Pregenerated sensors for KEL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029866Ensembl transcript IDs: ENSMUST00000031899.14, ENSMUST00000192118.2, ENSMUST00000194597.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AATACACGCTTTTATTTGGGAACAGAAAGAAGAGAGAGATTTATTTaGACTTCAAGGATGGACTCACAAGCAGCCCATGCATTTACATCA | + |
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Preference number: 2 (lower is better) Translates to: NTRFYLGTERRERFI*TSRMDSQAAHAFTS Trigger: TGATGTAAATGCATGGGCTGCTTGTGAGTCCATCCTTGAAGTCAAAATAAATCTCTCTCTTCTTTCTGTTCCCAAATAAAAGCGTGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000194597.2 |
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| CDS GCA 90 bp | GCTATGTCAGGCTTCACGGCCCGTTTTGGTGCCCCCATCTCCACCTaGAGTTGGGCAAGCTTGTTCAAGGCCTCTTTCTGGGTCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: AMSGFTARFGAPIST*SWASLFKASFWVSS Trigger: TGAGGAGACCCAGAAAGAGGCCTTGAACAAGCTTGCCCAACTGCAGGTGGAGATGGGGGCACCAAAACGGGCCGTGAAGCCTGACATAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS CCA 90 bp | AAGAGCTTGTCCTGTGCCTGCTGCTGCTGCTGTGGCCTCAGAAACTaGAACAGCCGGGAGGTAAAGACGATGGACCAGGAGGCATGCTGT | + |
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Preference number: 5 (lower is better) Translates to: KSLSCACCCCCGLRN*NSREVKTMDQEACC Trigger: ACAGCATGCCTCCTGGTCCATCGTCTTTACCTCCCGGCTGTTCCAGTTTCTGAGGCCACAGCAGCAGCAGCAGGCACAGGACAAGCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS CCA 90 bp | TCAGGCTTCACGGCCCGTTTTGGTGCCCCCATCTCCACCTGCAGTTaGGCAAGCTTGTTCAAGGCCTCTTTCTGGGTCTCCTCACTTATC | + |
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Preference number: 5 (lower is better) Translates to: SGFTARFGAPISTCS*ASLFKASFWVSSLI Trigger: GATAAGTGAGGAGACCCAGAAAGAGGCCTTGAACAAGCTTGCCCAACTGCAGGTGGAGATGGGGGCACCAAAACGGGCCGTGAAGCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS TCA 90 bp | ATGGACTCGAAGGCTTGGAGGACTGTGAGGGTCCTGAGGGTCTTGTaGGCTCAGCCCCCTACACATTACCTGGGCATAGCTTCGGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: MDSKAWRTVRVLRVL*AQPPTHYLGIASEE Trigger: TTCTTCCGAAGCTATGCCCAGGTAATGTGTAGGGGGCTGAGCTCACAAGACCCTCAGGACCCTCACAGTCCTCCAAGCCTTCGAGTCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS TCA 90 bp | TCGATGGCTGGGGCCATTTCCTGCAGTTCGTCAATAGTAACCACATaGAAGAGCTTGTCCTGTGCCTGCTGCTGCTGCTGTGGCCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: SMAGAISCSSSIVTT*KSLSCACCCCCGLR Trigger: TCTGAGGCCACAGCAGCAGCAGCAGGCACAGGACAAGCTCTTTCATGTGGTTACTATTGACGAACTGCAGGAAATGGCCCCAGCCATCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS GCA 90 bp | AGAAACTGGAACAGCCGGGAGGTAAAGACGATGGACCAGGAGGCATaGTGTTGTGCTTCCTGTGGGTTACTCCCCAGTAATGTTCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RNWNSREVKTMDQEA*CCASCGLLPSNVPS Trigger: GCTGGGAACATTACTGGGGAGTAACCCACAGGAAGCACAACAGCATGCCTCCTGGTCCATCGTCTTTACCTCCCGGCTGTTCCAGTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS GCA 90 bp | ATTATATTCCTGTGTGGCTATGTCAGGCTTCACGGCCCGTTTTGGTaGCCCCATCTCCACCTGCAGTTGGGCAAGCTTGTTCAAGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: IIFLCGYVRLHGPFW*PHLHLQLGKLVQGL Trigger: GAGGCCTTGAACAAGCTTGCCCAACTGCAGGTGGAGATGGGGGCACCAAAACGGGCCGTGAAGCCTGACATAGCCACACAGGAATATAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS CCA 90 bp | ATCATTATATTCCTGTGTGGCTATGTCAGGCTTCACGGCCCGTTTTaGTGCCCCCATCTCCACCTGCAGTTGGGCAAGCTTGTTCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: IIIFLCGYVRLHGPF*CPHLHLQLGKLVQG Trigger: GCCTTGAACAAGCTTGCCCAACTGCAGGTGGAGATGGGGGCACCAAAACGGGCCGTGAAGCCTGACATAGCCACACAGGAATATAATGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS TCA 90 bp | GCTCTTGCTGGAGAAGAATGTCAAACTCCGGCTGGTCTATCTGGATaGTTGGTGTATGTGGAGGGGCTGGATGAGGTCGTAGATAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: ALAGEECQTPAGLSG*LVYVEGLDEVVDRL Trigger: GAGCCTATCTACGACCTCATCCAGCCCCTCCACATACACCAATCATCCAGATAGACCAGCCGGAGTTTGACATTCTTCTCCAGCAAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS TCA 90 bp | CAGGGAGTAAGAGTTGGTAGAAGATATGCAACAATTCATGGGCCATaGTGCTGCCAGCAGCGCCAAAGTTCACAGCTCTGGGGTAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: QGVRVGRRYATIHGP*CCQQRQSSQLWGSQ Trigger: CTGGCTACCCCAGAGCTGTGAACTTTGGCGCTGCTGGCAGCATCATGGCCCATGAATTGTTGCATATCTTCTACCAACTCTTACTCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS CCA 90 bp | CCCATCTCCACCTGCAGTTGGGCAAGCTTGTTCAAGGCCTCTTTCTaGGTCTCCTCACTTATCCAGGAAAGCTTTTTGAGGCGTATGATG | + |
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Preference number: 5 (lower is better) Translates to: PISTCSWASLFKASF*VSSLIQESFLRRMM Trigger: CATCATACGCCTCAAAAAGCTTTCCTGGATAAGTGAGGAGACCCAGAAAGAGGCCTTGAACAAGCTTGCCCAACTGCAGGTGGAGATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS GCA 90 bp | AGCACTTTGAATGCTTGGGCCAAAAGCTTCACGAACAAACAGAGCTaGCAGAGTAGGCTCAAAGAAGGCTCCCGTCTGTTCCACACACTT | + |
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Preference number: 5 (lower is better) Translates to: STLNAWAKSFTNKQS*QSRLKEGSRLFHTL Trigger: AAGTGTGTGGAACAGACGGGAGCCTTCTTTGAGCCTACTCTGGCAGCTCTGTTTGTTCGTGAAGCTTTTGGCCCAAGCATTCAAAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS CCA 90 bp | TCCAACAGTCTCCACAGTCGGCTCTTGTTCTCTTCTGTAAGTGCTTaGAAAGAGTCACTGGTCCCATTGGCTTTTTCACAGGCAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SNSLHSRLLFSSVSA*KESLVPLAFSQAKL Trigger: CAGCTTTGCCTGTGAAAAAGCCAATGGGACCAGTGACTCTTTCCAAGCACTTACAGAAGAGAACAAGAGCCGACTGTGGAGACTGTTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS GCA 90 bp | CCTCTTGCTATATGCCTGGAATGCAATGGCTACGCCTCCTATGTCTaGAGCATTTTCCAGGAGTGTGTGAGAACCATTGAACGAGGATAT | + |
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Preference number: 5 (lower is better) Translates to: PLAICLECNGYASYV*SIFQECVRTIERGY Trigger: ATATCCTCGTTCAATGGTTCTCACACACTCCTGGAAAATGCTGCAGACATAGGAGGCGTAGCCATTGCATTCCAGGCATATAGCAAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS TCA 90 bp | CCAGCCTCCAAGCTCTTCAATAATTTGTATGAGTGGACCAGACCCTaGAGCTTCAATGGCATCTGTGTCCATGCAGGAGTTATAAAATTG | + |
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Preference number: 5 (lower is better) Translates to: PASKLFNNLYEWTRP*SFNGICVHAGVIKL Trigger: CAATTTTATAACTCCTGCATGGACACAGATGCCATTGAAGCTTCAGGGTCTGGTCCACTCATACAAATTATTGAAGAGCTTGGAGGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS TCA 90 bp | ATGACAGCATCCTTTATCTCAGCAAATAATTCCATGGCAGCACTTTaGATGCTTGGGCCAAAAGCTTCACGAACAAACAGAGCTGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: MTASFISANNSMAAL*MLGPKASRTNRAAR Trigger: TCTGGCAGCTCTGTTTGTTCGTGAAGCTTTTGGCCCAAGCATTCAAAGTGCTGCCATGGAATTATTTGCTGAGATAAAGGATGCTGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS TCA 90 bp | TGGACATTTCTGGCCCGGAGGGATCGTACACAGCTCAGGAAAGATTaGAGGAAACTAGGACCAAGTTGTATATCATTATATTCCTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: WTFLARRDRTQLRKD*RKLGPSCISLYSCV Trigger: CACACAGGAATATAATGATATACAACTTGGTCCTAGTTTCCTTCAATCTTTCCTGAGCTGTGTACGATCCCTCCGGGCCAGAAATGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS GCA 72 bp | GGCTTCACGGCCCGTTTTGGTGCCCCCATCTCCACCTaGAGTTGGGCAAGCTTGTTCAAGGCCTCTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: GFTARFGAPIST*SWASLFKASFW Trigger: CCAGAAAGAGGCCTTGAACAAGCTTGCCCAACTGCAGGTGGAGATGGGGGCACCAAAACGGGCCGTGAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS CCA 72 bp | ACGGCCCGTTTTGGTGCCCCCATCTCCACCTGCAGTTaGGCAAGCTTGTTCAAGGCCTCTTTCTGGGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: TARFGAPISTCS*ASLFKASFWVS Trigger: GGAGACCCAGAAAGAGGCCTTGAACAAGCTTGCCCAACTGCAGGTGGAGATGGGGGCACCAAAACGGGCCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS CAA 72 bp | CACGGCCCGTTTTGGTGCCCCCATCTCCACCTGCAGTaGGGCAAGCTTGTTCAAGGCCTCTTTCTGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: HGPFWCPHLHLQ*GKLVQGLFLGL Trigger: GAGACCCAGAAAGAGGCCTTGAACAAGCTTGCCCAACTGCAGGTGGAGATGGGGGCACCAAAACGGGCCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS CAA 72 bp | CTGGAGTATTGCTCAGGGGCCCATGGACTCGAAGGCTaGGAGGACTGTGAGGGTCCTGAGGGTCTTGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LEYCSGAHGLEG*EDCEGPEGLVS Trigger: GCTCACAAGACCCTCAGGACCCTCACAGTCCTCCAAGCCTTCGAGTCCATGGGCCCCTGAGCAATACTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000194597.2 |
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| CDS CAA 90 bp | TGGCAAAATCTGGAGTATTGCTCAGGGGCCCATGGACTCGAAGGCTaGGAGGACTGTGAGGGTCCTGAGGGTCTTGTGAGCTCAGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: WQNLEYCSGAHGLEG*EDCEGPEGLVSSAP Trigger: GGGGGCTGAGCTCACAAGACCCTCAGGACCCTCACAGTCCTCCAAGCCTTCGAGTCCATGGGCCCCTGAGCAATACTCCAGATTTTGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000194597.2 |
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| CDS GCA 72 bp | CTGTGTGGCTATGTCAGGCTTCACGGCCCGTTTTGGTaGCCCCATCTCCACCTGCAGTTGGGCAAGCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LCGYVRLHGPFW*PHLHLQLGKLV Trigger: AACAAGCTTGCCCAACTGCAGGTGGAGATGGGGGCACCAAAACGGGCCGTGAAGCCTGACATAGCCACACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS CCA 72 bp | TTCCTGTGTGGCTATGTCAGGCTTCACGGCCCGTTTTaGTGCCCCCATCTCCACCTGCAGTTGGGCAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: FLCGYVRLHGPF*CPHLHLQLGKL Trigger: AAGCTTGCCCAACTGCAGGTGGAGATGGGGGCACCAAAACGGGCCGTGAAGCCTGACATAGCCACACAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS CAA 72 bp | ATTCCTGTGTGGCTATGTCAGGCTTCACGGCCCGTTTaGGTGCCCCCATCTCCACCTGCAGTTGGGCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: IPVWLCQASRPV*VPPSPPAVGQA Trigger: AGCTTGCCCAACTGCAGGTGGAGATGGGGGCACCAAAACGGGCCGTGAAGCCTGACATAGCCACACAGGAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS CAA 90 bp | GTCAGGCTTCACGGCCCGTTTTGGTGCCCCCATCTCCACCTGCAGTaGGGCAAGCTTGTTCAAGGCCTCTTTCTGGGTCTCCTCACTTAT | + |
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Preference number: 6 (lower is better) Translates to: VRLHGPFWCPHLHLQ*GKLVQGLFLGLLTY Trigger: ATAAGTGAGGAGACCCAGAAAGAGGCCTTGAACAAGCTTGCCCAACTGCAGGTGGAGATGGGGGCACCAAAACGGGCCGTGAAGCCTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS CCA 72 bp | GCAGGCCACAGAGCAGGACAGCTAGCAGCACCCATCTaGCTCTTGTCAACTGTCTGCTCCATTCAGTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: AGHRAGQLAAPI*LLSTVCSIQWE Trigger: TTCCCACTGAATGGAGCAGACAGTTGACAAGAGCCAGATGGGTGCTGCTAGCTGTCCTGCTCTGTGGCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS CAA 90 bp | AGGTGCCAGGACCCTGGGGCCTCCAACAGTCTCCACAGTCGGCTCTaGTTCTCTTCTGTAAGTGCTTGGAAAGAGTCACTGGTCCCATTG | + |
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Preference number: 6 (lower is better) Translates to: RCQDPGASNSLHSRL*FSSVSAWKESLVPL Trigger: CAATGGGACCAGTGACTCTTTCCAAGCACTTACAGAAGAGAACAAGAGCCGACTGTGGAGACTGTTGGAGGCCCCAGGGTCCTGGCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS CAA 72 bp | GACCCTGGGGCCTCCAACAGTCTCCACAGTCGGCTCTaGTTCTCTTCTGTAAGTGCTTGGAAAGAGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: DPGASNSLHSRL*FSSVSAWKESL Trigger: CAGTGACTCTTTCCAAGCACTTACAGAAGAGAACAAGAGCCGACTGTGGAGACTGTTGGAGGCCCCAGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS TCA 72 bp | GGGGCCATTTCCTGCAGTTCGTCAATAGTAACCACATaGAAGAGCTTGTCCTGTGCCTGCTGCTGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GAISCSSSIVTT*KSLSCACCCCC Trigger: ACAGCAGCAGCAGCAGGCACAGGACAAGCTCTTTCATGTGGTTACTATTGACGAACTGCAGGAAATGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS CCA 72 bp | GGCAGGGGTGGTCGTTCTTTCAGTTTCCGTAGTTCCTaGATCAGTTCTCTGCGTGCCTCCTGGAATTTAGTG | + |
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Preference number: 6 (lower is better) Translates to: GRGGRSFSFRSS*ISSLRASWNLV Trigger: CACTAAATTCCAGGAGGCACGCAGAGAACTGATCCAGGAACTACGGAAACTGAAAGAACGACCACCCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS CAA 90 bp | TATCATTATATTCCTGTGTGGCTATGTCAGGCTTCACGGCCCGTTTaGGTGCCCCCATCTCCACCTGCAGTTGGGCAAGCTTGTTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: YHYIPVWLCQASRPV*VPPSPPAVGQACSR Trigger: CCTTGAACAAGCTTGCCCAACTGCAGGTGGAGATGGGGGCACCAAAACGGGCCGTGAAGCCTGACATAGCCACACAGGAATATAATGATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS TCA 72 bp | GGAGAAGAATGTCAAACTCCGGCTGGTCTATCTGGATaGTTGGTGTATGTGGAGGGGCTGGATGAGGTCGTA | + |
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Preference number: 6 (lower is better) Translates to: GEECQTPAGLSG*LVYVEGLDEVV Trigger: TACGACCTCATCCAGCCCCTCCACATACACCAATCATCCAGATAGACCAGCCGGAGTTTGACATTCTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS CCA 72 bp | ATGGTCCAGGAGCTCCATACACACAGGTGTCTCACATaGACAAGGACCACAGTTCCGGAAGATGTAAAACCA | + |
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Preference number: 6 (lower is better) Translates to: MVQELHTHRCLT*TRTTVPEDVKP Trigger: TGGTTTTACATCTTCCGGAACTGTGGTCCTTGTCCATGTGAGACACCTGTGTGTATGGAGCTCCTGGACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS CCA 72 bp | CGTCTGTTCCACACACTTCATCCATCGAGGGTAGGCTaGCTGCAGTTCGTCAATAGTAACCACATGAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: RLFHTLHPSRVG*LQFVNSNHMKE Trigger: CTCTTTCATGTGGTTACTATTGACGAACTGCAGCCAGCCTACCCTCGATGGATGAAGTGTGTGGAACAGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192118.2 |
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| CDS CAA 90 bp | CTCCAACAGTCTCCACAGTCGGCTCTTGTTCTCTTCTGTAAGTGCTaGGAAAGAGTCACTGGTCCCATTGGCTTTTTCACAGGCAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: LQQSPQSALVLFCKC*ERVTGPIGFFTGKA Trigger: AGCTTTGCCTGTGAAAAAGCCAATGGGACCAGTGACTCTTTCCAAGCACTTACAGAAGAGAACAAGAGCCGACTGTGGAGACTGTTGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS GCA 72 bp | CAGTCTCCACAGTCGGCTCTTGTTCTCTTCTGTAAGTaGTTGGAAAGAGTCACTGGTCCCATTGGCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: QSPQSALVLFCK*LERVTGPIGFF Trigger: GAAAAAGCCAATGGGACCAGTGACTCTTTCCAAGCACTTACAGAAGAGAACAAGAGCCGACTGTGGAGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS CAA 72 bp | AGCCTCAGATTTTGGTTGAAGTCCAAGGACGTCCAGTaGCCAGTGATGTTCCAGCCTCCAAGCTCTTCAATA | + |
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Preference number: 6 (lower is better) Translates to: SLRFWLKSKDVQ*PVMFQPPSSSI Trigger: TATTGAAGAGCTTGGAGGCTGGAACATCACTGGCAACTGGACGTCCTTGGACTTCAACCAAAATCTGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS GCA 72 bp | GACCAGACCCTGAAGCTTCAATGGCATCTGTGTCCATaGAGGAGTTATAAAATTGGAAGGCTTTCTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: DQTLKLQWHLCP*RSYKIGRLSPL Trigger: GAGAGGAGAAAGCCTTCCAATTTTATAACTCCTGCATGGACACAGATGCCATTGAAGCTTCAGGGTCTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS GCA 72 bp | ATATGCCTGGAATGCAATGGCTACGCCTCCTATGTCTaGAGCATTTTCCAGGAGTGTGTGAGAACCATTGAA | + |
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Preference number: 6 (lower is better) Translates to: ICLECNGYASYV*SIFQECVRTIE Trigger: TTCAATGGTTCTCACACACTCCTGGAAAATGCTGCAGACATAGGAGGCGTAGCCATTGCATTCCAGGCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS CAA 90 bp | CTCATCAGAAGCCTCAGATTTTGGTTGAAGTCCAAGGACGTCCAGTaGCCAGTGATGTTCCAGCCTCCAAGCTCTTCAATAATTTGTATG | + |
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Preference number: 6 (lower is better) Translates to: LIRSLRFWLKSKDVQ*PVMFQPPSSSIICM Trigger: CATACAAATTATTGAAGAGCTTGGAGGCTGGAACATCACTGGCAACTGGACGTCCTTGGACTTCAACCAAAATCTGAGGCTTCTGATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS CAA 90 bp | CTGGACATTTCTGGCCCGGAGGGATCGTACACAGCTCAGGAAAGATaGAAGGAAACTAGGACCAAGTTGTATATCATTATATTCCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: LDISGPEGSYTAQER*KETRTKLYIIIFLC Trigger: ACACAGGAATATAATGATATACAACTTGGTCCTAGTTTCCTTCAATCTTTCCTGAGCTGTGTACGATCCCTCCGGGCCAGAAATGTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS TCA 72 bp | AAGCTCTTCAATAATTTGTATGAGTGGACCAGACCCTaGAGCTTCAATGGCATCTGTGTCCATGCAGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: KLFNNLYEWTRP*SFNGICVHAGV Trigger: AACTCCTGCATGGACACAGATGCCATTGAAGCTTCAGGGTCTGGTCCACTCATACAAATTATTGAAGAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS TCA 72 bp | CTGGCCCGGAGGGATCGTACACAGCTCAGGAAAGATTaGAGGAAACTAGGACCAAGTTGTATATCATTATAT | + |
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Preference number: 6 (lower is better) Translates to: LARRDRTQLRKD*RKLGPSCISLY Trigger: ATATAATGATATACAACTTGGTCCTAGTTTCCTTCAATCTTTCCTGAGCTGTGTACGATCCCTCCGGGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS CAA 72 bp | TCTTCTGTAAGTGCTTGGAAAGAGTCACTGGTCCCATaGGCTTTTTCACAGGCAAAGCTGAAAAAGTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SSVSAWKESLVP*AFSQAKLKKSV Trigger: CACTGACTTTTTCAGCTTTGCCTGTGAAAAAGCCAATGGGACCAGTGACTCTTTCCAAGCACTTACAGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031899.14 |
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| CDS CAA 72 bp | TCTGGCCCGGAGGGATCGTACACAGCTCAGGAAAGATaGAAGGAAACTAGGACCAAGTTGTATATCATTATA | + |
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Preference number: 6 (lower is better) Translates to: SGPEGSYTAQER*KETRTKLYIII Trigger: TATAATGATATACAACTTGGTCCTAGTTTCCTTCAATCTTTCCTGAGCTGTGTACGATCCCTCCGGGCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS GCA 72 bp | TTATCTCAGCAAATAATTCCATGGCAGCACTTTGAATaGTTGGGCCAAAAGCTTCACGAACAAACAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LSQQIIPWQHFE*LGQKLHEQTEL Trigger: CAGCTCTGTTTGTTCGTGAAGCTTTTGGCCCAAGCATTCAAAGTGCTGCCATGGAATTATTTGCTGAGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS TCA 72 bp | TCCTTTATCTCAGCAAATAATTCCATGGCAGCACTTTaGATGCTTGGGCCAAAAGCTTCACGAACAAACAGA | + |
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Preference number: 6 (lower is better) Translates to: SFISANNSMAAL*MLGPKASRTNR Trigger: TCTGTTTGTTCGTGAAGCTTTTGGCCCAAGCATTCAAAGTGCTGCCATGGAATTATTTGCTGAGATAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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| CDS CAA 72 bp | ACAGCTCAGGAAAGATTGAAGGAAACTAGGACCAAGTaGTATATCATTATATTCCTGTGTGGCTATGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: TAQERLKETRTK*YIIIFLCGYVR Trigger: CCTGACATAGCCACACAGGAATATAATGATATACAACTTGGTCCTAGTTTCCTTCAATCTTTCCTGAGCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031899.14 ENSMUST00000192118.2 |
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