCTACATCTTGTTCCTAAGGCAAATTGGAGAAGACTaGCTTCCACAGAGCCAGGAAGAGATTCTGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: FYILFLRQIGED*LPQSQEEILKA Trigger: AGCTTTCAGAATCTCTTCCTGGCTCTGTGGAAGCCAGTCTTCTCCAATTTGCCTTAGGAACAAGATGTAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR-3UTR CAA 90 bp | GTACCAACTTCTGTCTTAGGTAGGGTTTTCATTGCTGTGAAGAGACACCATGGCCAGGCTATTCAGCAATaGAAAAGATGGGAGGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VPTSVLGRVFIAVKRHHGQAIQQ*KRWEVF Trigger: AAAAACCTCCCATCTTTTCAATTGCTGAATAGCCTG...GCCATGGTGTCTCTTCACAGCAATGAAAACCCTACCTAAGACAGAAGTTGGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR TCA 72 bp | CTGTATCAGTTCCTGCCTCCAGATTTCTGTCCAATTTaGGTCCCTGTTCTGACTTCCTTCAATGATGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: LYQFLPPDFCPI*VPVLTSFNDEH Trigger: ATGTTCATCATTGAAGGAAGTCAGAACAGGGACTCAAATTGGACAGAAATCTGGAGGCAGGAACTGATACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR GCA 72 bp | TTGAAATGCCTTCAGGTCTCTGAAGGTCTTCTATGTTaGCAACAACATTTGGCTAGAGGATACAGAGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LKCLQVSEGLLC*QQHLARGYREA Trigger: TGCTTCTCTGTATCCTCTAGCCAAATGTTGTTGGCAACATAGAAGACCTTCAGAGACCTGAAGGCATTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR CCA 72 bp | GCACTTATCCATTTTAAAAGTCAGGAAGAGATGGCATaGAGGTCCCTAATGTGCAATGCTAATCAGGCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: ALIHFKSQEEMA*RSLMCNANQAN Trigger: ATTGGCCTGATTAGCATTGCACATTAGGGACCTCCATGCCATCTCTTCCTGACTTTTAAAATGGATAAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGGTCTCTGAAGGTCTTCTATGTTGCCAACAACATTTGGCTAGAGGATACATTCCTGCCCTTATCATaGCTCTGCATTTGCATAGAT | + |
|
Preference number: 3 (lower is better) Translates to: FRSLKVFYVANNIWLEDTFLPLS*LCICID Trigger: ATCTATGCAAATGCAGAGCAATGATAAGGGCAGGAA...TGTATCCTCTAGCCAAATGTTGTTGGCAACATAGAAGACCTTCAGAGACCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR GCA 72 bp | CGAGAGGAATACGTGAGAGTCAAGTGCAAAGCAGTTTaGAGTAAACGTTATCCCAGTTATGGGTTAATAACA | + |
|
Preference number: 3 (lower is better) Translates to: REEYVRVKCKAV*SKRYPSYGLIT Trigger: TGTTATTAACCCATAACTGGGATAACGTTTACTGCAAACTGCTTTGCACTTGACTCTCACGTATTCCTCTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR GCA 72 bp | AACATTGGGGGAAATGTCATTCTCCTTAATGGCCACTaGATCAAACTAGCACTGATTCTGATGCAATGCATA | + |
|
Preference number: 3 (lower is better) Translates to: NIGGNVILLNGH*IKLALILMQCI Trigger: TATGCATTGCATCAGAATCAGTGCTAGTTTGATGCAGTGGCCATTAAGGAGAATGACATTTCCCCCAATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR GCA 72 bp | CTTCCCATTTTCCTGCCCTTATCATTGCTCTGCATTTaGATAGATTCAGATAGCAAAGCCTTACATGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LPIFLPLSLLCI*IDSDSKALHVE Trigger: TTCAACATGTAAGGCTTTGCTATCTGAATCTATGCAAATGCAGAGCAATGATAAGGGCAGGAAAATGGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR GCA 72 bp | CAGTTTGTCCGAAAGATGCAACTGCACCCATTCCACTaGTTACCAAATTATTTCTTAGGATTCCTCATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: QFVRKMQLHPFH*LPNYFLGFLMN Trigger: ATTCATGAGGAATCCTAAGAAATAATTTGGTAAGCAGTGGAATGGGTGCAGTTGCATCTTTCGGACAAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR CCA 72 bp | CTGCACCCTTTCTCTCAATTCTTTGTGTTTCATGGTTaGTTCTTGATACCTGGCAATTATCTTTATCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LHPFSQFFVFHG*FLIPGNYLYPC Trigger: ACAGGGATAAAGATAATTGCCAGGTATCAAGAACCAACCATGAAACACAAAGAATTGAGAGAAAGGGTGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR CCA 72 bp | AGGTCTCTGAAGGTCTTCTATGTTGCCAACAACATTTaGCTAGAGGATACAGAGAAGCATTTAATTGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: RSLKVFYVANNI*LEDTEKHLIVI Trigger: TATGACAATTAAATGCTTCTCTGTATCCTCTAGCCAAATGTTGTTGGCAACATAGAAGACCTTCAGAGACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR CCA 72 bp | TCAATTCTTTGTGTTTCATGGTTGGTTCTTGATACCTaGCAATTATCTTTATCCCTGTGGCAAATCACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SILCVSWLVLDT*QLSLSLWQITA Trigger: AGCAGTGATTTGCCACAGGGATAAAGATAATTGCCAGGTATCAAGAACCAACCATGAAACACAAAGAATTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR TCA 72 bp | GAAGCATTTAATTGTCATAATTTCAGAAACCCAGTCTaGCAAGTGTCATACCAAGAGACAGCATCCAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: EAFNCHNFRNPV*QVSYQETASSN Trigger: ATTACTGGATGCTGTCTCTTGGTATGACACTTGTCAGACTGGGTTTCTGAAATTATGACAATTAAATGCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR TCA 72 bp | CTCATGAATACATCTCCACAAACCCTGAATTCTAACTaGACAATTTCTACCAGTTTAGAAAGTGAGGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LMNTSPQTLNSN*TISTSLESEEQ Trigger: TTGCTCCTCACTTTCTAAACTGGTAGAAATTGTTCAGTTAGAATTCAGGGTTTGTGGAGATGTATTCATGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR TCA 72 bp | CTTTCTCTCAATTCTTTGTGTTTCATGGTTGGTTCTTaGTACCTGGCAATTATCTTTATCCCTGTGGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSLNSLCFMVGS*YLAIIFIPVAN Trigger: ATTTGCCACAGGGATAAAGATAATTGCCAGGTATCAAGAACCAACCATGAAACACAAAGAATTGAGAGAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR TCA 72 bp | TCTTGTTTAGGAAGAAAATATAAACTGGGTTGTATGTaGCAACTGGCAAGGAATCATCTTATAGCAACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SCLGRKYKLGCM*QLARNHLIATS Trigger: GCTTGTTGCTATAAGATGATTCCTTGCCAGTTGTCACATACAACCCAGTTTATATTTTCTTCCTAAACAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| CDS-3UTR GCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGGTATCCTGGTACTGCTaGCGTCCCCCGGGCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQVSWYC*RPPGSR Trigger: CCTCGAGCCCGGGGGACGGCAGCAGTACCAGGATAC...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR GCA 90 bp | TTGGGCAAGCTCATTGAGCTGCATTGGGAAGGCGGCAGCTCTGGCAAAACAGCTCAGGCTATCCTTCTCTaGCATCAGCTCAGGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGKLIELHWEGGSSGKTAQAILL*HQLRQV Trigger: TACTTGCCTGAGCTGATGGCAGAGAAGGATAGCCTG...AGCTGTTTTGCCAGAGCTGCCGCCTTCCCAATGCAGCTCAATGAGCTTGCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185666.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGTCCAGGTGGTGGTGGTaGTGGAACAGCACCGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQSRWWW*WNSTAT Trigger: CGTGGCGGTGCTGTTCCACCACCACCACCACCTGGA...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGTCGTCCAGGTGGTGGTaGTGGTGGAACAGCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQSSRWW*WWNSTA Trigger: GGCGGTGCTGTTCCACCACCACCACCACCTGGACGA...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR TCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGACCGCCACGGCCCCTTaGTGGAGCTGTGGGAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQTATAP*WSCGSY Trigger: ATAACTCCCACAGCTCCATCAAGGGGCCGTGGCGGT...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGCACACCTCGTCCAGGTaGTGGTGGTGGTGGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQHTSSR*WWWWNS Trigger: GCTGTTCCACCACCACCACCACCTGGACGAGGTGTG...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGCCCGGGCTCGAGGTGTaGGGACACCTCTTGCTATTG | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQPGLEV*GHLLLL Trigger: CAATAGCAAGAGGTGTCCCCACACCTCGAGCCCGGG...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR TCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGGGCATGACTCATCCGTaGATAAGCTTCCCCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQGMTHP*ISFPGW Trigger: CCACCCGGGGAAGCTTATTCACGGATGAGTCATGCC...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGGGCTGGAGCGAGTTGTaGCCCATTCTTCTGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQGWSEL*PILLVR Trigger: ACGCACCAGAAGAATGGGCCACAACTCGCTCCAGCC...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGGTGGTGCCTTCAGGCTaGAGCGAGTTGTGGCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQVVPSG*SELWPI Trigger: AATGGGCCACAACTCGCTCCAGCCTGAAGGCACCAC...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR GCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGAGAAGGCGCGACGCGTaGACAAAAGATGGATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQRRRDA*TKDGSR Trigger: CCTGGATCCATCTTTTGTGCACGCGTCGCGCCTTCT...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR GCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGTGTGGGGACACCTCTTaGTATTGGGGGCACTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQCGDTS*YWGHWK Trigger: CTTCCAGTGCCCCCAATAGCAAGAGGTGTCCCCACA...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGTCAGGTGGGCATACTTaGCCTCCCCACTCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQSGGHT*PPHSSS Trigger: TGAGGAAGAGTGGGGAGGCCAAGTATGCCCACCTGA...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGAGCTCATCACTCAGGTaGGCATACTTGGCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQSSSLR*AYLASP Trigger: TGGGGAGGCCAAGTATGCCCACCTGAGTGATGAGCT...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | AAAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAAAGGTGGTGGTGGTGGTaGAACAGCACCGCCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRTITCLVAVYVETTGYERWWWW*NSTATA Trigger: GGCCGTGGCGGTGCTGTTCCACCACCACCACCACCT...TTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGGACACCTCTTGCTATTaGGGGCACTGGAAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQDTSCY*GHWKSS Trigger: GGAGCTCTTCCAGTGCCCCCAATAGCAAGAGGTGTC...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGTGTGGCCCATTCTTCTaGTGCGTAGCTGTCGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQCGPFF*CVAVVG Trigger: GCCTACGACAGCTACGCACCAGAAGAATGGGCCACA...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | TTGGGCAAGCTCATTGAGCTGCATTGGGAAGGCGGCAGCTCTGGCAAAACAGCTTGCTGCACACTCCTTTaGATACTGTTTCACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGKLIELHWEGGSSGKTACCTLL*ILFHRN Trigger: ATTCCTGTGAAACAGTATCCAAAGGAGTGTGCAGCA...AGCTGTTTTGCCAGAGCTGCCGCCTTCCCAATGCAGCTCAATGAGCTTGCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185666.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATCTGTATCCTGGTACTaGTGCCGTCCCCCGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KRTITCLVAVYVETTGYESVSWY*CRPPGS Trigger: CGAGCCCGGGGGACGGCAGCAGTACCAGGATACAGA...TTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | AAAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAAGGGTGCTCTGTATCCTaGTACTGCTGCCGTCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KRTITCLVAVYVETTGYEGCSVS*YCCRPP Trigger: CGGGGGACGGCAGCAGTACCAGGATACAGAGCACCC...TTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| 3UTR CAA 72 bp | GGCCTTGGAAATTATCTAACGAGAAGCAGAGCATATTaGCAGAGAGTGGGGAGTGGTACCGAGAGGAATACG | + |
|
Preference number: 4 (lower is better) Translates to: GLGNYLTRSRAY*QRVGSGTERNT Trigger: CGTATTCCTCTCGGTACCACTCCCCACTCTCTGCAAATATGCTCTGCTTCTCGTTAGATAATTTCCAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| CDS-3UTR TCA 90 bp | TTGGGCAAGCTCATTGAGCTGCATTGGGAAGGCGGCAGCTCTGGCAAAACAGCTTTCCCATCTGAACCTTaGAATTTCTCAATTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGKLIELHWEGGSSGKTAFPSEP*NFSISS Trigger: GGAAGAAATTGAGAAATTTCAAGGTTCAGATGGGAA...AGCTGTTTTGCCAGAGCTGCCGCCTTCCCAATGCAGCTCAATGAGCTTGCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185666.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAAGTATCCCCCTCTGGCTaGCCTTGGTGGTGGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRTITCLVAVYVETTGYEVSPSG*PWWWCL Trigger: AAGGCACCACCACCAAGGTCAGCCAGAGGGGGATAC...TTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR GCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGCAGGCTATCCTTCTCTaGCATCAGCTCAGGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQQAILL*HQLRQV Trigger: TACTTGCCTGAGCTGATGGCAGAGAAGGATAGCCTG...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGAGATTCTGAAAGCTCACATCCACAGTGATACACTTCCTCCAACAAGGCAGGCTATCCTTCTCTaGCATCAGCTCAGGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QEEILKAHIHSDTLPPTRQAILL*HQLRQV Trigger: TACTTGCCTGAGCTGATGGCAGAGAAGGATAGCCTG...CCTTGTTGGAGGAAGTGTATCACTGTGGATGTGAGCTTTCAGAATCTCTTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAAACCTCGTCCAGGTGGTaGTGGTGGTGGAACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KRTITCLVAVYVETTGYETSSRW*WWWNST Trigger: GGTGCTGTTCCACCACCACCACCACCTGGACGAGGT...TTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | AAAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAACCCTGTATCCCCCTCTaGCTGACCTTGGTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KRTITCLVAVYVETTGYEPCIPL*LTLVVV Trigger: CACCACCACCAAGGTCAGCCAGAGGGGGATACAGGG...TTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR GCA 90 bp | CTCATGTTCATCCTAGAACCATTGCCCTCTGCACCCTTTCTCTCAATTCTTTGTCAGGCTATCCTTCTCTaGCATCAGCTCAGGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LMFILEPLPSAPFLSILCQAILL*HQLRQV Trigger: TACTTGCCTGAGCTGATGGCAGAGAAGGATAGCCTG...ACAAAGAATTGAGAGAAAGGGTGCAGAGGGCAATGGTTCTAGGATGAACATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| CDS-3UTR GCA 90 bp | AAAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAAAGCTGGAGGTGGGGGTaGTCTGTATCCTGGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRTITCLVAVYVETTGYESWRWG*SVSWYC Trigger: GCAGTACCAGGATACAGAGCACCCCCACCTCCAGCT...TTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGCAAGGAGTTTCCTCTTaGTCCAAGCAATTTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQQGVSS*SKQFPH Trigger: GTGGGGAAATTGCTTGGACCAAGAGGAAACTCCTTG...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | AAAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATGCTATTGGGGGCACTaGAAGAGCTCCACGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KRTITCLVAVYVETTGYECYWGH*KSSTGH Trigger: GTGACCCGTGGAGCTCTTCCAGTGCCCCCAATAGCA...TTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | AAAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAAATCATGAGCTGGAGGTaGGGGTGCTCTGTATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRTITCLVAVYVETTGYEIMSWR*GCSVSW Trigger: CCAGGATACAGAGCACCCCCACCTCCAGCTCATGAT...TTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR TCA 90 bp | GAAGTTGACCAAAGTTTGGTTAACCATGGTTTATCATTCACATGCATGCACAAAACAGGAACTATGTCCTaGGAAGGAGGCAGGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: EVDQSLVNHGLSFTCMHKTGTMS*EGGRGM Trigger: CATCCCCCTGCCTCCTTCTCAGGACATAGTTCCTGT...TTTGTGCATGCATGTGAATGATAAACCATGGTTAACCAAACTTTGGTCAACTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| CDS-3UTR GCA 90 bp | TTCAGGTCTCTGAAGGTCTTCTATGTTGCCAACAACATTTGGCTAGAGGATACAGCACGAAGAAGTACATaGTGCATGCATGCAGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: FRSLKVFYVANNIWLEDTARRST*CMHAVP Trigger: AGGTACTGCATGCATGCAGCATGTACTTCTTCGTGC...TGTATCCTCTAGCCAAATGTTGTTGGCAACATAGAAGACCTTCAGAGACCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| CDS-3UTR CCA 90 bp | AGACAACCAGCAGTCAACAATGAAGCTTTGGATAAGAAGCATGTATATCACAGTGACTGGGCAACAGTGTaGTACCAGAAAGCAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQPAVNNEALDKKHVYHSDWATV*YQKASL Trigger: GAGGCTTGCTTTCTGGTACCACACTGTTGCCCAGTC...ACTGTGATATACATGCTTCTTATCCAAAGCTTCATTGTTGACTGCTGGTTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| CDS-3UTR GCA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGACTTCAATTAATACATaGAGCTCATCACTCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VAVYVETTGYELSLRRSQTSINT*SSSLRW Trigger: CCACCTGAGTGATGAGCTGCATGTATTAATTGAAGT...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR CCA 90 bp | TCATGGTTGGTTCTTGATACCTGGCAATTATCTTTATCCCTGTGGCAAATCACTCAAGGAGTTTCCTCTTaGTCCAAGCAATTTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SWLVLDTWQLSLSLWQITQGVSS*SKQFPH Trigger: GTGGGGAAATTGCTTGGACCAAGAGGAAACTCCTTG...AGTGATTTGCCACAGGGATAAAGATAATTGCCAGGTATCAAGAACCAACCATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| CDS-3UTR TCA 90 bp | AGACAACCAGCAGTCAACAATGAAGCTTTGGATAAGAAGCATGTATATCACAGTAAGGAGGCAGGGGGATaGTGGAAGAAAATAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RQPAVNNEALDKKHVYHSKEAGG*WKKIVT Trigger: AGTCACTATTTTCTTCCATCATCCCCCTGCCTCCTT...ACTGTGATATACATGCTTCTTATCCAAAGCTTCATTGTTGACTGCTGGTTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| CDS-3UTR GCA 90 bp | TCAATTGCTATGCAACACATCCCTTCATACACTTTTATAAGATCGCCCAAGTCGTACATGCTGCATGCATaGAGTACCTTTGGATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SIAMQHIPSYTFIRSPKSYMLHA*STFGYC Trigger: ACAGTATCCAAAGGTACTGCATGCATGCAGCATGTA...CGACTTGGGCGATCTTATAAAAGTGTATGAAGGGATGTGTTGCATAGCAATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR CAA 72 bp | CAGGTCTCTGAAGGTCTTCTATGTTGCCAACAACATTaGGCTAGAGGATACAGAGAAGCATTTAATTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QVSEGLLCCQQH*ARGYREAFNCH Trigger: ATGACAATTAAATGCTTCTCTGTATCCTCTAGCCAAATGTTGTTGGCAACATAGAAGACCTTCAGAGACCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR CAA 72 bp | ATAAGAAGGCAAACTGAGCAAGGACACAAGGGGAAGTaGACCAAAGTTTGGTTAACCATGGTTTATCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: IRRQTEQGHKGK*TKVWLTMVYHS Trigger: TGAATGATAAACCATGGTTAACCAAACTTTGGTCAACTTCCCCTTGTGTCCTTGCTCAGTTTGCCTTCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| CDS-3UTR TCA 90 bp | TCATGGTTGGTTCTTGATACCTGGCAATTATCTTTATCCCTGTGGCAAATCACTTTCCCATCTGAACCTTaGAATTTCTCAATTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SWLVLDTWQLSLSLWQITFPSEP*NFSISS Trigger: GGAAGAAATTGAGAAATTTCAAGGTTCAGATGGGAA...AGTGATTTGCCACAGGGATAAAGATAATTGCCAGGTATCAAGAACCAACCATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| CDS-3UTR CCA 90 bp | TGCTATGCAACACATCCCTTCATACACTTTTATAAGATCGCCCAAGTCGATATTTGCATGCAGTACCTTTaGATACTGTTTCACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CYATHPFIHFYKIAQVDICMQYL*ILFHRN Trigger: ATTCCTGTGAAACAGTATCCAAAGGTACTGCATGCA...AATATCGACTTGGGCGATCTTATAAAAGTGTATGAAGGGATGTGTTGCATAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR CAA 72 bp | CCTTTCTCTCAATTCTTTGTGTTTCATGGTTGGTTCTaGATACCTGGCAATTATCTTTATCCCTGTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PFSQFFVFHGWF*IPGNYLYPCGK Trigger: TTTGCCACAGGGATAAAGATAATTGCCAGGTATCAAGAACCAACCATGAAACACAAAGAATTGAGAGAAAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR CAA 72 bp | AAGCCAACTAGACAACCAGCAGTCAACAATGAAGCTTaGGATAAGAAGCATGTATATCACAGTGTATGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPTRQPAVNNEA*DKKHVYHSVCD Trigger: ATCACATACACTGTGATATACATGCTTCTTATCCAAAGCTTCATTGTTGACTGCTGGTTGTCTAGTTGGCTT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| CDS-3UTR TCA 90 bp | AAAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATTCCCATCTGAACCTTaGAATTTCTCAATTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRTITCLVAVYVETTGYEFPSEP*NFSISS Trigger: GGAAGAAATTGAGAAATTTCAAGGTTCAGATGGGAA...TTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS-3UTR TCA 90 bp | TGTTGCCAACAACATTTGGCTAGAGGATACAGAGAAGCATTTAATTGTCATAATTTCCCATCTGAACCTTaGAATTTCTCAATTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CCQQHLARGYREAFNCHNFPSEP*NFSISS Trigger: GGAAGAAATTGAGAAATTTCAAGGTTCAGATGGGAA...ATTATGACAATTAAATGCTTCTCTGTATCCTCTAGCCAAATGTTGTTGGCAACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
||
| 3UTR CAA 72 bp | TTATTACAAACATTAAACTTGATGTCCCTTAGCATGTaGTGGCCTTCGGGTCAGATGATGCATGTAATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLQTLNLMSLSM*WPSGQMMHVIN Trigger: ATTTATTACATGCATCATCTGACCCGAAGGCCACAACATGCTAAGGGACATCAAGTTTAATGTTTGTAATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| 3UTR CAA 72 bp | CACAAACCAAAAACATTCCAATCAGAACCAACTATGTaGGGAGGGTCACATAACTTAATTAGAAACAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: HKPKTFQSEPTM*GGSHNLIRNRI Trigger: AATTCTGTTTCTAATTAAGTTATGTGACCCTCCCAACATAGTTGGTTCTGATTGGAATGTTTTTGGTTTGTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
||
| CDS CCA 90 bp | GTGCTCTGTATCCTGGTACTGCTGCCGTCCCCCGGGCTCGAGGTGTaGGGACACCTCTTGCTATTGGGGGCACTGGAAGAGCTCCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLCILVLLPSPGLEV*GHLLLLGALEELHG Trigger: CCCGTGGAGCTCTTCCAGTGCCCCCAATAGCAAGAGGTGTCCCCACACCTCGAGCCCGGGGGACGGCAGCAGTACCAGGATACAGAGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS CCA 90 bp | CCCTGTATCCCCCTCTGGCTGACCTTGGTGGTGGTGCCTTCAGGCTaGAGCGAGTTGTGGCCCATTCTTCTGGTGCGTAGCTGTCGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PCIPLWLTLVVVPSG*SELWPILLVRSCRR Trigger: CCTACGACAGCTACGCACCAGAAGAATGGGCCACAACTCGCTCCAGCCTGAAGGCACCACCACCAAGGTCAGCCAGAGGGGGATACAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
||
| CDS GCA 90 bp | ATCATACCCATATTCTTCATAAGCATCATGAGCTGGAGGTGGGGGTaGTCTGTATCCTGGTACTGCTGCCGTCCCCCGGGCTCGAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: IIPIFFISIMSWRWG*SVSWYCCRPPGSRC Trigger: ACACCTCGAGCCCGGGGGACGGCAGCAGTACCAGGATACAGAGCACCCCCACCTCCAGCTCATGATGCTTATGAAGAATATGGGTATGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS TCA 90 bp | TCTGATCCCTCTGCCTCTAATACCTCGGCCCCGGCCAGACTCTTCTaGGCCATTCAAGTAAGACAACTCCCGGAGTTGCTCTTGACGAAT | + |
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Preference number: 5 (lower is better) Translates to: SDPSASNTSAPARLF*AIQVRQLPELLLTN Trigger: ATTCGTCAAGAGCAACTCCGGGAGTTGTCTTACTTGAATGGCTCAGAAGAGTCTGGCCGGGGCCGAGGTATTAGAGGCAGAGGGATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS-3UTR CAA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGGGACACCTCTTGCTATaGGGGGCACTGGAAGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: VAVYVETTGYELSLRRSQGHLLL*GALEEL Trigger: GAGCTCTTCCAGTGCCCCCAATAGCAAGAGGTGTCC...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS-3UTR CAA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGTCAGGCTGGAGCGAGTaGTGGCCCATTCTTCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: VAVYVETTGYELSLRRSQSGWSE*WPILLV Trigger: CACCAGAAGAATGGGCCACAACTCGCTCCAGCCTGA...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS-3UTR CAA 90 bp | TTGGGCAAGCTCATTGAGCTGCATTGGGAAGGCGGCAGCTCTGGCAAAACAGCTTTGCTGCACACTCCTTaGGATACTGTTTCACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LGKLIELHWEGGSSGKTALLHTP*DTVSQE Trigger: TTCCTGTGAAACAGTATCCAAAGGAGTGTGCAGCAA...AGCTGTTTTGCCAGAGCTGCCGCCTTCCCAATGCAGCTCAATGAGCTTGCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185666.2 |
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| CDS-3UTR CAA 90 bp | TTGGGCAAGCTCATTGAGCTGCATTGGGAAGGCGGCAGCTCTGGCAAAACAGCTCAGGAAGATAAAGGTTaGCTGCACACTCCTTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: LGKLIELHWEGGSSGKTAQEDKG*LHTPLD Trigger: ATCCAAAGGAGTGTGCAGCAAACCTTTATCTTCCTG...AGCTGTTTTGCCAGAGCTGCCGCCTTCCCAATGCAGCTCAATGAGCTTGCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185666.2 |
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| CDS-3UTR CAA 90 bp | AAAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAACCCCTCTGGCTGACCTaGGTGGTGGTGCCTTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KRTITCLVAVYVETTGYEPLWLT*VVVPSG Trigger: GCCTGAAGGCACCACCACCAAGGTCAGCCAGAGGGG...TTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS-3UTR CAA 90 bp | TTGGGCAAGCTCATTGAGCTGCATTGGGAAGGCGGCAGCTCTGGCAAAACAGCTGAGAGCTTTATGTTTTaGTTGCTGATGACATCGAGA | + |
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Preference number: 5 (lower is better) Translates to: LGKLIELHWEGGSSGKTAESFMF*LLMTSR Trigger: TCTCGATGTCATCAGCAACAAAAACATAAAGCTCTC...AGCTGTTTTGCCAGAGCTGCCGCCTTCCCAATGCAGCTCAATGAGCTTGCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185666.2 |
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| CDS-3UTR CAA 90 bp | AAAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAACTCAGGTGGGCATACTaGGCCTCCCCACTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KRTITCLVAVYVETTGYELRWAY*ASPLFL Trigger: GAGGAAGAGTGGGGAGGCCAAGTATGCCCACCTGAG...TTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS-3UTR CAA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGCTCCCGGAGTTGCTCTaGACGAATTTCATCATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VAVYVETTGYELSLRRSQLPELL*TNFIIV Trigger: TACAATGATGAAATTCGTCAAGAGCAACTCCGGGAG...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS-3UTR CAA 90 bp | GTTGCTGTTTATGTGGAGACCACAGGCTATGAATTGTCTTTGAGGAGGTCACAGGAGAGCTTTATGTTTTaGTTGCTGATGACATCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VAVYVETTGYELSLRRSQESFMF*LLMTSR Trigger: TCTCGATGTCATCAGCAACAAAAACATAAAGCTCTC...CTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS-3UTR CAA 90 bp | CATTTTAAAAGTCAGGAAGAGATGGCATGGAGGTCCCTAATGTGCAATGCTAATTCTCGCATGGACCCTTaGCCCAGGATAGACATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HFKSQEEMAWRSLMCNANSRMDP*PRIDIL Trigger: TAAAATGTCTATCCTGGGCAAAGGGTCCATGCGAGA...ATTAGCATTGCACATTAGGGACCTCCATGCCATCTCTTCCTGACTTTTAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| CDS-3UTR CAA 90 bp | CATTTTAAAAGTCAGGAAGAGATGGCATGGAGGTCCCTAATGTGCAATGCTAATCAAAGCTCAGTACCTTaGTCTTATCTCGCATGGACC | + |
|
Preference number: 5 (lower is better) Translates to: HFKSQEEMAWRSLMCNANQSSVP*SYLAWT Trigger: GGTCCATGCGAGATAAGACAAAGGTACTGAGCTTTG...ATTAGCATTGCACATTAGGGACCTCCATGCCATCTCTTCCTGACTTTTAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| CDS CCA 90 bp | CACACTGAGCACGAAGAAGTACATGCTGCATGCATGCAGTACCTTTaGATACTGTTTCACAGGAATCAATACTCTTTCAGAGAGCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: HTEHEEVHAACMQYL*ILFHRNQYSFRELY Trigger: ATAAAGCTCTCTGAAAGAGTATTGATTCCTGTGAAACAGTATCCAAAGGTACTGCATGCATGCAGCATGTACTTCTTCGTGCTCAGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| CDS-3UTR CAA 90 bp | CTCCAAACAAAAACATTGTCAGGCCTTTCACAACAATACACCAGTCCCTGGTACGAGAGCTTTATGTTTTaGTTGCTGATGACATCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQTKTLSGLSQQYTSPWYESFMF*LLMTSR Trigger: TCTCGATGTCATCAGCAACAAAAACATAAAGCTCTC...GTACCAGGGACTGGTGTATTGTTGTGAAAGGCCTGACAATGTTTTTGTTTGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| CDS-3UTR CAA 90 bp | AAAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATCAAGGAGTTTCCTCTaGGTCCAAGCAATTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KRTITCLVAVYVETTGYESRSFL*VQAISP Trigger: TGGGGAAATTGCTTGGACCAAGAGGAAACTCCTTGA...TTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS-3UTR CAA 90 bp | AAAAGGACTATTACTTGTCTTGTTGCTGTTTATGTGGAGACCACAGGCTATGAATCTCGCATGGACCCTTaGCCCAGGATAGACATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KRTITCLVAVYVETTGYESRMDP*PRIDIL Trigger: TAAAATGTCTATCCTGGGCAAAGGGTCCATGCGAGA...TTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTAATAGTCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS-3UTR CAA 90 bp | CACCATGGCCAAGGCAACTCTTATAAAGGACAAAATTTAATTGGGGCTGGCTTAATGCATGCAGTACCTTaGGATACTGTTTCACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HHGQGNSYKGQNLIGAGLMHAVP*DTVSQE Trigger: TTCCTGTGAAACAGTATCCAAAGGTACTGCATGCAT...TAAGCCAGCCCCAATTAAATTTTGTCCTTTATAAGAGTTGCCTTGGCCATGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| CDS GCA 90 bp | ATGGGTGACTTCAGAATTCACAGAAGCAGGAAGATAAAGGTTTGCTaGACACTCCTTTGGATACTGTTTCACAGGAATCAATACTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: MGDFRIHRSRKIKVC*TLLWILFHRNQYSF Trigger: GAAAGAGTATTGATTCCTGTGAAACAGTATCCAAAGGAGTGTGCAGCAAACCTTTATCTTCCTGCTTCTGTGAATTCTGAAGTCACCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185666.2 |
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| CDS GCA 90 bp | GATATGGGTGACTTCAGAATTCACAGAAGCAGGAAGATAAAGGTTTaGTGCACACTCCTTTGGATACTGTTTCACAGGAATCAATACTCT | + |
|
Preference number: 5 (lower is better) Translates to: DMGDFRIHRSRKIKV*CTLLWILFHRNQYS Trigger: AGAGTATTGATTCCTGTGAAACAGTATCCAAAGGAGTGTGCAGCAAACCTTTATCTTCCTGCTTCTGTGAATTCTGAAGTCACCCATATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185666.2 |
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| CDS GCA 90 bp | TCATTTTTGTTCCAACACACTGAGCACGAAGAAGTACATGCTGCATaGATGCAGTACCTTTGGATACTGTTTCACAGGAATCAATACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SFLFQHTEHEEVHAA*MQYLWILFHRNQYS Trigger: AGAGTATTGATTCCTGTGAAACAGTATCCAAAGGTACTGCATGCATGCAGCATGTACTTCTTCGTGCTCAGTGTGTTGGAACAAAAATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| CDS-3UTR CAA 90 bp | AGGACACAAGGGGAAGTTGACCAAAGTTTGGTTAACCATGGTTTATCATTCACAGAGAGCTTTATGTTTTaGTTGCTGATGACATCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RTQGEVDQSLVNHGLSFTESFMF*LLMTSR Trigger: TCTCGATGTCATCAGCAACAAAAACATAAAGCTCTC...TGTGAATGATAAACCATGGTTAACCAAACTTTGGTCAACTTCCCCTTGTGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| CDS CCA 90 bp | AGAATTCACAGAAGCAGGAAGATAAAGGTTTGCTGCACACTCCTTTaGATACTGTTTCACAGGAATCAATACTCTTTCAGAGAGCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: RIHRSRKIKVCCTLL*ILFHRNQYSFRELY Trigger: ATAAAGCTCTCTGAAAGAGTATTGATTCCTGTGAAACAGTATCCAAAGGAGTGTGCAGCAAACCTTTATCTTCCTGCTTCTGTGAATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185666.2 |
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| CDS CCA 72 bp | ATCCTGGTACTGCTGCCGTCCCCCGGGCTCGAGGTGTaGGGACACCTCTTGCTATTGGGGGCACTGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ILVLLPSPGLEV*GHLLLLGALEE Trigger: CTCTTCCAGTGCCCCCAATAGCAAGAGGTGTCCCCACACCTCGAGCCCGGGGGACGGCAGCAGTACCAGGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS CCA 72 bp | AATATCTACCATAGGGGTGCTCCCTGTATCCCCCTCTaGCTGACCTTGGTGGTGGTGCCTTCAGGCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: NIYHRGAPCIPL*LTLVVVPSGWS Trigger: GCTCCAGCCTGAAGGCACCACCACCAAGGTCAGCCAGAGGGGGATACAGGGAGCACCCCTATGGTAGATATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS CAA 90 bp | AATATCTACCATAGGGGTGCTCCCTGTATCCCCCTCTGGCTGACCTaGGTGGTGGTGCCTTCAGGCTGGAGCGAGTTGTGGCCCATTCTT | + |
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Preference number: 6 (lower is better) Translates to: NIYHRGAPCIPLWLT*VVVPSGWSELWPIL Trigger: AAGAATGGGCCACAACTCGCTCCAGCCTGAAGGCACCACCACCAAGGTCAGCCAGAGGGGGATACAGGGAGCACCCCTATGGTAGATATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS GCA 72 bp | ATATTCTTCATAAGCATCATGAGCTGGAGGTGGGGGTaGTCTGTATCCTGGTACTGCTGCCGTCCCCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IFFISIMSWRWG*SVSWYCCRPPG Trigger: GCCCGGGGGACGGCAGCAGTACCAGGATACAGAGCACCCCCACCTCCAGCTCATGATGCTTATGAAGAATAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS TCA 72 bp | TCTGCCTCTAATACCTCGGCCCCGGCCAGACTCTTCTaGGCCATTCAAGTAAGACAACTCCCGGAGTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SASNTSAPARLF*AIQVRQLPELL Trigger: GAGCAACTCCGGGAGTTGTCTTACTTGAATGGCTCAGAAGAGTCTGGCCGGGGCCGAGGTATTAGAGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS TCA 72 bp | ACACAGGAACTATGTCCTGAGAAGGAGGCAGGGGGATaGTGGAAGAAAATAGTGACTTCAGACTGGGCAACA | + |
|
Preference number: 6 (lower is better) Translates to: TQELCPEKEAGG*WKKIVTSDWAT Trigger: TGTTGCCCAGTCTGAAGTCACTATTTTCTTCCATCATCCCCCTGCCTCCTTCTCAGGACATAGTTCCTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| CDS CCA 72 bp | ATCATCATACCCATATTCTTCATAAGCATCATGAGCTaGAGGTGGGGGTGCTCTGTATCCTGGTACTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IIIPIFFISIMS*RWGCSVSWYCC Trigger: GCAGCAGTACCAGGATACAGAGCACCCCCACCTCCAGCTCATGATGCTTATGAAGAATATGGGTATGATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS CAA 72 bp | AAGCTCAGTACCTTTGTCTTATCTCGCATGGACCCTTaGCCCAGGATAGACATTTTAGCACCCGTTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KLSTFVLSRMDP*PRIDILAPVSS Trigger: AGAAGAAACGGGTGCTAAAATGTCTATCCTGGGCAAAGGGTCCATGCGAGATAAGACAAAGGTACTGAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| CDS GCA 72 bp | TTCCAACACACTGAGCACGAAGAAGTACATGCTGCATaGATGCAGTACCTTTGGATACTGTTTCACAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: FQHTEHEEVHAA*MQYLWILFHRN Trigger: ATTCCTGTGAAACAGTATCCAAAGGTACTGCATGCATGCAGCATGTACTTCTTCGTGCTCAGTGTGTTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189878.2 |
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| CDS CCA 72 bp | TGGAAGAAAATAGTGACTTCAGACTGGGCAACAGTGTaGTACCAGAAAGCAAGCCTCATAGAAAACAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: WKKIVTSDWATV*YQKASLIENRE Trigger: TTCCCTGTTTTCTATGAGGCTTGCTTTCTGGTACCACACTGTTGCCCAGTCTGAAGTCACTATTTTCTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188257.7 |
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| CDS CAA 72 bp | CATGACCGTAGTCATAGTATTCAGGCACACTTTGTGTaGGGGTCACGTAGCTATTATCATAAGCCTCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: HDRSHSIQAHFV*GSRSYYHKPHR Trigger: CCTATGAGGCTTATGATAATAGCTACGTGACCCCAACACAAAGTGTGCCTGAATACTATGACTACGGTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS CAA 72 bp | TACTCCATGACCGTAGTCATAGTATTCAGGCACACTTaGTGTTGGGGTCACGTAGCTATTATCATAAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: YSMTVVIVFRHT*CWGHVAIIISL Trigger: GAGGCTTATGATAATAGCTACGTGACCCCAACACAAAGTGTGCCTGAATACTATGACTACGGTCATGGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS CCA 72 bp | ATGACCGTAGTCATAGTATTCAGGCACACTTTGTGTTaGGGTCACGTAGCTATTATCATAAGCCTCATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: MTVVIVFRHTLC*GHVAIIISLIG Trigger: ACCTATGAGGCTTATGATAATAGCTACGTGACCCCAACACAAAGTGTGCCTGAATACTATGACTACGGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027226.12 |
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| CDS GCA 72 bp | GACTTCAGAATTCACAGAAGCAGGAAGATAAAGGTTTaGTGCACACTCCTTTGGATACTGTTTCACAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: DFRIHRSRKIKV*CTLLWILFHRN Trigger: ATTCCTGTGAAACAGTATCCAAAGGAGTGTGCAGCAAACCTTTATCTTCCTGCTTCTGTGAATTCTGAAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185666.2 |
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| CDS GCA 72 bp | TTCAGAATTCACAGAAGCAGGAAGATAAAGGTTTGCTaGACACTCCTTTGGATACTGTTTCACAGGAATCAA | + |
|
Preference number: 6 (lower is better) Translates to: FRIHRSRKIKVC*TLLWILFHRNQ Trigger: TTGATTCCTGTGAAACAGTATCCAAAGGAGTGTGCAGCAAACCTTTATCTTCCTGCTTCTGTGAATTCTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185666.2 |
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