RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KEAP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000003308

Ensembl transcript IDs: ENSMUST00000049567.10, ENSMUST00000164812.8, ENSMUST00000193982.2, ENSMUST00000194542.6, ENSMUST00000216436.2

Found 423 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCAGGGCTCAGAGCCCAGAGGCTTCTCTGTGCCGGCTTGTCCCTTaGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTGGCCTCAGCTG +
Preference number: 1 (lower is better)
Translates to: FRAQSPEASLCRLVP*APVPEGASAPWPQL
Trigger: CAGCTGAGGCCAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGGCACAGAGAAGCCTCTGGGCTCTGAGCCCTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
3UTR CCA 90 bp TGGACGCTCCAGGGCTATGACAGATGGGCCCATGGATTTGAGTTCTaGTCTTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCC +
Preference number: 1 (lower is better)
Translates to: WTLQGYDRWAHGFEF*SSTRSFTRHPSRPS
Trigger: GGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAAGACCAGAACTCAAATCCATGGGCCCATCTGTCATAGCCCTGGAGCGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
3UTR GCA 90 bp CAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGACTTCTTCTaGCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGTTTTCT +
Preference number: 1 (lower is better)
Translates to: QGIPVALPGRRDDFF*RLFGPVFSVYALFS
Trigger: AGAAAACAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
3UTR CAA 90 bp GTTCAGGGCTCAGAGCCCAGAGGCTTCTCTGTGCCGGCTTGTCCCTaGGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTGGCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: VQGSEPRGFSVPACP*GPSSRGSLSPLASA
Trigger: AGCTGAGGCCAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGGCACAGAGAAGCCTCTGGGCTCTGAGCCCTGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
3UTR-3UTR TCA 90 bp TTCTGGTGGTGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACTCCTGGAAGAAGGGATaGCTTCTTCTGCCGCCTCTT +
Preference number: 2 (lower is better)
Translates to: FWWWEFKGFSPVRVPRPYSWKKG*LLLPPL
Trigger: AAGAGGCGGCAGAAGAAGTCATCCCTTCTTCCAGGA...GTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCACCACCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
3UTR-3UTR TCA 90 bp TCAGGATCTGCGTGTATTTCAATAGAAGAGCTGTCTCTCCCTGAGGGATTCCGATCCTGGAAGAAGGGATaGCTTCTTCTGCCGCCTCTT +
Preference number: 2 (lower is better)
Translates to: SGSACISIEELSLPEGFRSWKKG*LLLPPL
Trigger: AAGAGGCGGCAGAAGAAGTCATCCCTTCTTCCAGGA...TCGGAATCCCTCAGGGAGAGACAGCTCTTCTATTGAAATACACGCAGATCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
3UTR-3UTR CCA 90 bp TGTCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGCATGGATTTGAGTTCTaGTCTTCCACAAGGTCCTTT +
Preference number: 2 (lower is better)
Translates to: CPFFPCPLELITELQEPKHGFEF*SSTRSF
Trigger: AAAGGACCTTGTGGAAGACCAGAACTCAAATCCATG...CTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
3UTR-3UTR TCA 90 bp GTACAATGGCAAGCAGAGACAATAGACGGGTTTCAGATACCAGCCCCATCAGGAAGTACAGAGAAGCAGTaGTACACAGACTGTTTTTCT +
Preference number: 2 (lower is better)
Translates to: VQWQAETIDGFQIPAPSGSTEKQ*YTDCFS
Trigger: AGAAAAACAGTCTGTGTATCACTGCTTCTCTGTACT...TCCTGATGGGGCTGGTATCTGAAACCCGTCTATTGTCTCTGCTTGCCATTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000049567.10
ENSMUST00000194542.6
3UTR-3UTR TCA 90 bp GGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGTAGTACAGAGAAGCAGTaGTACACAGACTGTTTTTCT +
Preference number: 2 (lower is better)
Translates to: GMTSSAASSALCFLFMLCSTEKQ*YTDCFS
Trigger: AGAAAAACAGTCTGTGTATCACTGCTTCTCTGTACT...ACAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
3UTR-3UTR TCA 90 bp AGAGACAATAGACGGGTTTCAGATACCAGCCCCATCAGGATCTGCGTGTATTTCAGTACAGAGAAGCAGTaGTACACAGACTGTTTTTCT +
Preference number: 2 (lower is better)
Translates to: RDNRRVSDTSPIRICVYFSTEKQ*YTDCFS
Trigger: AGAAAAACAGTCTGTGTATCACTGCTTCTCTGTACT...GAAATACACGCAGATCCTGATGGGGCTGGTATCTGAAACCCGTCTATTGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000049567.10
ENSMUST00000194542.6
3UTR-3UTR CAA 90 bp CCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTGGCCTCAGCTGTCCCTTCCCTGTCCACTGGAATaGATCACCGAGTTGCAGGAA +
Preference number: 3 (lower is better)
Translates to: PWAPVPEGASAPWPQLSLPCPLE*ITELQE
Trigger: TTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGG...AAGGGACAGCTGAGGCCAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
3UTR-3UTR CAA 90 bp TTCTGGTGGTGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACGATGGGCCCATGGATTaGAGTTCTGGTCTTCCACAA +
Preference number: 3 (lower is better)
Translates to: FWWWEFKGFSPVRVPRPYDGPMD*SSGLPQ
Trigger: TTGTGGAAGACCAGAACTCAAATCCATGGGCCCATC...GTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCACCACCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
3UTR GCA 72 bp TCTGAACTGAAGGCCATCCCGGACGACGTGAGTCCCTaGCTCAAAATAAAGCTAAACACAGGAGGCCCCAGG +
Preference number: 3 (lower is better)
Translates to: SELKAIPDDVSP*LKIKLNTGGPR
Trigger: CCTGGGGCCTCCTGTGTTTAGCTTTATTTTGAGGCAGGGACTCACGTCGTCCGGGATGGCCTTCAGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049567.10
ENSMUST00000194542.6
3UTR GCA 72 bp CCAGTCGCCCTTCCTGGAAGAAGGGATGACTTCTTCTaGCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCT +
Preference number: 3 (lower is better)
Translates to: PVALPGRRDDFF*RLFGPVFSVYA
Trigger: AGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCCTTCTTCCAGGAAGGGCGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
3UTR CCA 72 bp CAGGGCTATGACAGATGGGCCCATGGATTTGAGTTCTaGTCTTCCACAAGGTCCTTTACAAGGCATCCCAGT +
Preference number: 3 (lower is better)
Translates to: QGYDRWAHGFEF*SSTRSFTRHPS
Trigger: ACTGGGATGCCTTGTAAAGGACCTTGTGGAAGACCAGAACTCAAATCCATGGGCCCATCTGTCATAGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
3UTR-3UTR CAA 90 bp ACAGGGTTATTTAACAAAATAACTGTTCAGGGCTCAGAGCCCAGAGGCTTCTCTCCCTGTCCACTGGAATaGATCACCGAGTTGCAGGAA +
Preference number: 3 (lower is better)
Translates to: TGLFNKITVQGSEPRGFSPCPLE*ITELQE
Trigger: TTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGG...AGAGAAGCCTCTGGGCTCTGAGCCCTGAACAGTTATTTTGTTAAATAACCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp CCGGCTTGTCCCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTGGCCTCAACCCACCACGCAGCCTaGCAGCCCACTGCGCGGCAC +
Preference number: 4 (lower is better)
Translates to: PACPLGPSSRGSLSPLASTHHAA*QPTARH
Trigger: GTGCCGCGCAGTGGGCTGGCAGGCTGCGTGGTGGGT...TGAGGCCAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp GGCTTCTCTGTGCCGGCTTGTCCCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCACCCACCACGCAGCCTaGCAGCCCACTGCGCGGCAC +
Preference number: 4 (lower is better)
Translates to: GFSVPACPLGPSSRGSLSTHHAA*QPTARH
Trigger: GTGCCGCGCAGTGGGCTGGCAGGCTGCGTGGTGGGT...GCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGGCACAGAGAAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp CCGGCTTGTCCCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTGGCCTCACTGGGGTCCAGCTGCTaGACGAGGAAGTCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PACPLGPSSRGSLSPLASLGSSC*TRKSLQ
Trigger: CTGCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAG...TGAGGCCAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp CCGGCTTGTCCCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTGGCCTCATTCTGCAGCTGCGTCTaGAGGAAGCGCGGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: PACPLGPSSRGSLSPLASFCSCV*RKRGVS
Trigger: GCTCACGCCGCGCTTCCTGCAGACGCAGCTGCAGAA...TGAGGCCAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp TGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCACGCGCGGCAGGGCACTaGCTGCGTGGGCTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: WEFKGFSPVRVPRPYPIPRAAGH*LRGLVQ
Trigger: CTGCACAAGCCCACGCAGGCAGTGCCCTGCCGCGCG...TGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp CAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGAACCCACCACGCAGCCTaGCAGCCCACTGCGCGGCAC +
Preference number: 4 (lower is better)
Translates to: QGLLTCEGAPPIPHPRLGTHHAA*QPTARH
Trigger: GTGCCGCGCAGTGGGCTGGCAGGCTGCGTGGTGGGT...TCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GGGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACAGACCACACCCACCCCGCTaGGGCCAGATGTCATGCGGG +
Preference number: 4 (lower is better)
Translates to: GCPAHTPSQTWTLQGYDRPHPPR*GQMSCG
Trigger: CCCGCATGACATCTGGCCGCAGCGGGGTGGGTGTGG...TCTGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp CCGGCTTGTCCCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTGGCCTCATCCACGCTGCTGTGGTaGATGCAGCCGTGGGAACCC +
Preference number: 4 (lower is better)
Translates to: PACPLGPSSRGSLSPLASSTLLW*MQPWEP
Trigger: GGGTTCCCACGGCTGCATCCACCACAGCAGCGTGGA...TGAGGCCAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp GGGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACAGACGAGGGCGTCACCTCTaGCTTGCACTCCGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GCPAHTPSQTWTLQGYDRRGRHL*LALRGG
Trigger: GCCTCCACGGAGTGCAAGGCAGAGGTGACGCCCTCG...TCTGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp CCGGCTTGTCCCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTGGCCTCAGCCTGCGTGGGCTTGTaGAGCGTGAGCTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: PACPLGPSSRGSLSPLASACVGL*SVSSWN
Trigger: ATTCCAGGAGCTCACGCTGCACAAGCCCACGCAGGC...TGAGGCCAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp TGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCACGGCAGGGCACTGCCTaGGTGGGCTTGTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: WEFKGFSPVRVPRPYPIPRQGTA*VGLCSV
Trigger: CACGCTGCACAAGCCCACGCAGGCAGTGCCCTGCCG...TGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp GGCTTCTCTGTGCCGGCTTGTCCCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCTCCACGCTGCTGTGGTaGATGCAGCCGTGGGAACCC +
Preference number: 4 (lower is better)
Translates to: GFSVPACPLGPSSRGSLSSTLLW*MQPWEP
Trigger: GGGTTCCCACGGCTGCATCCACCACAGCAGCGTGGA...GCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGGCACAGAGAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
3UTR CAA 72 bp TCAGAGCCCAGAGGCTTCTCTGTGCCGGCTTGTCCCTaGGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SEPRGFSVPACP*GPSSRGSLSPL
Trigger: CAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGGCACAGAGAAGCCTCTGGGCTCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp GGGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACAGACTGGGGTCCAGCTGCTaGACGAGGAAGTCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GCPAHTPSQTWTLQGYDRLGSSC*TRKSLQ
Trigger: CTGCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAG...TCTGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp GGCTTCTCTGTGCCGGCTTGTCCCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCTGCCAATGGCGTTGCTaGGGTCCAGCTGCTGCACGA +
Preference number: 4 (lower is better)
Translates to: GFSVPACPLGPSSRGSLSCQWRC*GPAAAR
Trigger: TCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCA...GCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGGCACAGAGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp CCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTGGCCTCAGCTGTCCCTTCCCGATGCGGTTGCGTaGCACGCTCATAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: PWAPVPEGASAPWPQLSLPDAVA*HAHRGT
Trigger: TGTGCCTCTATGAGCGTGCCACGCAACCGCATCGGG...AAGGGACAGCTGAGGCCAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp GGCTTCTCTGTGCCGGCTTGTCCCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCCTCTCCACGCTGCTGTaGTGGATGCAGCCGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GFSVPACPLGPSSRGSLSLSTLL*WMQPWE
Trigger: TTCCCACGGCTGCATCCACCACAGCAGCGTGGAGAG...GCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGGCACAGAGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp GGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACAGATCATACAGCAAGCGGTTaGGCACTGCCACGCCCACGC +
Preference number: 4 (lower is better)
Translates to: GAPPIPHPRLGRSRAMTDHTASG*ALPRPR
Trigger: GCGTGGGCGTGGCAGTGCTCAACCGCTTGCTGTATG...ATCTGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGAGTTCGGTTACCGTCCTaGGAGGGCGTCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GVQGLLTCEGAPPIPHPRVRLPS*EGVTSA
Trigger: GGCAGAGGTGACGCCCTCGCAGGACGGTAACCGAAC...TCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCATGGACACCACCTCCATaGCCTGCTCCCGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: WEFKGFSPVRVPRPYPIPWTPPP*PAPEAR
Trigger: ACGGGCTTCGGGAGCAGGGCATGGAGGTGGTGTCCA...TGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp CCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTGGCCTCAGCTGTCCCTTTCAGTGCAGCCGATCTaGTCCGCGAAGTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: PWAPVPEGASAPWPQLSLSVQPI*SAKLAM
Trigger: CATCGCCAACTTCGCGGAGCAGATCGGCTGCACTGA...AAGGGACAGCTGAGGCCAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp GGCTTCTCTGTGCCGGCTTGTCCCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCAGTTGGCGATGCCAATaGCGTTGCTGGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GFSVPACPLGPSSRGSLSSWRCQ*RCWGPA
Trigger: AGCTGGACCCCAGCAACGCCATTGGCATCGCCAACT...GCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGGCACAGAGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp CAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGATACTCCCGGGCACGCTaGTGCAGTTCAGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QGLLTCEGAPPIPHPRLGYSRAR*CSSVQP
Trigger: CGGCTGCACTGAACTGCACCAGCGTGCCCGGGAGTA...TCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp CCGGCTTGTCCCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTGGCCTCAATGAGCGTGGCCAGCTaGCAGTGTGACAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: PACPLGPSSRGSLSPLASMSVAS*QCDRLK
Trigger: CTTCAACCTGTCACACTGCCAGCTGGCCACGCTCAT...TGAGGCCAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp GGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGAAGATGTGGCCATCTATaGCCCCCACCCCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: GVQGLLTCEGAPPIPHPRRCGHL*PPPRCG
Trigger: ACCGCATCGGGGTGGGGGTCATAGATGGCCACATCT...TCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGAGCCCCGTTCATCACGTaGAGGACACACTTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: GVQGLLTCEGAPPIPHPRAPFIT*RTHFSP
Trigger: GGGCGAGAAGTGTGTCCTGCACGTGATGAACGGGGC...TCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCATTGCTGGGGTCCAGCTaGTGCACGAGGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: WEFKGFSPVRVPRPYPIPLLGSS*CTRKSL
Trigger: CAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAA...TGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCATCACACTTCTGCAGCTaGGTCTGCAGGAAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: WEFKGFSPVRVPRPYPIPSHFCS*VCRKRG
Trigger: GCCGCGCTTCCTGCAGACGCAGCTGCAGAAGTGTGA...TGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp GGGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACAGAGGTGGATGCCTTCGATaGACACCACCTCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: GCPAHTPSQTWTLQGYDRGGCLR*TPPPCP
Trigger: AGGGCATGGAGGTGGTGTCCATCGAAGGCATCCACC...TCTGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp TGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCATCTCGCCCACGGAGATaGAGGCCGTGTAGGCGAACT +
Preference number: 4 (lower is better)
Translates to: WEFKGFSPVRVPRPYPIPSRPRR*RPCRRT
Trigger: AGTTCGCCTACACGGCCTCCATCTCCGTGGGCGAGA...TGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp CAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGATCTCGCCCACGGAGATaGAGGCCGTGTAGGCGAACT +
Preference number: 4 (lower is better)
Translates to: QGLLTCEGAPPIPHPRLGSRPRR*RPCRRT
Trigger: AGTTCGCCTACACGGCCTCCATCTCCGTGGGCGAGA...TCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp TGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCACAGTCGATGCACGCGTaGAACACCTCGGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: WEFKGFSPVRVPRPYPIPQSMHA*NTSDSQ
Trigger: CTGCGAGTCCGAGGTGTTCCACGCGTGCATCGACTG...TGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp TGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAAGCAGTCCAGGGCGCTaGAGTCAGTGTTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: WEFKGFSPVRVPRPYPIPSSPGR*SQCCHP
Trigger: CGGATGGCAACACTGACTCCAGCGCCCTGGACTGCT...TGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp CAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGACCCGATGCGGTTGCGTaGCACGCTCATAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: QGLLTCEGAPPIPHPRLGPDAVA*HAHRGT
Trigger: TGTGCCTCTATGAGCGTGCCACGCAACCGCATCGGG...TCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp CAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGACTCTCCACGCTGCTGTaGTGGATGCAGCCGTGGGAA +
Preference number: 4 (lower is better)
Translates to: QGLLTCEGAPPIPHPRLGLSTLL*WMQPWE
Trigger: TTCCCACGGCTGCATCCACCACAGCAGCGTGGAGAG...TCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp CAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGAGGCGAAGCTCGTTCATaGCGCCAAAAGCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QGLLTCEGAPPIPHPRLGGEARS*RQKPAW
Trigger: CCAAGCAGGCTTTTGGCGTCATGAACGAGCTTCGCC...TCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGAGGCGAAGCTCGTTCATaGCGCCAAAAGCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GVQGLLTCEGAPPIPHPRGEARS*RQKPAW
Trigger: CCAAGCAGGCTTTTGGCGTCATGAACGAGCTTCGCC...TCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACAGATTCAGTGCAGCCGATCTaGTCCGCGAAGTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: GAPPIPHPRLGRSRAMTDSVQPI*SAKLAM
Trigger: CATCGCCAACTTCGCGGAGCAGATCGGCTGCACTGA...ATCTGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GGGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACAGATTGAAGAACTCCTCCTaGTTGGCCACCTCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: GCPAHTPSQTWTLQGYDRLKNSS*LATSPK
Trigger: CTTCGGGGAGGTGGCCAAGCAGGAGGAGTTCTTCAA...TCTGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp GTCTTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGCACGGCCCGCAGCAGTaGCTGCACGTAGAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: VFHKVLYKASQSPFLEEGHGPQQ*LHVEAP
Trigger: CGGCGCTTCTACGTGCAGGCACTGCTGCGGGCCGTG...CCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GGCTTCTCTGTGCCGGCTTGTCCCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCAGGATCTCACACTTCTaGAGCTGCGTCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GFSVPACPLGPSSRGSLSRISHF*SCVCRK
Trigger: CTTCCTGCAGACGCAGCTGCAGAAGTGTGAGATCCT...GCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGGCACAGAGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp GTCTTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGCGGCAGGGCACTGCCTaGGTGGGCTTGTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: VFHKVLYKASQSPFLEEGRQGTA*VGLCSV
Trigger: CACGCTGCACAAGCCCACGCAGGCAGTGCCCTGCCG...CCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GGGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACAGACGCTGGAGTCAGTGTTaGCATCCGGAGAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: GCPAHTPSQTWTLQGYDRRWSQC*HPESCC
Trigger: GCAACAACTCTCCGGATGGCAACACTGACTCCAGCG...TCTGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp CCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTGGCCTCAGCTGTCCCTTCCCATCGTAGCCCCCTaGTGCATAGATACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: PWAPVPEGASAPWPQLSLPIVAP*CIDTVV
Trigger: CACAACTGTATCTATGCAGCAGGGGGCTACGATGGG...AAGGGACAGCTGAGGCCAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp TTCTGGTGGTGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACTGCCAATGGCGTTGCTaGGGTCCAGCTGCTGCACGA +
Preference number: 4 (lower is better)
Translates to: FWWWEFKGFSPVRVPRPYCQWRC*GPAAAR
Trigger: TCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCA...GTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCACCACCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp TTCTGGTGGTGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACAGCAGTCCAGGGCGCTaGAGTCAGTGTTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: FWWWEFKGFSPVRVPRPYSSPGR*SQCCHP
Trigger: CGGATGGCAACACTGACTCCAGCGCCCTGGACTGCT...GTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCACCACCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp GGGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACAGACCACTTTGTGAGCCATaGATTGGGCAGCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: GCPAHTPSQTWTLQGYDRPLCEP*IGQLGC
Trigger: ACATCCCAGCTGCCCAATTCATGGCTCACAAAGTGG...TCTGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACATGTCAATCTGGTACATaGCCGCCCCGTTCATCACGT +
Preference number: 4 (lower is better)
Translates to: EGAPPIPHPRLGRSRAMTCQSGT*PPRSSR
Trigger: ACGTGATGAACGGGGCGGTCATGTACCAGATTGACA...TGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp CAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGACTTCCGGCAGGGCACTGCCTaGGTGGGCTTGTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: QGPLQGIPVALPGRRDDFRQGTA*VGLCSV
Trigger: CACGCTGCACAAGCCCACGCAGGCAGTGCCCTGCCG...GAAGTCATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACAGATCATATCTCTCCACGCTaGTGTGGTGGATGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: GAPPIPHPRLGRSRAMTDHISPR*CGGCSR
Trigger: ACGGCTGCATCCACCACAGCAGCGTGGAGAGATATG...ATCTGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGACATATCTCTCCACGCTaGTGTGGTGGATGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: GVQGLLTCEGAPPIPHPRHISPR*CGGCSR
Trigger: ACGGCTGCATCCACCACAGCAGCGTGGAGAGATATG...TCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GGGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACAGACCCATCGTAGCCCCCTaGTGCATAGATACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: GCPAHTPSQTWTLQGYDRPIVAP*CIDTVV
Trigger: CACAACTGTATCTATGCAGCAGGGGGCTACGATGGG...TCTGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGCCACACCCACCCCGCTaGGGCCAGATGTCATGCGGG +
Preference number: 4 (lower is better)
Translates to: FHKVLYKASQSPFLEEGMPHPPR*GQMSCG
Trigger: CCCGCATGACATCTGGCCGCAGCGGGGTGGGTGTGG...CATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp TGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAACCACTGGTTGGTCATaGGGTTGTAGCAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: WEFKGFSPVRVPRPYPIPTTGWS*GCSSPG
Trigger: CCCTGGACTGCTACAACCCCATGACCAACCAGTGGT...TGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGACCACTTTGTGAGCCATaGATTGGGCAGCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: GVQGLLTCEGAPPIPHPRPLCEP*IGQLGC
Trigger: ACATCCCAGCTGCCCAATTCATGGCTCACAAAGTGG...TCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACAGATCCACTTTGTGAGCCATaGATTGGGCAGCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: GAPPIPHPRLGRSRAMTDPLCEP*IGQLGC
Trigger: ACATCCCAGCTGCCCAATTCATGGCTCACAAAGTGG...ATCTGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp TTCTGGTGGTGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACGCCAGCACCACTTTGTaGGCCATGAATTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: FWWWEFKGFSPVRVPRPYASTTL*AMNWAA
Trigger: AGCTGCCCAATTCATGGCTCACAAAGTGGTGCTGGC...GTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCACCACCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp CAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGACTTCCCCAGCGCACTACGGTaGTGCCTCATGGGGGCTACG +
Preference number: 4 (lower is better)
Translates to: QGPLQGIPVALPGRRDDFPSALR*CLMGAT
Trigger: CGTAGCCCCCATGAGGCATCACCGTAGTGCGCTGGG...GAAGTCATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GTCTTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGGTTCGGTTACCGTCCTaGGAGGGCGTCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VFHKVLYKASQSPFLEEGVRLPS*EGVTSA
Trigger: GGCAGAGGTGACGCCCTCGCAGGACGGTAACCGAAC...CCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TCTGCGTGTATTTCAATAGAAGAGCTGTCTCTCCCTGAGGGATTCCGACCGCCCGCACCAGGTAGTCCTTaGAGCGCGCGTCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SACISIEELSLPEGFRPPAPGSP*SARRPA
Trigger: TGCAGGCCGACGCGCGCTGCAAGGACTACCTGGTGC...GGGCGGTCGGAATCCCTCAGGGAGAGACAGCTCTTCTATTGAAATACACGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp AGAAGGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTCGCGCGGCAGGGCACTaGCTGCGTGGGCTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: RRDDFFCRLFGPVFSVYARAAGH*LRGLVQ
Trigger: CTGCACAAGCCCACGCAGGCAGTGCCCTGCCGCGCG...AGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp TTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGCATACAGCAAGCGGTTaGGCACTGCCACGCCCACGC +
Preference number: 4 (lower is better)
Translates to: FHKVLYKASQSPFLEEGMHTASG*ALPRPR
Trigger: GCGTGGGCGTGGCAGTGCTCAACCGCTTGCTGTATG...CATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGGTTCGGTTACCGTCCTaGGAGGGCGTCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: FHKVLYKASQSPFLEEGMVRLPS*EGVTSA
Trigger: GGCAGAGGTGACGCCCTCGCAGGACGGTAACCGAAC...CATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp CAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGACTTCGTTCGGTTACCGTCCTaGGAGGGCGTCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QGPLQGIPVALPGRRDDFVRLPS*EGVTSA
Trigger: GGCAGAGGTGACGCCCTCGCAGGACGGTAACCGAAC...GAAGTCATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp CAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGACTTCCTGGGGTCCAGCTGCTaGACGAGGAAGTCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QGPLQGIPVALPGRRDDFLGSSC*TRKSLQ
Trigger: CTGCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAG...GAAGTCATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GTCTTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGCCGCGAAGTTGGCGATaGCAATGGCGTTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: VFHKVLYKASQSPFLEEGPRSWR*QWRCWG
Trigger: ACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGG...CCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGTCACGGCCCGCAGCAGTaGCTGCACGTAGAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: GMTSSAASSALCFLFMLCHGPQQ*LHVEAP
Trigger: CGGCGCTTCTACGTGCAGGCACTGCTGCGGGCCGTG...ACAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TGTCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGGCACCAGGTAGTCCTTaGAGCGCGCGTCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CPFFPCPLELITELQEPKAPGSP*SARRPA
Trigger: TGCAGGCCGACGCGCGCTGCAAGGACTACCTGGTGC...CTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp CAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGAATCGTAGCCCCCTGCTaGATAGATACAGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: QGLLTCEGAPPIPHPRLGIVAPC*IDTVVQ
Trigger: CTGCACAACTGTATCTATGCAGCAGGGGGCTACGAT...TCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp CAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGACTTCTACTCCCGGGCACGCTaGTGCAGTTCAGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QGPLQGIPVALPGRRDDFYSRAR*CSSVQP
Trigger: CGGCTGCACTGAACTGCACCAGCGTGCCCGGGAGTA...GAAGTCATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp AGAAGGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTCCCAGCGCACTACGGTaGTGCCTCATGGGGGCTACG +
Preference number: 4 (lower is better)
Translates to: RRDDFFCRLFGPVFSVYAPSALR*CLMGAT
Trigger: CGTAGCCCCCATGAGGCATCACCGTAGTGCGCTGGG...AGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGCGAGGGCGTCACCTCTaGCTTGCACTCCGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RDDFFCRLFGPVFSVYALRGRHL*LALRGG
Trigger: GCCTCCACGGAGTGCAAGGCAGAGGTGACGCCCTCG...CAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TCTGCGTGTATTTCAATAGAAGAGCTGTCTCTCCCTGAGGGATTCCGACCGCCCGCCCCGTTCATCACGTaGAGGACACACTTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: SACISIEELSLPEGFRPPAPFIT*RTHFSP
Trigger: GGGCGAGAAGTGTGTCCTGCACGTGATGAACGGGGC...GGGCGGTCGGAATCCCTCAGGGAGAGACAGCTCTTCTATTGAAATACACGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp TTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGCCGCGAAGTTGGCGATaGCAATGGCGTTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: FHKVLYKASQSPFLEEGMPRSWR*QWRCWG
Trigger: ACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGG...CATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGAGACAATAGACGGGTTTCAGATACCAGCCCCATCAGGATCTGCGTGTATTTCCACGGCCCGCAGCAGTaGCTGCACGTAGAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: RDNRRVSDTSPIRICVYFHGPQQ*LHVEAP
Trigger: CGGCGCTTCTACGTGCAGGCACTGCTGCGGGCCGTG...GAAATACACGCAGATCCTGATGGGGCTGGTATCTGAAACCCGTCTATTGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049567.10
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp CAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGACTTCTCACACTTCTGCAGCTaGGTCTGCAGGAAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: QGPLQGIPVALPGRRDDFSHFCS*VCRKRG
Trigger: GCCGCGCTTCCTGCAGACGCAGCTGCAGAAGTGTGA...GAAGTCATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGAAGGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTGCACCAGGTAGTCCTTaGAGCGCGCGTCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RRDDFFCRLFGPVFSVYAAPGSP*SARRPA
Trigger: TGCAGGCCGACGCGCGCTGCAAGGACTACCTGGTGC...AGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GCTTCTAATGCCCTGAAACTGACAGACAACTGTGTGTCCCACAAGAAGCAAGATCGCGCGGCAGGGCACTaGCTGCGTGGGCTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ASNALKLTDNCVSHKKQDRAAGH*LRGLVQ
Trigger: CTGCACAAGCCCACGCAGGCAGTGCCCTGCCGCGCG...ATCTTGCTTCTTGTGGGACACACAGTTGTCTGTCAGTTTCAGGGCATTAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049567.10
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp TTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGTGCCAATGGCGTTGCTaGGGTCCAGCTGCTGCACGA +
Preference number: 4 (lower is better)
Translates to: FHKVLYKASQSPFLEEGMCQWRC*GPAAAR
Trigger: TCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCA...CATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp GTCTTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGAGTTGGCGATGCCAATaGCGTTGCTGGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VFHKVLYKASQSPFLEEGSWRCQ*RCWGPA
Trigger: AGCTGGACCCCAGCAACGCCATTGGCATCGCCAACT...CCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp TCTGCGTGTATTTCAATAGAAGAGCTGTCTCTCCCTGAGGGATTCCGACCGCCCAGCAGTCCAGGGCGCTaGAGTCAGTGTTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: SACISIEELSLPEGFRPPSSPGR*SQCCHP
Trigger: CGGATGGCAACACTGACTCCAGCGCCCTGGACTGCT...GGGCGGTCGGAATCCCTCAGGGAGAGACAGCTCTTCTATTGAAATACACGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp TTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGCCCGATGCGGTTGCGTaGCACGCTCATAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: FHKVLYKASQSPFLEEGMPDAVA*HAHRGT
Trigger: TGTGCCTCTATGAGCGTGCCACGCAACCGCATCGGG...CATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp GAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACACCACTCATTCCTCTCTaGATAGTAACATTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: EGAPPIPHPRLGRSRAMTPLIPL*IVTFCG
Trigger: TCCGCAGAATGTTACTATCCAGAGAGGAATGAGTGG...TGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GTCTTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGGGCAGTGTGACAGGTTaGAGAACTCCTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: VFHKVLYKASQSPFLEEGGSVTG*RTPPAW
Trigger: CCAAGCAGGAGGAGTTCTTCAACCTGTCACACTGCC...CCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp TCTGCGTGTATTTCAATAGAAGAGCTGTCTCTCCCTGAGGGATTCCGACCGCCCAGGCCTCCAGGTAGCTaGGCGACTGTCGGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: SACISIEELSLPEGFRPPRPPGS*ATVGSN
Trigger: GTTACTTCCGACAGTCGCTCAGCTACCTGGAGGCCT...GGGCGGTCGGAATCCCTCAGGGAGAGACAGCTCTTCTATTGAAATACACGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp AGGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGCATACAGCAAGCGGTTaGGCACTGCCACGCCCACGC +
Preference number: 4 (lower is better)
Translates to: RDDFFCRLFGPVFSVYALHTASG*ALPRPR
Trigger: GCGTGGGCGTGGCAGTGCTCAACCGCTTGCTGTATG...CAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TGTCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGTTGCTGGGGTCCAGCTaGTGCACGAGGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: CPFFPCPLELITELQEPKLLGSS*CTRKSL
Trigger: CAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAA...CTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp GGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGTTTCTGCAGCTGCGTCTaGAGGAAGCGCGGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: GMTSSAASSALCFLFMLCFCSCV*RKRGVS
Trigger: GCTCACGCCGCGCTTCCTGCAGACGCAGCTGCAGAA...ACAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGAACAGCGCGCGTCGGCCTaGAGGATCTCACACTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLLPLSTGIDHRVAGTKEQRASA*RISHFC
Trigger: GCAGAAGTGTGAGATCCTGCAGGCCGACGCGCGCTG...TTCTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAACGCGCGGCAGGGCACTaGCTGCGTGGGCTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQRAAGH*LRGLVQ
Trigger: CTGCACAAGCCCACGCAGGCAGTGCCCTGCCGCGCG...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAACCCACCACGCAGCCTaGCAGCCCACTGCGCGGCAC +
Preference number: 4 (lower is better)
Translates to: VQRSSDTQTVFLSCCQCSTHHAA*QPTARH
Trigger: GTGCCGCGCAGTGGGCTGGCAGGCTGCGTGGTGGGT...TGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGACCCACCACGCAGCCTaGCAGCCCACTGCGCGGCAC +
Preference number: 4 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQTHHAA*QPTARH
Trigger: GTGCCGCGCAGTGGGCTGGCAGGCTGCGTGGTGGGT...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACATGGATAGTAACATTCTaGGGAGTTAAGCCGGTTAGT +
Preference number: 4 (lower is better)
Translates to: EGAPPIPHPRLGRSRAMTWIVTF*GVKPVS
Trigger: ACTAACCGGCTTAACTCCGCAGAATGTTACTATCCA...TGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp TCTGCGTGTATTTCAATAGAAGAGCTGTCTCTCCCTGAGGGATTCCGACCGCCCAGTTGGCGATGCCAATaGCGTTGCTGGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SACISIEELSLPEGFRPPSWRCQ*RCWGPA
Trigger: AGCTGGACCCCAGCAACGCCATTGGCATCGCCAACT...GGGCGGTCGGAATCCCTCAGGGAGAGACAGCTCTTCTATTGAAATACACGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp AGGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGTACTCCCGGGCACGCTaGTGCAGTTCAGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RDDFFCRLFGPVFSVYALYSRAR*CSSVQP
Trigger: CGGCTGCACTGAACTGCACCAGCGTGCCCGGGAGTA...CAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp TGTCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGCAGTCGATGCACGCGTaGAACACCTCGGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: CPFFPCPLELITELQEPKQSMHA*NTSDSQ
Trigger: CTGCGAGTCCGAGGTGTTCCACGCGTGCATCGACTG...CTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp GTCTTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGACCACTGGTTGGTCATaGGGTTGTAGCAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VFHKVLYKASQSPFLEEGTTGWS*GCSSPG
Trigger: CCCTGGACTGCTACAACCCCATGACCAACCAGTGGT...CCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GTCTTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGGGATGTCCTCATATTTaGCCTGCAGGGTCACGTCAC +
Preference number: 4 (lower is better)
Translates to: VFHKVLYKASQSPFLEEGGCPHI*PAGSRH
Trigger: GTGACGTGACCCTGCAGGTCAAATATGAGGACATCC...CCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGTAGATGTGGCCATCTATaGCCCCCACCCCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: GMTSSAASSALCFLFMLCRCGHL*PPPRCG
Trigger: ACCGCATCGGGGTGGGGGTCATAGATGGCCACATCT...ACAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp CAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGACAGGTACAGTTTTGTTaGTCAATTTGCTTCCGACAG +
Preference number: 4 (lower is better)
Translates to: QGLLTCEGAPPIPHPRLGQVQFC*SICFRQ
Trigger: CTGTCGGAAGCAAATTGATCAACAAAACTGTACCTG...TCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGTTTGCTGGGGTCCAGCTaGTGCACGAGGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: GMTSSAASSALCFLFMLCLLGSS*CTRKSL
Trigger: CAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAA...ACAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGAACGATGCCAATGGCGTTaGTGGGGTCCAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLLPLSTGIDHRVAGTKERCQWR*WGPAAA
Trigger: TGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCG...TTCTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp AGAAGGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTCGATGCCAATGGCGTTaGTGGGGTCCAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RRDDFFCRLFGPVFSVYARCQWR*WGPAAA
Trigger: TGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCG...AGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCTCACGGCCCGCAGCAGTaGCTGCACGTAGAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: DTQTVFLSCCQCSGIPSAHGPQQ*LHVEAP
Trigger: CGGCGCTTCTACGTGCAGGCACTGCTGCGGGCCGTG...AGCACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCACACGGCCCGCAGCAGTaGCTGCACGTAGAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPHGPQQ*LHVEAP
Trigger: CGGCGCTTCTACGTGCAGGCACTGCTGCGGGCCGTG...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGAAGCCTGCGTGGGCTTGTaGAGCGTGAGCTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SLLPLSTGIDHRVAGTKEACVGL*SVSSWN
Trigger: ATTCCAGGAGCTCACGCTGCACAAGCCCACGCAGGC...TTCTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp GTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCGGCAGGGCACTGCCTaGGTGGGCTTGTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: VIHRLFFCPVVSAQVFQVRQGTA*VGLCSV
Trigger: CACGCTGCACAAGCCCACGCAGGCAGTGCCCTGCCG...CACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCGGCAGGGCACTGCCTaGGTGGGCTTGTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: EAVIHRLFFCPVVSAQVFRQGTA*VGLCSV
Trigger: CACGCTGCACAAGCCCACGCAGGCAGTGCCCTGCCG...GAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp ACAGGGTTATTTAACAAAATAACTGTTCAGGGCTCAGAGCCCAGAGGCTTCTCTCCACACCCACCCCGCTaGGGCCAGATGTCATGCGGG +
Preference number: 4 (lower is better)
Translates to: TGLFNKITVQGSEPRGFSPHPPR*GQMSCG
Trigger: CCCGCATGACATCTGGCCGCAGCGGGGTGGGTGTGG...AGAGAAGCCTCTGGGCTCTGAGCCCTGAACAGTTATTTTGTTAAATAACCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp AGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTACCACACCCACCCCGCTaGGGCCAGATGTCATGCGGG +
Preference number: 4 (lower is better)
Translates to: REAVIHRLFFCPVVSAQVPHPPR*GQMSCG
Trigger: CCCGCATGACATCTGGCCGCAGCGGGGTGGGTGTGG...TACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCACCACACCCACCCCGCTaGGGCCAGATGTCATGCGGG +
Preference number: 4 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPPHPPR*GQMSCG
Trigger: CCCGCATGACATCTGGCCGCAGCGGGGTGGGTGTGG...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp TTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGATGAGCGTGGCCAGCTaGCAGTGTGACAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: FHKVLYKASQSPFLEEGMMSVAS*QCDRLK
Trigger: CTTCAACCTGTCACACTGCCAGCTGGCCACGCTCAT...CATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp GTACAATGGCAAGCAGAGACAATAGACGGGTTTCAGATACCAGCCCCATCAGGAAGCAGTCCAGGGCGCTaGAGTCAGTGTTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: VQWQAETIDGFQIPAPSGSSPGR*SQCCHP
Trigger: CGGATGGCAACACTGACTCCAGCGCCCTGGACTGCT...TCCTGATGGGGCTGGTATCTGAAACCCGTCTATTGTCTCTGCTTGCCATTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049567.10
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp TTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGTACGGTGATGCCTCATaGGGGCTACGAAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: FHKVLYKASQSPFLEEGMYGDAS*GLRKSR
Trigger: CCTGGACTTTCGTAGCCCCCATGAGGCATCACCGTA...CATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
3UTR CAA 72 bp GGACGCTCCAGGGCTATGACAGATGGGCCCATGGATTaGAGTTCTGGTCTTCCACAAGGTCCTTTACAAGGC +
Preference number: 4 (lower is better)
Translates to: GRSRAMTDGPMD*SSGLPQGPLQG
Trigger: GCCTTGTAAAGGACCTTGTGGAAGACCAGAACTCAAATCCATGGGCCCATCTGTCATAGCCCTGGAGCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp TCTGCGTGTATTTCAATAGAAGAGCTGTCTCTCCCTGAGGGATTCCGACCGCCCGGATGTCCTCATATTTaGCCTGCAGGGTCACGTCAC +
Preference number: 4 (lower is better)
Translates to: SACISIEELSLPEGFRPPGCPHI*PAGSRH
Trigger: GTGACGTGACCCTGCAGGTCAAATATGAGGACATCC...GGGCGGTCGGAATCCCTCAGGGAGAGACAGCTCTTCTATTGAAATACACGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp TCTGCGTGTATTTCAATAGAAGAGCTGTCTCTCCCTGAGGGATTCCGACCGCCCTGTCAATCTGGTACATaGCCGCCCCGTTCATCACGT +
Preference number: 4 (lower is better)
Translates to: SACISIEELSLPEGFRPPCQSGT*PPRSSR
Trigger: ACGTGATGAACGGGGCGGTCATGTACCAGATTGACA...GGGCGGTCGGAATCCCTCAGGGAGAGACAGCTCTTCTATTGAAATACACGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp TCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGAAGGCCAGCTGGCAGTGTaGCAGGTTGAAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: SLLPLSTGIDHRVAGTKEGQLAV*QVEELL
Trigger: GAGGAGTTCTTCAACCTGTCACACTGCCAGCTGGCC...TTCTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp GGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGTGGCCAGCTGGCAGTGTaGCAGGTTGAAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: GMTSSAASSALCFLFMLCGQLAV*QVEELL
Trigger: GAGGAGTTCTTCAACCTGTCACACTGCCAGCTGGCC...ACAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp AGAGACAATAGACGGGTTTCAGATACCAGCCCCATCAGGATCTGCGTGTATTTCAGATGTGGCCATCTATaGCCCCCACCCCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: RDNRRVSDTSPIRICVYFRCGHL*PPPRCG
Trigger: ACCGCATCGGGGTGGGGGTCATAGATGGCCACATCT...GAAATACACGCAGATCCTGATGGGGCTGGTATCTGAAACCCGTCTATTGTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000049567.10
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp GTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCACCCAGCGCACTACGGTaGTGCCTCATGGGGGCTACG +
Preference number: 4 (lower is better)
Translates to: VQRSSDTQTVFLSCCQCSPSALR*CLMGAT
Trigger: CGTAGCCCCCATGAGGCATCACCGTAGTGCGCTGGG...TGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCCCAGCGCACTACGGTaGTGCCTCATGGGGGCTACG +
Preference number: 4 (lower is better)
Translates to: VIHRLFFCPVVSAQVFQVPSALR*CLMGAT
Trigger: CGTAGCCCCCATGAGGCATCACCGTAGTGCGCTGGG...CACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGCCCAGCGCACTACGGTaGTGCCTCATGGGGGCTACG +
Preference number: 4 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQPSALR*CLMGAT
Trigger: CGTAGCCCCCATGAGGCATCACCGTAGTGCGCTGGG...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCGAGGGCGTCACCTCTaGCTTGCACTCCGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: VIHRLFFCPVVSAQVFQVRGRHL*LALRGG
Trigger: GCCTCCACGGAGTGCAAGGCAGAGGTGACGCCCTCG...CACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTACGAGGGCGTCACCTCTaGCTTGCACTCCGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: REAVIHRLFFCPVVSAQVRGRHL*LALRGG
Trigger: GCCTCCACGGAGTGCAAGGCAGAGGTGACGCCCTCG...TACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp CCTCTGAAGACCTGTGTGCCTACTCCATTCTTTATTCCCATGGGAAACTTACAGTGGACACCACCTCCATaGCCTGCTCCCGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: PLKTCVPTPFFIPMGNLQWTPPP*PAPEAR
Trigger: ACGGGCTTCGGGAGCAGGGCATGGAGGTGGTGTCCA...CTGTAAGTTTCCCATGGGAATAAAGAATGGAGTAGGCACACAGGTCTTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp AGAAGGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTCAGTGCAGCCGATCTaGTCCGCGAAGTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: RRDDFFCRLFGPVFSVYASVQPI*SAKLAM
Trigger: CATCGCCAACTTCGCGGAGCAGATCGGCTGCACTGA...AGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp CCTCTGAAGACCTGTGTGCCTACTCCATTCTTTATTCCCATGGGAAACTTACAGTTCTGCAGCTGCGTCTaGAGGAAGCGCGGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: PLKTCVPTPFFIPMGNLQFCSCV*RKRGVS
Trigger: GCTCACGCCGCGCTTCCTGCAGACGCAGCTGCAGAA...CTGTAAGTTTCCCATGGGAATAAAGAATGGAGTAGGCACACAGGTCTTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp CAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTCAGCGCGCGTCGGCCTaGAGGATCTCACACTTCTGC +
Preference number: 4 (lower is better)
Translates to: QRSSDTQTVFLSCCQCSGQRASA*RISHFC
Trigger: GCAGAAGTGTGAGATCCTGCAGGCCGACGCGCGCTG...ACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGCACCAGGTAGTCCTTaGAGCGCGCGTCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: VQRSSDTQTVFLSCCQCSAPGSP*SARRPA
Trigger: TGCAGGCCGACGCGCGCTGCAAGGACTACCTGGTGC...TGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TTCTGGTGGTGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACTGGATAGTAACATTCTaGGGAGTTAAGCCGGTTAGT +
Preference number: 4 (lower is better)
Translates to: FWWWEFKGFSPVRVPRPYWIVTF*GVKPVS
Trigger: ACTAACCGGCTTAACTCCGCAGAATGTTACTATCCA...GTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCACCACCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp AGGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGGGTGGATGCCTTCGATaGACACCACCTCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: RDDFFCRLFGPVFSVYALGGCLR*TPPPCP
Trigger: AGGGCATGGAGGTGGTGTCCATCGAAGGCATCCACC...CAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp CAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTTACTCCCGGGCACGCTaGTGCAGTTCAGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QRSSDTQTVFLSCCQCSGYSRAR*CSSVQP
Trigger: CGGCTGCACTGAACTGCACCAGCGTGCCCGGGAGTA...ACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp GGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGTAGAACTCCTCCTGCTTaGCCACCTCCCCGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: GMTSSAASSALCFLFMLCRTPPA*PPPRSA
Trigger: TGCACTTCGGGGAGGTGGCCAAGCAGGAGGAGTTCT...ACAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp AGGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGAGAACTCCTCCTGCTTaGCCACCTCCCCGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: RDDFFCRLFGPVFSVYALRTPPA*PPPRSA
Trigger: TGCACTTCGGGGAGGTGGCCAAGCAGGAGGAGTTCT...CAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp TCAGGATCTGCGTGTATTTCAATAGAAGAGCTGTCTCTCCCTGAGGGATTCCGACAGTCGATGCACGCGTaGAACACCTCGGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: SGSACISIEELSLPEGFRQSMHA*NTSDSQ
Trigger: CTGCGAGTCCGAGGTGTTCCACGCGTGCATCGACTG...TCGGAATCCCTCAGGGAGAGACAGCTCTTCTATTGAAATACACGCAGATCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp GCTTCTAATGCCCTGAAACTGACAGACAACTGTGTGTCCCACAAGAAGCAAGATTCCACGCTGCTGTGGTaGATGCAGCCGTGGGAACCC +
Preference number: 4 (lower is better)
Translates to: ASNALKLTDNCVSHKKQDSTLLW*MQPWEP
Trigger: GGGTTCCCACGGCTGCATCCACCACAGCAGCGTGGA...ATCTTGCTTCTTGTGGGACACACAGTTGTCTGTCAGTTTCAGGGCATTAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049567.10
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp GTACAATGGCAAGCAGAGACAATAGACGGGTTTCAGATACCAGCCCCATCAGGATGGGCTTGTGCAGCGTaGGCTCCTGGAATATCTGCA +
Preference number: 4 (lower is better)
Translates to: VQWQAETIDGFQIPAPSGWACAA*APGISA
Trigger: TGCAGATATTCCAGGAGCTCACGCTGCACAAGCCCA...TCCTGATGGGGCTGGTATCTGAAACCCGTCTATTGTCTCTGCTTGCCATTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049567.10
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp CAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTAGATGTGGCCATCTATaGCCCCCACCCCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: QRSSDTQTVFLSCCQCSGRCGHL*PPPRCG
Trigger: ACCGCATCGGGGTGGGGGTCATAGATGGCCACATCT...ACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGCATACAGCAAGCGGTTaGGCACTGCCACGCCCACGC +
Preference number: 4 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQHTASG*ALPRPR
Trigger: GCGTGGGCGTGGCAGTGCTCAACCGCTTGCTGTATG...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAACATACAGCAAGCGGTTaGGCACTGCCACGCCCACGC +
Preference number: 4 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQHTASG*ALPRPR
Trigger: GCGTGGGCGTGGCAGTGCTCAACCGCTTGCTGTATG...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTAGTTCGGTTACCGTCCTaGGAGGGCGTCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: REAVIHRLFFCPVVSAQVVRLPS*EGVTSA
Trigger: GGCAGAGGTGACGCCCTCGCAGGACGGTAACCGAAC...TACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GTCTTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGTCCTCATATTTGACCTaGAGGGTCACGTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: VFHKVLYKASQSPFLEEGSSYLT*RVTSQS
Trigger: ACTCTGTGACGTGACCCTGCAGGTCAAATATGAGGA...CCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp CTTACAGGGTTATTTAACAAAATAACTGTTCAGGGCTCAGAGCCCAGAGGCTTCACCACCTCCATGCCCTaGTCCCGAAGCCCGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LTGLFNKITVQGSEPRGFTTSMP*SRSPLV
Trigger: CACCAACGGGCTTCGGGAGCAGGGCATGGAGGTGGT...GAAGCCTCTGGGCTCTGAGCCCTGAACAGTTATTTTGTTAAATAACCCTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAACCACCTCCATGCCCTaGTCCCGAAGCCCGTTGGTG +
Preference number: 4 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQTTSMP*SRSPLV
Trigger: CACCAACGGGCTTCGGGAGCAGGGCATGGAGGTGGT...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGACCACCTCCATGCCCTaGTCCCGAAGCCCGTTGGTG +
Preference number: 4 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQTTSMP*SRSPLV
Trigger: CACCAACGGGCTTCGGGAGCAGGGCATGGAGGTGGT...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCTGGACACCACCTCCATaGCCTGCTCCCGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: EAVIHRLFFCPVVSAQVFWTPPP*PAPEAR
Trigger: ACGGGCTTCGGGAGCAGGGCATGGAGGTGGTGTCCA...GAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCATGGACACCACCTCCATaGCCTGCTCCCGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPWTPPP*PAPEAR
Trigger: ACGGGCTTCGGGAGCAGGGCATGGAGGTGGTGTCCA...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGCTGGGGTCCAGCTGCTaGACGAGGAAGTCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQLGSSC*TRKSLQ
Trigger: CTGCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAG...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GCTTCTAATGCCCTGAAACTGACAGACAACTGTGTGTCCCACAAGAAGCAAGATCCGCGAAGTTGGCGATaGCAATGGCGTTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ASNALKLTDNCVSHKKQDPRSWR*QWRCWG
Trigger: ACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGG...ATCTTGCTTCTTGTGGGACACACAGTTGTCTGTCAGTTTCAGGGCATTAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049567.10
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp TCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGAATTGAAGAACTCCTCCTaGTTGGCCACCTCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SLLPLSTGIDHRVAGTKELKNSS*LATSPK
Trigger: CTTCGGGGAGGTGGCCAAGCAGGAGGAGTTCTTCAA...TTCTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGTTCTGCAGCTGCGTCTaGAGGAAGCGCGGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQFCSCV*RKRGVS
Trigger: GCTCACGCCGCGCTTCCTGCAGACGCAGCTGCAGAA...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp CAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTTCACACTTCTGCAGCTaGGTCTGCAGGAAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: QRSSDTQTVFLSCCQCSGSHFCS*VCRKRG
Trigger: GCCGCGCTTCCTGCAGACGCAGCTGCAGAAGTGTGA...ACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCAGCGCGCGTCGGCCTaGAGGATCTCACACTTCTGC +
Preference number: 4 (lower is better)
Translates to: VIHRLFFCPVVSAQVFQVQRASA*RISHFC
Trigger: GCAGAAGTGTGAGATCCTGCAGGCCGACGCGCGCTG...CACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCTCAGCGCGCGTCGGCCTaGAGGATCTCACACTTCTGC +
Preference number: 4 (lower is better)
Translates to: DTQTVFLSCCQCSGIPSAQRASA*RISHFC
Trigger: GCAGAAGTGTGAGATCCTGCAGGCCGACGCGCGCTG...AGCACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCACAGCGCGCGTCGGCCTaGAGGATCTCACACTTCTGC +
Preference number: 4 (lower is better)
Translates to: VQRSSDTQTVFLSCCQCSQRASA*RISHFC
Trigger: GCAGAAGTGTGAGATCCTGCAGGCCGACGCGCGCTG...TGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp TCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGAACTGCCTTGCACTCCGTaGAGGCATACATCACTGCGT +
Preference number: 4 (lower is better)
Translates to: SLLPLSTGIDHRVAGTKELPCTP*RHTSLR
Trigger: ACGCAGTGATGTATGCCTCCACGGAGTGCAAGGCAG...TTCTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp GTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGTCCACGCTGCTGTGGTaGATGCAGCCGTGGGAACCC +
Preference number: 4 (lower is better)
Translates to: VIHRLFFCPVVSAQVFQVSTLLW*MQPWEP
Trigger: GGGTTCCCACGGCTGCATCCACCACAGCAGCGTGGA...CACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp TCAGGATCTGCGTGTATTTCAATAGAAGAGCTGTCTCTCCCTGAGGGATTCCGAGCCAGCACCACTTTGTaGGCCATGAATTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGSACISIEELSLPEGFRASTTL*AMNWAA
Trigger: AGCTGCCCAATTCATGGCTCACAAAGTGGTGCTGGC...TCGGAATCCCTCAGGGAGAGACAGCTCTTCTATTGAAATACACGCAGATCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp GCTTCTAATGCCCTGAAACTGACAGACAACTGTGTGTCCCACAAGAAGCAAGATGGCCAGCTGGCAGTGTaGCAGGTTGAAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: ASNALKLTDNCVSHKKQDGQLAV*QVEELL
Trigger: GAGGAGTTCTTCAACCTGTCACACTGCCAGCTGGCC...ATCTTGCTTCTTGTGGGACACACAGTTGTCTGTCAGTTTCAGGGCATTAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049567.10
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp TCTTTAGTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGCGAGGGCGTCACCTCTaGCTTGCACTCCGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLVQRSSDTQTVFLSCCQRGRHL*LALRGG
Trigger: GCCTCCACGGAGTGCAAGGCAGAGGTGACGCCCTCG...CTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTACTAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTTGGACACCACCTCCATaGCCTGCTCCCGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: RSSDTQTVFLSCCQCSGIWTPPP*PAPEAR
Trigger: ACGGGCTTCGGGAGCAGGGCATGGAGGTGGTGTCCA...AATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCTGCCCCGTTCATCACGTaGAGGACACACTTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: DTQTVFLSCCQCSGIPSAAPFIT*RTHFSP
Trigger: GGGCGAGAAGTGTGTCCTGCACGTGATGAACGGGGC...AGCACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGCCCCGTTCATCACGTaGAGGACACACTTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQAPFIT*RTHFSP
Trigger: GGGCGAGAAGTGTGTCCTGCACGTGATGAACGGGGC...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTCTGGGGTCCAGCTGCTaGACGAGGAAGTCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSLGSSC*TRKSLQ
Trigger: CTGCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAG...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGTTGCTGGGGTCCAGCTaGTGCACGAGGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: VIHRLFFCPVVSAQVFQVLLGSS*CTRKSL
Trigger: CAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAA...CACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCACGATGCCAATGGCGTTaGTGGGGTCCAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VQRSSDTQTVFLSCCQCSRCQWR*WGPAAA
Trigger: TGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCG...TGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCGATGCCAATGGCGTTaGTGGGGTCCAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VIHRLFFCPVVSAQVFQVRCQWR*WGPAAA
Trigger: TGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCG...CACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAACCGCGAAGTTGGCGATaGCAATGGCGTTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQPRSWR*QWRCWG
Trigger: ACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGG...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGCCGCGAAGTTGGCGATaGCAATGGCGTTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQPRSWR*QWRCWG
Trigger: ACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGG...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTTTCTGCAGCTGCGTCTaGAGGAAGCGCGGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSFCSCV*RKRGVS
Trigger: GCTCACGCCGCGCTTCCTGCAGACGCAGCTGCAGAA...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCATCACACTTCTGCAGCTaGGTCTGCAGGAAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPSHFCS*VCRKRG
Trigger: GCCGCGCTTCCTGCAGACGCAGCTGCAGAAGTGTGA...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGCCTGCGTGGGCTTGTaGAGCGTGAGCTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: VQRSSDTQTVFLSCCQCSACVGL*SVSSWN
Trigger: ATTCCAGGAGCTCACGCTGCACAAGCCCACGCAGGC...TGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGCCTGCGTGGGCTTGTaGAGCGTGAGCTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQACVGL*SVSSWN
Trigger: ATTCCAGGAGCTCACGCTGCACAAGCCCACGCAGGC...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp CCTCTGAAGACCTGTGTGCCTACTCCATTCTTTATTCCCATGGGAAACTTACAGGGTGGATGCCTTCGATaGACACCACCTCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: PLKTCVPTPFFIPMGNLQGGCLR*TPPPCP
Trigger: AGGGCATGGAGGTGGTGTCCATCGAAGGCATCCACC...CTGTAAGTTTCCCATGGGAATAAAGAATGGAGTAGGCACACAGGTCTTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp TCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGAATCCATGACCTTAGGGTaGATGCCTTCGATGGACACC +
Preference number: 4 (lower is better)
Translates to: SLLPLSTGIDHRVAGTKESMTLG*MPSMDT
Trigger: GGTGTCCATCGAAGGCATCCACCCTAAGGTCATGGA...TTCTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAATCTCGCCCACGGAGATaGAGGCCGTGTAGGCGAACT +
Preference number: 4 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQSRPRR*RPCRRT
Trigger: AGTTCGCCTACACGGCCTCCATCTCCGTGGGCGAGA...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp GTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGTCTCGCCCACGGAGATaGAGGCCGTGTAGGCGAACT +
Preference number: 4 (lower is better)
Translates to: VIHRLFFCPVVSAQVFQVSRPRR*RPCRRT
Trigger: AGTTCGCCTACACGGCCTCCATCTCCGTGGGCGAGA...CACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCATCTCGCCCACGGAGATaGAGGCCGTGTAGGCGAACT +
Preference number: 4 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPSRPRR*RPCRRT
Trigger: AGTTCGCCTACACGGCCTCCATCTCCGTGGGCGAGA...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp AGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATGCCAATGGCGTTGCTaGGGTCCAGCTGCTGCACGA +
Preference number: 4 (lower is better)
Translates to: REAVIHRLFFCPVVSAQVCQWRC*GPAAAR
Trigger: TCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCA...TACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp AGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTTACTCCCGGGCACGCTaGTGCAGTTCAGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RSSDTQTVFLSCCQCSGIYSRAR*CSSVQP
Trigger: CGGCTGCACTGAACTGCACCAGCGTGCCCGGGAGTA...AATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp GTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCAGTCGATGCACGCGTaGAACACCTCGGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: VIHRLFFCPVVSAQVFQVQSMHA*NTSDSQ
Trigger: CTGCGAGTCCGAGGTGTTCCACGCGTGCATCGACTG...CACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp AGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTACAGTCGATGCACGCGTaGAACACCTCGGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: REAVIHRLFFCPVVSAQVQSMHA*NTSDSQ
Trigger: CTGCGAGTCCGAGGTGTTCCACGCGTGCATCGACTG...TACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp GTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAAGCAGTCCAGGGCGCTaGAGTCAGTGTTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: VQRSSDTQTVFLSCCQCSSSPGR*SQCCHP
Trigger: CGGATGGCAACACTGACTCCAGCGCCCTGGACTGCT...TGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp GATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCTCCCGATGCGGTTGCGTaGCACGCTCATAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: DTQTVFLSCCQCSGIPSAPDAVA*HAHRGT
Trigger: TGTGCCTCTATGAGCGTGCCACGCAACCGCATCGGG...AGCACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp GAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCTCTCCACGCTGCTGTaGTGGATGCAGCCGTGGGAA +
Preference number: 4 (lower is better)
Translates to: EAVIHRLFFCPVVSAQVFLSTLL*WMQPWE
Trigger: TTCCCACGGCTGCATCCACCACAGCAGCGTGGAGAG...GAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGGCGAAGCTCGTTCATaGCGCCAAAAGCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQGEARS*RQKPAW
Trigger: CCAAGCAGGCTTTTGGCGTCATGAACGAGCTTCGCC...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGGGCGAAGCTCGTTCATaGCGCCAAAAGCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: VIHRLFFCPVVSAQVFQVGEARS*RQKPAW
Trigger: CCAAGCAGGCTTTTGGCGTCATGAACGAGCTTCGCC...CACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp CAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTGCCAGCACCACTTTGTaGGCCATGAATTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QRSSDTQTVFLSCCQCSGASTTL*AMNWAA
Trigger: AGCTGCCCAATTCATGGCTCACAAAGTGGTGCTGGC...ACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAGGCCAGCTGGCAGTGTaGCAGGTTGAAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPGQLAV*QVEELL
Trigger: GAGGAGTTCTTCAACCTGTCACACTGCCAGCTGGCC...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAAGGCCTCCAGGTAGCTaGGCGACTGTCGGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQRPPGS*ATVGSN
Trigger: GTTACTTCCGACAGTCGCTCAGCTACCTGGAGGCCT...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGAGGCCTCCAGGTAGCTaGGCGACTGTCGGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: VIHRLFFCPVVSAQVFQVRPPGS*ATVGSN
Trigger: GTTACTTCCGACAGTCGCTCAGCTACCTGGAGGCCT...CACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TCTTTAGTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGACCACCTCCATGCCCTaGTCCCGAAGCCCGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SLVQRSSDTQTVFLSCCQTTSMP*SRSPLV
Trigger: CACCAACGGGCTTCGGGAGCAGGGCATGGAGGTGGT...CTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTACTAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTTTGCTGGGGTCCAGCTaGTGCACGAGGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSLLGSS*CTRKSL
Trigger: CAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAA...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTCGATGCCAATGGCGTTaGTGGGGTCCAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSRCQWR*WGPAAA
Trigger: TGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCG...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCATCAGTGCAGCCGATCTaGTCCGCGAAGTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPSVQPI*SAKLAM
Trigger: CATCGCCAACTTCGCGGAGCAGATCGGCTGCACTGA...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTTCACACTTCTGCAGCTaGGTCTGCAGGAAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSSHFCS*VCRKRG
Trigger: GCCGCGCTTCCTGCAGACGCAGCTGCAGAAGTGTGA...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCCTGCGTGGGCTTGTaGAGCGTGAGCTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSACVGL*SVSSWN
Trigger: ATTCCAGGAGCTCACGCTGCACAAGCCCACGCAGGC...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp CCTCTGAAGACCTGTGTGCCTACTCCATTCTTTATTCCCATGGGAAACTTACAGCGCTGGAGTCAGTGTTaGCATCCGGAGAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: PLKTCVPTPFFIPMGNLQRWSQC*HPESCC
Trigger: GCAACAACTCTCCGGATGGCAACACTGACTCCAGCG...CTGTAAGTTTCCCATGGGAATAAAGAATGGAGTAGGCACACAGGTCTTCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp GTACAATGGCAAGCAGAGACAATAGACGGGTTTCAGATACCAGCCCCATCAGGAATCGTAGCCCCCTGCTaGATAGATACAGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: VQWQAETIDGFQIPAPSGIVAPC*IDTVVQ
Trigger: CTGCACAACTGTATCTATGCAGCAGGGGGCTACGAT...TCCTGATGGGGCTGGTATCTGAAACCCGTCTATTGTCTCTGCTTGCCATTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000049567.10
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGGTGGATGCCTTCGATaGACACCACCTCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQGGCLR*TPPPCP
Trigger: AGGGCATGGAGGTGGTGTCCATCGAAGGCATCCACC...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGGTGGATGCCTTCGATaGACACCACCTCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQGGCLR*TPPPCP
Trigger: AGGGCATGGAGGTGGTGTCCATCGAAGGCATCCACC...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAAGTTGGCGATGCCAATaGCGTTGCTGGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQSWRCQ*RCWGPA
Trigger: AGCTGGACCCCAGCAACGCCATTGGCATCGCCAACT...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGAGAACTCCTCCTGCTTaGCCACCTCCCCGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQRTPPA*PPPRSA
Trigger: TGCACTTCGGGGAGGTGGCCAAGCAGGAGGAGTTCT...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp CAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATGAGCGTGGCCAGCTaGCAGTGTGACAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: QRSSDTQTVFLSCCQCSGMSVAS*QCDRLK
Trigger: CTTCAACCTGTCACACTGCCAGCTGGCCACGCTCAT...ACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp AGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCCGATGCGGTTGCGTaGCACGCTCATAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: RSSDTQTVFLSCCQCSGIPDAVA*HAHRGT
Trigger: TGTGCCTCTATGAGCGTGCCACGCAACCGCATCGGG...AATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp AGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCTCTCCACGCTGCTGTaGTGGATGCAGCCGTGGGAA +
Preference number: 4 (lower is better)
Translates to: RSSDTQTVFLSCCQCSGILSTLL*WMQPWE
Trigger: TTCCCACGGCTGCATCCACCACAGCAGCGTGGAGAG...AATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp CAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTTACGGTGATGCCTCATaGGGGCTACGAAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QRSSDTQTVFLSCCQCSGYGDAS*GLRKSR
Trigger: CCTGGACTTTCGTAGCCCCCATGAGGCATCACCGTA...ACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGGCGAAGCTCGTTCATaGCGCCAAAAGCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSGEARS*RQKPAW
Trigger: CCAAGCAGGCTTTTGGCGTCATGAACGAGCTTCGCC...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp CAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTGGATGTCCTCATATTTaGCCTGCAGGGTCACGTCAC +
Preference number: 4 (lower is better)
Translates to: QRSSDTQTVFLSCCQCSGGCPHI*PAGSRH
Trigger: GTGACGTGACCCTGCAGGTCAAATATGAGGACATCC...ACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGCCAGCACCACTTTGTaGGCCATGAATTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQASTTL*AMNWAA
Trigger: AGCTGCCCAATTCATGGCTCACAAAGTGGTGCTGGC...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp CCTCTGAAGACCTGTGTGCCTACTCCATTCTTTATTCCCATGGGAAACTTACAGTGTCAATCTGGTACATaGCCGCCCCGTTCATCACGT +
Preference number: 4 (lower is better)
Translates to: PLKTCVPTPFFIPMGNLQCQSGT*PPRSSR
Trigger: ACGTGATGAACGGGGCGGTCATGTACCAGATTGACA...CTGTAAGTTTCCCATGGGAATAAAGAATGGAGTAGGCACACAGGTCTTCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp AGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTAGGCAGTGTGACAGGTTaGAGAACTCCTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: REAVIHRLFFCPVVSAQVGSVTG*RTPPAW
Trigger: CCAAGCAGGAGGAGTTCTTCAACCTGTCACACTGCC...TACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp GATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCTGGCAGTGTGACAGGTTaGAGAACTCCTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: DTQTVFLSCCQCSGIPSAGSVTG*RTPPAW
Trigger: CCAAGCAGGAGGAGTTCTTCAACCTGTCACACTGCC...AGCACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp AGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATGGGCTTGTGCAGCGTaGGCTCCTGGAATATCTGCA +
Preference number: 4 (lower is better)
Translates to: REAVIHRLFFCPVVSAQVWACAA*APGISA
Trigger: TGCAGATATTCCAGGAGCTCACGCTGCACAAGCCCA...TACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAATGGGCTTGTGCAGCGTaGGCTCCTGGAATATCTGCA +
Preference number: 4 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQWACAA*APGISA
Trigger: TGCAGATATTCCAGGAGCTCACGCTGCACAAGCCCA...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp TCTTTAGTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGAGATGTGGCCATCTATaGCCCCCACCCCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: SLVQRSSDTQTVFLSCCQRCGHL*PPPRCG
Trigger: ACCGCATCGGGGTGGGGGTCATAGATGGCCACATCT...CTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTACTAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCTTTGAAGAACTCCTCCTaGTTGGCCACCTCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: DTQTVFLSCCQCSGIPSALKNSS*LATSPK
Trigger: CTTCGGGGAGGTGGCCAAGCAGGAGGAGTTCTTCAA...AGCACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp GAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCTTGAAGAACTCCTCCTaGTTGGCCACCTCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: EAVIHRLFFCPVVSAQVFLKNSS*LATSPK
Trigger: CTTCGGGGAGGTGGCCAAGCAGGAGGAGTTCTTCAA...GAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp CAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTAGGATCTCACACTTCTaGAGCTGCGTCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QRSSDTQTVFLSCCQCSGRISHF*SCVCRK
Trigger: CTTCCTGCAGACGCAGCTGCAGAAGTGTGAGATCCT...ACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp CTTACAGGGTTATTTAACAAAATAACTGTTCAGGGCTCAGAGCCCAGAGGCTTCCGCTGGAGTCAGTGTTaGCATCCGGAGAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LTGLFNKITVQGSEPRGFRWSQC*HPESCC
Trigger: GCAACAACTCTCCGGATGGCAACACTGACTCCAGCG...GAAGCCTCTGGGCTCTGAGCCCTGAACAGTTATTTTGTTAAATAACCCTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCACGCTGGAGTCAGTGTTaGCATCCGGAGAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPRWSQC*HPESCC
Trigger: GCAACAACTCTCCGGATGGCAACACTGACTCCAGCG...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCGCTGGAGTCAGTGTTaGCATCCGGAGAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: EAVIHRLFFCPVVSAQVFRWSQC*HPESCC
Trigger: GCAACAACTCTCCGGATGGCAACACTGACTCCAGCG...GAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTACATATCTCTCCACGCTaGTGTGGTGGATGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: REAVIHRLFFCPVVSAQVHISPR*CGGCSR
Trigger: ACGGCTGCATCCACCACAGCAGCGTGGAGAGATATG...TACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp ACAGGGTTATTTAACAAAATAACTGTTCAGGGCTCAGAGCCCAGAGGCTTCTCTCATATCTCTCCACGCTaGTGTGGTGGATGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: TGLFNKITVQGSEPRGFSHISPR*CGGCSR
Trigger: ACGGCTGCATCCACCACAGCAGCGTGGAGAGATATG...AGAGAAGCCTCTGGGCTCTGAGCCCTGAACAGTTATTTTGTTAAATAACCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAACTGCCTTGCACTCCGTaGAGGCATACATCACTGCGT +
Preference number: 4 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQLPCTP*RHTSLR
Trigger: ACGCAGTGATGTATGCCTCCACGGAGTGCAAGGCAG...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp AGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTACTGCCTTGCACTCCGTaGAGGCATACATCACTGCGT +
Preference number: 4 (lower is better)
Translates to: REAVIHRLFFCPVVSAQVLPCTP*RHTSLR
Trigger: ACGCAGTGATGTATGCCTCCACGGAGTGCAAGGCAG...TACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp GATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCTCTGCCTTGCACTCCGTaGAGGCATACATCACTGCGT +
Preference number: 4 (lower is better)
Translates to: DTQTVFLSCCQCSGIPSALPCTP*RHTSLR
Trigger: ACGCAGTGATGTATGCCTCCACGGAGTGCAAGGCAG...AGCACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTAGTTGGCGATGCCAATaGCGTTGCTGGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSSWRCQ*RCWGPA
Trigger: AGCTGGACCCCAGCAACGCCATTGGCATCGCCAACT...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp AGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTAGAACTCCTCCTGCTTaGCCACCTCCCCGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: RSSDTQTVFLSCCQCSGIRTPPA*PPPRSA
Trigger: TGCACTTCGGGGAGGTGGCCAAGCAGGAGGAGTTCT...AATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGATGAGCGTGGCCAGCTaGCAGTGTGACAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQMSVAS*QCDRLK
Trigger: CTTCAACCTGTCACACTGCCAGCTGGCCACGCTCAT...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp GTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGACCACTGGTTGGTCATaGGGTTGTAGCAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VIHRLFFCPVVSAQVFQVTTGWS*GCSSPG
Trigger: CCCTGGACTGCTACAACCCCATGACCAACCAGTGGT...CACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp CTTACAGGGTTATTTAACAAAATAACTGTTCAGGGCTCAGAGCCCAGAGGCTTCTACGGTGATGCCTCATaGGGGCTACGAAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LTGLFNKITVQGSEPRGFYGDAS*GLRKSR
Trigger: CCTGGACTTTCGTAGCCCCCATGAGGCATCACCGTA...GAAGCCTCTGGGCTCTGAGCCCTGAACAGTTATTTTGTTAAATAACCCTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
3UTR CAA 72 bp TGCTTGGGTACAAAAATAATAAGCAGGAACCAGGCATaGCGCTATACAGATGTAGCCCCAGCACTCGGTAGG +
Preference number: 4 (lower is better)
Translates to: CLGTKIISRNQA*RYTDVAPALGR
Trigger: CCTACCGAGTGCTGGGGCTACATCTGTATAGCGCAATGCCTGGTTCCTGCTTATTATTTTTGTACCCAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000049567.10
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp GTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGATGTCCTCATATTTaGCCTGCAGGGTCACGTCAC +
Preference number: 4 (lower is better)
Translates to: VQRSSDTQTVFLSCCQCSGCPHI*PAGSRH
Trigger: GTGACGTGACCCTGCAGGTCAAATATGAGGACATCC...TGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGGATGTCCTCATATTTaGCCTGCAGGGTCACGTCAC +
Preference number: 4 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQGCPHI*PAGSRH
Trigger: GTGACGTGACCCTGCAGGTCAAATATGAGGACATCC...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCACCACTTTGTGAGCCATaGATTGGGCAGCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPPLCEP*IGQLGC
Trigger: ACATCCCAGCTGCCCAATTCATGGCTCACAAAGTGG...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCCAGCACCACTTTGTaGGCCATGAATTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSASTTL*AMNWAA
Trigger: AGCTGCCCAATTCATGGCTCACAAAGTGGTGCTGGC...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAATGTCAATCTGGTACATaGCCGCCCCGTTCATCACGT +
Preference number: 4 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQCQSGT*PPRSSR
Trigger: ACGTGATGAACGGGGCGGTCATGTACCAGATTGACA...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGTGTCAATCTGGTACATaGCCGCCCCGTTCATCACGT +
Preference number: 4 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQCQSGT*PPRSSR
Trigger: ACGTGATGAACGGGGCGGTCATGTACCAGATTGACA...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp AGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTGGCAGTGTGACAGGTTaGAGAACTCCTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RSSDTQTVFLSCCQCSGIGSVTG*RTPPAW
Trigger: CCAAGCAGGAGGAGTTCTTCAACCTGTCACACTGCC...AATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
CDS-3UTR TCA 90 bp TCTTTAGTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGGGCCAGCTGGCAGTGTaGCAGGTTGAAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: SLVQRSSDTQTVFLSCCQGQLAV*QVEELL
Trigger: GAGGAGTTCTTCAACCTGTCACACTGCCAGCTGGCC...CTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTACTAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp TGTCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGCAGGTACAGTTTTGTTaGTCAATTTGCTTCCGACAG +
Preference number: 4 (lower is better)
Translates to: CPFFPCPLELITELQEPKQVQFC*SICFRQ
Trigger: CTGTCGGAAGCAAATTGATCAACAAAACTGTACCTG...CTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGGATCTCACACTTCTaGAGCTGCGTCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPRISHF*SCVCRK
Trigger: CTTCCTGCAGACGCAGCTGCAGAAGTGTGAGATCCT...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTAAGGATCTCACACTTCTaGAGCTGCGTCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: REAVIHRLFFCPVVSAQVRISHF*SCVCRK
Trigger: CTTCCTGCAGACGCAGCTGCAGAAGTGTGAGATCCT...TACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp CAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATCGTAGCCCCCTGCTaGATAGATACAGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: QRSSDTQTVFLSCCQCSGIVAPC*IDTVVQ
Trigger: CTGCACAACTGTATCTATGCAGCAGGGGGCTACGAT...ACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCACCCATCGTAGCCCCCTaGTGCATAGATACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPPIVAP*CIDTVV
Trigger: CACAACTGTATCTATGCAGCAGGGGGCTACGATGGG...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCCCATCGTAGCCCCCTaGTGCATAGATACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: EAVIHRLFFCPVVSAQVFPIVAP*CIDTVV
Trigger: CACAACTGTATCTATGCAGCAGGGGGCTACGATGGG...GAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTCTGCCTTGCACTCCGTaGAGGCATACATCACTGCGT +
Preference number: 4 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSLPCTP*RHTSLR
Trigger: ACGCAGTGATGTATGCCTCCACGGAGTGCAAGGCAG...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCATCCATGACCTTAGGGTaGATGCCTTCGATGGACACC +
Preference number: 4 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPSMTLG*MPSMDT
Trigger: GGTGTCCATCGAAGGCATCCACCCTAAGGTCATGGA...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTACCACTGGTTGGTCATaGGGTTGTAGCAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSTTGWS*GCSSPG
Trigger: CCCTGGACTGCTACAACCCCATGACCAACCAGTGGT...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp TCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGAACCACTCATTCCTCTCTaGATAGTAACATTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: SLLPLSTGIDHRVAGTKEPLIPL*IVTFCG
Trigger: TCCGCAGAATGTTACTATCCAGAGAGGAATGAGTGG...TTCTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp AGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTTACGGTGATGCCTCATaGGGGCTACGAAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RSSDTQTVFLSCCQCSGIYGDAS*GLRKSR
Trigger: CCTGGACTTTCGTAGCCCCCATGAGGCATCACCGTA...AATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTCCACTTTGTGAGCCATaGATTGGGCAGCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSPLCEP*IGQLGC
Trigger: ACATCCCAGCTGCCCAATTCATGGCTCACAAAGTGG...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TCTTTAGTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGCATATCTCTCCACGCTaGTGTGGTGGATGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: SLVQRSSDTQTVFLSCCQHISPR*CGGCSR
Trigger: ACGGCTGCATCCACCACAGCAGCGTGGAGAGATATG...CTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTACTAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAATCGTAGCCCCCTGCTaGATAGATACAGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQIVAPC*IDTVVQ
Trigger: CTGCACAACTGTATCTATGCAGCAGGGGGCTACGAT...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp TCTTTAGTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGACCACTGGTTGGTCATaGGGTTGTAGCAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLVQRSSDTQTVFLSCCQTTGWS*GCSSPG
Trigger: CCCTGGACTGCTACAACCCCATGACCAACCAGTGGT...CTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTACTAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp TCTTTAGTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTACGGTGATGCCTCATaGGGGCTACGAAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLVQRSSDTQTVFLSCCQYGDAS*GLRKSR
Trigger: CCTGGACTTTCGTAGCCCCCATGAGGCATCACCGTA...CTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTACTAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp ACAGGGTTATTTAACAAAATAACTGTTCAGGGCTCAGAGCCCAGAGGCTTCTCTTCCTCATATTTGACCTaGAGGGTCACGTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: TGLFNKITVQGSEPRGFSSSYLT*RVTSQS
Trigger: ACTCTGTGACGTGACCCTGCAGGTCAAATATGAGGA...AGAGAAGCCTCTGGGCTCTGAGCCCTGAACAGTTATTTTGTTAAATAACCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp CTTACAGGGTTATTTAACAAAATAACTGTTCAGGGCTCAGAGCCCAGAGGCTTCTCCTCATATTTGACCTaGAGGGTCACGTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: LTGLFNKITVQGSEPRGFSSYLT*RVTSQS
Trigger: ACTCTGTGACGTGACCCTGCAGGTCAAATATGAGGA...GAAGCCTCTGGGCTCTGAGCCCTGAACAGTTATTTTGTTAAATAACCCTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp GATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCTTCCTCATATTTGACCTaGAGGGTCACGTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: DTQTVFLSCCQCSGIPSASSYLT*RVTSQS
Trigger: ACTCTGTGACGTGACCCTGCAGGTCAAATATGAGGA...AGCACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp TCTTTAGTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTCCATGACCTTAGGGTaGATGCCTTCGATGGACACC +
Preference number: 4 (lower is better)
Translates to: SLVQRSSDTQTVFLSCCQSMTLG*MPSMDT
Trigger: GGTGTCCATCGAAGGCATCCACCCTAAGGTCATGGA...CTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTACTAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTTCCTCATATTTGACCTaGAGGGTCACGTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSSSYLT*RVTSQS
Trigger: ACTCTGTGACGTGACCCTGCAGGTCAAATATGAGGA...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TCTTTAGTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGATCGTAGCCCCCTGCTaGATAGATACAGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SLVQRSSDTQTVFLSCCQIVAPC*IDTVVQ
Trigger: CTGCACAACTGTATCTATGCAGCAGGGGGCTACGAT...CTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTACTAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCACCACTCATTCCTCTCTaGATAGTAACATTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPPLIPL*IVTFCG
Trigger: TCCGCAGAATGTTACTATCCAGAGAGGAATGAGTGG...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CCA 90 bp ACAGGGTTATTTAACAAAATAACTGTTCAGGGCTCAGAGCCCAGAGGCTTCTCTCCACTCATTCCTCTCTaGATAGTAACATTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: TGLFNKITVQGSEPRGFSPLIPL*IVTFCG
Trigger: TCCGCAGAATGTTACTATCCAGAGAGGAATGAGTGG...AGAGAAGCCTCTGGGCTCTGAGCCCTGAACAGTTATTTTGTTAAATAACCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CCA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAACCACTCATTCCTCTCTaGATAGTAACATTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQPLIPL*IVTFCG
Trigger: TCCGCAGAATGTTACTATCCAGAGAGGAATGAGTGG...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCACAGGTACAGTTTTGTTaGTCAATTTGCTTCCGACAG +
Preference number: 4 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPQVQFC*SICFRQ
Trigger: CTGTCGGAAGCAAATTGATCAACAAAACTGTACCTG...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp GAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAGGTACAGTTTTGTTaGTCAATTTGCTTCCGACAG +
Preference number: 4 (lower is better)
Translates to: EAVIHRLFFCPVVSAQVFQVQFC*SICFRQ
Trigger: CTGTCGGAAGCAAATTGATCAACAAAACTGTACCTG...GAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp CTTACAGGGTTATTTAACAAAATAACTGTTCAGGGCTCAGAGCCCAGAGGCTTCTGGATAGTAACATTCTaGGGAGTTAAGCCGGTTAGT +
Preference number: 4 (lower is better)
Translates to: LTGLFNKITVQGSEPRGFWIVTF*GVKPVS
Trigger: ACTAACCGGCTTAACTCCGCAGAATGTTACTATCCA...GAAGCCTCTGGGCTCTGAGCCCTGAACAGTTATTTTGTTAAATAACCCTGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR GCA 90 bp GTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCATGGATAGTAACATTCTaGGGAGTTAAGCCGGTTAGT +
Preference number: 4 (lower is better)
Translates to: VQRSSDTQTVFLSCCQCSWIVTF*GVKPVS
Trigger: ACTAACCGGCTTAACTCCGCAGAATGTTACTATCCA...TGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR TCA 90 bp AGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCAGGTACAGTTTTGTTaGTCAATTTGCTTCCGACAG +
Preference number: 4 (lower is better)
Translates to: RSSDTQTVFLSCCQCSGIQVQFC*SICFRQ
Trigger: CTGTCGGAAGCAAATTGATCAACAAAACTGTACCTG...AATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR GCA 90 bp TCTTTAGTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGGATAGTAACATTCTaGGGAGTTAAGCCGGTTAGT +
Preference number: 4 (lower is better)
Translates to: SLVQRSSDTQTVFLSCCQWIVTF*GVKPVS
Trigger: ACTAACCGGCTTAACTCCGCAGAATGTTACTATCCA...CTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTACTAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 90 bp CAGGAAGCGCGGCGTGAGCGCATGGCAGCGCACGGCCCGCAGCAGTaGCTGCACGTAGAAGCGCCGCTGCGGGCAGTCGTATTTGACCCA +
Preference number: 5 (lower is better)
Translates to: QEARRERMAAHGPQQ*LHVEAPLRAVVFDP
Trigger: TGGGTCAAATACGACTGCCCGCAGCGGCGCTTCTACGTGCAGGCACTGCTGCGGGCCGTGCGCTGCCATGCGCTCACGCCGCGCTTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS TCA 90 bp GCAGGATCTCACACTTCTGCAGCTGCGTCTGCAGGAAGCGCGGCGTaGGCGCATGGCAGCGCACGGCCCGCAGCAGTGCCTGCACGTAGA +
Preference number: 5 (lower is better)
Translates to: AGSHTSAAASAGSAA*AHGSARPAAVPARR
Trigger: TCTACGTGCAGGCACTGCTGCGGGCCGTGCGCTGCCATGCGCTCACGCCGCGCTTCCTGCAGACGCAGCTGCAGAAGTGTGAGATCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp CCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTGGCCTCAGCTGTCCCTTCCCACCCCGATGCGGTaGCGTGGCACGCTCATAGAG +
Preference number: 5 (lower is better)
Translates to: PWAPVPEGASAPWPQLSLPTPMR*RGTLIE
Trigger: CTCTATGAGCGTGCCACGCAACCGCATCGGGGTGGG...AAGGGACAGCTGAGGCCAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS TCA 90 bp CTTTGGGCGCGCGGCAGGGCACTGCCTGCGTGGGCTTGTGCAGCGTaGGCTCCTGGAATATCTGCACCAGGTAGTCCTTGCAGCGCGCGT +
Preference number: 5 (lower is better)
Translates to: LWARGRALPAWACAA*APGISAPGSPCSAR
Trigger: ACGCGCGCTGCAAGGACTACCTGGTGCAGATATTCCAGGAGCTCACGCTGCACAAGCCCACGCAGGCAGTGCCCTGCCGCGCGCCCAAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 90 bp AGCAGTCCAGGGCGCTGGAGTCAGTGTTGCCATCCGGAGAGTTGTTaGGGCCGCCCACAGCGTATAGCAGCCCACCCACCACGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SSPGRWSQCCHPESC*GRPQRIAAHPPRSL
Trigger: CAGGCTGCGTGGTGGGTGGGCTGCTATACGCTGTGGGCGGCCGCAACAACTCTCCGGATGGCAACACTGACTCCAGCGCCCTGGACTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS TCA 90 bp GCAGCAGTGCCTGCACGTAGAAGCGCCGCTGCGGGCAGTCGTATTTaGCCCAGTCGATGCACGCGTGGAACACCTCGGACTCGCAGCGTA +
Preference number: 5 (lower is better)
Translates to: AAVPARRSAAAGSRI*PSRCTRGTPRTRSV
Trigger: TACGCTGCGAGTCCGAGGTGTTCCACGCGTGCATCGACTGGGTCAAATACGACTGCCCGCAGCGGCGCTTCTACGTGCAGGCACTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 90 bp TGTGTAGCTGAAGGTTCGGTTACCGTCCTGCGAGGGCGTCACCTCTaGCTTGCACTCCGTGGAGGCATACATCACTGCGTCCCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: CVAEGSVTVLRGRHL*LALRGGIHHCVPGP
Trigger: GGGGCCGGGGACGCAGTGATGTATGCCTCCACGGAGTGCAAGGCAGAGGTGACGCCCTCGCAGGACGGTAACCGAACCTTCAGCTACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 90 bp CAGTGCAGCCGATCTGCTCCGCGAAGTTGGCGATGCCAATGGCGTTaGTGGGGTCCAGCTGCTGCACGAGGAAGTCGCTGCAGGCTCGAA +
Preference number: 5 (lower is better)
Translates to: QCSRSAPRSWRCQWR*WGPAAARGSRCRLE
Trigger: TTCGAGCCTGCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGGAGCAGATCGGCTGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 90 bp GCTGGTGCAGTTCAGTGCAGCCGATCTGCTCCGCGAAGTTGGCGATaGCAATGGCGTTGCTGGGGTCCAGCTGCTGCACGAGGAAGTCGC +
Preference number: 5 (lower is better)
Translates to: AGAVQCSRSAPRSWR*QWRCWGPAAARGSR
Trigger: GCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGGAGCAGATCGGCTGCACTGAACTGCACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 90 bp TGCAGCCGATCTGCTCCGCGAAGTTGGCGATGCCAATGGCGTTGCTaGGGTCCAGCTGCTGCACGAGGAAGTCGCTGCAGGCTCGAACCA +
Preference number: 5 (lower is better)
Translates to: CSRSAPRSWRCQWRC*GPAAARGSRCRLEP
Trigger: TGGTTCGAGCCTGCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGGAGCAGATCGGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 90 bp GCAGTTCAGTGCAGCCGATCTGCTCCGCGAAGTTGGCGATGCCAATaGCGTTGCTGGGGTCCAGCTGCTGCACGAGGAAGTCGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AVQCSRSAPRSWRCQ*RCWGPAAARGSRCR
Trigger: CCTGCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGGAGCAGATCGGCTGCACTGAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp CAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGAGGCGTCACCTCTGCCTaGCACTCCGTGGAGGCATAC +
Preference number: 5 (lower is better)
Translates to: QGLLTCEGAPPIPHPRLGGVTSA*HSVEAY
Trigger: GTATGCCTCCACGGAGTGCAAGGCAGAGGTGACGCC...TCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp GAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACATGCGGGCAGTCGTATTaGACCCAGTCGATGCACGCG +
Preference number: 5 (lower is better)
Translates to: EGAPPIPHPRLGRSRAMTCGQSY*TQSMHA
Trigger: CGCGTGCATCGACTGGGTCAAATACGACTGCCCGCA...TGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 90 bp TCCGCGAAGTTGGCGATGCCAATGGCGTTGCTGGGGTCCAGCTGCTaGACGAGGAAGTCGCTGCAGGCTCGAACCACGCTGTCAATCTGG +
Preference number: 5 (lower is better)
Translates to: SAKLAMPMALLGSSC*TRKSLQARTTLSIW
Trigger: CCAGATTGACAGCGTGGTTCGAGCCTGCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 90 bp TGCTCCGCGAAGTTGGCGATGCCAATGGCGTTGCTGGGGTCCAGCTaGTGCACGAGGAAGTCGCTGCAGGCTCGAACCACGCTGTCAATC +
Preference number: 5 (lower is better)
Translates to: CSAKLAMPMALLGSS*CTRKSLQARTTLSI
Trigger: GATTGACAGCGTGGTTCGAGCCTGCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 90 bp GGTTGGTCATGGGGTTGTAGCAGTCCAGGGCGCTGGAGTCAGTGTTaGCATCCGGAGAGTTGTTGCGGCCGCCCACAGCGTATAGCAGCC +
Preference number: 5 (lower is better)
Translates to: GWSWGCSSPGRWSQC*HPESCCGRPQRIAA
Trigger: GGCTGCTATACGCTGTGGGCGGCCGCAACAACTCTCCGGATGGCAACACTGACTCCAGCGCCCTGGACTGCTACAACCCCATGACCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 90 bp GCCACGCCCACGCCAATCCTCCGTGTCAACATTGGCGCGACTAGATaGCACTCGTCCCGCTCTGGCTCATATCTCTCCACGCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: ATPTPILRVNIGATR*HSSRSGSYLSTLLW
Trigger: CCACAGCAGCGTGGAGAGATATGAGCCAGAGCGGGACGAGTGGCATCTAGTCGCGCCAATGTTGACACGGAGGATTGGCGTGGGCGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 90 bp AAGCGCCGCTGCGGGCAGTCGTATTTGACCCAGTCGATGCACGCGTaGAACACCTCGGACTCGCAGCGTACGTTCAGATCATCCCGGCTG +
Preference number: 5 (lower is better)
Translates to: KRRCGQSYLTQSMHA*NTSDSQRTFRSSRL
Trigger: CAGCCGGGATGATCTGAACGTACGCTGCGAGTCCGAGGTGTTCCACGCGTGCATCGACTGGGTCAAATACGACTGCCCGCAGCGGCGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 90 bp TGCGTAGATGTGGCCATCTATGACCCCCACCCCGATGCGGTTGCGTaGCACGCTCATAGAGGCACAGGGCGACCACTGGTTGGTCATGGG +
Preference number: 5 (lower is better)
Translates to: CVDVAIYDPHPDAVA*HAHRGTGRPLVGHG
Trigger: CCCATGACCAACCAGTGGTCGCCCTGTGCCTCTATGAGCGTGCCACGCAACCGCATCGGGGTGGGGGTCATAGATGGCCACATCTACGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp CCGGCTTGTCCCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTGGCCTCATGGCAGTGTGACAGGTaGAAGAACTCCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: PACPLGPSSRGSLSPLASWQCDR*KNSSCL
Trigger: CAAGCAGGAGGAGTTCTTCAACCTGTCACACTGCCA...TGAGGCCAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGGGACAAGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CAA 90 bp GGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACAGATTGCGGGCAGTCGTATTaGACCCAGTCGATGCACGCG +
Preference number: 5 (lower is better)
Translates to: GAPPIPHPRLGRSRAMTDCGQSY*TQSMHA
Trigger: CGCGTGCATCGACTGGGTCAAATACGACTGCCCGCA...ATCTGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS TCA 90 bp CGAGGAAGTCGCTGCAGGCTCGAACCACGCTGTCAATCTGGTACATaGCCGCCCCGTTCATCACGTGCAGGACACACTTCTCGCCCACGG +
Preference number: 5 (lower is better)
Translates to: RGSRCRLEPRCQSGT*PPRSSRAGHTSRPR
Trigger: CCGTGGGCGAGAAGTGTGTCCTGCACGTGATGAACGGGGCGGTCATGTACCAGATTGACAGCGTGGTTCGAGCCTGCAGCGACTTCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp TTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGATGAGGCGGCCCACTTaGGGCGCGCGGCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: FHKVLYKASQSPFLEEGMMRRPT*GARQGT
Trigger: AGTGCCCTGCCGCGCGCCCAAAGTGGGCCGCCTCAT...CATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp CAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGACTTCATGAGGCGGCCCACTTaGGGCGCGCGGCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: QGPLQGIPVALPGRRDDFMRRPT*GARQGT
Trigger: AGTGCCCTGCCGCGCGCCCAAAGTGGGCCGCCTCAT...GAAGTCATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp GGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGAGCGCTGGAGTCAGTGTaGCCATCCGGAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: GVQGLLTCEGAPPIPHPRALESV*PSGELL
Trigger: CAACAACTCTCCGGATGGCAACACTGACTCCAGCGC...TCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp GGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACAGATTGGCAGTGTGACAGGTaGAAGAACTCCTCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: GAPPIPHPRLGRSRAMTDWQCDR*KNSSSP
Trigger: CGGGGAGGAGGAGTTCTTCAACCTGTCACACTGCCA...ATCTGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000216436.2
CDS CCA 90 bp TCGCAGCGTACGTTCAGATCATCCCGGCTGATGAGCGTGGCCAGCTaGCAGTGTGACAGGTTGAAGAACTCCTCCTGCTTGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: SQRTFRSSRLMSVAS*QCDRLKNSSCLATS
Trigger: GGAGGTGGCCAAGCAGGAGGAGTTCTTCAACCTGTCACACTGCCAGCTGGCCACGCTCATCAGCCGGGATGATCTGAACGTACGCTGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
CDS TCA 90 bp GCAGCACGCAGACCCCGGCCCCGCTCCGGATGGTATTCATCGGTGTaGTCATCCGCCACTCATTCCTCTCTGGATAGTAACATTCTGCGG +
Preference number: 5 (lower is better)
Translates to: AARRPRPRSGWYSSV*SSATHSSLDSNILR
Trigger: CCGCAGAATGTTACTATCCAGAGAGGAATGAGTGGCGGATGATCACACCGATGAATACCATCCGGAGCGGGGCCGGGGTCTGCGTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 90 bp CGAAGTGCATGTAGATATACTCCCGGGCACGCTGGTGCAGTTCAGTaGAGCCGATCTGCTCCGCGAAGTTGGCGATGCCAATGGCGTTGC +
Preference number: 5 (lower is better)
Translates to: RSACRYTPGHAGAVQ*SRSAPRSWRCQWRC
Trigger: GCAACGCCATTGGCATCGCCAACTTCGCGGAGCAGATCGGCTGCACTGAACTGCACCAGCGTGCCCGGGAGTATATCTACATGCACTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 90 bp TGCTGCACGAGGAAGTCGCTGCAGGCTCGAACCACGCTGTCAATCTaGTACATGACCGCCCCGTTCATCACGTGCAGGACACACTTCTCG +
Preference number: 5 (lower is better)
Translates to: CCTRKSLQARTTLSI*YMTAPFITCRTHFS
Trigger: CGAGAAGTGTGTCCTGCACGTGATGAACGGGGCGGTCATGTACCAGATTGACAGCGTGGTTCGAGCCTGCAGCGACTTCCTCGTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 90 bp TCGCAGCGTACGTTCAGATCATCCCGGCTGATGAGCGTGGCCAGCTaGCAGTGTGACAGGTTGAAGAACTCCTCCTCCCCGAAGTGCATG +
Preference number: 5 (lower is better)
Translates to: SQRTFRSSRLMSVAS*QCDRLKNSSSPKCM
Trigger: CATGCACTTCGGGGAGGAGGAGTTCTTCAACCTGTCACACTGCCAGCTGGCCACGCTCATCAGCCGGGATGATCTGAACGTACGCTGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp GGTGCCCCGCCCATACCCCATCCCAGACTTGGACGCTCCAGGGCTATGACAGATTGCTCCCGAAGCCCGTaGGTGAACATGGCTTTAAAG +
Preference number: 5 (lower is better)
Translates to: GAPPIPHPRLGRSRAMTDCSRSP*VNMALK
Trigger: CTTTAAAGCCATGTTCACCAACGGGCTTCGGGAGCA...ATCTGTCATAGCCCTGGAGCGTCCAAGTCTGGGATGGGGTATGGGCGGGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp CAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGACTTCGCGATGCCAATGGCGTaGCTGGGGTCCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QGPLQGIPVALPGRRDDFAMPMA*LGSSCC
Trigger: GCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGC...GAAGTCATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp TTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGGCGATGCCAATGGCGTaGCTGGGGTCCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FHKVLYKASQSPFLEEGMAMPMA*LGSSCC
Trigger: GCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGC...CATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp CAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGATGGCAGTGTGACAGGTaGAAGAACTCCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: QGLLTCEGAPPIPHPRLGWQCDR*KNSSCL
Trigger: CAAGCAGGAGGAGTTCTTCAACCTGTCACACTGCCA...TCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CAA 90 bp CAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGACTTCGGCGTCACCTCTGCCTaGCACTCCGTGGAGGCATAC +
Preference number: 5 (lower is better)
Translates to: QGPLQGIPVALPGRRDDFGVTSA*HSVEAY
Trigger: GTATGCCTCCACGGAGTGCAAGGCAGAGGTGACGCC...GAAGTCATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp TGTCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGGCGATGCCAATGGCGTaGCTGGGGTCCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CPFFPCPLELITELQEPKAMPMA*LGSSCC
Trigger: GCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGC...CTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS TCA 90 bp AGGTACAGTTTTGTTGATCAATTTGCTTCCGACAGGGTTCCATGGTaGCGGCCACACCCACCCCGCTGCGGCCAGATGTCATGCGGGTCA +
Preference number: 5 (lower is better)
Translates to: RYSFVDQFASDRVPW*RPHPPRCGQMSCGS
Trigger: TGACCCGCATGACATCTGGCCGCAGCGGGGTGGGTGTGGCCGTCACCATGGAACCCTGTCGGAAGCAAATTGATCAACAAAACTGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp TTCCACAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGTGCGGGCAGTCGTATTaGACCCAGTCGATGCACGCG +
Preference number: 5 (lower is better)
Translates to: FHKVLYKASQSPFLEEGMCGQSY*TQSMHA
Trigger: CGCGTGCATCGACTGGGTCAAATACGACTGCCCGCA...CATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp GGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGTCCCACCCCGATGCGGTaGCGTGGCACGCTCATAGAG +
Preference number: 5 (lower is better)
Translates to: GMTSSAASSALCFLFMLCPTPMR*RGTLIE
Trigger: CTCTATGAGCGTGCCACGCAACCGCATCGGGGTGGG...ACAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp CCTTGGGCCCCAGTTCCAGAGGGAGCCTCAGCCCCTTGGCCTCAGCTGTCCCTTTCAGCAGGTACAGTTTaGTTGATCAATTTGCTTCCG +
Preference number: 5 (lower is better)
Translates to: PWAPVPEGASAPWPQLSLSAGTV*LINLLP
Trigger: CGGAAGCAAATTGATCAACAAAACTGTACCTGCTGA...AAGGGACAGCTGAGGCCAAGGGGCTGAGGCTCCCTCTGGAACTGGGGCCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS GCA 90 bp GCTGGGATGTCCTCATATTTGACCTGCAGGGTCACGTCACAGAGTTaGTGGCTCAGGCGAAGCTCGTTCATGACGCCAAAAGCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: AGMSSYLTCRVTSQS*WLRRSSFMTPKACL
Trigger: CAAGCAGGCTTTTGGCGTCATGAACGAGCTTCGCCTGAGCCAGCAACTCTGTGACGTGACCCTGCAGGTCAAATATGAGGACATCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 90 bp GGGATGTCCTCATATTTGACCTGCAGGGTCACGTCACAGAGTTGCTaGCTCAGGCGAAGCTCGTTCATGACGCCAAAAGCCTGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: GMSSYLTCRVTSQSC*LRRSSFMTPKACLV
Trigger: CACCAAGCAGGCTTTTGGCGTCATGAACGAGCTTCGCCTGAGCCAGCAACTCTGTGACGTGACCCTGCAGGTCAAATATGAGGACATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp GAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCATGAGGCGGCCCACTTaGGGCGCGCGGCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: EAVIHRLFFCPVVSAQVFMRRPT*GARQGT
Trigger: AGTGCCCTGCCGCGCGCCCAAAGTGGGCCGCCTCAT...GAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGATGAGGCGGCCCACTTaGGGCGCGCGGCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQMRRPT*GARQGT
Trigger: AGTGCCCTGCCGCGCGCCCAAAGTGGGCCGCCTCAT...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAATGAGGCGGCCCACTTaGGGCGCGCGGCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPMRRPT*GARQGT
Trigger: AGTGCCCTGCCGCGCGCCCAAAGTGGGCCGCCTCAT...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp CAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGACTTCGCGCTGGAGTCAGTGTaGCCATCCGGAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: QGPLQGIPVALPGRRDDFALESV*PSGELL
Trigger: CAACAACTCTCCGGATGGCAACACTGACTCCAGCGC...GAAGTCATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp TCAGGATCTGCGTGTATTTCAATAGAAGAGCTGTCTCTCCCTGAGGGATTCCGAGGCGTCACCTCTGCCTaGCACTCCGTGGAGGCATAC +
Preference number: 5 (lower is better)
Translates to: SGSACISIEELSLPEGFRGVTSA*HSVEAY
Trigger: GTATGCCTCCACGGAGTGCAAGGCAGAGGTGACGCC...TCGGAATCCCTCAGGGAGAGACAGCTCTTCTATTGAAATACACGCAGATCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CAA 90 bp TCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGAATGCGGGCAGTCGTATTaGACCCAGTCGATGCACGCG +
Preference number: 5 (lower is better)
Translates to: SLLPLSTGIDHRVAGTKECGQSY*TQSMHA
Trigger: CGCGTGCATCGACTGGGTCAAATACGACTGCCCGCA...TTCTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CAA 90 bp TGTCCCTTCTTCCCCTGTCCACTGGAATTGATCACCGAGTTGCAGGAACCAAAGGCGCTGGAGTCAGTGTaGCCATCCGGAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: CPFFPCPLELITELQEPKALESV*PSGELL
Trigger: CAACAACTCTCCGGATGGCAACACTGACTCCAGCGC...CTTTGGTTCCTGCAACTCGGTGATCAATTCCAGTGGACAGGGGAAGAAGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CAA 90 bp CAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGAGCAGGTACAGTTTTGTaGATCAATTTGCTTCCGACA +
Preference number: 5 (lower is better)
Translates to: QGLLTCEGAPPIPHPRLGAGTVL*INLLPT
Trigger: TGTCGGAAGCAAATTGATCAACAAAACTGTACCTGC...TCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp CAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACCCCATCCCAGACTTGGATCAGCAGGTACAGTTTaGTTGATCAATTTGCTTCCG +
Preference number: 5 (lower is better)
Translates to: QGLLTCEGAPPIPHPRLGSAGTV*LINLLP
Trigger: CGGAAGCAAATTGATCAACAAAACTGTACCTGCTGA...TCCAAGTCTGGGATGGGGTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS TCA 90 bp TACGTTCAGATCATCCCGGCTGATGAGCGTGGCCAGCTGGCAGTGTaGCAGGTTGAAGAACTCCTCCTCCCCGAAGTGCATGTAGATATA +
Preference number: 5 (lower is better)
Translates to: YVQIIPADERGQLAV*QVEELLLPEVHVDI
Trigger: TATATCTACATGCACTTCGGGGAGGAGGAGTTCTTCAACCTGTCACACTGCCAGCTGGCCACGCTCATCAGCCGGGATGATCTGAACGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp CAAGGTCCTTTACAAGGCATCCCAGTCGCCCTTCCTGGAAGAAGGGATGACTTCTTTGTGAGCCATGAATaGGGCAGCTGGGATGTCCTC +
Preference number: 5 (lower is better)
Translates to: QGPLQGIPVALPGRRDDFFVSHE*GSWDVL
Trigger: GAGGACATCCCAGCTGCCCAATTCATGGCTCACAAA...GAAGTCATCCCTTCTTCCAGGAAGGGCGACTGGGATGCCTTGTAAAGGACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp AGAGACAATAGACGGGTTTCAGATACCAGCCCCATCAGGATCTGCGTGTATTTCAAGAACTCCTCCTGCTaGGCCACCTCCCCGAAGTGC +
Preference number: 5 (lower is better)
Translates to: RDNRRVSDTSPIRICVYFKNSSC*ATSPKC
Trigger: GCACTTCGGGGAGGTGGCCAAGCAGGAGGAGTTCTT...GAAATACACGCAGATCCTGATGGGGCTGGTATCTGAAACCCGTCTATTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049567.10
ENSMUST00000194542.6
CDS-3UTR CAA 90 bp ACAGGGTTATTTAACAAAATAACTGTTCAGGGCTCAGAGCCCAGAGGCTTCTCTCCCACCCCGATGCGGTaGCGTGGCACGCTCATAGAG +
Preference number: 5 (lower is better)
Translates to: TGLFNKITVQGSEPRGFSPTPMR*RGTLIE
Trigger: CTCTATGAGCGTGCCACGCAACCGCATCGGGGTGGG...AGAGAAGCCTCTGGGCTCTGAGCCCTGAACAGTTATTTTGTTAAATAACCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CAA 90 bp AGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTACCCACCCCGATGCGGTaGCGTGGCACGCTCATAGAG +
Preference number: 5 (lower is better)
Translates to: REAVIHRLFFCPVVSAQVPTPMR*RGTLIE
Trigger: CTCTATGAGCGTGCCACGCAACCGCATCGGGGTGGG...TACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp TTCTGGTGGTGGGAGTTCAAGGGCTTCTCACCTGTGAGGGTGCCCCGCCCATACTCAGCAGGTACAGTTTaGTTGATCAATTTGCTTCCG +
Preference number: 5 (lower is better)
Translates to: FWWWEFKGFSPVRVPRPYSAGTV*LINLLP
Trigger: CGGAAGCAAATTGATCAACAAAACTGTACCTGCTGA...GTATGGGCGGGGCACCCTCACAGGTGAGAAGCCCTTGAACTCCCACCACCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CAA 90 bp GATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCTGGCGTCACCTCTGCCTaGCACTCCGTGGAGGCATAC +
Preference number: 5 (lower is better)
Translates to: DTQTVFLSCCQCSGIPSAGVTSA*HSVEAY
Trigger: GTATGCCTCCACGGAGTGCAAGGCAGAGGTGACGCC...AGCACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp AGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAGGCGTCACCTCTGCCTaGCACTCCGTGGAGGCATAC +
Preference number: 5 (lower is better)
Translates to: SSDTQTVFLSCCQCSGIPGVTSA*HSVEAY
Trigger: GTATGCCTCCACGGAGTGCAAGGCAGAGGTGACGCC...TGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCGATGCCAATGGCGTaGCTGGGGTCCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSAMPMA*LGSSCC
Trigger: GCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGC...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp AGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTGCGATGCCAATGGCGTaGCTGGGGTCCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RSSDTQTVFLSCCQCSGIAMPMA*LGSSCC
Trigger: GCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGC...AATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp CCTCTGAAGACCTGTGTGCCTACTCCATTCTTTATTCCCATGGGAAACTTACAGAAGAACTCCTCCTGCTaGGCCACCTCCCCGAAGTGC +
Preference number: 5 (lower is better)
Translates to: PLKTCVPTPFFIPMGNLQKNSSC*ATSPKC
Trigger: GCACTTCGGGGAGGTGGCCAAGCAGGAGGAGTTCTT...CTGTAAGTTTCCCATGGGAATAAAGAATGGAGTAGGCACACAGGTCTTCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
CDS-3UTR CAA 90 bp AGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCCACCCCGATGCGGTaGCGTGGCACGCTCATAGAG +
Preference number: 5 (lower is better)
Translates to: RSSDTQTVFLSCCQCSGIPTPMR*RGTLIE
Trigger: CTCTATGAGCGTGCCACGCAACCGCATCGGGGTGGG...AATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp AGGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGTGCTCCCGAAGCCCGTaGGTGAACATGGCTTTAAAG +
Preference number: 5 (lower is better)
Translates to: RDDFFCRLFGPVFSVYALCSRSP*VNMALK
Trigger: CTTTAAAGCCATGTTCACCAACGGGCTTCGGGAGCA...CAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp TACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGAAGAACTCCTCCTGCTaGGCCACCTCCCCGAAGTGC +
Preference number: 5 (lower is better)
Translates to: YREAVIHRLFFCPVVSAQKNSSC*ATSPKC
Trigger: GCACTTCGGGGAGGTGGCCAAGCAGGAGGAGTTCTT...CTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
CDS-3UTR CAA 90 bp AGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATGCGGGCAGTCGTATTaGACCCAGTCGATGCACGCG +
Preference number: 5 (lower is better)
Translates to: REAVIHRLFFCPVVSAQVCGQSY*TQSMHA
Trigger: CGCGTGCATCGACTGGGTCAAATACGACTGCCCGCA...TACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 90 bp CCGGATGGTATTCATCGGTGTGATCATCCGCCACTCATTCCTCTCTaGATAGTAACATTCTGCGGAGTTAAGCCGGTTAGTCCCGTCAAA +
Preference number: 5 (lower is better)
Translates to: PDGIHRCDHPPLIPL*IVTFCGVKPVSPVK
Trigger: TTTGACGGGACTAACCGGCTTAACTCCGCAGAATGTTACTATCCAGAGAGGAATGAGTGGCGGATGATCACACCGATGAATACCATCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTAAGAACTCCTCCTGCTaGGCCACCTCCCCGAAGTGC +
Preference number: 5 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSKNSSC*ATSPKC
Trigger: GCACTTCGGGGAGGTGGCCAAGCAGGAGGAGTTCTT...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
CDS-3UTR CAA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGCGCTGGAGTCAGTGTaGCCATCCGGAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQALESV*PSGELL
Trigger: CAACAACTCTCCGGATGGCAACACTGACTCCAGCGC...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp GATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGCTGCGCTGGAGTCAGTGTaGCCATCCGGAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: DTQTVFLSCCQCSGIPSAALESV*PSGELL
Trigger: CAACAACTCTCCGGATGGCAACACTGACTCCAGCGC...AGCACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp CAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTTGCTCCCGAAGCCCGTaGGTGAACATGGCTTTAAAG +
Preference number: 5 (lower is better)
Translates to: QRSSDTQTVFLSCCQCSGCSRSP*VNMALK
Trigger: CTTTAAAGCCATGTTCACCAACGGGCTTCGGGAGCA...ACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAATTTGTGAGCCATGAATaGGGCAGCTGGGATGTCCTC +
Preference number: 5 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQFVSHE*GSWDVL
Trigger: GAGGACATCCCAGCTGCCCAATTCATGGCTCACAAA...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp GTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGTTTGTGAGCCATGAATaGGGCAGCTGGGATGTCCTC +
Preference number: 5 (lower is better)
Translates to: VIHRLFFCPVVSAQVFQVFVSHE*GSWDVL
Trigger: GAGGACATCCCAGCTGCCCAATTCATGGCTCACAAA...CACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp GAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCTTTGTGAGCCATGAATaGGGCAGCTGGGATGTCCTC +
Preference number: 5 (lower is better)
Translates to: EAVIHRLFFCPVVSAQVFFVSHE*GSWDVL
Trigger: GAGGACATCCCAGCTGCCCAATTCATGGCTCACAAA...GAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAATGGCAGTGTGACAGGTaGAAGAACTCCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQWQCDR*KNSSCL
Trigger: CAAGCAGGAGGAGTTCTTCAACCTGTCACACTGCCA...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
CDS-3UTR CAA 90 bp GTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGTGGCAGTGTGACAGGTaGAAGAACTCCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: VIHRLFFCPVVSAQVFQVWQCDR*KNSSCL
Trigger: CAAGCAGGAGGAGTTCTTCAACCTGTCACACTGCCA...CACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
CDS-3UTR CAA 90 bp AGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTTGCTCCCGAAGCCCGTaGGTGAACATGGCTTTAAAG +
Preference number: 5 (lower is better)
Translates to: SDTQTVFLSCCQCSGIPSCSRSP*VNMALK
Trigger: CTTTAAAGCCATGTTCACCAACGGGCTTCGGGAGCA...ACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp AGGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGGCAGGTACAGTTTTGTaGATCAATTTGCTTCCGACA +
Preference number: 5 (lower is better)
Translates to: RDDFFCRLFGPVFSVYALAGTVL*INLLPT
Trigger: TGTCGGAAGCAAATTGATCAACAAAACTGTACCTGC...CAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp GGGATGACTTCTTCTGCCGCCTCTTCGGCCCTGTGTTTTCTGTTTATGCTTTGTGCAGGTACAGTTTTGTaGATCAATTTGCTTCCGACA +
Preference number: 5 (lower is better)
Translates to: GMTSSAASSALCFLFMLCAGTVL*INLLPT
Trigger: TGTCGGAAGCAAATTGATCAACAAAACTGTACCTGC...ACAAAGCATAAACAGAAAACACAGGGCCGAAGAGGCGGCAGAAGAAGTCATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp TCTTTAGTACAGAGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTTTGTGAGCCATGAATaGGGCAGCTGGGATGTCCTC +
Preference number: 5 (lower is better)
Translates to: SLVQRSSDTQTVFLSCCQFVSHE*GSWDVL
Trigger: GAGGACATCCCAGCTGCCCAATTCATGGCTCACAAA...CTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCTCTGTACTAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp GTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAAGTGGCAGGTACAGTTTTGTaGATCAATTTGCTTCCGACA +
Preference number: 5 (lower is better)
Translates to: VIHRLFFCPVVSAQVFQVAGTVL*INLLPT
Trigger: TGTCGGAAGCAAATTGATCAACAAAACTGTACCTGC...CACTTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp GCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTCCAATCAGCAGGTACAGTTTaGTTGATCAATTTGCTTCCG +
Preference number: 5 (lower is better)
Translates to: AVIHRLFFCPVVSAQVFQSAGTV*LINLLP
Trigger: CGGAAGCAAATTGATCAACAAAACTGTACCTGCTGA...TTGGAATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp AGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTGCAGGTACAGTTTTGTaGATCAATTTGCTTCCGACA +
Preference number: 5 (lower is better)
Translates to: RSSDTQTVFLSCCQCSGIAGTVL*INLLPT
Trigger: TGTCGGAAGCAAATTGATCAACAAAACTGTACCTGC...AATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS-3UTR CAA 90 bp AGAAGCAGTGATACACAGACTGTTTTTCTGTCCTGTTGTCAGTGCTCAGGTATTTCAGCAGGTACAGTTTaGTTGATCAATTTGCTTCCG +
Preference number: 5 (lower is better)
Translates to: RSSDTQTVFLSCCQCSGISAGTV*LINLLP
Trigger: CGGAAGCAAATTGATCAACAAAACTGTACCTGCTGA...AATACCTGAGCACTGACAACAGGACAGAAAAACAGTCTGTGTATCACTGCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp CGGCGTGAGCGCATGGCAGCGCACGGCCCGCAGCAGTaGCTGCACGTAGAAGCGCCGCTGCGGGCAGTCGTA +
Preference number: 6 (lower is better)
Translates to: RRERMAAHGPQQ*LHVEAPLRAVV
Trigger: TACGACTGCCCGCAGCGGCGCTTCTACGTGCAGGCACTGCTGCGGGCCGTGCGCTGCCATGCGCTCACGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS TCA 72 bp CACACTTCTGCAGCTGCGTCTGCAGGAAGCGCGGCGTaGGCGCATGGCAGCGCACGGCCCGCAGCAGTGCCT +
Preference number: 6 (lower is better)
Translates to: HTSAAASAGSAA*AHGSARPAAVP
Trigger: AGGCACTGCTGCGGGCCGTGCGCTGCCATGCGCTCACGCCGCGCTTCCTGCAGACGCAGCTGCAGAAGTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 72 bp CGTCCTGCGAGGGCGTCACCTCTGCCTTGCACTCCGTaGAGGCATACATCACTGCGTCCCCGGCCCCCTCGG +
Preference number: 6 (lower is better)
Translates to: RPARASPLPCTP*RHTSLRPRPPR
Trigger: CCGAGGGGGCCGGGGACGCAGTGATGTATGCCTCCACGGAGTGCAAGGCAGAGGTGACGCCCTCGCAGGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp TTGCAGCGCGCGTCGGCCTGCAGGATCTCACACTTCTaGAGCTGCGTCTGCAGGAAGCGCGGCGTGAGCGCA +
Preference number: 6 (lower is better)
Translates to: LQRASACRISHF*SCVCRKRGVSA
Trigger: TGCGCTCACGCCGCGCTTCCTGCAGACGCAGCTGCAGAAGTGTGAGATCCTGCAGGCCGACGCGCGCTGCAA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CAA 90 bp CGGGCACGCTGGTGCAGTTCAGTGCAGCCGATCTGCTCCGCGAAGTaGGCGATGCCAATGGCGTTGCTGGGGTCCAGCTGCTGCACGAGG +
Preference number: 6 (lower is better)
Translates to: RARWCSSVQPICSAK*AMPMALLGSSCCTR
Trigger: CCTCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGGAGCAGATCGGCTGCACTGAACTGCACCAGCGTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp GGGCGCTGGAGTCAGTGTTGCCATCCGGAGAGTTGTTaGGGCCGCCCACAGCGTATAGCAGCCCACCCACCA +
Preference number: 6 (lower is better)
Translates to: GRWSQCCHPESC*GRPQRIAAHPP
Trigger: TGGTGGGTGGGCTGCTATACGCTGTGGGCGGCCGCAACAACTCTCCGGATGGCAACACTGACTCCAGCGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CAA 72 bp AGGGCGCTGGAGTCAGTGTTGCCATCCGGAGAGTTGTaGCGGCCGCCCACAGCGTATAGCAGCCCACCCACC +
Preference number: 6 (lower is better)
Translates to: RALESVLPSGEL*RPPTAYSSPPT
Trigger: GGTGGGTGGGCTGCTATACGCTGTGGGCGGCCGCAACAACTCTCCGGATGGCAACACTGACTCCAGCGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CAA 72 bp TCCAGGGCGCTGGAGTCAGTGTTGCCATCCGGAGAGTaGTTGCGGCCGCCCACAGCGTATAGCAGCCCACCC +
Preference number: 6 (lower is better)
Translates to: SRALESVLPSGE*LRPPTAYSSPP
Trigger: GGGTGGGCTGCTATACGCTGTGGGCGGCCGCAACAACTCTCCGGATGGCAACACTGACTCCAGCGCCCTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS TCA 72 bp CGCGGCAGGGCACTGCCTGCGTGGGCTTGTGCAGCGTaGGCTCCTGGAATATCTGCACCAGGTAGTCCTTGC +
Preference number: 6 (lower is better)
Translates to: RGRALPAWACAA*APGISAPGSPC
Trigger: GCAAGGACTACCTGGTGCAGATATTCCAGGAGCTCACGCTGCACAAGCCCACGCAGGCAGTGCCCTGCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp TTCGGTTACCGTCCTGCGAGGGCGTCACCTCTGCCTTaGACTCCGTGGAGGCATACATCACTGCGTCCCCGG +
Preference number: 6 (lower is better)
Translates to: FGYRPARASPLP*TPWRHTSLRPR
Trigger: CCGGGGACGCAGTGATGTATGCCTCCACGGAGTGCAAGGCAGAGGTGACGCCCTCGCAGGACGGTAACCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp TTGGCGATGCCAATGGCGTTGCTGGGGTCCAGCTGCTaGACGAGGAAGTCGCTGCAGGCTCGAACCACGCTG +
Preference number: 6 (lower is better)
Translates to: LAMPMALLGSSC*TRKSLQARTTL
Trigger: CAGCGTGGTTCGAGCCTGCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp CGATCTGCTCCGCGAAGTTGGCGATGCCAATGGCGTTaGTGGGGTCCAGCTGCTGCACGAGGAAGTCGCTGC +
Preference number: 6 (lower is better)
Translates to: RSAPRSWRCQWR*WGPAAARGSRC
Trigger: GCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGGAGCAGATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp TCCCGGGCACGCTGGTGCAGTTCAGTGCAGCCGATCTaGTCCGCGAAGTTGGCGATGCCAATGGCGTTGCTG +
Preference number: 6 (lower is better)
Translates to: SRARWCSSVQPI*SAKLAMPMALL
Trigger: CAGCAACGCCATTGGCATCGCCAACTTCGCGGAGCAGATCGGCTGCACTGAACTGCACCAGCGTGCCCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp TGGGGTTGTAGCAGTCCAGGGCGCTGGAGTCAGTGTTaGCATCCGGAGAGTTGTTGCGGCCGCCCACAGCGT +
Preference number: 6 (lower is better)
Translates to: WGCSSPGRWSQC*HPESCCGRPQR
Trigger: ACGCTGTGGGCGGCCGCAACAACTCTCCGGATGGCAACACTGACTCCAGCGCCCTGGACTGCTACAACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 72 bp TCTGCTCCGCGAAGTTGGCGATGCCAATGGCGTTGCTaGGGTCCAGCTGCTGCACGAGGAAGTCGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: SAPRSWRCQWRC*GPAAARGSRCR
Trigger: CCTGCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGGAGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 72 bp GTGGCCATCTATGACCCCCACCCCGATGCGGTTGCGTaGCACGCTCATAGAGGCACAGGGCGACCACTGGTT +
Preference number: 6 (lower is better)
Translates to: VAIYDPHPDAVA*HAHRGTGRPLV
Trigger: AACCAGTGGTCGCCCTGTGCCTCTATGAGCGTGCCACGCAACCGCATCGGGGTGGGGGTCATAGATGGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CAA 72 bp GTTCGGTTACCGTCCTGCGAGGGCGTCACCTCTGCCTaGCACTCCGTGGAGGCATACATCACTGCGTCCCCG +
Preference number: 6 (lower is better)
Translates to: VRLPSCEGVTSA*HSVEAYITASP
Trigger: CGGGGACGCAGTGATGTATGCCTCCACGGAGTGCAAGGCAGAGGTGACGCCCTCGCAGGACGGTAACCGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CAA 72 bp CCGATCTGCTCCGCGAAGTTGGCGATGCCAATGGCGTaGCTGGGGTCCAGCTGCTGCACGAGGAAGTCGCTG +
Preference number: 6 (lower is better)
Translates to: PICSAKLAMPMA*LGSSCCTRKSL
Trigger: CAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGGAGCAGATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CAA 72 bp GCACTGCCACGCCCACGCCAATCCTCCGTGTCAACATaGGCGCGACTAGATGCCACTCGTCCCGCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: ALPRPRQSSVST*ARLDATRPALA
Trigger: AGCCAGAGCGGGACGAGTGGCATCTAGTCGCGCCAATGTTGACACGGAGGATTGGCGTGGGCGTGGCAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CAA 90 bp TCAGTGCAGCCGATCTGCTCCGCGAAGTTGGCGATGCCAATGGCGTaGCTGGGGTCCAGCTGCTGCACGAGGAAGTCGCTGCAGGCTCGA +
Preference number: 6 (lower is better)
Translates to: SVQPICSAKLAMPMA*LGSSCCTRKSLQAR
Trigger: TCGAGCCTGCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGGAGCAGATCGGCTGCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS TCA 72 bp CCTGCACGTAGAAGCGCCGCTGCGGGCAGTCGTATTTaGCCCAGTCGATGCACGCGTGGAACACCTCGGACT +
Preference number: 6 (lower is better)
Translates to: PARRSAAAGSRI*PSRCTRGTPRT
Trigger: AGTCCGAGGTGTTCCACGCGTGCATCGACTGGGTCAAATACGACTGCCCGCAGCGGCGCTTCTACGTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp AAGTTGGCGATGCCAATGGCGTTGCTGGGGTCCAGCTaGTGCACGAGGAAGTCGCTGCAGGCTCGAACCACG +
Preference number: 6 (lower is better)
Translates to: KLAMPMALLGSS*CTRKSLQARTT
Trigger: CGTGGTTCGAGCCTGCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp GTTCAGTGCAGCCGATCTGCTCCGCGAAGTTGGCGATaGCAATGGCGTTGCTGGGGTCCAGCTGCTGCACGA +
Preference number: 6 (lower is better)
Translates to: VQCSRSAPRSWR*QWRCWGPAAAR
Trigger: TCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGGAGCAGATCGGCTGCACTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 72 bp TGCAGCCGATCTGCTCCGCGAAGTTGGCGATGCCAATaGCGTTGCTGGGGTCCAGCTGCTGCACGAGGAAGT +
Preference number: 6 (lower is better)
Translates to: CSRSAPRSWRCQ*RCWGPAAARGS
Trigger: ACTTCCTCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGGAGCAGATCGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CAA 72 bp TGGTGCAGTTCAGTGCAGCCGATCTGCTCCGCGAAGTaGGCGATGCCAATGGCGTTGCTGGGGTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: WCSSVQPICSAK*AMPMALLGSSC
Trigger: GCAGCTGGACCCCAGCAACGCCATTGGCATCGCCAACTTCGCGGAGCAGATCGGCTGCACTGAACTGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp GAAGGTTCGGTTACCGTCCTGCGAGGGCGTCACCTCTaGCTTGCACTCCGTGGAGGCATACATCACTGCGTC +
Preference number: 6 (lower is better)
Translates to: EGSVTVLRGRHL*LALRGGIHHCV
Trigger: GACGCAGTGATGTATGCCTCCACGGAGTGCAAGGCAGAGGTGACGCCCTCGCAGGACGGTAACCGAACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS TCA 72 bp ATCATCCCGGCTGATGAGCGTGGCCAGCTGGCAGTGTaGCAGGTTGAAGAACTCCTCCTGCTTGGCCACCTC +
Preference number: 6 (lower is better)
Translates to: IIPADERGQLAV*QVEELLLLGHL
Trigger: GAGGTGGCCAAGCAGGAGGAGTTCTTCAACCTGTCACACTGCCAGCTGGCCACGCTCATCAGCCGGGATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
CDS TCA 72 bp AGGAGCCATTGCTCGGGTTGTAGGCCTCCAGGTAGCTaGGCGACTGTCGGAAGTAACCGCCCGCTGTGTAGA +
Preference number: 6 (lower is better)
Translates to: RSHCSGCRPPGS*ATVGSNRPLCR
Trigger: TCTACACAGCGGGCGGTTACTTCCGACAGTCGCTCAGCTACCTGGAGGCCTACAACCCGAGCAATGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp CTGTCAATCTGGTACATGACCGCCCCGTTCATCACGTaGAGGACACACTTCTCGCCCACGGAGATGGAGGCC +
Preference number: 6 (lower is better)
Translates to: LSIWYMTAPFIT*RTHFSPTEMEA
Trigger: GGCCTCCATCTCCGTGGGCGAGAAGTGTGTCCTGCACGTGATGAACGGGGCGGTCATGTACCAGATTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp ACTGTTCAACTGGTCCTGCCCATCGTAGCCCCCTGCTaGATAGATACAGTTGTGCAGCACGCAGACCCCGGC +
Preference number: 6 (lower is better)
Translates to: TVQLVLPIVAPC*IDTVVQHADPG
Trigger: GCCGGGGTCTGCGTGCTGCACAACTGTATCTATGCAGCAGGGGGCTACGATGGGCAGGACCAGTTGAACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 72 bp ACTGGTTGGTCATGGGGTTGTAGCAGTCCAGGGCGCTaGAGTCAGTGTTGCCATCCGGAGAGTTGTTGCGGC +
Preference number: 6 (lower is better)
Translates to: TGWSWGCSSPGR*SQCCHPESCCG
Trigger: GCCGCAACAACTCTCCGGATGGCAACACTGACTCCAGCGCCCTGGACTGCTACAACCCCATGACCAACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 72 bp ACGTTCAGATCATCCCGGCTGATGAGCGTGGCCAGCTaGCAGTGTGACAGGTTGAAGAACTCCTCCTCCCCG +
Preference number: 6 (lower is better)
Translates to: TFRSSRLMSVAS*QCDRLKNSSSP
Trigger: CGGGGAGGAGGAGTTCTTCAACCTGTCACACTGCCAGCTGGCCACGCTCATCAGCCGGGATGATCTGAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216436.2
CDS TCA 72 bp CGCTGCAGGCTCGAACCACGCTGTCAATCTGGTACATaGCCGCCCCGTTCATCACGTGCAGGACACACTTCT +
Preference number: 6 (lower is better)
Translates to: RCRLEPRCQSGT*PPRSSRAGHTS
Trigger: AGAAGTGTGTCCTGCACGTGATGAACGGGGCGGTCATGTACCAGATTGACAGCGTGGTTCGAGCCTGCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS TCA 72 bp TTGCCCTGGTGCACAGTAATCCCCAGCGCACTACGGTaGTGCCTCATGGGGGCTACGAAAGTCCAGGTCTCT +
Preference number: 6 (lower is better)
Translates to: LPWCTVIPSALR*CLMGATKVQVS
Trigger: AGAGACCTGGACTTTCGTAGCCCCCATGAGGCATCACCGTAGTGCGCTGGGGATTACTGTGCACCAGGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp TGTAGATATACTCCCGGGCACGCTGGTGCAGTTCAGTaGAGCCGATCTGCTCCGCGAAGTTGGCGATGCCAA +
Preference number: 6 (lower is better)
Translates to: CRYTPGHAGAVQ*SRSAPRSWRCQ
Trigger: TTGGCATCGCCAACTTCGCGGAGCAGATCGGCTGCACTGAACTGCACCAGCGTGCCCGGGAGTATATCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp ACGCCAATCCTCCGTGTCAACATTGGCGCGACTAGATaGCACTCGTCCCGCTCTGGCTCATATCTCTCCACG +
Preference number: 6 (lower is better)
Translates to: TPILRVNIGATR*HSSRSGSYLST
Trigger: CGTGGAGAGATATGAGCCAGAGCGGGACGAGTGGCATCTAGTCGCGCCAATGTTGACACGGAGGATTGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp CACACTGTTCAACTGGTCCTGCCCATCGTAGCCCCCTaGTGCATAGATACAGTTGTGCAGCACGCAGACCCC +
Preference number: 6 (lower is better)
Translates to: HTVQLVLPIVAP*CIDTVVQHADP
Trigger: GGGGTCTGCGTGCTGCACAACTGTATCTATGCAGCAGGGGGCTACGATGGGCAGGACCAGTTGAACAGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 72 bp TGCGGGCAGTCGTATTTGACCCAGTCGATGCACGCGTaGAACACCTCGGACTCGCAGCGTACGTTCAGATCA +
Preference number: 6 (lower is better)
Translates to: CGQSYLTQSMHA*NTSDSQRTFRS
Trigger: TGATCTGAACGTACGCTGCGAGTCCGAGGTGTTCCACGCGTGCATCGACTGGGTCAAATACGACTGCCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CAA 72 bp ATGGACACCACCTCCATGCCCTGCTCCCGAAGCCCGTaGGTGAACATGGCTTTAAAGACTGGGCTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: MDTTSMPCSRSP*VNMALKTGLEE
Trigger: CTCCTCCAGCCCAGTCTTTAAAGCCATGTTCACCAACGGGCTTCGGGAGCAGGGCATGGAGGTGGTGTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS TCA 72 bp AGACCCCGGCCCCGCTCCGGATGGTATTCATCGGTGTaGTCATCCGCCACTCATTCCTCTCTGGATAGTAAC +
Preference number: 6 (lower is better)
Translates to: RPRPRSGWYSSV*SSATHSSLDSN
Trigger: GTTACTATCCAGAGAGGAATGAGTGGCGGATGATCACACCGATGAATACCATCCGGAGCGGGGCCGGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS TCA 72 bp TTTGTTGATCAATTTGCTTCCGACAGGGTTCCATGGTaGCGGCCACACCCACCCCGCTGCGGCCAGATGTCA +
Preference number: 6 (lower is better)
Translates to: FVDQFASDRVPW*RPHPPRCGQMS
Trigger: TGACATCTGGCCGCAGCGGGGTGGGTGTGGCCGTCACCATGGAACCCTGTCGGAAGCAAATTGATCAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 72 bp ACGTTCAGATCATCCCGGCTGATGAGCGTGGCCAGCTaGCAGTGTGACAGGTTGAAGAACTCCTCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: TFRSSRLMSVAS*QCDRLKNSSCL
Trigger: CAAGCAGGAGGAGTTCTTCAACCTGTCACACTGCCAGCTGGCCACGCTCATCAGCCGGGATGATCTGAACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
CDS TCA 72 bp CAAAAGCCTGCTTGGTGTGATCCTCTAGTGTGTAGCTaGAGGTTCGGTTACCGTCCTGCGAGGGCGTCACCT +
Preference number: 6 (lower is better)
Translates to: QKPAWCDPLVCS*RFGYRPARASP
Trigger: AGGTGACGCCCTCGCAGGACGGTAACCGAACCTTCAGCTACACACTAGAGGATCACACCAAGCAGGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS TCA 72 bp CGTCACAGAGTTGCTGGCTCAGGCGAAGCTCGTTCATaGCGCCAAAAGCCTGCTTGGTGTGATCCTCTAGTG +
Preference number: 6 (lower is better)
Translates to: RHRVAGSGEARS*RQKPAWCDPLV
Trigger: CACTAGAGGATCACACCAAGCAGGCTTTTGGCGTCATGAACGAGCTTCGCCTGAGCCAGCAACTCTGTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CAA 90 bp AGCTGGGATGTCCTCATATTTGACCTGCAGGGTCACGTCACAGAGTaGCTGGCTCAGGCGAAGCTCGTTCATGACGCCAAAAGCCTGCTT +
Preference number: 6 (lower is better)
Translates to: SWDVLIFDLQGHVTE*LAQAKLVHDAKSLL
Trigger: AAGCAGGCTTTTGGCGTCATGAACGAGCTTCGCCTGAGCCAGCAACTCTGTGACGTGACCCTGCAGGTCAAATATGAGGACATCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp CATCCGCCACTCATTCCTCTCTGGATAGTAACATTCTaGGGAGTTAAGCCGGTTAGTCCCGTCAAAGCCCCC +
Preference number: 6 (lower is better)
Translates to: HPPLIPLWIVTF*GVKPVSPVKAP
Trigger: GGGGGCTTTGACGGGACTAACCGGCTTAACTCCGCAGAATGTTACTATCCAGAGAGGAATGAGTGGCGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CCA 72 bp TCATATTTGACCTGCAGGGTCACGTCACAGAGTTGCTaGCTCAGGCGAAGCTCGTTCATGACGCCAAAAGCC +
Preference number: 6 (lower is better)
Translates to: SYLTCRVTSQSC*LRRSSFMTPKA
Trigger: GGCTTTTGGCGTCATGAACGAGCTTCGCCTGAGCCAGCAACTCTGTGACGTGACCCTGCAGGTCAAATATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS CAA 72 bp GTCCTCATATTTGACCTGCAGGGTCACGTCACAGAGTaGCTGGCTCAGGCGAAGCTCGTTCATGACGCCAAA +
Preference number: 6 (lower is better)
Translates to: VLIFDLQGHVTE*LAQAKLVHDAK
Trigger: TTTGGCGTCATGAACGAGCTTCGCCTGAGCCAGCAACTCTGTGACGTGACCCTGCAGGTCAAATATGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2
CDS GCA 72 bp TCCTCATATTTGACCTGCAGGGTCACGTCACAGAGTTaGTGGCTCAGGCGAAGCTCGTTCATGACGCCAAAA +
Preference number: 6 (lower is better)
Translates to: SSYLTCRVTSQS*WLRRSSFMTPK
Trigger: TTTTGGCGTCATGAACGAGCTTCGCCTGAGCCAGCAACTCTGTGACGTGACCCTGCAGGTCAAATATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049567.10
ENSMUST00000164812.8
ENSMUST00000193982.2
ENSMUST00000194542.6
ENSMUST00000216436.2