Pregenerated sensors for KDSR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009905Ensembl transcript IDs: ENSMUST00000010049.6
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR GCA 90 bp | CTCGCCCATGGAACCGCAGTCTTGCGCATGTGCACGCGCACAGGCTaGCATCAGAGGGCTCCTTACCATGCTGAAGATACTGCTGGGTGC | + |
Preference number: 1 (lower is better) Translates to: LAHGTAVLRMCTRTG*HQRAPYHAEDTAGC Trigger: GCACCCAGCAGTATCTTCAGCATGGTAAGGAGCCCTCTGATGGCAGCCTGTGCGCGTGCACATGCGCAAGACTGCGGTTCCATGGGCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR GCA 90 bp | GGCTGCCATCAGAGGGCTCCTTACCATGCTGAAGATACTGCTGGGTaGCAGTGCGCGAGACAGAGCCGCTCAACACCCAACCTCCAAACC | + |
Preference number: 1 (lower is better) Translates to: GCHQRAPYHAEDTAG*QCARQSRSTPNLQT Trigger: GGTTTGGAGGTTGGGTGTTGAGCGGCTCTGTCTCGCGCACTGGCACCCAGCAGTATCTTCAGCATGGTAAGGAGCCCTCTGATGGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR TCA 90 bp | TGGGGAACAATAAACAGGATGAGTGGGATACAGGCAGGACTCATCTaGGGCACTTGTTGCAGGCTCGCCCATGGAACCGCAGTCTTGCGC | + |
Preference number: 1 (lower is better) Translates to: WGTINRMSGIQAGLI*GTCCRLAHGTAVLR Trigger: GCGCAAGACTGCGGTTCCATGGGCGAGCCTGCAACAAGTGCCTCAGATGAGTCCTGCCTGTATCCCACTCATCCTGTTTATTGTTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR CCA 90 bp | TGTCCCACCTCAGCAGCTGTCCAATATGCCACAAGTCGTAGACTTTaGCTAGGCTGGACTGAAGGGGTGCTGGAACTGTTTTGGCCTTGT | + |
Preference number: 1 (lower is better) Translates to: CPTSAAVQYATSRRL*LGWTEGVLELFWPC Trigger: ACAAGGCCAAAACAGTTCCAGCACCCCTTCAGTCCAGCCTAGCCAAAGTCTACGACTTGTGGCATATTGGACAGCTGCTGAGGTGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR GCA 90 bp | ATCACCCCTACAGCCCAGAAAATCAAAGGTGTCCTGGCCCATATTTaGATAGTGTTTAACAGTTGTAGAGATGGCCTCATGTCCCTCTGC | + |
Preference number: 1 (lower is better) Translates to: ITPTAQKIKGVLAHI*IVFNSCRDGLMSLC Trigger: GCAGAGGGACATGAGGCCATCTCTACAACTGTTAAACACTATGCAAATATGGGCCAGGACACCTTTGATTTTCTGGGCTGTAGGGGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR CCA 90 bp | GAGAACAGGGTAAAATATCAGGACATAGAACACTGTCCTAGAGCCTaGGGAACAATAAACAGGATGAGTGGGATACAGGCAGGACTCATC | + |
Preference number: 1 (lower is better) Translates to: ENRVKYQDIEHCPRA*GTINRMSGIQAGLI Trigger: GATGAGTCCTGCCTGTATCCCACTCATCCTGTTTATTGTTCCCCAGGCTCTAGGACAGTGTTCTATGTCCTGATATTTTACCCTGTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR GCA 90 bp | GACCGAAAAGCTGAATTTACTGTTCTGGAATGCTATTCTTTACCCTaGTTTCCTGTTATTAGTTCTCACACTATCACCCCTACAGCCCAG | + |
Preference number: 1 (lower is better) Translates to: DRKAEFTVLECYSLP*FPVISSHTITPTAQ Trigger: CTGGGCTGTAGGGGTGATAGTGTGAGAACTAATAACAGGAAAGCAGGGTAAAGAATAGCATTCCAGAACAGTAAATTCAGCTTTTCGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR TCA 90 bp | AAGACCTATGGTGAAAAATGTGTTTTAAGAAACATCTCCTCAGGATaGGCAAACATTTCTGCTTACAAGAAACCAAGGTGTTCTCTCACC | + |
Preference number: 1 (lower is better) Translates to: KTYGEKCVLRNISSG*ANISAYKKPRCSLT Trigger: GGTGAGAGAACACCTTGGTTTCTTGTAAGCAGAAATGTTTGCTCATCCTGAGGAGATGTTTCTTAAAACACATTTTTCACCATAGGTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR CCA 90 bp | CAGGCACTCAGCACTGAAACCCCAGAAGCCCTTGGTCACACAGAGGGAATGGCAAGACTTTGGCTAGGCTaGACTGAAGGGGTGCTGGAA | + |
Preference number: 2 (lower is better) Translates to: QALSTETPEALGHTEGMARLWLG*TEGVLE Trigger: TTCCAGCACCCCTTCAGTCCAGCCTAGCCAAAGTCT...TGCCATTCCCTCTGTGTGACCAAGGGCTTCTGGGGTTTCAGTGCTGAGTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR TCA 90 bp | ATTGGAAACTGTCCAGTTGTTCCCTCTGAATTGGGAAGTGGTCCCTGCTGTCCCACCAGCTGCCTTCCCTaGAGCTCCATTGTATGCTCT | + |
Preference number: 2 (lower is better) Translates to: IGNCPVVPSELGSGPCCPTSCLP*SSIVCS Trigger: AGAGCATACAATGGAGCTTCAGGGAAGGCAGCTGGT...GGGACAGCAGGGACCACTTCCCAATTCAGAGGGAACAACTGGACAGTTTCCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR CCA 90 bp | ATTGGAAACTGTCCAGTTGTTCCCTCTGAATTGGGAAGTGGTCCCTGCTGTCCCGGACTGAAGGGGTGCTaGAACTGTTTTGGCCTTGTC | + |
Preference number: 2 (lower is better) Translates to: IGNCPVVPSELGSGPCCPGLKGC*NCFGLV Trigger: GACAAGGCCAAAACAGTTCCAGCACCCCTTCAGTCC...GGGACAGCAGGGACCACTTCCCAATTCAGAGGGAACAACTGGACAGTTTCCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR GCA 90 bp | AATAAAATTGGAAACTGTCCAGTTGTTCCCTCTGAATTGGGAAGTGGTCCCTGCTGCACGCGCACAGGCTaGCATCAGAGGGCTCCTTAC | + |
Preference number: 2 (lower is better) Translates to: NKIGNCPVVPSELGSGPCCTRTG*HQRAPY Trigger: GTAAGGAGCCCTCTGATGGCAGCCTGTGCGCGTGCA...GCAGGGACCACTTCCCAATTCAGAGGGAACAACTGGACAGTTTCCAATTTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR CCA 90 bp | CTGCTGGGTGCCAGTGCGCGAGACAGAGCCGCTCAACACCCAACCTCCAAACCTCTGAATTTACTGTTCTaGAATGCTATTCTTTACCCT | + |
Preference number: 2 (lower is better) Translates to: LLGASARDRAAQHPTSKPLNLLF*NAILYP Trigger: AGGGTAAAGAATAGCATTCCAGAACAGTAAATTCAG...AGGTTTGGAGGTTGGGTGTTGAGCGGCTCTGTCTCGCGCACTGGCACCCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR CCA 90 bp | ACAGCAAGACCCAGTCCGGAACTAGAGGGTAACAGTCAGCAGGGGCCTTCTGAGGGAACTGAGCTGAAATaGAATGTGAACTTCAGGTCA | + |
Preference number: 2 (lower is better) Translates to: TARPSPELEGNSQQGPSEGTELK*NVNFRS Trigger: TGACCTGAAGTTCACATTCCATTTCAGCTCAGTTCC...CTCAGAAGGCCCCTGCTGACTGTTACCCTCTAGTTCCGGACTGGGTCTTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR TCA 90 bp | ACAGCAAGACCCAGTCCGGAACTAGAGGGTAACAGTCAGCAGGGGCCTTCTGAGCCTGGTGGAGTGAACTaGAATGCTGTATTTTGTATA | + |
Preference number: 2 (lower is better) Translates to: TARPSPELEGNSQQGPSEPGGVN*NAVFCI Trigger: TATACAAAATACAGCATTTCAGTTCACTCCACCAGG...CTCAGAAGGCCCCTGCTGACTGTTACCCTCTAGTTCCGGACTGGGTCTTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR TCA 90 bp | ACAGCAAGACCCAGTCCGGAACTAGAGGGTAACAGTCAGCAGGGGCCTTCTGAGATTCTCCTGGTGGAGTaGACTGAAATGCTGTATTTT | + |
Preference number: 2 (lower is better) Translates to: TARPSPELEGNSQQGPSEILLVE*TEMLYF Trigger: AAAATACAGCATTTCAGTTCACTCCACCAGGAGAAT...CTCAGAAGGCCCCTGCTGACTGTTACCCTCTAGTTCCGGACTGGGTCTTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR GCA 90 bp | CAGGCACTCAGCACTGAAACCCCAGAAGCCCTTGGTCACACAGAGGGAATGGCAGTCCTGGCCCATATTTaGATAGTGTTTAACAGTTGT | + |
Preference number: 2 (lower is better) Translates to: QALSTETPEALGHTEGMAVLAHI*IVFNSC Trigger: ACAACTGTTAAACACTATGCAAATATGGGCCAGGAC...TGCCATTCCCTCTGTGTGACCAAGGGCTTCTGGGGTTTCAGTGCTGAGTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR GCA 90 bp | AACGGTGACTTTCAGGGGTATTGCTTCAATGCTGCATTCCAAGCAGGAGTCTCAGGTAAGAGTAGAAAGTaGCAGCTGTCTGGGGACACT | + |
Preference number: 2 (lower is better) Translates to: NGDFQGYCFNAAFQAGVSGKSRK*QLSGDT Trigger: AGTGTCCCCAGACAGCTGGCACTTTCTACTCTTACC...TGAGACTCCTGCTTGGAATGCAGCATTGAAGCAATACCCCTGAAAGTCACCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR GCA 90 bp | ACAGCAAGACCCAGTCCGGAACTAGAGGGTAACAGTCAGCAGGGGCCTTCTGAGTGCTATTCTTTACCCTaGTTTCCTGTTATTAGTTCT | + |
Preference number: 2 (lower is better) Translates to: TARPSPELEGNSQQGPSECYSLP*FPVISS Trigger: AGAACTAATAACAGGAAAGCAGGGTAAAGAATAGCA...CTCAGAAGGCCCCTGCTGACTGTTACCCTCTAGTTCCGGACTGGGTCTTGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR GCA 90 bp | GCAGCTGTCCAATATGCCACAAGTCGTAGACTTTGGCTAGGCTGGACTGAAGGGTTTACTGTTCTGGAATaGTATTCTTTACCCTGCTTT | + |
Preference number: 2 (lower is better) Translates to: AAVQYATSRRLWLGWTEGFTVLE*YSLPCF Trigger: AAAGCAGGGTAAAGAATAGCATTCCAGAACAGTAAA...CCCTTCAGTCCAGCCTAGCCAAAGTCTACGACTTGTGGCATATTGGACAGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR TCA 90 bp | TACAAGGAGAACAGGGTAAAATATCAGGACATAGAACACTGTCCTAGAGCCTGGGGTCATCATGGCTCCTaGAGAAACTGTAACTTAAGC | + |
Preference number: 2 (lower is better) Translates to: YKENRVKYQDIEHCPRAWGHHGS*RNCNLS Trigger: GCTTAAGTTACAGTTTCTTCAGGAGCCATGATGACC...CCAGGCTCTAGGACAGTGTTCTATGTCCTGATATTTTACCCTGTTCTCCTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR CCA 90 bp | AACGGTGACTTTCAGGGGTATTGCTTCAATGCTGCATTCCAAGCAGGAGTCTCACAAGATACAAAAGTCTaGAGGCCAAAACTTGTGTTC | + |
Preference number: 2 (lower is better) Translates to: NGDFQGYCFNAAFQAGVSQDTKV*RPKLVF Trigger: GAACACAAGTTTTGGCCTCCAGACTTTTGTATCTTG...TGAGACTCCTGCTTGGAATGCAGCATTGAAGCAATACCCCTGAAAGTCACCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR CCA 90 bp | GTAGACACAGCTCACAAAATAAGCAGGAATAAGGGTCAGAAAATCTATTTGCATAACCCCAGAAGCCCTTaGTCACACAGAGGGAATGGC | + |
Preference number: 2 (lower is better) Translates to: VDTAHKISRNKGQKIYLHNPRSP*SHRGNG Trigger: GCCATTCCCTCTGTGTGACCAAGGGCTTCTGGGGTT...ATGCAAATAGATTTTCTGACCCTTATTCCTGCTTATTTTGTGAGCTGTGTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR GCA 90 bp | TGCCTCCTATTCTTTCTCAGTTATGAAGCGTCCTTAACTTTATATAGCAGAATACTGCCAGGACTCAGGTaGCTGAGGCAAAAGACCACA | + |
Preference number: 2 (lower is better) Translates to: CLLFFLSYEASLTLYSRILPGLR*LRQKTT Trigger: TGTGGTCTTTTGCCTCAGGCACCTGAGTCCTGGCAG...TATTCTGCTATATAAAGTTAAGGACGCTTCATAACTGAGAAAGAATAGGAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR TCA 90 bp | TGCCTCCTATTCTTTCTCAGTTATGAAGCGTCCTTAACTTTATATAGCAGAATATCCAGTTGTTCCCTCTaGATTGGGAAGTGGTCCCTG | + |
Preference number: 2 (lower is better) Translates to: CLLFFLSYEASLTLYSRISSCSL*IGKWSL Trigger: CAGGGACCACTTCCCAATTCAGAGGGAACAACTGGA...TATTCTGCTATATAAAGTTAAGGACGCTTCATAACTGAGAAAGAATAGGAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR GCA 90 bp | GTAGACACAGCTCACAAAATAAGCAGGAATAAGGGTCAGAAAATCTATTTGCATGAGAGGCAAGATGCTTaGAGGGAGTCTGGTAAAGTT | + |
Preference number: 2 (lower is better) Translates to: VDTAHKISRNKGQKIYLHERQDA*RESGKV Trigger: AACTTTACCAGACTCCCTGCAAGCATCTTGCCTCTC...ATGCAAATAGATTTTCTGACCCTTATTCCTGCTTATTTTGTGAGCTGTGTCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR CCA 90 bp | CCTACTTCTTGTTATCAAAATGTAGACACAGCTCACAAAATAAGCAGGAATAAGAGGCCTCTAATGCCATaGCATCACGGTCTCTGCAAA | + |
Preference number: 2 (lower is better) Translates to: PTSCYQNVDTAHKISRNKRPLMP*HHGLCK Trigger: TTTGCAGAGACCGTGATGCCATGGCATTAGAGGCCT...CTTATTCCTGCTTATTTTGTGAGCTGTGTCTACATTTTGATAACAAGAAGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR GCA 90 bp | GTAGACACAGCTCACAAAATAAGCAGGAATAAGGGTCAGAAAATCTATTTGCATTGGCATCACGGTCTCTaGAAACCTGAGTTTAAAGTG | + |
Preference number: 2 (lower is better) Translates to: VDTAHKISRNKGQKIYLHWHHGL*KPEFKV Trigger: CACTTTAAACTCAGGTTTGCAGAGACCGTGATGCCA...ATGCAAATAGATTTTCTGACCCTTATTCCTGCTTATTTTGTGAGCTGTGTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR CCA 90 bp | TGCCTCCTATTCTTTCTCAGTTATGAAGCGTCCTTAACTTTATATAGCAGAATAGTAGTATTCTCCTGGTaGAGTGAACTGAAATGCTGT | + |
Preference number: 2 (lower is better) Translates to: CLLFFLSYEASLTLYSRIVVFSW*SELKCC Trigger: ACAGCATTTCAGTTCACTCCACCAGGAGAATACTAC...TATTCTGCTATATAAAGTTAAGGACGCTTCATAACTGAGAAAGAATAGGAGGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAGTCCGCCTGCCTCTaGCTCCTGAGTGCTGGGATTAAAGGCGTGCGTCAC | + |
Preference number: 3 (lower is better) Translates to: PGWPRTQKSACL*LLSAGIKGVRH Trigger: GTGACGCACGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCGGACTTCTGAGTTCGAGGCCAGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR GCA 72 bp | CAGAGGGCTCCTTACCATGCTGAAGATACTGCTGGGTaGCAGTGCGCGAGACAGAGCCGCTCAACACCCAAC | + |
Preference number: 3 (lower is better) Translates to: QRAPYHAEDTAG*QCARQSRSTPN Trigger: GTTGGGTGTTGAGCGGCTCTGTCTCGCGCACTGGCACCCAGCAGTATCTTCAGCATGGTAAGGAGCCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR GCA 72 bp | GCTCCTTACCATGCTGAAGATACTGCTGGGTGCCAGTaGGCGAGACAGAGCCGCTCAACACCCAACCTCCAA | + |
Preference number: 3 (lower is better) Translates to: APYHAEDTAGCQ*ARQSRSTPNLQ Trigger: TTGGAGGTTGGGTGTTGAGCGGCTCTGTCTCGCGCACTGGCACCCAGCAGTATCTTCAGCATGGTAAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR CCA 72 bp | CTGAAACCCCAGAAGCCCTTGGTCACACAGAGGGAATaGCACAGAGGAACTGCAAGCCTCAGCATCCAACTC | + |
Preference number: 3 (lower is better) Translates to: LKPQKPLVTQRE*HRGTASLSIQL Trigger: GAGTTGGATGCTGAGGCTTGCAGTTCCTCTGTGCCATTCCCTCTGTGTGACCAAGGGCTTCTGGGGTTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR GCA 72 bp | GTAAGCATCAGTCTAAGAAGACAAGAAAGCCCCGCTTaGCGTCACAAAGGACTCACCCCTTGCCCTCTGTGC | + |
Preference number: 3 (lower is better) Translates to: VSISLRRQESPA*RHKGLTPCPLC Trigger: GCACAGAGGGCAAGGGGTGAGTCCTTTGTGACGGCAAGCGGGGCTTTCTTGTCTTCTTAGACTGATGCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR GCA 72 bp | TGTCCAGTTGTTCCCTCTGAATTGGGAAGTGGTCCCTaGTGTCCCACCTCAGCAGCTGTCCAATATGCCACA | + |
Preference number: 3 (lower is better) Translates to: CPVVPSELGSGP*CPTSAAVQYAT Trigger: TGTGGCATATTGGACAGCTGCTGAGGTGGGACAGCAGGGACCACTTCCCAATTCAGAGGGAACAACTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR CCA 72 bp | TGGCTAGGCTGGACTGAAGGGGTGCTGGAACTGTTTTaGCCTTGTCAACCCGCTCCTGTAAACAGTAATGCA | + |
Preference number: 3 (lower is better) Translates to: WLGWTEGVLELF*PCQPAPVNSNA Trigger: TGCATTACTGTTTACAGGAGCGGGTTGACAAGGCCAAAACAGTTCCAGCACCCCTTCAGTCCAGCCTAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR CAA 90 bp | AACGGTGACTTTCAGGGGTATTGCTTCAATGCTGCATTCCAAGCAGGAGTCTCACAAAGGACTCACCCCTaGCCCTCTGTGCTGCTCTCT | + |
Preference number: 3 (lower is better) Translates to: NGDFQGYCFNAAFQAGVSQRTHP*PSVLLS Trigger: AGAGAGCAGCACAGAGGGCAAGGGGTGAGTCCTTTG...TGAGACTCCTGCTTGGAATGCAGCATTGAAGCAATACCCCTGAAAGTCACCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR CAA 90 bp | CAGGCACTCAGCACTGAAACCCCAGAAGCCCTTGGTCACACAGAGGGAATGGCATTCCCTGAAGCTCCATaGTATGCTCTGAGAGTAAGA | + |
Preference number: 3 (lower is better) Translates to: QALSTETPEALGHTEGMAFPEAP*YALRVR Trigger: TCTTACTCTCAGAGCATACAATGGAGCTTCAGGGAA...TGCCATTCCCTCTGTGTGACCAAGGGCTTCTGGGGTTTCAGTGCTGAGTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR CCA 72 bp | GTCCAATATGCCACAAGTCGTAGACTTTGGCTAGGCTaGACTGAAGGGGTGCTGGAACTGTTTTGGCCTTGT | + |
Preference number: 3 (lower is better) Translates to: VQYATSRRLWLG*TEGVLELFWPC Trigger: ACAAGGCCAAAACAGTTCCAGCACCCCTTCAGTCCAGCCTAGCCAAAGTCTACGACTTGTGGCATATTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR TCA 72 bp | GCGAGACAGAGCCGCTCAACACCCAACCTCCAAACCTaGCCCTCTTTTAATAGTAGAAGTACACAACCAGCT | + |
Preference number: 3 (lower is better) Translates to: ARQSRSTPNLQT*PSFNSRSTQPA Trigger: AGCTGGTTGTGTACTTCTACTATTAAAAGAGGGTCAGGTTTGGAGGTTGGGTGTTGAGCGGCTCTGTCTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR CCA 72 bp | ATAAAATTGGAAACTGTCCAGTTGTTCCCTCTGAATTaGGAAGTGGTCCCTGCTGTCCCACCTCAGCAGCTG | + |
Preference number: 3 (lower is better) Translates to: IKLETVQLFPLN*EVVPAVPPQQL Trigger: CAGCTGCTGAGGTGGGACAGCAGGGACCACTTCCCAATTCAGAGGGAACAACTGGACAGTTTCCAATTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR GCA 72 bp | ACCTCAACTGGGATGAACGGTGACTTTCAGGGGTATTaGTTCAATGCTGCATTCCAAGCAGGAGTCTCAAGA | + |
Preference number: 3 (lower is better) Translates to: TSTGMNGDFQGY*FNAAFQAGVSR Trigger: TCTTGAGACTCCTGCTTGGAATGCAGCATTGAAGCAATACCCCTGAAAGTCACCGTTCATCCCAGTTGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR CAA 90 bp | GTAGACACAGCTCACAAAATAAGCAGGAATAAGGGTCAGAAAATCTATTTGCATGGTGCTGGAACTGTTTaGGCCTTGTCAACCCGCTCC | + |
Preference number: 3 (lower is better) Translates to: VDTAHKISRNKGQKIYLHGAGTV*ALSTRS Trigger: GGAGCGGGTTGACAAGGCCAAAACAGTTCCAGCACC...ATGCAAATAGATTTTCTGACCCTTATTCCTGCTTATTTTGTGAGCTGTGTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR TCA 72 bp | CCAACTGTAGTTTTCTACCTCAACTGGGATGAACGGTaGCTTTCAGGGGTATTGCTTCAATGCTGCATTCCA | + |
Preference number: 3 (lower is better) Translates to: PTVVFYLNWDER*LSGVLLQCCIP Trigger: TGGAATGCAGCATTGAAGCAATACCCCTGAAAGTCACCGTTCATCCCAGTTGAGGTAGAAAACTACAGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR-3UTR CAA 90 bp | CCTACTTCTTGTTATCAAAATGTAGACACAGCTCACAAAATAAGCAGGAATAAGCATCTGAGGCACTTGTaGCAGGCTCGCCCATGGAAC | + |
Preference number: 3 (lower is better) Translates to: PTSCYQNVDTAHKISRNKHLRHL*QARPWN Trigger: GTTCCATGGGCGAGCCTGCAACAAGTGCCTCAGATG...CTTATTCCTGCTTATTTTGTGAGCTGTGTCTACATTTTGATAACAAGAAGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR GCA 72 bp | ACAGCCCAGAAAATCAAAGGTGTCCTGGCCCATATTTaGATAGTGTTTAACAGTTGTAGAGATGGCCTCATG | + |
Preference number: 3 (lower is better) Translates to: TAQKIKGVLAHI*IVFNSCRDGLM Trigger: CATGAGGCCATCTCTACAACTGTTAAACACTATGCAAATATGGGCCAGGACACCTTTGATTTTCTGGGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR TCA 72 bp | CTTCAGAAGAAAAGGAAAGCTTACTCCAAACTTTTGTaGATCAGGGTGTTGAGGCCTCTAATGCCATGGCAT | + |
Preference number: 3 (lower is better) Translates to: LQKKRKAYSKLL*IRVLRPLMPWH Trigger: ATGCCATGGCATTAGAGGCCTCAACACCCTGATTCACAAAAGTTTGGAGTAAGCTTTCCTTTTCTTCTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR GCA 72 bp | GCTGAATTTACTGTTCTGGAATGCTATTCTTTACCCTaGTTTCCTGTTATTAGTTCTCACACTATCACCCCT | + |
Preference number: 3 (lower is better) Translates to: AEFTVLECYSLP*FPVISSHTITP Trigger: AGGGGTGATAGTGTGAGAACTAATAACAGGAAAGCAGGGTAAAGAATAGCATTCCAGAACAGTAAATTCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR TCA 72 bp | AAAGTTAACACACAGGCACGCTGTGCTGATGTGACATaGATAAAAACAGTATTCTCACATCAAGTTCATCTG | + |
Preference number: 3 (lower is better) Translates to: KVNTQARCADVT*IKTVFSHQVHL Trigger: CAGATGAACTTGATGTGAGAATACTGTTTTTATTCATGTCACATCAGCACAGCGTGCCTGTGTGTTAACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR GCA 72 bp | TTTAAGAAACATCTCCTCAGGATGAGCAAACATTTCTaGTTACAAGAAACCAAGGTGTTCTCTCACCTACTT | + |
Preference number: 3 (lower is better) Translates to: FKKHLLRMSKHF*LQETKVFSHLL Trigger: AAGTAGGTGAGAGAACACCTTGGTTTCTTGTAAGCAGAAATGTTTGCTCATCCTGAGGAGATGTTTCTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR CCA 72 bp | GATGGGAGAATGACCGAAAAGCTGAATTTACTGTTCTaGAATGCTATTCTTTACCCTGCTTTCCTGTTATTA | + |
Preference number: 3 (lower is better) Translates to: DGRMTEKLNLLF*NAILYPAFLLL Trigger: TAATAACAGGAAAGCAGGGTAAAGAATAGCATTCCAGAACAGTAAATTCAGCTTTTCGGTCATTCTCCCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR GCA 72 bp | GAGAATGACCGAAAAGCTGAATTTACTGTTCTGGAATaGTATTCTTTACCCTGCTTTCCTGTTATTAGTTCT | + |
Preference number: 3 (lower is better) Translates to: ENDRKAEFTVLE*YSLPCFPVISS Trigger: AGAACTAATAACAGGAAAGCAGGGTAAAGAATAGCATTCCAGAACAGTAAATTCAGCTTTTCGGTCATTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR TCA 72 bp | GATAAGAAAGACACAAAGCATCTTCTAGCAAAAGTATaGATATTAACTGTGGTCTTCAGCAAGACACATTTC | + |
Preference number: 3 (lower is better) Translates to: DKKDTKHLLAKV*ILTVVFSKTHF Trigger: GAAATGTGTCTTGCTGAAGACCACAGTTAATATTCATACTTTTGCTAGAAGATGCTTTGTGTCTTTCTTATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR TCA 90 bp | ACAGCAAGACCCAGTCCGGAACTAGAGGGTAACAGTCAGCAGGGGCCTTCTGAGAGGTGCCTGCACAGTTaGCCAGCATGTCCACAGGAC | + |
Preference number: 4 (lower is better) Translates to: TARPSPELEGNSQQGPSERCLHS*PACPQD Trigger: GTCCTGTGGACATGCTGGTCAACTGTGCAGGCACCT...CTCAGAAGGCCCCTGCTGACTGTTACCCTCTAGTTCCGGACTGGGTCTTGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR TCA 90 bp | CAGGCACTCAGCACTGAAACCCCAGAAGCCCTTGGTCACACAGAGGGAATGGCAGTGGGTAGGCCACAGTaGCGTACACATTGTACGGCT | + |
Preference number: 4 (lower is better) Translates to: QALSTETPEALGHTEGMAVGRPQ*RTHCTA Trigger: AGCCGTACAATGTGTACGTCACTGTGGCCTACCCAC...TGCCATTCCCTCTGTGTGACCAAGGGCTTCTGGGGTTTCAGTGCTGAGTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR GCA 90 bp | ACAGCAAGACCCAGTCCGGAACTAGAGGGTAACAGTCAGCAGGGGCCTTCTGAGACACAAACACGATCCTaGCCACCCGTCGCTCCTTCA | + |
Preference number: 4 (lower is better) Translates to: TARPSPELEGNSQQGPSETQTRS*PPVAPS Trigger: TGAAGGAGCGACGGGTGGGCAGGATCGTGTTTGTGT...CTCAGAAGGCCCCTGCTGACTGTTACCCTCTAGTTCCGGACTGGGTCTTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR TCA 90 bp | GCAGCTGTCCAATATGCCACAAGTCGTAGACTTTGGCTAGGCTGGACTGAAGGGCCCAGCTGTCCTGCCTaGGAGGACACAAACACGATC | + |
Preference number: 4 (lower is better) Translates to: AAVQYATSRRLWLGWTEGPSCPA*EDTNTI Trigger: GATCGTGTTTGTGTCCTCTCAGGCAGGACAGCTGGG...CCCTTCAGTCCAGCCTAGCCAAAGTCTACGACTTGTGGCATATTGGACAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR TCA 90 bp | GCAGCTGTCCAATATGCCACAAGTCGTAGACTTTGGCTAGGCTGGACTGAAGGGGGAAAAGGCCCATGGTaGCCACCTGCTGGAGTCCTT | + |
Preference number: 4 (lower is better) Translates to: AAVQYATSRRLWLGWTEGGKGPW*PPAGVL Trigger: AAGGACTCCAGCAGGTGGTCACCATGGGCCTTTTCC...CCCTTCAGTCCAGCCTAGCCAAAGTCTACGACTTGTGGCATATTGGACAGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR GCA 90 bp | ACAGCAAGACCCAGTCCGGAACTAGAGGGTAACAGTCAGCAGGGGCCTTCTGAGCATGGTAGTGATTACTaGCCTGCTGGGGTACACGCT | + |
Preference number: 4 (lower is better) Translates to: TARPSPELEGNSQQGPSEHGSDY*PAGVHA Trigger: AGCGTGTACCCCAGCAGGGCAGTAATCACTACCATG...CTCAGAAGGCCCCTGCTGACTGTTACCCTCTAGTTCCGGACTGGGTCTTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR TCA 90 bp | CAGGCACTCAGCACTGAAACCCCAGAAGCCCTTGGTCACACAGAGGGAATGGCACTCTTCAAACTTTCCTaGCATAGAGGTGCCTGCACA | + |
Preference number: 4 (lower is better) Translates to: QALSTETPEALGHTEGMALFKLS*HRGACT Trigger: TGTGCAGGCACCTCTATGTCAGGAAAGTTTGAAGAG...TGCCATTCCCTCTGTGTGACCAAGGGCTTCTGGGGTTTCAGTGCTGAGTGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR CCA 90 bp | ACAGCAAGACCCAGTCCGGAACTAGAGGGTAACAGTCAGCAGGGGCCTTCTGAGTTTGGCCACCTGCTCTaGTTTGCAAATAGCTGTGGT | + |
Preference number: 4 (lower is better) Translates to: TARPSPELEGNSQQGPSEFGHLL*FANSCG Trigger: ACCACAGCTATTTGCAAACCAGAGCAGGTGGCCAAA...CTCAGAAGGCCCCTGCTGACTGTTACCCTCTAGTTCCGGACTGGGTCTTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR CAA 72 bp | TGTAAGCATCAGTCTAAGAAGACAAGAAAGCCCCGCTaGCCGTCACAAAGGACTCACCCCTTGCCCTCTGTG | + |
Preference number: 4 (lower is better) Translates to: CKHQSKKTRKPR*PSQRTHPLPSV Trigger: CACAGAGGGCAAGGGGTGAGTCCTTTGTGACGGCAAGCGGGGCTTTCTTGTCTTCTTAGACTGATGCTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR CCA 90 bp | GCAGCTGTCCAATATGCCACAAGTCGTAGACTTTGGCTAGGCTGGACTGAAGGGATGGTGACCACCTGCTaGAGTCCTTCAGTGATGGAA | + |
Preference number: 4 (lower is better) Translates to: AAVQYATSRRLWLGWTEGMVTTC*SPSVME Trigger: TTCCATCACTGAAGGACTCCAGCAGGTGGTCACCAT...CCCTTCAGTCCAGCCTAGCCAAAGTCTACGACTTGTGGCATATTGGACAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR GCA 90 bp | ACAGCAAGACCCAGTCCGGAACTAGAGGGTAACAGTCAGCAGGGGCCTTCTGAGATTTGTTTGGCCACCTaGTCTGGTTTGCAAATAGCT | + |
Preference number: 4 (lower is better) Translates to: TARPSPELEGNSQQGPSEICLAT*SGLQIA Trigger: AGCTATTTGCAAACCAGAGCAGGTGGCCAAACAAAT...CTCAGAAGGCCCCTGCTGACTGTTACCCTCTAGTTCCGGACTGGGTCTTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR TCA 90 bp | TACAAAAGTCTGGAGGCCAAAACTTGTGTTCCATTAGCAGCACACTGTTCAAATGCTGGAGTCCTTCAGTaGTGGAAGTCACCGGGGCCA | + |
Preference number: 4 (lower is better) Translates to: YKSLEAKTCVPLAAHCSNAGVLQ*WKSPGP Trigger: TGGCCCCGGTGACTTCCATCACTGAAGGACTCCAGC...ATTTGAACAGTGTGCTGCTAATGGAACACAAGTTTTGGCCTCCAGACTTTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR GCA 90 bp | AATAAAATTGGAAACTGTCCAGTTGTTCCCTCTGAATTGGGAAGTGGTCCCTGCCAGTCCCAGCTGTCCTaGCTGAGAGGACACAAACAC | + |
Preference number: 4 (lower is better) Translates to: NKIGNCPVVPSELGSGPCQSQLS*LRGHKH Trigger: GTGTTTGTGTCCTCTCAGGCAGGACAGCTGGGACTG...GCAGGGACCACTTCCCAATTCAGAGGGAACAACTGGACAGTTTCCAATTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR GCA 90 bp | TACAAGGAGAACAGGGTAAAATATCAGGACATAGAACACTGTCCTAGAGCCTGGCCCATGGTGACCACCTaGTGGAGTCCTTCAGTGATG | + |
Preference number: 4 (lower is better) Translates to: YKENRVKYQDIEHCPRAWPMVTT*WSPSVM Trigger: CATCACTGAAGGACTCCAGCAGGTGGTCACCATGGG...CCAGGCTCTAGGACAGTGTTCTATGTCCTGATATTTTACCCTGTTCTCCTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR CAA 72 bp | AATAAAATTGGAAACTGTCCAGTTGTTCCCTCTGAATaGGGAAGTGGTCCCTGCTGTCCCACCTCAGCAGCT | + |
Preference number: 4 (lower is better) Translates to: NKIGNCPVVPSE*GSGPCCPTSAA Trigger: AGCTGCTGAGGTGGGACAGCAGGGACCACTTCCCAATTCAGAGGGAACAACTGGACAGTTTCCAATTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR TCA 90 bp | TCTCACACTATCACCCCTACAGCCCAGAAAATCAAAGGTGTCCTGGCCCATATTTTGAGACACATCAACTaGGATACACAGCACCACCTG | + |
Preference number: 4 (lower is better) Translates to: SHTITPTAQKIKGVLAHILRHIN*DTQHHL Trigger: CAGGTGGTGCTGTGTATCTCAGTTGATGTGTCTCAA...AATATGGGCCAGGACACCTTTGATTTTCTGGGCTGTAGGGGTGATAGTGTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR GCA 90 bp | GCAGCTGTCCAATATGCCACAAGTCGTAGACTTTGGCTAGGCTGGACTGAAGGGAACCAGAGTTATAAATaGTCCTTGTTTGTAGCACTC | + |
Preference number: 4 (lower is better) Translates to: AAVQYATSRRLWLGWTEGNQSYK*SLFVAL Trigger: GAGTGCTACAAACAAGGAGCATTTATAACTCTGGTT...CCCTTCAGTCCAGCCTAGCCAAAGTCTACGACTTGTGGCATATTGGACAGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR GCA 90 bp | ATTGGAAACTGTCCAGTTGTTCCCTCTGAATTGGGAAGTGGTCCCTGCTGTCCCCTTGTCCTCATTTCGTaGAACCAGAGTTATAAATGC | + |
Preference number: 4 (lower is better) Translates to: IGNCPVVPSELGSGPCCPLVLIS*NQSYKC Trigger: GCATTTATAACTCTGGTTGCACGAAATGAGGACAAG...GGGACAGCAGGGACCACTTCCCAATTCAGAGGGAACAACTGGACAGTTTCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR GCA 90 bp | AACGGTGACTTTCAGGGGTATTGCTTCAATGCTGCATTCCAAGCAGGAGTCTCAACCCAGCTTCTCTTGTaGCTGCTTTATGACATTCTC | + |
Preference number: 4 (lower is better) Translates to: NGDFQGYCFNAAFQAGVSTQLLL*LLYDIL Trigger: GAGAATGTCATAAAGCAGGCACAAGAGAAGCTGGGT...TGAGACTCCTGCTTGGAATGCAGCATTGAAGCAATACCCCTGAAAGTCACCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR TCA 90 bp | AACGGTGACTTTCAGGGGTATTGCTTCAATGCTGCATTCCAAGCAGGAGTCTCACTTGTATGGCATCTTTaGCAATTTGTTTGGCCACCT | + |
Preference number: 4 (lower is better) Translates to: NGDFQGYCFNAAFQAGVSLVWHL*QFVWPP Trigger: AGGTGGCCAAACAAATTGTCAAAGATGCCATACAAG...TGAGACTCCTGCTTGGAATGCAGCATTGAAGCAATACCCCTGAAAGTCACCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
3UTR CAA 72 bp | AGAAGTACACAACCAGCTGCCTTCCCTGAAGCTCCATaGTATGCTCTGAGAGTAAGAAGGTCATGCTTTTCA | + |
Preference number: 4 (lower is better) Translates to: RSTQPAAFPEAP*YALRVRRSCFS Trigger: TGAAAAGCATGACCTTCTTACTCTCAGAGCATACAATGGAGCTTCAGGGAAGGCAGCTGGTTGTGTACTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR GCA 90 bp | TACAAAAGTCTGGAGGCCAAAACTTGTGTTCCATTAGCAGCACACTGTTCAAATTGCTGGGGTACACGCTaGCCAGGTAATTTATGCTCA | + |
Preference number: 4 (lower is better) Translates to: YKSLEAKTCVPLAAHCSNCWGTR*PGNLCS Trigger: TGAGCATAAATTACCTGGGCAGCGTGTACCCCAGCA...ATTTGAACAGTGTGCTGCTAATGGAACACAAGTTTTGGCCTCCAGACTTTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR GCA 90 bp | AATAAAATTGGAAACTGTCCAGTTGTTCCCTCTGAATTGGGAAGTGGTCCCTGCCATCTGCAGAGCTTCTaGCAATCCTCTTATGGCAAA | + |
Preference number: 4 (lower is better) Translates to: NKIGNCPVVPSELGSGPCHLQSF*QSSYGK Trigger: TTTGCCATAAGAGGATTGGCAGAAGCTCTGCAGATG...GCAGGGACCACTTCCCAATTCAGAGGGAACAACTGGACAGTTTCCAATTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR TCA 90 bp | CCTACTTCTTGTTATCAAAATGTAGACACAGCTCACAAAATAAGCAGGAATAAGAATAGCTGTGGTCTCTaGGATAAGCCGGGTCTCCAG | + |
Preference number: 4 (lower is better) Translates to: PTSCYQNVDTAHKISRNKNSCGL*DKPGLQ Trigger: CTGGAGACCCGGCTTATCTCAGAGACCACAGCTATT...CTTATTCCTGCTTATTTTGTGAGCTGTGTCTACATTTTGATAACAAGAAGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR TCA 90 bp | TACAAAAGTCTGGAGGCCAAAACTTGTGTTCCATTAGCAGCACACTGTTCAAATCAGCATGTACCCATCTaGGCCAATAGAACTGTTAAA | + |
Preference number: 4 (lower is better) Translates to: YKSLEAKTCVPLAAHCSNQHVPI*ANRTVK Trigger: TTTAACAGTTCTATTGGCTCAGATGGGTACATGCTG...ATTTGAACAGTGTGCTGCTAATGGAACACAAGTTTTGGCCTCCAGACTTTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR TCA 90 bp | CCTACTTCTTGTTATCAAAATGTAGACACAGCTCACAAAATAAGCAGGAATAAGTATGGCAAACTTGGATaGAGAGTAGGCCGTGAAACC | + |
Preference number: 4 (lower is better) Translates to: PTSCYQNVDTAHKISRNKYGKLG*RVGRET Trigger: GGTTTCACGGCCTACTCTTCATCCAAGTTTGCCATA...CTTATTCCTGCTTATTTTGTGAGCTGTGTCTACATTTTGATAACAAGAAGTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR CCA 90 bp | GTAGACACAGCTCACAAAATAAGCAGGAATAAGGGTCAGAAAATCTATTTGCATCTGCCAATCCTCTTATaGCAAACTTGGATGAAGAGT | + |
Preference number: 4 (lower is better) Translates to: VDTAHKISRNKGQKIYLHLPILL*QTWMKS Trigger: ACTCTTCATCCAAGTTTGCCATAAGAGGATTGGCAG...ATGCAAATAGATTTTCTGACCCTTATTCCTGCTTATTTTGTGAGCTGTGTCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR GCA 90 bp | TGCCTCCTATTCTTTCTCAGTTATGAAGCGTCCTTAACTTTATATAGCAGAATAAGCTTCTCTTGTGCCTaGTTTATGACATTCTCCACT | + |
Preference number: 4 (lower is better) Translates to: CLLFFLSYEASLTLYSRISFSCA*FMTFST Trigger: AGTGGAGAATGTCATAAAGCAGGCACAAGAGAAGCT...TATTCTGCTATATAAAGTTAAGGACGCTTCATAACTGAGAAAGAATAGGAGGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS TCA 90 bp | CCTCAGCCAGCCCCGGCGTGTCGGTGTCTGGTGGGTAGGCCACAGTaGCGTACACATTGTACGGCTTCACCTCCATCTGCAGAGCTTCTG | + |
Preference number: 5 (lower is better) Translates to: PQPAPACRCLVGRPQ*RTHCTASPPSAELL Trigger: CAGAAGCTCTGCAGATGGAGGTGAAGCCGTACAATGTGTACGTCACTGTGGCCTACCCACCAGACACCGACACGCCGGGGCTGGCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR CAA 90 bp | GCAGCTGTCCAATATGCCACAAGTCGTAGACTTTGGCTAGGCTGGACTGAAGGGGGCAGCGCGAGGGGCTaGGGACTGATGAGCGGCGAC | + |
Preference number: 5 (lower is better) Translates to: AAVQYATSRRLWLGWTEGGSARG*GLMSGD Trigger: GTCGCCGCTCATCAGTCCCAAGCCCCTCGCGCTGCC...CCCTTCAGTCCAGCCTAGCCAAAGTCTACGACTTGTGGCATATTGGACAGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR CAA 90 bp | ACAGCAAGACCCAGTCCGGAACTAGAGGGTAACAGTCAGCAGGGGCCTTCTGAGGAGGTGCCTGCACAGTaGACCAGCATGTCCACAGGA | + |
Preference number: 5 (lower is better) Translates to: TARPSPELEGNSQQGPSEEVPAQ*TSMSTG Trigger: TCCTGTGGACATGCTGGTCAACTGTGCAGGCACCTC...CTCAGAAGGCCCCTGCTGACTGTTACCCTCTAGTTCCGGACTGGGTCTTGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS TCA 90 bp | CTTCTGCCAATCCTCTTATGGCAAACTTGGATGAAGAGTAGGCCGTaGAACCAAACAGTCCCAGCTGTCCTGCCTGAGAGGACACAAACA | + |
Preference number: 5 (lower is better) Translates to: LLPILLWQTWMKSRP*NQTVPAVLPERTQT Trigger: TGTTTGTGTCCTCTCAGGCAGGACAGCTGGGACTGTTTGGTTTCACGGCCTACTCTTCATCCAAGTTTGCCATAAGAGGATTGGCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS TCA 90 bp | CACCGGGGCCATCCCACAGGTCAGGGAGGACAGCATGTACCCATCTaGGCCAATAGAACTGTTAAAATTTCCTTGTATGGCATCTTTGAC | + |
Preference number: 5 (lower is better) Translates to: HRGHPTGQGGQHVPI*ANRTVKISLYGIFD Trigger: GTCAAAGATGCCATACAAGGAAATTTTAACAGTTCTATTGGCTCAGATGGGTACATGCTGTCCTCCCTGACCTGTGGGATGGCCCCGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR CAA 90 bp | ATTGGAAACTGTCCAGTTGTTCCCTCTGAATTGGGAAGTGGTCCCTGCTGTCCCAGGACCCAGCTTCTCTaGTGCCTGCTTTATGACATT | + |
Preference number: 5 (lower is better) Translates to: IGNCPVVPSELGSGPCCPRTQLL*CLLYDI Trigger: AATGTCATAAAGCAGGCACAAGAGAAGCTGGGTCCT...GGGACAGCAGGGACCACTTCCCAATTCAGAGGGAACAACTGGACAGTTTCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR CAA 90 bp | AACGGTGACTTTCAGGGGTATTGCTTCAATGCTGCATTCCAAGCAGGAGTCTCAGGCATCTTTGACAATTaGTTTGGCCACCTGCTCTGG | + |
Preference number: 5 (lower is better) Translates to: NGDFQGYCFNAAFQAGVSGIFDN*FGHLLW Trigger: CCAGAGCAGGTGGCCAAACAAATTGTCAAAGATGCC...TGAGACTCCTGCTTGGAATGCAGCATTGAAGCAATACCCCTGAAAGTCACCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR CAA 90 bp | GCAGCTGTCCAATATGCCACAAGTCGTAGACTTTGGCTAGGCTGGACTGAAGGGAGTTATAAATGCTCCTaGTTTGTAGCACTCAATAGC | + |
Preference number: 5 (lower is better) Translates to: AAVQYATSRRLWLGWTEGSYKCS*FVALNS Trigger: GCTATTGAGTGCTACAAACAAGGAGCATTTATAACT...CCCTTCAGTCCAGCCTAGCCAAAGTCTACGACTTGTGGCATATTGGACAGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR CAA 90 bp | TACAAGGAGAACAGGGTAAAATATCAGGACATAGAACACTGTCCTAGAGCCTGGGGTAAAACAAGGCAATaGTTCGGAAAAGGCCCATGG | + |
Preference number: 5 (lower is better) Translates to: YKENRVKYQDIEHCPRAWGKTRQ*FGKGPW Trigger: CCATGGGCCTTTTCCGAACAATTGCCTTGTTTTACC...CCAGGCTCTAGGACAGTGTTCTATGTCCTGATATTTTACCCTGTTCTCCTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR CAA 90 bp | GACCCTCTTTTAATAGTAGAAGTACACAACCAGCTGCCTTCCCTGAAGCTCCATCACAGCACCACCTGTTaGTCATTAATAGAGTGCTTT | + |
Preference number: 5 (lower is better) Translates to: DPLLIVEVHNQLPSLKLHHSTTC*SLIECF Trigger: AAAGCACTCTATTAATGACAAACAGGTGGTGCTGTG...ATGGAGCTTCAGGGAAGGCAGCTGGTTGTGTACTTCTACTATTAAAAGAGGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS-3UTR CAA 90 bp | AATAAAATTGGAAACTGTCCAGTTGTTCCCTCTGAATTGGGAAGTGGTCCCTGCCCTTGTATGGCATCTTaGACAATTTGTTTGGCCACC | + |
Preference number: 5 (lower is better) Translates to: NKIGNCPVVPSELGSGPCPCMAS*TICLAT Trigger: GGTGGCCAAACAAATTGTCAAAGATGCCATACAAGG...GCAGGGACCACTTCCCAATTCAGAGGGAACAACTGGACAGTTTCCAATTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS GCA 90 bp | TTAAAATTTCCTTGTATGGCATCTTTGACAATTTGTTTGGCCACCTaGTCTGGTTTGCAAATAGCTGTGGTCTCTGAGATAAGCCGGGTC | + |
Preference number: 5 (lower is better) Translates to: LKFPCMASLTICLAT*SGLQIAVVSEISRV Trigger: GACCCGGCTTATCTCAGAGACCACAGCTATTTGCAAACCAGAGCAGGTGGCCAAACAAATTGTCAAAGATGCCATACAAGGAAATTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS TCA 72 bp | GCCCCGGCGTGTCGGTGTCTGGTGGGTAGGCCACAGTaGCGTACACATTGTACGGCTTCACCTCCATCTGCA | + |
Preference number: 6 (lower is better) Translates to: APACRCLVGRPQ*RTHCTASPPSA Trigger: TGCAGATGGAGGTGAAGCCGTACAATGTGTACGTCACTGTGGCCTACCCACCAGACACCGACACGCCGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS GCA 72 bp | CCTGCCCACCCGTCGCTCCTTCATGGTAGTGATTACTaGCCTGCTGGGGTACACGCTGCCCAGGTAATTTAT | + |
Preference number: 6 (lower is better) Translates to: PAHPSLLHGSDY*PAGVHAAQVIY Trigger: ATAAATTACCTGGGCAGCGTGTACCCCAGCAGGGCAGTAATCACTACCATGAAGGAGCGACGGGTGGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS GCA 72 bp | AAGGCAATTGTTCGGAAAAGGCCCATGGTGACCACCTaGTGGAGTCCTTCAGTGATGGAAGTCACCGGGGCC | + |
Preference number: 6 (lower is better) Translates to: KAIVRKRPMVTT*WSPSVMEVTGA Trigger: GGCCCCGGTGACTTCCATCACTGAAGGACTCCAGCAGGTGGTCACCATGGGCCTTTTCCGAACAATTGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS CCA 72 bp | GCAATTGTTCGGAAAAGGCCCATGGTGACCACCTGCTaGAGTCCTTCAGTGATGGAAGTCACCGGGGCCATC | + |
Preference number: 6 (lower is better) Translates to: AIVRKRPMVTTC*SPSVMEVTGAI Trigger: GATGGCCCCGGTGACTTCCATCACTGAAGGACTCCAGCAGGTGGTCACCATGGGCCTTTTCCGAACAATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS TCA 72 bp | GGCCACCTGCTCTGGTTTGCAAATAGCTGTGGTCTCTaGGATAAGCCGGGTCTCCAGGGGCTTCGTTTTGTT | + |
Preference number: 6 (lower is better) Translates to: GHLLWFANSCGL*DKPGLQGLRFV Trigger: AACAAAACGAAGCCCCTGGAGACCCGGCTTATCTCAGAGACCACAGCTATTTGCAAACCAGAGCAGGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS CAA 90 bp | CCTTGTATGGCATCTTTGACAATTTGTTTGGCCACCTGCTCTGGTTaGCAAATAGCTGTGGTCTCTGAGATAAGCCGGGTCTCCAGGGGC | + |
Preference number: 6 (lower is better) Translates to: PCMASLTICLATCSG*QIAVVSEISRVSRG Trigger: GCCCCTGGAGACCCGGCTTATCTCAGAGACCACAGCTATTTGCAAACCAGAGCAGGTGGCCAAACAAATTGTCAAAGATGCCATACAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS TCA 72 bp | CAGAGCTTCTGCCAATCCTCTTATGGCAAACTTGGATaGAGAGTAGGCCGTGAAACCAAACAGTCCCAGCTG | + |
Preference number: 6 (lower is better) Translates to: QSFCQSSYGKLG*RVGRETKQSQL Trigger: CAGCTGGGACTGTTTGGTTTCACGGCCTACTCTTCATCCAAGTTTGCCATAAGAGGATTGGCAGAAGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS GCA 72 bp | ACAGTGACGTACACATTGTACGGCTTCACCTCCATCTaGAGAGCTTCTGCCAATCCTCTTATGGCAAACTTG | + |
Preference number: 6 (lower is better) Translates to: TVTYTLYGFTSI*RASANPLMANL Trigger: CAAGTTTGCCATAAGAGGATTGGCAGAAGCTCTGCAGATGGAGGTGAAGCCGTACAATGTGTACGTCACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS TCA 72 bp | CATCCCACAGGTCAGGGAGGACAGCATGTACCCATCTaGGCCAATAGAACTGTTAAAATTTCCTTGTATGGC | + |
Preference number: 6 (lower is better) Translates to: HPTGQGGQHVPI*ANRTVKISLYG Trigger: GCCATACAAGGAAATTTTAACAGTTCTATTGGCTCAGATGGGTACATGCTGTCCTCCCTGACCTGTGGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS TCA 72 bp | TGTCCACAGGACCCAGCTTCTCTTGTGCCTGCTTTATaGCATTCTCCACTTGGTTATAGTCTTGAGACACAT | + |
Preference number: 6 (lower is better) Translates to: CPQDPASLVPAL*HSPLGYSLETH Trigger: ATGTGTCTCAAGACTATAACCAAGTGGAGAATGTCATAAAGCAGGCACAAGAGAAGCTGGGTCCTGTGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS GCA 72 bp | GAGATACACAGCACCACCTGTTTGTCATTAATAGAGTaGTTTTCAATGTCTTTCTTCGCCTGCAGTAGCTTG | + |
Preference number: 6 (lower is better) Translates to: EIHSTTCLSLIE*FSMSFFACSSL Trigger: CAAGCTACTGCAGGCGAAGAAAGACATTGAAAAGCACTCTATTAATGACAAACAGGTGGTGCTGTGTATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS CAA 72 bp | GTCCTCATTTCGTGCAACCAGAGTTATAAATGCTCCTaGTTTGTAGCACTCAATAGCAATGCACTTCCCAAT | + |
Preference number: 6 (lower is better) Translates to: VLISCNQSYKCS*FVALNSNALPN Trigger: ATTGGGAAGTGCATTGCTATTGAGTGCTACAAACAAGGAGCATTTATAACTCTGGTTGCACGAAATGAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS TCA 72 bp | ATTCTCCACTTGGTTATAGTCTTGAGACACATCAACTaGGATACACAGCACCACCTGTTTGTCATTAATAGA | + |
Preference number: 6 (lower is better) Translates to: ILHLVIVLRHIN*DTQHHLFVINR Trigger: TCTATTAATGACAAACAGGTGGTGCTGTGTATCTCAGTTGATGTGTCTCAAGACTATAACCAAGTGGAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |
||
CDS CAA 72 bp | CCAATAGAACTGTTAAAATTTCCTTGTATGGCATCTTaGACAATTTGTTTGGCCACCTGCTCTGGTTTGCAA | + |
Preference number: 6 (lower is better) Translates to: PIELLKFPCMAS*TICLATCSGLQ Trigger: TTGCAAACCAGAGCAGGTGGCCAAACAAATTGTCAAAGATGCCATACAAGGAAATTTTAACAGTTCTATTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010049.6 |