Pregenerated sensors for KEG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024694Ensembl transcript IDs: ENSMUST00000025598.10, ENSMUST00000138545.8, ENSMUST00000154822.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGAGCGCGCGGAAACAGGGTGTGAAGCTCAGCGAGGTGCACCTCTaGTCTCTAGAAACTCACACCATCCTAATGACAGTTCACTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: VSARKQGVKLSEVHL*SLETHTILMTVHFS Trigger: AGAGAAGTGAACTGTCATTAGGATGGTGTGAGTTTCTAGAGAGCAGAGGTGCACCTCGCTGAGCTTCACACCCTGTTTCCGCGCGCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| 3UTR CCA 90 bp | CCTTTTACAAATGGGTCCCAGGAATCACATTCAGGTTTCCAGGCTTaGCTGCAAGCACATTTACTTGTCTCTTTCCTAATAATTCTTACA | + |
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Preference number: 1 (lower is better) Translates to: PFTNGSQESHSGFQA*LQAHLLVSFLIILT Trigger: TGTAAGAATTATTAGGAAAGAGACAAGTAAATGTGCTTGCAGCCAAGCCTGGAAACCTGAATGTGATTCCTGGGACCCATTTGTAAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| 3UTR-3UTR GCA 90 bp | CCCATAAAAGCAAAACTACAGAAAGTCAGAGGAGGTATGCCTTGTGTGCAAGGGAGCGAGGTGCACCTCTaGTCTCTAGAAACTCACACC | + |
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Preference number: 2 (lower is better) Translates to: PIKAKLQKVRGGMPCVQGSEVHL*SLETHT Trigger: GGTGTGAGTTTCTAGAGAGCAGAGGTGCACCTCGCT...CCCTTGCACACAAGGCATACCTCCTCTGACTTTCTGTAGTTTTGCTTTTATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGAGGTATGCCTTGTGTGCAAGGGGAGTGCAGGATAGGTCACAAACTACTAGGTGGCCTTCTGCATaGCAAAGAATGGAGTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: QRRYALCARGVQDRSQTTRWPSA*QRMELR Trigger: TCTTAACTCCATTCTTTGGCATGCAGAAGGCCACCT...AGTAGTTTGTGACCTATCCTGCACTCCCCTTGCACACAAGGCATACCTCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| 3UTR CAA 90 bp | TCCTTTTACAAATGGGTCCCAGGAATCACATTCAGGTTTCCAGGCTaGGCTGCAAGCACATTTACTTGTCTCTTTCCTAATAATTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: SFYKWVPGITFRFPG*AASTFTCLFPNNSY Trigger: GTAAGAATTATTAGGAAAGAGACAAGTAAATGTGCTTGCAGCCAAGCCTGGAAACCTGAATGTGATTCCTGGGACCCATTTGTAAAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| 3UTR-3UTR CAA 90 bp | GCTCCATACCTGTGGCAGTCAGAGGGCAAGGTAATGGAGTTGATGCTCTCCTTTCAGAGGAGGTATGCCTaGTGTGCAAGGGGAGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: APYLWQSEGKVMELMLSFQRRYA*CARGVQ Trigger: CTGCACTCCCCTTGCACACAAGGCATACCTCCTCTG...AAAGGAGAGCATCAACTCCATTACCTTGCCCTCTGACTGCCACAGGTATGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| 3UTR GCA 72 bp | GCTGTAACAGGGGTGGAGGAGGAGAAGGTGGCCTTCTaGATGCCAAAGAATGGAGTTAAGAGCATGAACAAG | + |
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Preference number: 3 (lower is better) Translates to: AVTGVEEEKVAF*MPKNGVKSMNK Trigger: CTTGTTCATGCTCTTAACTCCATTCTTTGGCATGCAGAAGGCCACCTTCTCCTCCTCCACCCCTGTTACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| 3UTR-3UTR CAA 90 bp | GCTCCATACCTGTGGCAGTCAGAGGGCAAGGTAATGGAGTTGATGCTCTCCTTTGTTGCACCACACATATaGTGCATCTGTGTTTGCATA | + |
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Preference number: 3 (lower is better) Translates to: APYLWQSEGKVMELMLSFVAPHI*CICVCI Trigger: TATGCAAACACAGATGCACAATATGTGTGGTGCAAC...AAAGGAGAGCATCAACTCCATTACCTTGCCCTCTGACTGCCACAGGTATGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| 3UTR CCA 72 bp | GGCAAGGTAATGGAGTTGATGCTCTCCTTTTACAAATaGGTCCCAGGAATCACATTCAGGTTTCCAGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: GKVMELMLSFYK*VPGITFRFPGL Trigger: CAAGCCTGGAAACCTGAATGTGATTCCTGGGACCCATTTGTAAAAGGAGAGCATCAACTCCATTACCTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| 3UTR CCA 72 bp | TATTTATTTGTGTGTGCAAATACTGCTCCATACCTGTaGCAGTCAGAGGGCAAGGTAATGGAGTTGATGCTC | + |
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Preference number: 3 (lower is better) Translates to: YLFVCANTAPYL*QSEGKVMELML Trigger: GAGCATCAACTCCATTACCTTGCCCTCTGACTGCCACAGGTATGGAGCAGTATTTGCACACACAAATAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR TCA 90 bp | GCTCCATACCTGTGGCAGTCAGAGGGCAAGGTAATGGAGTTGATGCTCTCCTTTGAGCCAAGGAATTCCTaGCAGTGCTTGGGATCCTTT | + |
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Preference number: 4 (lower is better) Translates to: APYLWQSEGKVMELMLSFEPRNS*QCLGSF Trigger: AAAGGATCCCAAGCACTGTCAGGAATTCCTTGGCTC...AAAGGAGAGCATCAACTCCATTACCTTGCCCTCTGACTGCCACAGGTATGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR TCA 90 bp | CAGAGGAGGTATGCCTTGTGTGCAAGGGGAGTGCAGGATAGGTCACAAACTACTAAGCAACATGGTAAATaGGACTCTGGCGCCGGTACT | + |
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Preference number: 4 (lower is better) Translates to: QRRYALCARGVQDRSQTTKQHGK*DSGAGT Trigger: AGTACCGGCGCCAGAGTCTCATTTACCATGTTGCTT...AGTAGTTTGTGACCTATCCTGCACTCCCCTTGCACACAAGGCATACCTCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR TCA 90 bp | GTGGAGGAGGAGAAGGTGGCCTTCTGCATGCCAAAGAATGGAGTTAAGAGCATGATGGGTTTCCCTGATTaGTGTGGAAGACAGTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: VEEEKVAFCMPKNGVKSMMGFPD*CGRQSH Trigger: ATGGGACTGTCTTCCACATCAATCAGGGAAACCCAT...CATGCTCTTAACTCCATTCTTTGGCATGCAGAAGGCCACCTTCTCCTCCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR TCA 90 bp | TGTAACAGGGGTGGAGGAGGAGAAGGTGGCCTTCTGCATGCCAAAGAATGGAGTCCAGTGAGGCAAATTTaGATAACTGCTGGTCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: CNRGGGGEGGLLHAKEWSPVRQI*ITAGQE Trigger: CTCTTGACCAGCAGTTATTCAAATTTGCCTCACTGG...ACTCCATTCTTTGGCATGCAGAAGGCCACCTTCTCCTCCTCCACCCCTGTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR TCA 90 bp | CTCTCAGCCATTTCTCCGTCTACAAGCGCAGGCCCCTTCTCACCCTTTTCTAGCAAGCCAACCATTCTCTaGACAGTGAAGTTAGCCTTA | + |
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Preference number: 4 (lower is better) Translates to: LSAISPSTSAGPFSPFSSKPTIL*TVKLAL Trigger: TAAGGCTAACTTCACTGTTCAGAGAATGGTTGGCTT...GCTAGAAAAGGGTGAGAAGGGGCCTGCGCTTGTAGACGGAGAAATGGCTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR GCA 90 bp | GCTCCATACCTGTGGCAGTCAGAGGGCAAGGTAATGGAGTTGATGCTCTCCTTTGAATTCTCCAGAACCTaGAGTGCTTGGGAACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: APYLWQSEGKVMELMLSFEFSRT*SAWELC Trigger: ACAGAGTTCCCAAGCACTGCAGGTTCTGGAGAATTC...AAAGGAGAGCATCAACTCCATTACCTTGCCCTCTGACTGCCACAGGTATGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR CCA 90 bp | GTGGAGGAGGAGAAGGTGGCCTTCTGCATGCCAAAGAATGGAGTTAAGAGCATGAGAACCTGCAGTGCTTaGGAACTCTGTAAGCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: VEEEKVAFCMPKNGVKSMRTCSA*ELCKQN Trigger: GTTCTGCTTACAGAGTTCCCAAGCACTGCAGGTTCT...CATGCTCTTAACTCCATTCTTTGGCATGCAGAAGGCCACCTTCTCCTCCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR CCA 90 bp | CCAGCCCATAAAAGCAAAACTACAGAAAGTCAGAGGAGGTATGCCTTGTGTGCACTCAGTTCTCCAGTGTaGTCCATCAGGGTCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: PAHKSKTTESQRRYALCALSSPV*SIRVQD Trigger: GTCCTGGACCCTGATGGACCACACTGGAGAACTGAG...TGCACACAAGGCATACCTCCTCTGACTTTCTGTAGTTTTGCTTTTATGGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| 3UTR CAA 72 bp | CCATACCTGTGGCAGTCAGAGGGCAAGGTAATGGAGTaGATGCTCTCCTTTTACAAATGGGTCCCAGGAATC | + |
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Preference number: 4 (lower is better) Translates to: PYLWQSEGKVME*MLSFYKWVPGI Trigger: GATTCCTGGGACCCATTTGTAAAAGGAGAGCATCAACTCCATTACCTTGCCCTCTGACTGCCACAGGTATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR TCA 90 bp | GTGGAGGAGGAGAAGGTGGCCTTCTGCATGCCAAAGAATGGAGTTAAGAGCATGTTGAATGGGTTTCCCTaGTTGATGTGGAAGACAGTC | + |
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Preference number: 4 (lower is better) Translates to: VEEEKVAFCMPKNGVKSMLNGFP*LMWKTV Trigger: GACTGTCTTCCACATCAATCAGGGAAACCCATTCAA...CATGCTCTTAACTCCATTCTTTGGCATGCAGAAGGCCACCTTCTCCTCCTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR GCA 90 bp | GTGGAGGAGGAGAAGGTGGCCTTCTGCATGCCAAAGAATGGAGTTAAGAGCATGGCAAATTTGAATAACTaGTGGTCAAGAGGCGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: VEEEKVAFCMPKNGVKSMANLNN*WSRGVS Trigger: GCTCACGCCTCTTGACCAGCAGTTATTCAAATTTGC...CATGCTCTTAACTCCATTCTTTGGCATGCAGAAGGCCACCTTCTCCTCCTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR CCA 90 bp | TTTACAAATGGGTCCCAGGAATCACATTCAGGTTTCCAGGCTTGGCTGCAAGCAGGTACACAGTTCCACTaGTTCCAGGTACAAGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: FTNGSQESHSGFQAWLQAGTQFH*FQVQGK Trigger: CTTGCCTTGTACCTGGAACCAGTGGAACTGTGTACC...TGCTTGCAGCCAAGCCTGGAAACCTGAATGTGATTCCTGGGACCCATTTGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR GCA 90 bp | CCAGCCCATAAAAGCAAAACTACAGAAAGTCAGAGGAGGTATGCCTTGTGTGCAAAGGACTCAGGGAGGTaGTTCCTTAGGGAATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PAHKSKTTESQRRYALCAKDSGR*FLREFS Trigger: GGAGAATTCCCTAAGGAAGCACCTCCCTGAGTCCTT...TGCACACAAGGCATACCTCCTCTGACTTTCTGTAGTTTTGCTTTTATGGGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR GCA 90 bp | TTTACAAATGGGTCCCAGGAATCACATTCAGGTTTCCAGGCTTGGCTGCAAGCAGAGGCTATTCACCAGTaGAGCATGTGTAACATCCAG | + |
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Preference number: 4 (lower is better) Translates to: FTNGSQESHSGFQAWLQAEAIHQ*SMCNIQ Trigger: CTGGATGTTACACATGCTGCACTGGTGAATAGCCTC...TGCTTGCAGCCAAGCCTGGAAACCTGAATGTGATTCCTGGGACCCATTTGTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR GCA 90 bp | GTCAGAGGAGGTATGCCTTGTGTGCAAGGGGAGTGCAGGATAGGTCACAAACTAAGGAGCCAGTTTCTTTaGTGTTTGGCATACCATATA | + |
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Preference number: 4 (lower is better) Translates to: VRGGMPCVQGECRIGHKLRSQFL*CLAYHI Trigger: TATATGGTATGCCAAACAGCAAAGAAACTGGCTCCT...TAGTTTGTGACCTATCCTGCACTCCCCTTGCACACAAGGCATACCTCCTCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR TCA 90 bp | TTTACAAATGGGTCCCAGGAATCACATTCAGGTTTCCAGGCTTGGCTGCAAGCAAGATACAGCGTTCAATaGACTTCTGGCTCTTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: FTNGSQESHSGFQAWLQARYSVQ*TSGSSH Trigger: ATGAGAAGAGCCAGAAGTTCATTGAACGCTGTATCT...TGCTTGCAGCCAAGCCTGGAAACCTGAATGTGATTCCTGGGACCCATTTGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR CCA 90 bp | TACAAATGGGTCCCAGGAATCACATTCAGGTTTCCAGGCTTGGCTGCAAGCACAATTCCTGACAGTGCTTaGGATCCTTTGAATACACTA | + |
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Preference number: 4 (lower is better) Translates to: YKWVPGITFRFPGLAASTIPDSA*DPLNTL Trigger: TAGTGTATTCAAAGGATCCCAAGCACTGTCAGGAAT...TGTGCTTGCAGCCAAGCCTGGAAACCTGAATGTGATTCCTGGGACCCATTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR TCA 90 bp | CTCCAGCCCATAAAAGCAAAACTACAGAAAGTCAGAGGAGGTATGCCTTGTGTGTCTGACTGTGAACTTTaGATCTGCAAATGTTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LQPIKAKLQKVRGGMPCVSDCEL*ICKCCF Trigger: GAAACAACATTTGCAGATTCAAAGTTCACAGTCAGA...CACACAAGGCATACCTCCTCTGACTTTCTGTAGTTTTGCTTTTATGGGCTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR CAA 90 bp | CAGAGGAGGTATGCCTTGTGTGCAAGGGGAGTGCAGGATAGGTCACAAACTACTACAAGGCAAGAGGATTaGCCCCAGCAAGCCAACCAT | + |
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Preference number: 5 (lower is better) Translates to: QRRYALCARGVQDRSQTTTRQED*PQQANH Trigger: ATGGTTGGCTTGCTGGGGCAAATCCTCTTGCCTTGT...AGTAGTTTGTGACCTATCCTGCACTCCCCTTGCACACAAGGCATACCTCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS GCA 90 bp | AAAGTCTTGAGCTTGAATGGGTTTCCCTTTAAGGACTCAGGGAGGTaGTTCCTTAGGGAATTCTCCAGAACCTGCAGTGCTTGGGAACTC | + |
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Preference number: 5 (lower is better) Translates to: KVLSLNGFPFKDSGR*FLREFSRTCSAWEL Trigger: GAGTTCCCAAGCACTGCAGGTTCTGGAGAATTCCCTAAGGAAGCACCTCCCTGAGTCCTTAAAGGGAAACCCATTCAAGCTCAAGACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138545.8 ENSMUST00000154822.2 |
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| CDS-3UTR CAA 90 bp | TTACAAATGGGTCCCAGGAATCACATTCAGGTTTCCAGGCTTGGCTGCAAGCACTTGTCCACCAAAGTCTaGAGCTTGAATGGGTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: LQMGPRNHIQVSRLGCKHLSTKV*SLNGFP Trigger: GGGAAACCCATTCAAGCTCAAGACTTTGGTGGACAA...GTGCTTGCAGCCAAGCCTGGAAACCTGAATGTGATTCCTGGGACCCATTTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR CAA 90 bp | TTACAAATGGGTCCCAGGAATCACATTCAGGTTTCCAGGCTTGGCTGCAAGCACAAGGAGCCAGTTTCTTaGCTGTTTGGCATACCATAT | + |
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Preference number: 5 (lower is better) Translates to: LQMGPRNHIQVSRLGCKHKEPVS*LFGIPY Trigger: ATATGGTATGCCAAACAGCAAAGAAACTGGCTCCTT...GTGCTTGCAGCCAAGCCTGGAAACCTGAATGTGATTCCTGGGACCCATTTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR CAA 90 bp | GCTCCATACCTGTGGCAGTCAGAGGGCAAGGTAATGGAGTTGATGCTCTCCTTTCAGTTTCTTTGCTGTTaGGCATACCATATAGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: APYLWQSEGKVMELMLSFQFLCC*AYHIEK Trigger: TTTCTCTATATGGTATGCCAAACAGCAAAGAAACTG...AAAGGAGAGCATCAACTCCATTACCTTGCCCTCTGACTGCCACAGGTATGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS-3UTR CAA 90 bp | CTCCAGCCCATAAAAGCAAAACTACAGAAAGTCAGAGGAGGTATGCCTTGTGTGTCCAGTGAGGCAAATTaGAATAACTGCTGGTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: LQPIKAKLQKVRGGMPCVSSEAN*NNCWSR Trigger: TCTTGACCAGCAGTTATTCAAATTTGCCTCACTGGA...CACACAAGGCATACCTCCTCTGACTTTCTGTAGTTTTGCTTTTATGGGCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS GCA 72 bp | AGCTTGAATGGGTTTCCCTTTAAGGACTCAGGGAGGTaGTTCCTTAGGGAATTCTCCAGAACCTGCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SLNGFPFKDSGR*FLREFSRTCSA Trigger: AGCACTGCAGGTTCTGGAGAATTCCCTAAGGAAGCACCTCCCTGAGTCCTTAAAGGGAAACCCATTCAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138545.8 ENSMUST00000154822.2 |
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| CDS CAA 72 bp | CCCTCAGGCCCCATAATACAGAAGAGAGGCGTGAGCTaGTTACGGCTGACTACTAAGTTCTTTGCATCCATC | + |
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Preference number: 6 (lower is better) Translates to: PSGPIIQKRGVS*LRLTTKFFASI Trigger: GATGGATGCAAAGAACTTAGTAGTCAGCCGTAACAAGCTCACGCCTCTCTTCTGTATTATGGGGCCTGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154822.2 |
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| CDS TCA 72 bp | GGCAAGAGGATTTGCCCCAGCAAGCCAACCATTCTCTaGACAGTGAAGTTAGCCTTATCCACATGTGCATAC | + |
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Preference number: 6 (lower is better) Translates to: GKRICPSKPTIL*TVKLALSTCAY Trigger: GTATGCACATGTGGATAAGGCTAACTTCACTGTTCAGAGAATGGTTGGCTTGCTGGGGCAAATCCTCTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS CAA 90 bp | AGGCTATTCACCAGTGCAGCATGTGTAACATCCAGTGAGGCAAATTaGAATAACTGCTGGTCAAGAGGCGTGAGCTTGTTACGGCTGACT | + |
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Preference number: 6 (lower is better) Translates to: RLFTSAACVTSSEAN*NNCWSRGVSLLRLT Trigger: AGTCAGCCGTAACAAGCTCACGCCTCTTGACCAGCAGTTATTCAAATTTGCCTCACTGGATGTTACACATGCTGCACTGGTGAATAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025598.10 ENSMUST00000138545.8 |
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| CDS GCA 72 bp | GCATGTGTAACATCCAGTGAGGCAAATTTGAATAACTaGTGGTCAAGAGGCGTGAGCTTGTTACGGCTGACT | + |
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Preference number: 6 (lower is better) Translates to: ACVTSSEANLNN*WSRGVSLLRLT Trigger: AGTCAGCCGTAACAAGCTCACGCCTCTTGACCAGCAGTTATTCAAATTTGCCTCACTGGATGTTACACATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025598.10 ENSMUST00000138545.8 |
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| CDS CCA 72 bp | ATCAGGCCATTTGTCCACCAAAGTCTTGAGCTTGAATaGGTTTCCCTGATTGATGTGGAAGACAGTCCCATA | + |
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Preference number: 6 (lower is better) Translates to: IRPFVHQSLELE*VSLIDVEDSPI Trigger: TATGGGACTGTCTTCCACATCAATCAGGGAAACCCATTCAAGCTCAAGACTTTGGTGGACAAATGGCCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025598.10 |
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| CDS CCA 72 bp | TGTGTAACATCCAGTGAGGCAAATTTGAATAACTGCTaGTCAAGAGGCGTGAGCTTGTTACGGCTGACTACT | + |
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Preference number: 6 (lower is better) Translates to: CVTSSEANLNNC*SRGVSLLRLTT Trigger: AGTAGTCAGCCGTAACAAGCTCACGCCTCTTGACCAGCAGTTATTCAAATTTGCCTCACTGGATGTTACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025598.10 ENSMUST00000138545.8 |
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| CDS CAA 72 bp | ACCAGTGCAGCATGTGTAACATCCAGTGAGGCAAATTaGAATAACTGCTGGTCAAGAGGCGTGAGCTTGTTA | + |
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Preference number: 6 (lower is better) Translates to: TSAACVTSSEAN*NNCWSRGVSLL Trigger: TAACAAGCTCACGCCTCTTGACCAGCAGTTATTCAAATTTGCCTCACTGGATGTTACACATGCTGCACTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025598.10 ENSMUST00000138545.8 |
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| CDS CAA 72 bp | GCAAATTTGAATAACTGCTGGTCAAGAGGCGTGAGCTaGTTACGGCTGACTACTAAGTTCTTTGCATCCATC | + |
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Preference number: 6 (lower is better) Translates to: ANLNNCWSRGVS*LRLTTKFFASI Trigger: GATGGATGCAAAGAACTTAGTAGTCAGCCGTAACAAGCTCACGCCTCTTGACCAGCAGTTATTCAAATTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025598.10 ENSMUST00000138545.8 |
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| CDS GCA 72 bp | GTTCTTTGCATCCATCAAGGAAGGAGCCAGTTTCTTTaGTGTTTGGCATACCATATAGAGAAAGCACTGCTT | + |
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Preference number: 6 (lower is better) Translates to: VLCIHQGRSQFL*CLAYHIEKALL Trigger: AAGCAGTGCTTTCTCTATATGGTATGCCAAACAGCAAAGAAACTGGCTCCTTCCTTGATGGATGCAAAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025598.10 ENSMUST00000138545.8 ENSMUST00000154822.2 |
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